BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003531
         (812 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score = 1310 bits (3391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/786 (77%), Positives = 699/786 (88%)

Query: 27  TLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           T S R YIPS +Y+HPSA+LLE+CTS+KEL + +PLIIK+GL  +HLFQTKLVSLFCK+ 
Sbjct: 64  TPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFG 123

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           SL +AARVF+PI DK+D LYHTMLKGYA+ +SLDDAVSF  RMRYD V PVVYN+TYLLK
Sbjct: 124 SLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLK 183

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
           VCGD  ++R+GKEIH QLIVNGF+ ++FAMTGVVNMYAKC  +EEAYKMFDRMPERDLV 
Sbjct: 184 VCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVC 243

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNTI++G+AQNGF + AL+LV RM EEG+R D ITIVSILPAVA+VGSLRIG+++HGY+M
Sbjct: 244 WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 303

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           RAGF+S VNVSTALVDMY+KCG V TARL+FD M  + VVSWNSMI  YV+ G+P  AM 
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           IFQKM+D+ VE TNVT+M ALHACADLGD+E+G FVHKLLDQL+LG+DVS+ NSLISMYS
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 423

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KCK+VD AA+IF  LQ KTLVSWNAMILGYAQNGR+NEA++YFCKM+ +NIKPDSFTMVS
Sbjct: 424 KCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVS 483

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           VIPALAELSV+  AKWIH LVIR+C +KNVFV TAL+DMYAKCGAV TAR LFDMM+ERH
Sbjct: 484 VIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH 543

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           VTTWN MIDGYGTHGLGKAA+ELF KM +   KPN++TFLC +SACSHSGLVEEG  YF 
Sbjct: 544 VTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFG 603

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           S+KKDYG+EP MDHYGAMVDLLGRA RLNEAWDFIQKMPIEP I+VFGAMLGAC+IHKNV
Sbjct: 604 SMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNV 663

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           ELGEKAANR+F+LDPD+GGYHVLLANIYA ASMWDK+A+VRT MEKKG+QKTPG S+VEL
Sbjct: 664 ELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVEL 723

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSE 746
           +NEVH+FYSG+T HPQ+K+IY FLETL + IKAAGY+PDTNS+HDVED V+E LL+SHSE
Sbjct: 724 QNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSE 783

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           KLAIAF LLN+SPG+TIH+RKNLRVCGDCHNATKYISLVT REIIVRDM RFH FK+G C
Sbjct: 784 KLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTC 843

Query: 807 SCGDYW 812
           SCGDYW
Sbjct: 844 SCGDYW 849


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score = 1290 bits (3338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/787 (74%), Positives = 702/787 (89%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           HTLS+RA+IPS +Y+HP+A+LLE+CTS+KEL +I+PL+IK+GL ++HLFQTKLVSLF KY
Sbjct: 35  HTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY 94

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
            S+++AARVFEPI DKLDALYHTMLKGYAK +SL+ A++FL RMRYDDV PVVYN+TYLL
Sbjct: 95  GSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLL 154

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           KVCGD  +++RGKEIHGQLI N F+ ++FAMTGVVNMYAKC QI++AYKMFDRMPERDLV
Sbjct: 155 KVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLV 214

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SWNTI+AGF+QNGFA+ AL+LV RM +EG+R D IT+V++LPA A+VG L +GK++HGYA
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +RAGF  +VN+STAL DMY+KCG VETARL+FDGM  + VVSWNSM+  YV+ G PE+A+
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F+KML++G++PT VTIMEALHACADLGDLERG FVHK +DQL LG+D+S+ NSLISMY
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMY 394

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           SKCK+VD A+DIF+ L G+T VSWNAMILGYAQNGRV+EALN F +M+S  +KPDSFTMV
Sbjct: 395 SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           SVIPALAELSV R+AKWIH L+IRSC +KN+FV TAL+DMY+KCGA+  AR LFDM+++R
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
           HV TWN MIDGYGTHGLG+AA++LF+KM +G  +PNDIT+L  ISACSHSGLV+EG+ +F
Sbjct: 515 HVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHF 574

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
            S+K+DYG+EP MDHYGAMVDLLGRAGR+ EAWDFI+ MPI PGITV+GAMLGACKIHKN
Sbjct: 575 KSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKN 634

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           +E+GEKAA +LFEL+PDEGGYHVLLANIYA+ S W K+A+VR  MEKKGL+KTPGCS+VE
Sbjct: 635 IEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVE 694

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHS 745
           L+NEVHSFYSGST HPQSKRIY FLE L+ EIKAAGYVPDTN I DVED VQE LL+SHS
Sbjct: 695 LRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHS 754

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           EKLAIAFGLLN+SPG+TIH+RKNLRVCGDCHNATKYISLVTGREIIVRDM RFH FKNG+
Sbjct: 755 EKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGI 814

Query: 806 CSCGDYW 812
           CSCGDYW
Sbjct: 815 CSCGDYW 821


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score = 1285 bits (3326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/787 (74%), Positives = 700/787 (88%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           HTLS+RA+IPS +Y+HP+A+LLE+CTS+KEL +I+PL+IK+GL ++HLFQTKLVSLF KY
Sbjct: 35  HTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY 94

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
            S+++AARVFEPI DKLDALYHTMLKGYAK +SL+ A++FL RMRYDDV PVVYN+TYLL
Sbjct: 95  GSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLL 154

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           KVCGD  +++RGKEIHGQLI N F+ ++FAMTGVVNMYAKC QI++AYKMFDRMPERDLV
Sbjct: 155 KVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLV 214

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SWNTI+AGF+QNGFA+ AL+LV RM +EG+R D IT+V++LPA A+VG L +GK++HGYA
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +RAGF  +VN+STAL DMY+KCG VETARL+FDGM  + VVSWNSM+  YV+ G PE+A+
Sbjct: 275 IRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAI 334

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F+KML++G++PT VTIMEALHACADLGDLERG FVHK +DQL LG+D+S+ NSLISMY
Sbjct: 335 AVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMY 394

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           SKCK+VD A+DIF+ L G+T VSWNAMILGYAQNGRV+EALN F +M+S  +KPDSFTMV
Sbjct: 395 SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           SVIPALAELSV R+AKWIH L+IRSC +KN+FV TAL+DMY+KCGA+  AR LFDM+++R
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
           HV TWN MIDGYGTHGLG+AA++LF+KM +G  +PNDIT+L  ISACSHSGLV+EG+ +F
Sbjct: 515 HVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHF 574

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
            S+K+DYG+EP MDHYGAMVDLLGRAGR+ EAWDFI+ MPI PGITV+GA  GACKIHKN
Sbjct: 575 KSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKN 634

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           +E+GEKAA +LFEL+PDEGGYHVLLANIYA+ S W K+A+VR  MEKKGL+KTPGCS+VE
Sbjct: 635 IEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVE 694

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHS 745
           L+NEVHSFYSGST HPQSKRIY FLE L+ EIKAAGYVPDTN I DVED VQE LL+SHS
Sbjct: 695 LRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHS 754

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           EKLAIAFGLLN+SPG+TIH+RKNLRVCGDCHNATKYISLVTGREIIVRDM RFH FKNG+
Sbjct: 755 EKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGI 814

Query: 806 CSCGDYW 812
           CSCGDYW
Sbjct: 815 CSCGDYW 821


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score = 1220 bits (3157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/783 (71%), Positives = 678/783 (86%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           QR +IPS +YRHPSA+LLE+CTSLKEL +ILPLIIK+G  ++HLFQTKL+SLFCK+NS++
Sbjct: 34  QRIFIPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSIT 93

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           +AARVFEP+  KLD LYHTMLKGYAK ++L DAV F  RMR D+V PVVY++TYLL++ G
Sbjct: 94  EAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSG 153

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           +  ++RRG+EIHG +I NGF  +LFAMT VVN+YAKC QIE+AYKMF+RMP+RDLVSWNT
Sbjct: 154 ENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNT 213

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +VAG+AQNGFA  A+ +V +M E G++ D IT+VS+LPAVA++ +LRIG+++HGYA RAG
Sbjct: 214 VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG 273

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           F+ +VNV+TA++D Y KCG V +ARLVF GM SRNVVSWN+MI  Y + G  EEA   F 
Sbjct: 274 FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFL 333

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           KMLD+GVEPTNV++M ALHACA+LGDLERG +VH+LLD+ K+G DVS+ NSLISMYSKCK
Sbjct: 334 KMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK 393

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +VD AA +F  L+ KT+V+WNAMILGYAQNG VNEALN FC+M+S +IKPDSFT+VSVI 
Sbjct: 394 RVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVIT 453

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           ALA+LSV R AKWIH L IR+  +KNVFV TALID +AKCGA+ TAR LFD+M ERHV T
Sbjct: 454 ALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT 513

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN MIDGYGT+G G+ A++LFN+M  G  KPN+ITFL  I+ACSHSGLVEEG++YF S+K
Sbjct: 514 WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMK 573

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           ++YG+EP MDHYGAMVDLLGRAGRL++AW FIQ MP++PGITV GAMLGAC+IHKNVELG
Sbjct: 574 ENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELG 633

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           EK A+ LF+LDPD+GGYHVLLAN+YA+ASMWDK+A+VRT MEKKG+QKTPGCSLVEL+NE
Sbjct: 634 EKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNE 693

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLA 749
           VH+FYSGST HPQSKRIY +LETL DE+KAAGYVPDTNSIHDVE+ V+E LLSSHSE+LA
Sbjct: 694 VHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLA 753

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           IAFGLLN+  G+ IHIRKNLRVCGDCH ATKYISLVTGREIIVRD+ RFH FKNG+CSCG
Sbjct: 754 IAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCG 813

Query: 810 DYW 812
           DYW
Sbjct: 814 DYW 816


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/789 (70%), Positives = 665/789 (84%)

Query: 24  HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
           H+H LS+R YIP+ +Y HP+ALLLE C+SLKELR+ILPL+ K+GL  +H FQTKLVSLFC
Sbjct: 21  HRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC 80

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           +Y S+ +AARVFEPI  KL+ LYHTMLKG+AK + LD A+ F +RMRYDDV PVVYN+TY
Sbjct: 81  RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LLKVCGD  E+R GKEIHG L+ +GFSLDLFAMTG+ NMYAKC Q+ EA K+FDRMPERD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSWNTIVAG++QNG A +AL++V  M EE  +  FITIVS+LPAV+ +  + +GK +HG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           YAMR+GFDS+VN+STALVDMYAKCG +ETAR +FDGM  RNVVSWNSMI AYV+  NP+E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           AM IFQKMLD+GV+PT+V++M ALHACADLGDLERG F+HKL  +L L  +VS+ NSLIS
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KCK+VD AA +F KLQ +TLVSWNAMILG+AQNGR  +ALNYF +MRS+ +KPD+FT
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
            VSVI A+AELS+  +AKWIH +V+RSC +KNVFV TAL+DMYAKCGA+  AR +FDMM+
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           ERHVTTWN MIDGYGTHG GKAA+ELF +M +G  KPN +TFL  ISACSHSGLVE G+ 
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F  +K++Y IE  MDHYGAMVDLLGRAGRLNEAWDFI +MP++P + V+GAMLGAC+IH
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           KNV   EKAA RLFEL+PD+GGYHVLLANIY AASMW+K+ +VR  M ++GL+KTPGCS+
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSS 743
           VE+KNEVHSF+SGST HP SK+IY FLE LI  IK AGYVPDTN +  VE+ V+E LLS+
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLST 740

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLAI+FGLLN++ G+TIH+RKNLRVC DCHNATKYISLVTGREI+VRDM RFH FKN
Sbjct: 741 HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKN 800

Query: 804 GVCSCGDYW 812
           G CSCGDYW
Sbjct: 801 GACSCGDYW 809


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/789 (70%), Positives = 669/789 (84%)

Query: 24  HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
           H+H LSQR YIP+ +Y HP+ALLLE C+SLKELR ILPLI K+GL  +HLFQTKLVSLFC
Sbjct: 21  HRHFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFC 80

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           +Y S+ +AARVFEPI  KL+ LY+TMLKG+AK + LD A+ F +RMR D+V PVVYN+TY
Sbjct: 81  RYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTY 140

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LLKVCGD  E+R GKEIHG L+ +GFSLDLFAMTG+ NMYAKC Q+ EA K+FDRMPERD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 200

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSWNTIVAG++QNG A +AL++V  M EE  +  FITIVS+LPAV+ +  +RIGK +HG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           YAMRAGFDS+VN++TALVDMYAKCG ++TARL+FDGM  RNVVSWNSMI AYV+  NP+E
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           AM IFQKMLD+GV+PT+V++M ALHACADLGDLERG F+HKL  +L+L  +VS+ NSLIS
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLIS 380

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KCK+VD AA +F KLQ +T+VSWNAMILG+AQNGR  EALNYF +M+++ +KPD+FT
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFT 440

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
            VSVI A+AELS+  +AKWIH +V+R+C +KNVFV TAL+DMYAKCGA+  AR +FDMM+
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           ERHVTTWN MIDGYGTHG+GKAA+ELF +M +G  +PN +TFL  ISACSHSGLVE G+ 
Sbjct: 501 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLK 560

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F  +K++Y IEP MDHYGAMVDLLGRAGRLNEAWDFI +MP++P + V+GAMLGAC+IH
Sbjct: 561 CFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           KNV   EK A RLFEL+P++GGYHVLLANIY AASMW+K+ +VR  M ++GL+KTPGCS+
Sbjct: 621 KNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSS 743
           VE+KNEVHSF+SGST HP SK+IY FLE LI +IK AGYVPDTN I  +ED V+E LLSS
Sbjct: 681 VEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLILGLEDDVKEQLLSS 740

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLAI+FGLLN++ G+TIH+RKNLRVC DCHNATKYISLVTGREIIVRDM RFH FKN
Sbjct: 741 HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKN 800

Query: 804 GVCSCGDYW 812
           G CSCGDYW
Sbjct: 801 GACSCGDYW 809


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score = 1174 bits (3036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/704 (78%), Positives = 624/704 (88%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           MLKGYAK +SLD A+SF  RM++D V PVVYN+TYLLK+CGD  +++RGKEIHG +I +G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           FS +LFAMTGVVNMYAKC QI +AY MFDRMPERDLV WNT+++G+AQNGFA++AL LV 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           RM EEG R D ITIVSILPAVA+   LRIG AVHGY +RAGF+S+VNVSTALVDMY+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            V  AR++FDGM  R VVSWNSMI  YV+ G+ E AM IFQKMLD+GV+PTNVT+M ALH
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACADLGDLERG FVHKL+DQLKL +DVS+ NSLISMYSKCK+VD AADIF  L+ KTLVS
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WNAMILGYAQNG VNEALN FC+M+S+NIKPDSFTMVSVIPALAELS+ R AKWIH LVI
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           R   +KNVFVMTAL+DMYAKCGA+ TAR LFDMMN RHV TWN MIDGYGTHGLGK +VE
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF +M +G  KPNDITFLCA+SACSHSGLVEEG+ +F S+KKDYGIEP MDHYGAMVDLL
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLL 480

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAGRLN+AWDFIQKMPI+PGITV+GAMLGACKIHKNV+LGEKAA  +F+L+PD+GGYHV
Sbjct: 481 GRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHV 540

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LLANIYA ASMW K+AKVRTIMEK GLQKTPGCSLVE+ NEVHSFYSG+T HPQSK+IY+
Sbjct: 541 LLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYS 600

Query: 709 FLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           +LETL+DEI+AAGYVPDTNSIHDVED V+  LL++HSEKLAIAFGLLN+S G+ IHIRKN
Sbjct: 601 YLETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKN 660

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVCGDCHNATKYISLVTGREIIVRDMHRFH FK+GVCSCGDYW
Sbjct: 661 LRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 257/494 (52%), Gaps = 9/494 (1%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C    +L+R   I   +I SG        T +V+++ K   ++DA  +F+ +P++ 
Sbjct: 36  LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERD 95

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++TM+ GYA+      A+  ++RM  +   P       +L    D   +R G  +HG
Sbjct: 96  LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++  GF   +   T +V+MY+KCG +  A  +FD M  R +VSWN+++ G+ Q+G AE 
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ +  +M +EG +   +T++  L A A++G L  GK VH    +   DS V+V  +L+ 
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KC RV+ A  +F  ++++ +VSWN+MI  Y + G   EA+  F +M  + ++P + T
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  + A A+L    +  ++H L+ +  L  +V +  +L+ MY+KC  +  A  +F  + 
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN 395

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK- 461
            + +++WNAMI GY  +G    ++  F +M+   IKP+  T +  + A +   ++     
Sbjct: 396 ARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC 455

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH 520
           +  ++      E  +    A++D+  + G +  A      M  +  +T +  M+     H
Sbjct: 456 FFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIH 515

Query: 521 ---GLG-KAAVELF 530
               LG KAA E+F
Sbjct: 516 KNVDLGEKAAFEIF 529


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/785 (68%), Positives = 646/785 (82%), Gaps = 3/785 (0%)

Query: 30  QRAYIPSRIY--RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS 87
           Q   IP+R+Y  RHPS +LLE CTS KEL +ILP IIK+G  ++HLFQTK++SLFCK+ S
Sbjct: 35  QSNSIPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGS 94

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
            S+AARVFE +  KLD LYH MLKGYAK +SL DA+ F +RM  D+V  VV +Y  LL++
Sbjct: 95  NSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQL 154

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           CG+  ++++G+EIHG +I NGF  +LF MT V+++YAKC QI+ AYKMF+RM  +DLVSW
Sbjct: 155 CGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSW 214

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
            T+VAG+AQNG A+ AL LV +M E G++ D +T+VSILPAVA++ +LRIG+++HGYA R
Sbjct: 215 TTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFR 274

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +GF+S+VNV+ AL+DMY KCG    ARLVF GM+S+ VVSWN+MI    + G  EEA   
Sbjct: 275 SGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFAT 334

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F KMLD+G  PT VT+M  L ACA+LGDLERG FVHKLLD+LKL ++VS+ NSLISMYSK
Sbjct: 335 FLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSK 394

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           CK+VD AA IF+ L+ KT V+WNAMILGYAQNG V EALN FC M+S+ IK D FT+V V
Sbjct: 395 CKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGV 453

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           I ALA+ SV R AKWIH L +R+C + NVFV TAL+DMYAKCGA+ TAR LFDMM ERHV
Sbjct: 454 ITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHV 513

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            TWN MIDGYGTHG+GK  ++LFN+M +G  KPNDITFL  ISACSHSG VEEG+  F S
Sbjct: 514 ITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKS 573

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           +++DY +EP MDHY AMVDLLGRAG+L++AW+FIQ+MPI+PGI+V GAMLGACKIHKNVE
Sbjct: 574 MQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVE 633

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LGEKAA +LF+LDPDEGGYHVLLANIYA+ SMWDK+AKVRT ME KGL KTPGCS VEL+
Sbjct: 634 LGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELR 693

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEK 747
           NE+H+FYSGST HP+SK+IY FLETL DEIKAAGYVPD +SIHDVE+ V++ LLSSHSE+
Sbjct: 694 NEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSER 753

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           LAIAFGLLN+SPG+T+HIRKNLRVCGDCH+ TKYISLVTGREIIVRD+ RFH FKNG CS
Sbjct: 754 LAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCS 813

Query: 808 CGDYW 812
           CGDYW
Sbjct: 814 CGDYW 818


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/709 (57%), Positives = 538/709 (75%), Gaps = 2/709 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +H  L+  A  + L  A++    M       PV+  +T LLK+C    ++  G+ +H QL
Sbjct: 192 HHARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQL 251

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
              G S +  A T + NMYAKC +  +A ++FDRMP RD V+WN +VAG+A+NG AE A+
Sbjct: 252 AARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAV 311

Query: 225 DLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
            +V RM EE G R D +T+VS+LPA A+  +L   + VH +A+R GFD  VNVSTA++D+
Sbjct: 312 GMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDV 371

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG V++AR VFDGM+ RN VSWN+MI  Y E G+  EA+ +F++M+ +GV+ T+V++
Sbjct: 372 YCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSV 431

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           + ALHAC +LG L+ G  VH+LL ++ L ++V++ N+LI+MY KCK+ D AA +F +L  
Sbjct: 432 LAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY 491

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           KT VSWNAMILG  QNG   +A+  F +M+ +N+KPDSFT+VS+IPALA++S    A+WI
Sbjct: 492 KTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWI 551

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H   IR   +++V+V+TALIDMYAKCG V  AR+LF+   +RHV TWN MI GYG+HG G
Sbjct: 552 HGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSG 611

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           K AVELF +M      PN+ TFL  +SACSH+GLV+EG  YF+S+K+DYG+EP M+HYG 
Sbjct: 612 KVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGT 671

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           MVDLLGRAG+L+EAW FIQKMP+EPGI+V+GAMLGACK+HKNVEL E++A R+FEL+P+E
Sbjct: 672 MVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEE 731

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
           G YHVLLANIYA AS+W  +A+VRT MEKKGLQKTPG S+V+LKNE+H+FYSGST H Q+
Sbjct: 732 GVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQA 791

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
           K IY  L  LI+EIKA GYVPDT+SIHDVED V+  LL++HSEKLAIA+GL+ ++PG+TI
Sbjct: 792 KDIYARLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTI 851

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I+KNLRVC DCHNATK ISLVTGREII+RD+ RFH FK+G CSCGDYW
Sbjct: 852 QIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 257/496 (51%), Gaps = 6/496 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C +  +L   R +   +   GL  + L  T L +++ K     DA RVF+ +P + 
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARD 290

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ ++ GYA+    + AV  ++RM+ +D   P       +L  C D   +   +E+H
Sbjct: 291 RVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVH 350

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              +  GF   +   T ++++Y KCG ++ A K+FD M +R+ VSWN ++ G+A+NG A 
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L  RM  EG     +++++ L A   +G L  G+ VH   +R G +S VNV  AL+
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALI 470

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY KC R + A  VFD +  +  VSWN+MI    + G+ E+A+R+F +M  + V+P + 
Sbjct: 471 TMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSF 530

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  + A AD+ D  +  ++H    +L L  DV +  +LI MY+KC +V  A  +F+  
Sbjct: 531 TLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSA 590

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +++WNAMI GY  +G    A+  F +M+S    P+  T +SV+ A +   ++   +
Sbjct: 591 RDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQ 650

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            +  ++      E  +     ++D+  + G +  A +    M  E  ++ +  M+     
Sbjct: 651 EYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKL 710

Query: 520 HGLGKAAVELFNKMLE 535
           H   + A E   ++ E
Sbjct: 711 HKNVELAEESAQRIFE 726


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/708 (57%), Positives = 538/708 (75%), Gaps = 1/708 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +H  L+  A  + L  A++  + M      PV+  +T LLK+C   G++  G+ +H QL 
Sbjct: 27  HHARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLA 86

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G   +  A T + NMYAKC +  +A ++FDRMP RD V+WN +VAG+A+NG A +A++
Sbjct: 87  ARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAME 146

Query: 226 LVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +V RM EE G R D IT+VS+LPA AN  +L   +  H +A+R+G + +VNV+TA++D Y
Sbjct: 147 MVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG +  AR+VFD M ++N VSWN+MI  Y + G+  EA+ +F +M+++GV+ T+V+++
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            AL AC +LG L+ G+ VH+LL ++ L ++VS+ N+LI+MYSKCK+VD A+ +F +L  +
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           T VSWNAMILG AQNG   +A+  F +M+ +N+KPDSFT+VSVIPALA++S    A+WIH
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
              IR   +++V+V+TALIDMYAKCG V  AR LF+   ERHV TWN MI GYG+HG GK
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
           AAVELF +M      PN+ TFL  +SACSH+GLV+EG  YFTS+K+DYG+EP M+HYG M
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTM 506

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGRAG+L+EAW FIQKMP++PG++V+GAMLGACK+HKNVEL E++A ++FEL P EG
Sbjct: 507 VDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            YHVLLANIYA ASMW  +A+VRT MEK GLQKTPG S+++LKNE+H+FYSGST H Q+K
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAK 626

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
            IY+ L  LI+EIKA GYVPDT+SIHDVED V+  LL++HSEKLAIAFGL+ ++PG+TI 
Sbjct: 627 EIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQ 686

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I+KNLRVC DCHNATK ISLVTGREII+RD+ RFH FK+G CSCGDYW
Sbjct: 687 IKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 259/501 (51%), Gaps = 7/501 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C +  +L   R +   +   G+  + L  T L +++ K    +DA RVF+ +P + 
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ ++ GYA+      A+  ++RM+ ++   P       +L  C +   +   +E H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              I +G    +   T +++ Y KCG I  A  +FD MP ++ VSWN ++ G+AQNG + 
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L  RM EEG     +++++ L A   +G L  G  VH   +R G DS V+V  AL+
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY+KC RV+ A  VFD +  R  VSWN+MI    + G  E+A+R+F +M  + V+P + 
Sbjct: 305 TMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSF 364

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  + A AD+ D  +  ++H    +L L  DV +  +LI MY+KC +V+ A  +F+  
Sbjct: 365 TLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSA 424

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +++WNAMI GY  +G    A+  F +M+S  I P+  T +SV+ A +   ++   +
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            +  ++      E  +     ++D+  + G +  A A    M  +  ++ +  M+     
Sbjct: 485 EYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544

Query: 520 HGLGKAAVELFNKMLE-GPTK 539
           H   + A E   K+ E GP +
Sbjct: 545 HKNVELAEESAQKIFELGPQE 565


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/708 (57%), Positives = 538/708 (75%), Gaps = 1/708 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +H  L+  A  + L  A++  + M      PV+  +T LLK+C   G++  G+ +H QL 
Sbjct: 27  HHARLRAAAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLA 86

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G   +  A T + NMYAKC +  +A ++FDRMP RD V+WN +VAG+A+NG A +A++
Sbjct: 87  ARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAME 146

Query: 226 LVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +V RM EE G R D IT+VS+LPA AN  +L   +  H +A+R+G + +VNV+TA++D Y
Sbjct: 147 MVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAY 206

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG +  AR+VFD M ++N VSWN+MI  Y + G+  EA+ +F +M+++GV+ T+V+++
Sbjct: 207 CKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVL 266

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            AL AC +LG L+ G+ VH+LL ++ L ++VS+ N+LI+MYSKCK+VD A+ +F +L  +
Sbjct: 267 AALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           T VSWNAMILG AQNG   +A+  F +M+ +N+KPDSFT+VSVIPALA++S    A+WIH
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
              IR   +++V+V+TALIDMYAKCG V  AR LF+   ERHV TWN MI GYG+HG GK
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
           AAVELF +M      PN+ TFL  +SACSH+GLV+EG  YFTS+K+DYG+EP M+HYG M
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTM 506

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGRAG+L+EAW FIQKMP++PG++V+GAMLGACK+HKNVEL E++A ++FEL P EG
Sbjct: 507 VDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            YHVLLANIYA ASMW  +A+VRT MEK GLQKTPG S+++LKNE+H+FYSGST H Q+K
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAK 626

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
            IY+ L  LI+EIKA GYVPDT+SIHDVED V+  LL++HSEKLAIAFGL+ ++PG+TI 
Sbjct: 627 EIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQ 686

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I+KNLRVC DCHNATK ISLVTGREII+RD+ RFH FK+G CSCGDYW
Sbjct: 687 IKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 259/501 (51%), Gaps = 7/501 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C +  +L   R +   +   G+  + L  T L +++ K    +DA RVF+ +P + 
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ ++ GYA+      A+  ++RM+ ++   P       +L  C +   +   +E H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              I +G    +   T +++ Y KCG I  A  +FD MP ++ VSWN ++ G+AQNG + 
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L  RM EEG     +++++ L A   +G L  G  VH   +R G DS V+V  AL+
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY+KC RV+ A  VFD +  R  VSWN+MI    + G  E+A+R+F +M  + V+P + 
Sbjct: 305 TMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSF 364

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  + A AD+ D  +  ++H    +L L  DV +  +LI MY+KC +V+ A  +F+  
Sbjct: 365 TLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSA 424

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +++WNAMI GY  +G    A+  F +M+S  I P+  T +SV+ A +   ++   +
Sbjct: 425 RERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            +  ++      E  +     ++D+  + G +  A A    M  +  ++ +  M+     
Sbjct: 485 EYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544

Query: 520 HGLGKAAVELFNKMLE-GPTK 539
           H   + A E   K+ E GP +
Sbjct: 545 HKNVELAEESAQKIFELGPQE 565


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/680 (57%), Positives = 512/680 (75%), Gaps = 3/680 (0%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           PV+  +T LLK+C    ++  G+ +H QL   G + +  A T + NMY KC +  +A ++
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVG 253
           FDRMP RD V+WN +VAG+A+NG    A++ V RM  E  G R D +T+VS+LPA A+  
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L   + VH +A+RAG D +VNVSTA++D Y KCG VE AR VFD M  RN VSWN+MI 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + GN  EAM +F +M+ +GV+ T+ +++ AL AC +LG L+    VH+LL ++ L +
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +VS+TN+LI+ Y+KCK+ D AA +F++L   KT +SWNAMILG+ QN    +A   F +M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           + +N++PDSFT+VSVIPA+A++S    A+WIH   IR   +++V+V+TALIDMY+KCG V
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             AR LFD   +RHV TWN MI GYG+HG G+AAVELF +M    + PN+ TFL  ++AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GLV+EG  YF S+KKDYG+EP M+HYG MVDLLGRAG+L+EAW FI+ MPIEPGI+V
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GAMLGACK+HKNVEL E++A  +FEL P+EG YHVLLANIYA ASMW  +A+VRT MEK
Sbjct: 494 YGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEK 553

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDV 732
           KGLQKTPG S+++LKNEVH+FYSGST H  +K IY  L  LI+EIK  GYVPDT+SIHDV
Sbjct: 554 KGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIHDV 613

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ED V+  LL++HSEKLAIA+GL+ ++PG+TI I+KNLRVC DCHNATK ISL+TGREII+
Sbjct: 614 EDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIM 673

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD+ RFH FK+G CSCGDYW
Sbjct: 674 RDIQRFHHFKDGKCSCGDYW 693



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 244/483 (50%), Gaps = 8/483 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C +  +L   R +   +   GL  + +  T L +++ K    +DA RVF+ +P + 
Sbjct: 22  LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--PVVYNYTYLLKVCGDVGEIRRGKEI 160
              ++ ++ GYA+      A+  ++RM+ ++    P       +L  C D   +   +E+
Sbjct: 82  RVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREV 141

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G    +   T V++ Y KCG +E A  +FD MP R+ VSWN ++ G+A NG A
Sbjct: 142 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNA 201

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+ L  RM +EG      ++++ L A   +G L   + VH   +R G  S V+V+ AL
Sbjct: 202 TEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNAL 261

Query: 281 VDMYAKCGRVETARLVFDGMKSRNV-VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           +  YAKC R + A  VF+ + ++   +SWN+MI  + +   PE+A R+F +M  + V P 
Sbjct: 262 ITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPD 321

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           + T++  + A AD+ D  +  ++H    + +L  DV +  +LI MYSKC +V  A  +F 
Sbjct: 322 SFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFD 381

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
             + + +++WNAMI GY  +G    A+  F +M+     P+  T +SV+ A +   ++  
Sbjct: 382 SARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 441

Query: 460 A-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGY 517
             K+  ++      E  +     ++D+  + G +  A +   +M  E  ++ +  M+   
Sbjct: 442 GQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGAC 501

Query: 518 GTH 520
             H
Sbjct: 502 KLH 504



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLK 111
           L E+RR+  L+++ GL         L++ + K      AA+VF  + +K   + ++ M+ 
Sbjct: 236 LDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMIL 295

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G+ +    +DA     RM+ ++V P  +    ++    D+ +  + + IHG  I +    
Sbjct: 296 GFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ 355

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D++ +T +++MY+KCG++  A ++FD   +R +++WN ++ G+  +GF + A++L   M 
Sbjct: 356 DVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMK 415

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
             G   +  T +S+L A ++ G +  G+       +  G +  +     +VD+  + G++
Sbjct: 416 GTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKL 475

Query: 291 ETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA-LH 348
           + A      M     +S + +M+ A     N E A    Q + + G E     ++ A ++
Sbjct: 476 DEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIY 535

Query: 349 ACADL-GDLE--RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           A A +  D+   R     K L +    + + + N + + YS       A DI+++L
Sbjct: 536 ANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARL 591


>gi|255569195|ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535145|gb|EEF36825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 563

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/531 (68%), Positives = 449/531 (84%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           +TL +R YIP  IY+HP+A+LLE+CTS+KEL +I+P IIK+G   + LFQTKL+SLFC Y
Sbjct: 30  NTLPRRTYIPGHIYKHPTAVLLELCTSVKELHQIIPSIIKNGFYSEELFQTKLISLFCNY 89

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
            SL++AARVFEPI +KL+ALYHTMLKG+AK +SLD A+ F  RM++D+V PVVYN+TYLL
Sbjct: 90  GSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNVRPVVYNFTYLL 149

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
            +CGD  ++RRGKEIHGQLI +GFS +LFAMT VV++Y KC  I +AYKMFDRM ERDLV
Sbjct: 150 TLCGDNFDLRRGKEIHGQLITSGFSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLV 209

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
            WNTI++G+AQNG  ++AL+LV ++ EEG R D +TIVS+LPAVA++ SLR GKA+H Y 
Sbjct: 210 CWNTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYV 269

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +RAGFD +VN+STALVDMY+KC  + TAR++FDGM SR VV+WNSMIA  VE G+PEEA 
Sbjct: 270 IRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAK 329

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F+KM+D+G++PT+VT+ME LHACAD GDLE+G FVHKL++ LKL ++VS+ NSLISMY
Sbjct: 330 VLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMY 389

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           SKCK+VD AA++F  LQ +TLVSWNAMILGYAQNGR+NEALN+FC+M+S+NIKPDSFTMV
Sbjct: 390 SKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMV 449

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           SVIPALAELS+ R AKWIH LVIR   +  VFVMTAL+DMYAKCGA+ TAR LF+MM+ER
Sbjct: 450 SVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTARKLFNMMSER 509

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
           HV TWN MID YGTHGLGK AV+LF +M +G  KPND+TFLC +SACSHSG
Sbjct: 510 HVITWNSMIDAYGTHGLGKEAVQLFVEMQKGTIKPNDVTFLCVLSACSHSG 560



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 193/377 (51%), Gaps = 35/377 (9%)

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           ++ GF S     T L+ ++   G +  A  VF+ ++++    +++M+  + +  + + A+
Sbjct: 68  IKNGFYSEELFQTKLISLFCNYGSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSAL 127

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
             F +M    V P        L  C D  DL RG  +H  L       ++    +++S+Y
Sbjct: 128 LFFCRMKHDNVRPVVYNFTYLLTLCGDNFDLRRGKEIHGQLITSGFSWNLFAMTAVVSLY 187

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
            KC+ +  A  +F ++  + LV WN +I GYAQNG    AL    K+  +  +PDS T+V
Sbjct: 188 CKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIV 247

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           SV+PA+A++  +R+ K IHA VIR+ F+  V + TAL+DMY+KC ++GTAR +FD M  R
Sbjct: 248 SVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSR 307

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH 563
            V TWN MI G   +G  + A  LF KM++   +P D+T +  + AC+ SG +E+G  +H
Sbjct: 308 TVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVH 367

Query: 564 YFTS-LKKDYGIEPVMD----------------------------HYGAMVDLLGRAGRL 594
                LK D  +  VM+                             + AM+    + GRL
Sbjct: 368 KLVEDLKLDSNVS-VMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRL 426

Query: 595 NEAWDF---IQKMPIEP 608
           NEA +F   +Q   I+P
Sbjct: 427 NEALNFFCEMQSQNIKP 443


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/702 (47%), Positives = 477/702 (67%), Gaps = 1/702 (0%)

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY K    + A+    +M+   + P    +  ++K CG   +++ G+++H  +I  GF  
Sbjct: 94  GYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFES 153

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+   T + +MY KCG +E A ++FDRMP+RD+VSWN I+AG++QNG    AL L + M 
Sbjct: 154 DVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQ 213

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G + +  T+VS++P  A++ +L  GK +H YA+R+G +S V V   LV+MYAKCG V 
Sbjct: 214 VNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVN 273

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
           TA  +F+ M  R+V SWN++I  Y       EA+  F +M  +G++P ++T++  L ACA
Sbjct: 274 TAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACA 333

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            L  LE+G  +H    +    ++  + N+L++MY+KC  V+ A  +F ++  K +V+WNA
Sbjct: 334 HLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNA 393

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           +I GY+Q+G  +EAL  F +M+++ IKPDSF +VSV+PA A    +   K IH   IRS 
Sbjct: 394 IISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG 453

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           FE NV V T L+D+YAKCG V TA+ LF+ M E+ V +W  MI  YG HG G+ A+ LF+
Sbjct: 454 FESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFS 513

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           KM E  TK + I F   ++ACSH+GLV++G+ YF  +K DYG+ P ++HY  +VDLLGRA
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G L+EA   I+ M +EP   V+GA+LGAC+IH N+ELGE+AA  LFELDPD  GY+VLL+
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLS 633

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           NIYA A  W+ +AK+R +M++KG++K PGCS+V +  +V +F  G   HPQS++IY  LE
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693

Query: 712 TLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLR 770
            L ++++ AGYVP+TN ++ DVE+  +EN+LSSHSEKLAI+FG++N+SPG  I I KNLR
Sbjct: 694 ILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLR 753

Query: 771 VCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           VC DCHNATK+IS + GREIIVRD +RFH  KNG CSCGDYW
Sbjct: 754 VCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/427 (37%), Positives = 242/427 (56%), Gaps = 6/427 (1%)

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           + V W   + G+ +NGF   AL L  +M   G   D +  +S++ A  +   L+ G+ VH
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
              +  GF+S V V TAL  MY KCG +E AR VFD M  R+VVSWN++IA Y + G P 
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ +F +M   G++P + T++  +  CA L  LE+G  +H    +  + +DV + N L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           +MY+KC  V+ A  +F ++  + + SWNA+I GY+ N + +EAL +F +M+ + IKP+S 
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           TMVSV+PA A L  +   + IH   IRS FE N  V  AL++MYAKCG V +A  LF+ M
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG- 561
            +++V  WN +I GY  HG    A+ LF +M     KP+    +  + AC+H   +E+G 
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443

Query: 562 -IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            IH +T      G E  +     +VD+  + G +N A    ++MP E  +  +  M+ A 
Sbjct: 444 QIHGYTIRS---GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAY 499

Query: 621 KIHKNVE 627
            IH + E
Sbjct: 500 GIHGHGE 506



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 265/494 (53%), Gaps = 9/494 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++ C S  +L   R++   II  G     +  T L S++ K  SL +A +VF+ +P + 
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRD 185

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ GY++     +A++    M+ + + P       ++ VC  +  + +GK+IH 
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I +G   D+  + G+VNMYAKCG +  A+K+F+RMP RD+ SWN I+ G++ N     
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL    RM   G + + IT+VS+LPA A++ +L  G+ +HGYA+R+GF+S   V  ALV+
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG V +A  +F+ M  +NVV+WN++I+ Y + G+P EA+ +F +M  QG++P +  
Sbjct: 366 MYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFA 425

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           I+  L ACA    LE+G  +H    +    ++V +   L+ +Y+KC  V+ A  +F ++ 
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
            + +VSW  MIL Y  +G   +AL  F KM+    K D     +++ A +   ++    +
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           +   +         +     L+D+  + G +  A  +   M+ E     W  ++     H
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIH 605

Query: 521 ---GLG-KAAVELF 530
               LG +AA  LF
Sbjct: 606 CNIELGEQAAKHLF 619


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/771 (41%), Positives = 487/771 (63%), Gaps = 5/771 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C   + +   R +  LI+K+G        T L+++  K   + DA +VF+ +P + 
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ G A+      A +   RM  + V P    +  LL+ C     + +GK++H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   G+  +++  T +++MY KCG +E+A ++FD +  R++VSW  ++AGFAQ+G  + 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A     +M E G   + +T +SIL A ++  +L+ G+ +  + + AG+ S   V TAL+ 
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG ++ A  VF+ +  +NVV+WN+MI AYV+    + A+  FQ +L +G++P + T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L+ C     LE G +VH L+ +  L +D+ ++N+L+SM+  C  +  A ++F+ + 
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + LVSWN +I G+ Q+G+   A +YF  M+   IKPD  T   ++ A A    +   + 
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR 636

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HAL+  + F+ +V V T LI MY KCG++  A  +F  + +++V +W  MI GY  HG 
Sbjct: 637 LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGR 696

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           GK A+ELF +M +   KP+ ITF+ A+SAC+H+GL+EEG+H+F S+ K++ IEP M+HYG
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYG 755

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL GRAG LNEA +FI KM +EP   V+GA+LGAC++H NVEL EKAA +  ELDP+
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G  V+L+NIYAAA MW ++AK+R +M  +G+ K PG S +E+  +VH+FYS    HPQ
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ I+  LE L  E++  GYVPDT  + HDVED  +E  L  HSE+LAI +GLL + P +
Sbjct: 876 TEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLT 935

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVCGDCH ATK+IS +T R+II RD +RFH FK+GVCSCGD+W
Sbjct: 936 PIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/528 (33%), Positives = 294/528 (55%), Gaps = 3/528 (0%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           +IYR   + LL++C   K L    RI   I KSG+         L++++ K  +   A +
Sbjct: 107 QIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQ 166

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ + +K    ++ +L GY +    ++A     +M  D V P    +  +L  C D   
Sbjct: 167 IFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + +G+E++  ++  G+  DLF  T ++NM+ KCG I +A K+FD +P RDLV+W +++ G
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            A++G  + A +L  RM EEG + D +  VS+L A  +  +L  GK VH      G+D+ 
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V TA++ MY KCG +E A  VFD +K RNVVSW +MIA + + G  +EA   F KM++
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+EP  VT M  L AC+    L+RG  +   + +   G+D  +  +L+SMY+KC  +  
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F K+  + +V+WNAMI  Y Q+ + + AL  F  +  + IKP+S T  S++     
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
              +   KW+H L++++  E ++ V  AL+ M+  CG + +A+ LF+ M +R + +WN +
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           I G+  HG  + A + F  M E   KP+ ITF   ++AC+    + EG
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634



 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 283/514 (55%), Gaps = 7/514 (1%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF  I D   A  + +L   +K    ++A+  L R+    +      Y+ LL++C     
Sbjct: 68  VFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +  G+ I+  +  +G   D+F    ++NMYAKCG    A ++FD M E+D+ SWN ++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           + Q+G  E A  L  +M ++  + D  T VS+L A A+  ++  G+ ++   ++AG+D+ 
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V TAL++M+ KCG +  A  VFD + +R++V+W SMI      G  ++A  +FQ+M +
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +GV+P  V  +  L AC     LE+G  VH  + ++   T++ +  +++SMY+KC  ++ 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F  ++G+ +VSW AMI G+AQ+GR++EA  +F KM    I+P+  T +S++ A + 
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            S ++  + I   +I + +  +  V TAL+ MYAKCG++  A  +F+ +++++V  WN M
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKD 571
           I  Y  H     A+  F  +L+   KPN  TF   ++ C  S  +E G  +H+   L   
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF---LIMK 542

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
            G+E  +    A+V +    G L  A +    MP
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/771 (41%), Positives = 487/771 (63%), Gaps = 5/771 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C   + +   R +  LI+K+G        T L+++  K   + DA +VF+ +P + 
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ G A+      A +   RM  + V P    +  LL+ C     + +GK++H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   G+  +++  T +++MY KCG +E+A ++FD +  R++VSW  ++AGFAQ+G  + 
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A     +M E G   + +T +SIL A ++  +L+ G+ +  + + AG+ S   V TAL+ 
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG ++ A  VF+ +  +NVV+WN+MI AYV+    + A+  FQ +L +G++P + T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L+ C     LE G +VH L+ +  L +D+ ++N+L+SM+  C  +  A ++F+ + 
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + LVSWN +I G+ Q+G+   A +YF  M+   IKPD  T   ++ A A    +   + 
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR 636

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HAL+  + F+ +V V T LI MY KCG++  A  +F  + +++V +W  MI GY  HG 
Sbjct: 637 LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGR 696

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           GK A+ELF +M +   KP+ ITF+ A+SAC+H+GL+EEG+H+F S+ K++ IEP M+HYG
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYG 755

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL GRAG LNEA +FI KM +EP   V+GA+LGAC++H NVEL EKAA +  ELDP+
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G  V+L+NIYAAA MW ++AK+R +M  +G+ K PG S +E+  +VH+FYS    HPQ
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ I+  LE L  E++  GYVPDT  + HDVED  +E  L  HSE+LAI +GLL + P +
Sbjct: 876 TEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLT 935

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVCGDCH ATK+IS +T R+II RD +RFH FK+GVCSCGD+W
Sbjct: 936 PIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 179/528 (33%), Positives = 295/528 (55%), Gaps = 3/528 (0%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           +IYR   + LL++C   K L    RI   I KSG+      +  L++++ K  +   A +
Sbjct: 107 QIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQ 166

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ + +K    ++ +L GY +    ++A     +M  D V P    +  +L  C D   
Sbjct: 167 IFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + +G+E++  ++  G+  DLF  T ++NM+ KCG I +A K+FD +P RDLV+W +++ G
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            A++G  + A +L  RM EEG + D +  VS+L A  +  +L  GK VH      G+D+ 
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V TA++ MY KCG +E A  VFD +K RNVVSW +MIA + + G  +EA   F KM++
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+EP  VT M  L AC+    L+RG  +   + +   G+D  +  +L+SMY+KC  +  
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F K+  + +V+WNAMI  Y Q+ + + AL  F  +  + IKP+S T  S++     
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
              +   KW+H L++++  E ++ V  AL+ M+  CG + +A+ LF+ M +R + +WN +
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           I G+  HG  + A + F  M E   KP+ ITF   ++AC+    + EG
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 283/514 (55%), Gaps = 7/514 (1%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF  I D   A  + +L   +K    ++A+  L R+    +      Y+ LL++C     
Sbjct: 68  VFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +  G+ I+  +  +G   D+F    ++NMYAKCG    A ++FD M E+D+ SWN ++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           + Q+G  E A  L  +M ++  + D  T VS+L A A+  ++  G+ ++   ++AG+D+ 
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V TAL++M+ KCG +  A  VFD + +R++V+W SMI      G  ++A  +FQ+M +
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +GV+P  V  +  L AC     LE+G  VH  + ++   T++ +  +++SMY+KC  ++ 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F  ++G+ +VSW AMI G+AQ+GR++EA  +F KM    I+P+  T +S++ A + 
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            S ++  + I   +I + +  +  V TAL+ MYAKCG++  A  +F+ +++++V  WN M
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKD 571
           I  Y  H     A+  F  +L+   KPN  TF   ++ C  S  +E G  +H+   L   
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF---LIMK 542

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
            G+E  +    A+V +    G L  A +    MP
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 245/515 (47%), Gaps = 80/515 (15%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G+   G+ +V     D      V+N  +K GQ  EA ++ +R                  
Sbjct: 59  GRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLER------------------ 100

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
                     V   H +  R  +  ++ +     N+G    G+ ++ +  ++G    + +
Sbjct: 101 ----------VDSSHIQIYRQTYSALLQLCIKFKNLGD---GERIYNHIKKSGVQPDIFM 147

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
              L++MYAKCG   +A+ +FD M+ ++V SWN ++  YV+ G  EEA ++ ++M+   V
Sbjct: 148 RNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSV 207

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P   T +  L+ACAD  ++++G  ++ L+ +    TD+ +  +LI+M+ KC  +  A  
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  L  + LV+W +MI G A++GR  +A N F +M  + ++PD    VS++ A      
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   K +HA +    ++  ++V TA++ MY KCG++  A  +FD++  R+V +W  MI G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           +  HG    A   FNKM+E   +PN +TF+  + ACS    ++ G        +D+ IE 
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI-----QDHIIEA 442

Query: 577 VMDHYG-------AMVDLLGRAGRLNE--------------AWD-----FIQ-------- 602
               YG       A++ +  + G L +              AW+     ++Q        
Sbjct: 443 ---GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499

Query: 603 -------KMPIEPGITVFGAMLGACKIHKNVELGE 630
                  K  I+P  + F ++L  CK   ++ELG+
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK 534


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 326/772 (42%), Positives = 467/772 (60%), Gaps = 5/772 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLE C    SL E ++I    +K+          KL  L+   N +  A R+F+ IP+  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ +++ YA     D A+     M +  V P  Y Y ++LK C  +  I  G EIH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
              + G   D+F  T +V+ YAKCG + EA ++F  M  RD+V+WN ++AG +  G  + 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L+ +M EEG   +  TIV +LP V    +L  GKA+HGY +R  FD+ V V T L+D
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNV 341
           MYAKC  +  AR +FD M  RN VSW++MI  YV     +EA+ +F +M L   ++PT V
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L ACA L DL RG  +H  + +L    D+ + N+L+SMY+KC  +D A   F ++
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K  VS++A++ G  QNG    AL+ F  M+   I PD  TM+ V+PA + L+ +++  
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             H  +I   F  +  +  ALIDMY+KCG +  AR +F+ M+   + +WN MI GYG HG
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           LG  A+ LF+ +L    KP+DITF+C +S+CSHSGLV EG  +F ++ +D+ I P M+H 
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVD+LGRAG ++EA  FI+ MP EP + ++ A+L AC+IHKN+ELGE+ + ++  L P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  G  VLL+NIY+AA  WD  A +R   +  GL+K PGCS +E+   VH+F  G   H 
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q  +I   LE L+ E+K  GY  + + +  DVE+  +E +L  HSEKLAIAFG+LN   G
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLRVCGDCH A K+++L+T REI VRD +RFH FKNG C+CGD+W
Sbjct: 734 RPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 259/521 (49%), Gaps = 15/521 (2%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY +LL+ C     +   K+IH   + N  + D   +  +  +Y  C Q+  A ++FD +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P   ++ WN I+  +A NG  + A+DL   M   G R +  T   +L A + + ++  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H +A   G +S V V TALVD YAKCG +  A+ +F  M  R+VV+WN+MIA     G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             ++A+++  +M ++G+ P + TI+  L    +   L  G  +H    +      V +  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IK 438
            L+ MY+KC+ +  A  IF  +  +  VSW+AMI GY  +  + EAL  F +M  K+ + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P   T+ SV+ A A+L+ +   + +H  +I+     ++ +   L+ MYAKCG +  A   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD MN +   +++ ++ G   +G    A+ +F  M      P+  T L  + ACSH   +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 559 EEGI--HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           + G   H +  + + +  + ++    A++D+  + G+++ A +   +M     I  + AM
Sbjct: 430 QHGFCSHGYL-IVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAM 485

Query: 617 LGACKIHKNVELGEKAANRLFE-----LDPDEGGYHVLLAN 652
           +    IH    LG +A     +     L PD+  +  LL++
Sbjct: 486 IIGYGIHG---LGMEALGLFHDLLALGLKPDDITFICLLSS 523


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 313/772 (40%), Positives = 479/772 (62%), Gaps = 7/772 (0%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL +C   +   E  R+  L+  S  C        L+S+F ++ +L DA  VF  + ++ 
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ GYAK    D+A++   RM + ++ P VY +  +LK C  V +I RGKEIH 
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  GF  D+     ++ MY KCG I  A  +FD+MP+RD +SWN +++G+ +NG    
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L+L + M E     D IT+ ++  A   + + R+G+ VHGY +++ F   ++++ +L+ 
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+  GR+E A  VF  M+S++VVSW +MIA+ V    P +A+  ++ M  +G+ P  +T
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L ACA +G L+ GI +H++  +  L + V ++NSLI MYSKCK VD A ++F  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           GK +VSW ++ILG   N R  EAL +F +M+ +++KP+S T++SV+ A A +  +   K 
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKE 521

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA  +R+    + F+  A++DMY +CG    A   F+   ++ VT WN+++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQ 580

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K AVELF+KMLE    P++ITF+  + ACS SG+V EG+ YF  +K  Y + P + HY 
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYA 640

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L++A+DFIQ MPI P   ++GA+L AC+IH+NVELGE AA R+FE D  
Sbjct: 641 CVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNK 700

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             GY++LL N+YA    WDK++KVR++M ++GL   PGCS VE+K +VH+F SG   H Q
Sbjct: 701 SVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQ 760

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
           SK I   L+    ++K  G+    +S     +  + ++   HSE+ AIAFGL+N++PG  
Sbjct: 761 SKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMP 820

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD--YW 812
           I + KNL +C  CHN  K+IS +  REI VRD+  +H FK+GVCSCGD  YW
Sbjct: 821 IWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 171/332 (51%), Gaps = 14/332 (4%)

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           GN E+AM+  + ML+  +E      +  L  C      + G  V++L+   K    V + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+L+SM+ +   +  A  +F K+  + + SWN ++ GYA+ G  +EALN + +M    I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ +T  SV+   A +S I   K IHA VIR  FE +V V  ALI MY KCG +  AR L
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--HSG 556
           FD M +R   +WN MI GY  +G G   +ELF+ M E    P+ IT     SAC    + 
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            +  G+H +  +K ++G +  M++  +++ +    GRL EA     +M     +  + AM
Sbjct: 316 RLGRGVHGYV-VKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAM 371

Query: 617 LGACKIHKNVELGEKAAN--RLFELD---PDE 643
           + +   HK   L  KA    ++ EL+   PDE
Sbjct: 372 IASLVSHK---LPFKAVETYKMMELEGILPDE 400


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 313/772 (40%), Positives = 479/772 (62%), Gaps = 7/772 (0%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL +C   +   E  R+  L+  S  C        L+S+F ++ +L DA  VF  + ++ 
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ GYAK    D+A++   RM + ++ P VY +  +LK C  V +I RGKEIH 
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  GF  D+     ++ MY KCG I  A  +FD+MP+RD +SWN +++G+ +NG    
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L+L + M E     D IT+ ++  A   + + R+G+ VHGY +++ F   ++++ +L+ 
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+  GR+E A  VF  M+S++VVSW +MIA+ V    P +A+  ++ M  +G+ P  +T
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L ACA +G L+ GI +H++  +  L + V ++NSLI MYSKCK VD A ++F  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           GK +VSW ++ILG   N R  EAL +F +M+ +++KP+S T++SV+ A A +  +   K 
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKE 521

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA  +R+    + F+  A++DMY +CG    A   F+   ++ VT WN+++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQ 580

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K AVELF+KMLE    P++ITF+  + ACS SG+V EG+ YF  +K  Y + P + HY 
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYA 640

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L++A+DFIQ MPI P   ++GA+L AC+IH+NVELGE AA R+FE D  
Sbjct: 641 CVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNK 700

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             GY++LL N+YA    WDK++KVR++M ++GL   PGCS VE+K +VH+F SG   H Q
Sbjct: 701 SVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQ 760

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
           SK I   L+    ++K  G+    +S     +  + ++   HSE+ AIAFGL+N++PG  
Sbjct: 761 SKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMP 820

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD--YW 812
           I + KNL +C  CHN  K+IS +  REI VRD+  +H FK+GVCSCGD  YW
Sbjct: 821 IWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 171/332 (51%), Gaps = 14/332 (4%)

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           GN E+AM+  + ML+  +E      +  L  C      + G  V++L+   K    V + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+L+SM+ +   +  A  +F K+  + + SWN ++ GYA+ G  +EALN + +M    I+
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ +T  SV+   A +S I   K IHA VIR  FE +V V  ALI MY KCG +  AR L
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--HSG 556
           FD M +R   +WN MI GY  +G G   +ELF+ M E    P+ IT     SAC    + 
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            +  G+H +  +K ++G +  M++  +++ +    GRL EA     +M     +  + AM
Sbjct: 316 RLGRGVHGYV-VKSEFGGDISMNN--SLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAM 371

Query: 617 LGACKIHKNVELGEKAAN--RLFELD---PDE 643
           + +   HK   L  KA    ++ EL+   PDE
Sbjct: 372 IASLVSHK---LPFKAVETYKMMELEGILPDE 400


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 325/772 (42%), Positives = 466/772 (60%), Gaps = 5/772 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLE C    SL E ++I    +K+          KL  L+   N +  A R+F+ IP+  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ +++ YA     D A+     M +  V P  Y Y ++LK C  +  I  G EIH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
              + G   D+F  T +V+ YAKCG + EA ++F  M  RD+V+WN ++AG +  G  + 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L+ +M EEG   +  TIV +LP V    +L  GKA+HGY +R  FD+ V V T L+D
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNV 341
           MYAKC  +  AR +FD M  RN VSW++MI  YV     +EA+ +F +M L   ++PT V
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L ACA L DL RG  +H  + +L    D+ + N+L+SMY+KC  +D A   F  +
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K  VS++A++ G  QNG    AL+ F  M+   I PD  TM+ V+PA + L+ +++  
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             H  +I   F  +  +  ALIDMY+KCG +  AR +F+ M+   + +WN MI GYG HG
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           LG  A+ LF+ +L    KP+DITF+C +S+CSHSGLV EG  +F ++ +D+ I P M+H 
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVD+LGRAG ++EA  FI+ MP EP + ++ A+L AC+IHKN+ELGE+ + ++  L P
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  G  VLL+NIY+AA  WD  A +R   +  GL+K PGCS +E+   VH+F  G   H 
Sbjct: 614 ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHL 673

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q  +I   LE L+ E+K  GY  + + +  DVE+  +E +L  HSEKLAIAFG+LN   G
Sbjct: 674 QLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAG 733

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLRVCGDCH A K+++++T REI VRD +RFH FKNG C+CGD+W
Sbjct: 734 RPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 259/521 (49%), Gaps = 15/521 (2%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY +LL+ C     +   K+IH   + N  + D   +  +  +Y  C Q+  A ++FD +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P   ++ WN I+  +A NG  + A+DL   M   G R +  T   +L A + + ++  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H +A   G +S V V TALVD YAKCG +  A+ +F  M  R+VV+WN+MIA     G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             ++A+++  +M ++G+ P + TI+  L    +   L  G  +H    +      V +  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IK 438
            L+ MY+KC+ +  A  IF  +  +  VSW+AMI GY  +  + EAL  F +M  K+ + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P   T+ SV+ A A+L+ +   + +H  +I+     ++ +   L+ MYAKCG +  A   
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD MN +   +++ ++ G   +G    A+ +F  M      P+  T L  + ACSH   +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 559 EEGI--HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           + G   H +  + + +  + ++    A++D+  + G+++ A +   +M     I  + AM
Sbjct: 430 QHGFCSHGYL-IVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAM 485

Query: 617 LGACKIHKNVELGEKAANRLFE-----LDPDEGGYHVLLAN 652
           +    IH    LG +A     +     L PD+  +  LL++
Sbjct: 486 IIGYGIHG---LGMEALGLFHDLLALGLKPDDITFICLLSS 523


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 309/775 (39%), Positives = 473/775 (61%), Gaps = 12/775 (1%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTK----LVSLFCKYNSLSDAARVFEPI 98
            L  C S   L+  R I    +++GL    LF  K    +++++ K  S+ +A  VF+ +
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGL----LFDVKVANCILNMYAKCGSIEEAREVFDKM 187

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             K    +   + GYA     + A     +M  + V P    Y  +L        ++ GK
Sbjct: 188 EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGK 247

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +H +++  G   D    T +V MYAKCG  ++  ++F+++  RDL++WNT++ G A+ G
Sbjct: 248 AVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG 307

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           + E A ++  +M  EG   + IT V +L A  N  +L  GK +H    +AGF S + V  
Sbjct: 308 YWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQN 367

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+ MY++CG ++ ARLVFD M  ++V+SW +MI    + G   EA+ ++Q+M   GVEP
Sbjct: 368 ALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEP 427

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT    L+AC+    LE G  +H+ + +  L TD  + N+L++MYS C  V  A  +F
Sbjct: 428 NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVF 487

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  + +V++NAMI GYA +    EAL  F +++ + +KPD  T ++++ A A    + 
Sbjct: 488 DRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 547

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +A+ IH LV +  F  +  V  AL+  YAKCG+   A  +F+ M +R+V +WN +I G  
Sbjct: 548 WAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSA 607

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A++LF +M     KP+ +TF+  +SACSH+GL+EEG  YF S+ +D+ I P +
Sbjct: 608 QHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTI 667

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HYG MVDLLGRAG+L+EA   I+ MP +    ++GA+LGAC+IH NV + E+AA    +
Sbjct: 668 EHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLK 727

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LD D    +V L+++YAAA MWD  AK+R +ME++G+ K PG S +++ +++H F +   
Sbjct: 728 LDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDR 787

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQS++IY  L+ L   +K  GYVPDT S+ HDV++  +EN +  HSE+LAIA+GL+++
Sbjct: 788 SHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLIST 847

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            PG+ IHI KNLRVC DCH ATK+IS +  REII RD++RFH FK+GVCSCGDYW
Sbjct: 848 PPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 189/604 (31%), Positives = 332/604 (54%), Gaps = 11/604 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP--D 100
           +L+ C  +K+L   R++   II+            L++++ +  S+ +A +V++ +   +
Sbjct: 29  MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++ M+ GY ++  ++ A+  L +M+   +AP        L  C   G +  G+EI
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H Q +  G   D+     ++NMYAKCG IEEA ++FD+M ++ +VSW   + G+A  G +
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A ++  +M +EG   + IT +S+L A ++  +L+ GKAVH   + AG +S   V TAL
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V MYAKCG  +  R VF+ + +R++++WN+MI    EGG  EEA  ++ +M  +GV P  
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNK 328

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T +  L+AC +   L  G  +H  + +    +D+ + N+LISMYS+C  +  A  +F K
Sbjct: 329 ITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDK 388

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K ++SW AMI G A++G   EAL  + +M+   ++P+  T  S++ A +  + + + 
Sbjct: 389 MVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH  V+ +    +  V   L++MY+ CG+V  AR +FD M +R +  +N MI GY  H
Sbjct: 449 RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH 508

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
            LGK A++LF+++ E   KP+ +T++  ++AC++SG +E      T ++K  G       
Sbjct: 509 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFFSDTSV 567

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
             A+V    + G  ++A    +KM  +  +  + A++G    H     G+ A  +LFE  
Sbjct: 568 GNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGR---GQDAL-QLFERM 622

Query: 641 PDEG 644
             EG
Sbjct: 623 KMEG 626



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/565 (30%), Positives = 296/565 (52%), Gaps = 11/565 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  +LK C +V ++  G+++H  +I +    D + +  ++NMY +CG IEEA +++ ++
Sbjct: 25  DYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKL 84

Query: 200 P--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
              ER + SWN +V G+ Q G+ E AL L+ +M + G   D  TI+S L +  + G+L  
Sbjct: 85  SYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEW 144

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H  AM+AG    V V+  +++MYAKCG +E AR VFD M+ ++VVSW   I  Y +
Sbjct: 145 GREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYAD 204

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E A  IFQKM  +GV P  +T +  L+A +    L+ G  VH  +      +D ++
Sbjct: 205 CGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAV 264

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L+ MY+KC        +F KL  + L++WN MI G A+ G   EA   + +M+ + +
Sbjct: 265 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGV 324

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+  T V ++ A    + + + K IH+ V ++ F  ++ V  ALI MY++CG++  AR 
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD M  + V +W  MI G    G G  A+ ++ +M +   +PN +T+   ++ACS    
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           +E G      +  + G+         +V++    G + +A     +M I+  I  + AM+
Sbjct: 445 LEWGRRIHQQV-VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMI 502

Query: 618 GACKIHKNVELGEKAANRLFE--LDPDEGGYHVLLANIYAAASM-WDKLAKVRTIMEKKG 674
           G    H   +   K  +RL E  L PD+  Y  +L     + S+ W +  ++ T++ K G
Sbjct: 503 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR--EIHTLVRKGG 560

Query: 675 L--QKTPGCSLVELKNEVHSFYSGS 697
                + G +LV    +  SF   S
Sbjct: 561 FFSDTSVGNALVSTYAKCGSFSDAS 585



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 268/512 (52%), Gaps = 2/512 (0%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQ 71
           + +   ++T  E    + Q   +P+RI             +LK  + +   I+ +G    
Sbjct: 202 YADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESD 261

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
               T LV ++ K  S  D  +VFE + ++    ++TM+ G A+    ++A     +M+ 
Sbjct: 262 TAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQR 321

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
           + V P    Y  LL  C +   +  GKEIH ++   GF+ D+     +++MY++CG I++
Sbjct: 322 EGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +FD+M  +D++SW  ++ G A++GF   AL +   M + G   + +T  SIL A ++
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +L  G+ +H   + AG  +  +V   LV+MY+ CG V+ AR VFD M  R++V++N+M
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y      +EA+++F ++ ++G++P  VT +  L+ACA+ G LE    +H L+ +   
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            +D S+ N+L+S Y+KC     A+ +F K+  + ++SWNA+I G AQ+GR  +AL  F +
Sbjct: 562 FSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFER 621

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M+ + +KPD  T VS++ A +   ++    ++  ++         +     ++D+  + G
Sbjct: 622 MKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAG 681

Query: 491 AVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
            +  A AL   M  + +   W  ++     HG
Sbjct: 682 QLDEAEALIKTMPFQANTRIWGALLGACRIHG 713



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 223/451 (49%), Gaps = 35/451 (7%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+D+V  + ++G + +    + +L     V  L  G+ VH + ++           AL++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 283 MYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           MY +CG +E AR V+  +    R V SWN+M+  Y++ G  E+A+++ ++M   G+ P  
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            TIM  L +C   G LE G  +H    Q  L  DV + N +++MY+KC  ++ A ++F K
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K++VSW   I GYA  GR   A   F KM  + + P+  T +SV+ A +  + +++ 
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H+ ++ +  E +  V TAL+ MYAKCG+    R +F+ +  R +  WN MI G    
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK-----DYGIE 575
           G  + A E++N+M      PN IT++  ++AC +S  +  G    + + K     D G++
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 576 P-----------------VMDH--------YGAMVDLLGRAGRLNEAWDFIQKMP---IE 607
                             V D         + AM+  L ++G   EA    Q+M    +E
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           P    + ++L AC     +E G +   ++ E
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVE 457



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 188/383 (49%), Gaps = 16/383 (4%)

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ + Q +  QG +  +   M+ L  C ++ DL  G  VH+ + Q +   D    N+LI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 384 MYSKCKKVDRAADIFSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           MY +C  ++ A  ++ KL    +T+ SWNAM++GY Q G + +AL    +M+   + PD 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T++S + +      + + + IH   +++    +V V   +++MYAKCG++  AR +FD 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M ++ V +W + I GY   G  + A E+F KM +    PN IT++  ++A S    ++ G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
               + +  + G E       A+V +  + G   +     +K+ +   +  +  M+G   
Sbjct: 247 KAVHSRI-LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLA 304

Query: 622 IHKNVELGEKAANRLFE--LDPDEGGYHVLL-ANIYAAASMWDKLAKVRTIMEKKGLQKT 678
                E   +  N++    + P++  Y +LL A + +AA  W K  ++ + + K G    
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGK--EIHSRVAKAGFTSD 362

Query: 679 PGCSLVELKNEVHSFYS--GSTK 699
            G     ++N + S YS  GS K
Sbjct: 363 IG-----VQNALISMYSRCGSIK 380


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/770 (40%), Positives = 463/770 (60%), Gaps = 14/770 (1%)

Query: 47   LEVCTSLKE--LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
            +E+C S+     RR     + +GL D          L+ K   +  A RVF+ + D+ D 
Sbjct: 246  IELCRSIHGYVFRRDFSSAVSNGLID----------LYSKCGDVDVARRVFDQMVDQDDV 295

Query: 105  LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
             + TM+ GYA      + +    +M+  +V     +         +  ++ +GKEIHG  
Sbjct: 296  SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355

Query: 165  IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
            +      D+   T ++ MYAKCG+ E+A ++F  +  RDLV+W+ I+A   Q G+ E AL
Sbjct: 356  LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415

Query: 225  DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
             L   M  +  + + +T++SILPA A++  L++GK++H + ++A  DS ++  TALV MY
Sbjct: 416  SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475

Query: 285  AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            AKCG    A   F+ M SR++V+WNS+I  Y + G+P  A+ +F K+    + P   T++
Sbjct: 476  AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535

Query: 345  EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-G 403
              + ACA L DL++G  +H L+ +L   +D  + N+LI MY+KC  +  A  +F+K    
Sbjct: 536  GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595

Query: 404  KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
            K  V+WN +I  Y QNG   EA++ F +MR +N  P+S T VSV+PA A L+  R     
Sbjct: 596  KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655

Query: 464  HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
            HA +I+  F  N  V  +LIDMYAKCG +  +  LF+ M+ +   +WN M+ GY  HG G
Sbjct: 656  HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715

Query: 524  KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
              A+ LF+ M E   + + ++F+  +SAC H+GLVEEG   F S+   Y I+P ++HY  
Sbjct: 716  DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775

Query: 584  MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
            MVDLLGRAG  +E   FI+ MP+EP   V+GA+LG+C++H NV+LGE A + L +L+P  
Sbjct: 776  MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835

Query: 644  GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              + V+L++IYA +  W    K R+ M   GL+KTPGCS VELKN+VH+F  G   HPQ 
Sbjct: 836  PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895

Query: 704  KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            + ++    TL+++++  GYVPD + +  +VE+  +E  L SHSE+LAI F LLN+ PGST
Sbjct: 896  ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955

Query: 763  IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCH  TK+IS +T R IIVRD  RFH F++G+CSC DYW
Sbjct: 956  IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 175/554 (31%), Positives = 303/554 (54%), Gaps = 8/554 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  C  L  L +I   II SG    H   T L++L+  ++    A  VF+  P+    L
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++M++ Y +    ++A+     M    + P  Y +T++LK C     ++ G   HG++ 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G   D+F   G+V+MY+K G ++ A ++FD+MP+RD+V+WN ++AG +Q+     A+D
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
               M   G     ++++++ P +  + ++ + +++HGY  R  F S   VS  L+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYS 274

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG V+ AR VFD M  ++ VSW +M+A Y   G   E + +F KM    V    V+ + 
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           A  A A+  DLE+G  +H    Q ++ +D+ +   L+ MY+KC + ++A  +F  LQG+ 
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           LV+W+A+I    Q G   EAL+ F +M+++ +KP+  T++S++PA A+LS+++  K IH 
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             +++  + ++   TAL+ MYAKCG    A   F+ M+ R + TWN +I+GY   G    
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA 583
           A+++F K+      P+  T +  + AC+    +++G  IH    L    G E       A
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH---GLIVKLGFESDCHVKNA 571

Query: 584 MVDLLGRAGRLNEA 597
           ++D+  + G L  A
Sbjct: 572 LIDMYAKCGSLPSA 585



 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 317/588 (53%), Gaps = 8/588 (1%)

Query: 40  RHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           ++    +L+ CT    L+  +     I + GL         LV ++ K   L  A  VF+
Sbjct: 129 KYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD 188

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            +P +    ++ M+ G ++     +AV F   M+   V P   +   L      +  I  
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            + IHG +    FS  +    G++++Y+KCG ++ A ++FD+M ++D VSW T++AG+A 
Sbjct: 249 CRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG     L+L  +M     R + ++ VS   A A    L  GK +HG A++   DS + V
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           +T L+ MYAKCG  E A+ +F G++ R++V+W+++IAA V+ G PEEA+ +FQ+M +Q +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P  VT+M  L ACADL  L+ G  +H    +  + +D+S   +L+SMY+KC     A  
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
            F+++  + +V+WN++I GYAQ G    A++ F K+R   I PD+ TMV V+PA A L+ 
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
           +     IH L+++  FE +  V  ALIDMYAKCG++ +A  LF+  +  +   TWNV+I 
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            Y  +G  K A+  F++M      PN +TF+  + A ++     EG+ +   + +  G  
Sbjct: 607 AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ-MGFL 665

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
                  +++D+  + G+L+ +     +M  +  ++ + AML    +H
Sbjct: 666 SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVH 712



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/617 (27%), Positives = 296/617 (47%), Gaps = 32/617 (5%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  LL  C  +  +    +IH Q+IV+GF     ++T ++N+Y+   + + A  +FD  
Sbjct: 34  HYPRLLSSCKHLNPLL---QIHAQIIVSGFK-HHHSITHLINLYSLFHKCDLARSVFDST 89

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P    + WN+++  + ++     AL++   M E+G   D  T   +L A     +L+ G 
Sbjct: 90  PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
             HG   R G +  V +   LVDMY+K G ++ AR VFD M  R+VV+WN+MIA   +  
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +P EA+  F+ M   GVEP++V+++        L ++E    +H  + +    + VS  N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--N 267

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            LI +YSKC  VD A  +F ++  +  VSW  M+ GYA NG   E L  F KM+  N++ 
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  + VS   A AE   +   K IH   ++   + ++ V T L+ MYAKCG    A+ LF
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             +  R +  W+ +I      G  + A+ LF +M     KPN +T +  + AC+   L++
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447

Query: 560 EG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
            G  IH FT +K D  ++  +    A+V +  + G    A     +M     +T    + 
Sbjct: 448 LGKSIHCFT-VKAD--MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504

Query: 618 GACKI---HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK---VRTIME 671
           G  +I   +  +++  K   RL  ++PD G     +  +  A ++ + L +   +  ++ 
Sbjct: 505 GYAQIGDPYNAIDMFYKL--RLSAINPDAG----TMVGVVPACALLNDLDQGTCIHGLIV 558

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK----AAGYVPDTN 727
           K G +     S   +KN +   Y+     P ++ ++   +   DE+      A Y+ + +
Sbjct: 559 KLGFE-----SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613

Query: 728 SIHDVEDYVQENLLSSH 744
           +   +  + Q  L + H
Sbjct: 614 AKEAISSFHQMRLENFH 630


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 306/659 (46%), Positives = 435/659 (66%), Gaps = 2/659 (0%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R   +IH QL+V+G     F +T  VN     G+I  A K+FD  PE  +  WN I+ G+
Sbjct: 85  RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           + + F   A+++ +RM   G   D  T+  +L A + V  L +GK VHG   R GF+S V
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V   LV +YAKCGRVE AR+VF+G+  RN+VSW SMI+ Y + G P EA+RIF +M  +
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            V+P  + ++  L A  D+ DLE+G  +H  + ++ L  +  +  SL +MY+KC +V  A
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVA 324

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
              F +++   ++ WNAMI GYA+NG  NEA+  F +M SKNI+ DS T+ S I A A++
Sbjct: 325 RSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQV 384

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +  AKW+   + ++ +  +VFV TALIDM+AKCG+V  AR +FD   ++ V  W+ MI
Sbjct: 385 GSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMI 444

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            GYG HG G+ A++LF  M +    PND+TF+  ++AC+HSGLVEEG   F S+K  YGI
Sbjct: 445 VGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGI 503

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
           E    HY  +VDLLGR+G LNEA+DFI  MPIEPG++V+GA+LGACKI+++V LGE AA 
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAE 563

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           +LF LDP   G++V L+N+YA++ +WD +AKVR +M +KGL K  G SL+E+  ++ +F 
Sbjct: 564 QLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFR 623

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
            G   HP+ K I+  LE+L   +K AG++P   S+ HD+    +E  L +HSE+LAIA+G
Sbjct: 624 VGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYG 683

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L++++PG+T+ I KNLR C +CH+ATK IS +  REI+VRD +RFH FKNGVCSC DYW
Sbjct: 684 LISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 237/425 (55%), Gaps = 2/425 (0%)

Query: 28  LSQRAYIPSRIYRHPSAL--LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           L    YIP   +   S    LL+     + L +I   ++ SGL +     TK V+     
Sbjct: 57  LDHSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNI 116

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
             +  A +VF+  P+    L++ +++GY+      DA+    RM+   V P  +    +L
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           K C  V  +  GK +HGQ+   GF  D+F   G+V +YAKCG++E+A  +F+ + +R++V
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW ++++G+ QNG    AL +  +M +   + D+I +VS+L A  +V  L  GK++HG  
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCV 296

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           ++ G +   ++  +L  MYAKCG+V  AR  FD M+  NV+ WN+MI+ Y + G   EA+
Sbjct: 297 VKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAV 356

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +FQ+M+ + +   ++T+  A+ ACA +G L+   ++   +++ +   DV +  +LI M+
Sbjct: 357 GLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMF 416

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           +KC  VD A ++F +   K +V W+AMI+GY  +GR  +A++ F  M+   + P+  T V
Sbjct: 417 AKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476

Query: 446 SVIPA 450
            ++ A
Sbjct: 477 GLLTA 481



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 169/317 (53%), Gaps = 3/317 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C+ +  L   +R+   I + G       Q  LV+L+ K   +  A  VFE + D+ 
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ GY +     +A+    +MR  +V P       +L+   DV ++ +GK IHG
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++  G   +   +  +  MYAKCGQ+  A   FD+M   +++ WN +++G+A+NG+   
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L   M  +  R D IT+ S + A A VGSL + K +  Y  +  + + V V+TAL+D
Sbjct: 355 AVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALID 414

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+AKCG V+ AR VFD    ++VV W++MI  Y   G  ++A+ +F  M   GV P +VT
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVT 474

Query: 343 IMEALHACADLGDLERG 359
            +  L AC   G +E G
Sbjct: 475 FVGLLTACNHSGLVEEG 491



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 1/140 (0%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
            T L+ +F K  S+  A  VF+   DK   ++  M+ GY       DA+     M+   V
Sbjct: 409 NTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGV 468

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P    +  LL  C   G +  G E+   +   G          VV++  + G + EAY 
Sbjct: 469 CPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYD 528

Query: 195 MFDRMPERDLVS-WNTIVAG 213
               MP    VS W  ++  
Sbjct: 529 FITTMPIEPGVSVWGALLGA 548


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 312/770 (40%), Positives = 462/770 (60%), Gaps = 14/770 (1%)

Query: 47   LEVCTSLKE--LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
            +E+C S+     RR     + +GL D          L+ K   +  A RVF+ + D+ D 
Sbjct: 246  IELCRSIHGYVFRRDFSSAVSNGLID----------LYSKCGDVDVARRVFDQMVDQDDV 295

Query: 105  LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
             + TM+ GYA      + +    +M+  +V     +         +  ++ +GKEIHG  
Sbjct: 296  SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355

Query: 165  IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
            +      D+   T ++ MYAKCG+ E+A ++F  +  RDLV+W+ I+A   Q G+ E AL
Sbjct: 356  LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415

Query: 225  DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
             L   M  +  + + +T++SILPA A++  L++GK++H + ++A  DS ++  TALV MY
Sbjct: 416  SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475

Query: 285  AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            AKCG    A   F+ M SR++V+WNS+I  Y + G+P  A+ +F K+    + P   T++
Sbjct: 476  AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535

Query: 345  EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-G 403
              + ACA L DL++G  +H L+ +L   +D  + N+LI MY+KC  +  A  +F+K    
Sbjct: 536  GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595

Query: 404  KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
            K  V+WN +I  Y QNG   EA++ F +MR +N  P+S T VSV+PA A L+  R     
Sbjct: 596  KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655

Query: 464  HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
            HA +I+  F  N  V  +LIDMYAKCG +  +  LF+ M+ +   +WN M+ GY  HG G
Sbjct: 656  HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715

Query: 524  KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
              A+ LF+ M E   + + ++F+  +SAC H GLVEEG   F S+   Y I+P ++HY  
Sbjct: 716  DRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775

Query: 584  MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
            MVDLLGRAG  +E   FI+ MP+EP   V+GA+LG+C++H NV+LGE A + L +L+P  
Sbjct: 776  MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835

Query: 644  GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              + V+L++IYA +  W    K R+ M   GL+KTPGCS VELKN+VH+F  G   HPQ 
Sbjct: 836  PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895

Query: 704  KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            + ++    TL+++++  GYVPD + +  +VE+  +E  L SHSE+LAI F LLN+ PGST
Sbjct: 896  ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955

Query: 763  IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCH  TK+IS +T R IIVRD  RFH F++G+CSC DYW
Sbjct: 956  IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 175/554 (31%), Positives = 303/554 (54%), Gaps = 8/554 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  C  L  L +I   II SG    H   T L++L+  ++    A  VF+  P+    L
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++M++ Y +    ++A+     M    + P  Y +T++LK C     ++ G   HG++ 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G   D+F   G+V+MY+K G ++ A ++FD+MP+RD+V+WN ++AG +Q+     A+D
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
               M   G     ++++++ P +  + ++ + +++HGY  R  F S   VS  L+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYS 274

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG V+ AR VFD M  ++ VSW +M+A Y   G   E + +F KM    V    V+ + 
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           A  A A+  DLE+G  +H    Q ++ +D+ +   L+ MY+KC + ++A  +F  LQG+ 
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRD 394

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           LV+W+A+I    Q G   EAL+ F +M+++ +KP+  T++S++PA A+LS+++  K IH 
Sbjct: 395 LVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             +++  + ++   TAL+ MYAKCG    A   F+ M+ R + TWN +I+GY   G    
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN 514

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA 583
           A+++F K+      P+  T +  + AC+    +++G  IH    L    G E       A
Sbjct: 515 AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH---GLIVKLGFESDCHVKNA 571

Query: 584 MVDLLGRAGRLNEA 597
           ++D+  + G L  A
Sbjct: 572 LIDMYAKCGSLPSA 585



 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 316/588 (53%), Gaps = 8/588 (1%)

Query: 40  RHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           ++    +L+ CT    L+  +     I + GL         LV ++ K   L  A  VF+
Sbjct: 129 KYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD 188

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            +P +    ++ M+ G ++     +AV F   M+   V P   +   L      +  I  
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            + IHG +    FS  +    G++++Y+KCG ++ A ++FD+M ++D VSW T++AG+A 
Sbjct: 249 CRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG     L+L  +M     R + ++ VS   A A    L  GK +HG A++   DS + V
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           +T L+ MYAKCG  E A+ +F G++ R++V+W+++IAA V+ G PEEA+ +FQ+M +Q +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P  VT+M  L ACADL  L+ G  +H    +  + +D+S   +L+SMY+KC     A  
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
            F+++  + +V+WN++I GYAQ G    A++ F K+R   I PD+ TMV V+PA A L+ 
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
           +     IH L+++  FE +  V  ALIDMYAKCG++ +A  LF+  +  +   TWNV+I 
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            Y  +G  K A+  F++M      PN +TF+  + A ++     EG+ +   + +  G  
Sbjct: 607 AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ-MGFL 665

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
                  +++D+  + G+L  +     +M  +  ++ + AML    +H
Sbjct: 666 SNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVH 712



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/617 (27%), Positives = 296/617 (47%), Gaps = 32/617 (5%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  LL  C  +  +    +IH Q+IV+GF     ++T ++N+Y+   + + A  +FD  
Sbjct: 34  HYPRLLSSCKHLNPLL---QIHAQIIVSGFK-HHHSITHLINLYSLFHKCDLARSVFDST 89

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P    + WN+++  + ++     AL++   M E+G   D  T   +L A     +L+ G 
Sbjct: 90  PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
             HG   R G +  V +   LVDMY+K G ++ AR VFD M  R+VV+WN+MIA   +  
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +P EA+  F+ M   GVEP++V+++        L ++E    +H  + +    + VS  N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--N 267

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            LI +YSKC  VD A  +F ++  +  VSW  M+ GYA NG   E L  F KM+  N++ 
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  + VS   A AE   +   K IH   ++   + ++ V T L+ MYAKCG    A+ LF
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             +  R +  W+ +I      G  + A+ LF +M     KPN +T +  + AC+   L++
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447

Query: 560 EG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
            G  IH FT +K D  ++  +    A+V +  + G    A     +M     +T    + 
Sbjct: 448 LGKSIHCFT-VKAD--MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504

Query: 618 GACKI---HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK---VRTIME 671
           G  +I   +  +++  K   RL  ++PD G     +  +  A ++ + L +   +  ++ 
Sbjct: 505 GYAQIGDPYNAIDMFYKL--RLSAINPDAG----TMVGVVPACALLNDLDQGTCIHGLIV 558

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK----AAGYVPDTN 727
           K G +     S   +KN +   Y+     P ++ ++   +   DE+      A Y+ + +
Sbjct: 559 KLGFE-----SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613

Query: 728 SIHDVEDYVQENLLSSH 744
           +   +  + Q  L + H
Sbjct: 614 AKEAISSFHQMRLENFH 630


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 316/769 (41%), Positives = 473/769 (61%), Gaps = 5/769 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L+   ++L +L +    II +GL +  +  TKL        ++  A+ +F  IP+    L
Sbjct: 16  LINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFL 75

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           Y+ +++ ++   S   AVS    +R    + P  + Y +++     +G            
Sbjct: 76  YNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS--- 132

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           IV GF  DLF  + +V  Y K  ++  A K+FD M ERD V WNT+V+G  +N   + A+
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +   M + G   D  T+ ++LP VA +  L +G  +   AM+ GF S   V T L  +Y
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KCG +ETARL+F  +   ++VS+N+MI+ Y      E ++R+F+++L  G +  + +I+
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             +      G L     +H    +  + ++ S++ +L ++YS+  +++ A  +F +   K
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           +L SWNAMI GYAQNG   +A++ F +M+   ++P+  T+ S++ A A+L  +   KW+H
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L+ R  FE N+FV TALIDMYAKCG++  A+ LF MM E++  TWN MI GYG HG G 
Sbjct: 433 DLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGH 492

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+ LFN+ML     P  +TFL  + ACSH+GLV EG   F S+  D+G EP+ +HY  M
Sbjct: 493 EALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACM 552

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGRAG L++A DFI+KMP+EPG  V+GA+LGAC IHK+  L   A+++LFELDP   
Sbjct: 553 VDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNV 612

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           GY+VLL+NIY+A   + + A VR +++++ L KTPGC+L+E+ N +H F SG   HPQ+ 
Sbjct: 613 GYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQAT 672

Query: 705 RIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            IY  LE L  +++ AG+  +T + +HDVE+  +E ++  HSEKLAIAFGL+ S PG+ I
Sbjct: 673 AIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEI 732

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLRVC DCHNATK+IS +T R I+VRD +RFH FK+G+CSCGDYW
Sbjct: 733 RIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 243/497 (48%), Gaps = 9/497 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
            L +   V  + +  + H Q+I+NG   DL  +T + +  +    I++A  +F  +P  D
Sbjct: 13  FLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVH 262
           L  +N ++  F+ N     A+ L T + +      D  T   +   ++   SL +G  +H
Sbjct: 73  LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFV---ISGASSLGLGLLLH 129

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            +++ AGF S + V +A+V  Y K  RV  AR VFDGM  R+ V WN+M++  V+    +
Sbjct: 130 AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ IF  M+  G+   + T+   L   A+L DL  G+ +  L  ++   +   +   L 
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            +YSKC +++ A  +F ++    LVS+NAMI GY  N     ++  F ++     K +S 
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++V +IP       +   + IH    +S    N  V TAL  +Y++   + +AR LFD  
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           +E+ + +WN MI GY  +GL + A+ LF +M +   +PN +T    +SAC+  G +  G 
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG- 428

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
            +   L      E  +    A++D+  + G + EA      MP +  +T + AM+    +
Sbjct: 429 KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT-WNAMISGYGL 487

Query: 623 HKNVELGEKAANRLFEL 639
           H     G +A N   E+
Sbjct: 488 HG---YGHEALNLFNEM 501


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 472/771 (61%), Gaps = 5/771 (0%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C   K + +   +  LI+ +G        T L+++  K   + DA +VF  +P + 
Sbjct: 211 MLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ G A+      A +    M  + V P    +  LLK C     + +GK +H 
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   G   +++  T +++MY KCG +E+A ++F+ +  R++VSW  ++AGFAQ+G  E 
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEE 390

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A     +M E G   + +T +SIL A +   +L+ G+ +H   ++AG+ +   V TAL+ 
Sbjct: 391 AFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLS 450

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG +  AR VF+ +  +NVV+WN+MI AYV+    + A+  FQ +L +G++P + T
Sbjct: 451 MYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSST 510

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L+ C     LE G +V  L+ +    +D+ + N+L+SM+  C  +  A ++F+ + 
Sbjct: 511 FTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + LVSWN +I G+ Q+G    A +YF  M+   +KPD  T   ++ A A    +   + 
Sbjct: 571 ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRR 630

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HAL+  +  + +V V T LI MY KCG++  A  +F  + +++V +W  MI GY  HG 
Sbjct: 631 LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGR 690

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           GK A+ELF +M +   KP+ ITF+ A+SAC+H+GL++EG+H+F S+ KD+ IEP M+HYG
Sbjct: 691 GKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYG 749

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL GRAG L+EA +FI KM ++P   ++GA+LGAC++H +VEL EK A +  ELDP+
Sbjct: 750 CMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPN 809

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G +V+L+NIYAAA MW ++ K+R +M  +G+ K PG S +E+   VH F S    HPQ
Sbjct: 810 DDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQ 869

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            + I+  L  L  E+K  GYVPDT  + HDVED  +E+ L  HSE+LAIA+GLL + P +
Sbjct: 870 IEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLT 929

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVCGDCH ATK IS +T R+II RD +RFH FK+GVCSCGD+W
Sbjct: 930 PIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 293/528 (55%), Gaps = 3/528 (0%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           +I+R   + LL++C   K L    RI   I  S +         L+S++ K  + + A +
Sbjct: 101 QIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQ 160

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ +PDK    ++ +L GY +    ++A     +M  D V P  Y + Y+L  C D   
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + +G E+   ++  G+  DLF  T ++NM+ KCG +++A K+F+ +P RDL++W +++ G
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            A++   + A +L   M EEG + D +  VS+L A  +  +L  GK VH      G D+ 
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V TAL+ MY KCG +E A  VF+ +K RNVVSW +MIA + + G  EEA   F KM++
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+EP  VT M  L AC+    L++G  +H  + +    TD  +  +L+SMY+KC  +  
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F ++  + +V+WNAMI  Y Q+ + + A+  F  +  + IKPDS T  S++     
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
              +   KW+ +L+IR+ FE ++ +  AL+ M+  CG + +A  LF+ M ER + +WN +
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           I G+  HG  + A + F  M E   KP+ ITF   ++AC+    + EG
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628



 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 272/499 (54%), Gaps = 1/499 (0%)

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           +  L   +K   L +A+  L+ +    +      Y+ LL++C     +  G+ IH  +  
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +    D+F    +++MYAKCG    A ++FD MP++D+ SWN ++ G+ Q+   E A  L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             +M ++G + D  T V +L A A+  ++  G  +    + AG+D+ + V TAL++M+ K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG V+ A  VF+ +  R++++W SMI         ++A  +FQ M ++GV+P  V  +  
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L AC     LE+G  VH  + ++ L T++ +  +L+SMY+KC  ++ A ++F+ ++G+ +
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSW AMI G+AQ+GR+ EA  +F KM    I+P+  T +S++ A +  S ++  + IH  
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +I++ +  +  V TAL+ MYAKCG++  AR +F+ +++++V  WN MI  Y  H     A
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           V  F  +L+   KP+  TF   ++ C     +E G  +  SL    G E  +    A+V 
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVS 551

Query: 587 LLGRAGRLNEAWDFIQKMP 605
           +    G L  A +    MP
Sbjct: 552 MFVNCGDLMSAMNLFNDMP 570



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 234/532 (43%), Gaps = 66/532 (12%)

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC---ADLGDLERG 359
           +N    N+ +    + G   EAM +   +    ++    T    L  C    +LGD ER 
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER- 125

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  +   K+  D+ M N LISMY+KC   + A  IF ++  K + SWN ++ GY Q+
Sbjct: 126 --IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQH 183

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R  EA     +M    +KPD +T V ++ A A+   +     + +L++ + ++ ++FV 
Sbjct: 184 RRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVG 243

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TALI+M+ KCG V  A  +F+ +  R + TW  MI G   H   K A  LF  M E   +
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303

Query: 540 PNDITFLCAISACSHSGLVEEG---------------IHYFTSLKKDY----GIEPVMD- 579
           P+ + F+  + AC+H   +E+G               I+  T+L   Y     +E  ++ 
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363

Query: 580 ----------HYGAMVDLLGRAGRLNEAWDFIQKM---PIEPGITVFGAMLGACKIHKNV 626
                      + AM+    + GR+ EA+ F  KM    IEP    F ++LGAC     +
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           + G +  +R+      + GY   + +     ++    AK  ++M+ + + +      V  
Sbjct: 424 KQGRQIHDRII-----KAGY---ITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVA 475

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQEN---LLSS 743
            N + + Y    K+  +  + TF   L + IK     PD+++   + +  +      L  
Sbjct: 476 WNAMITAYVQHEKYDNA--VATFQALLKEGIK-----PDSSTFTSILNVCKSPDALELGK 528

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRV----CGDCHNATKYISLVTGREII 791
             + L I  G       S +HIR  L      CGD  +A    + +  R+++
Sbjct: 529 WVQSLIIRAGF-----ESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLV 575


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/705 (42%), Positives = 449/705 (63%), Gaps = 1/705 (0%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ G+AK     +       +      P  Y   ++++ C D+  ++ G+ IH  +   G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
             LD F    +V+MY KC +IE+A  +FD+M ERDLV+W  ++ G+A+ G A  +L L  
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           +M EEG   D + +V+++ A A +G++   + +  Y  R  F   V + TA++DMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            VE+AR +FD M+ +NV+SW++MIAAY   G   +A+ +F+ ML  G+ P  +T+   L+
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           AC+DL +L+ G  +H ++ +  L  D  +  +L+ MY KC++++ A  +F K+  + LV+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W  MI GYA+ G  NE+L  F KMR + + PD   MV+V+ A A+L  +  A+ I   + 
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           R  F+ +V + TA+IDM+AKCG V +AR +FD M E++V +W+ MI  YG HG G+ A++
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF  ML     PN IT +  + ACSH+GLVEEG+ +F+ + +DY +   + HY  +VDLL
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLL 480

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAGRL+EA   I+ M +E    ++GA LGAC+ HK+V L EKAA  L EL P   G+++
Sbjct: 481 GRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYI 540

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+NIYA A  W+ +AK R +M ++ L+K PG + +E+ N+ H F  G T HP+SK IY 
Sbjct: 541 LLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYE 600

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            L++L ++++  GYVPDTN + HDV++ ++  +L SHSEKLAIAFGL+ +   + I I K
Sbjct: 601 MLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIK 660

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVCGDCH   K +S +TGR IIVRD +RFH FK G CSCGDYW
Sbjct: 661 NLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 261/513 (50%), Gaps = 6/513 (1%)

Query: 45  LLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
            ++  C  LK L   R I  ++ K GL   H     LV ++ K   + DA  +F+ + ++
Sbjct: 35  FVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 94

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  M+ GYA+    ++++    +MR + V P       ++  C  +G + + + I 
Sbjct: 95  DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 154

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +    F LD+   T +++MYAKCG +E A ++FDRM E++++SW+ ++A +  +G   
Sbjct: 155 DYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 214

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            ALDL   M   G   D IT+ S+L A +++ +L++G+ +H    + G D    V  ALV
Sbjct: 215 KALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 274

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KC  +E AR +FD M  R++V+W  MI  Y E GN  E++ +F KM ++GV P  V
Sbjct: 275 DMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 334

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            ++  + ACA LG + +   +   + + K   DV +  ++I M++KC  V+ A +IF ++
Sbjct: 335 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 394

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + K ++SW+AMI  Y  +G+  +AL+ F  M    I P+  T+VS++ A +   ++    
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454

Query: 462 WIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
              +L+        +V   T ++D+  + G +  A  L + M  E+    W   +    T
Sbjct: 455 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 514

Query: 520 HGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
           H     A +    +LE  P  P     L  I A
Sbjct: 515 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYA 547


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 327/814 (40%), Positives = 474/814 (58%), Gaps = 61/814 (7%)

Query: 60  LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
           LP +            T +V+ +    +   A  V E +       ++ +++ + K   L
Sbjct: 84  LPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRL 143

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           D A++   RM      P  +   ++LK CG++   R G   HG +  NGF  ++F    +
Sbjct: 144 DSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNAL 203

Query: 180 VNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQNGFAELALDLVTRM----HE 232
           V MY++CG +EEA  +FD + +R   D++SWN+IV+   ++  A  ALDL ++M    HE
Sbjct: 204 VAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE 263

Query: 233 E--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           +    R D I+IV+ILPA  ++ ++   K VHG A+R G    V V  AL+D YAKCG +
Sbjct: 264 KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLM 323

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE---------------------------- 322
           E A  VF+ M+ ++VVSWN+M+A Y + GN E                            
Sbjct: 324 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 383

Query: 323 -------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL--------LD 367
                  EA+ +F++M+  G  P  VTI+  L ACA LG   +G  +H          LD
Sbjct: 384 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 443

Query: 368 QLKLGTDVSMT--NSLISMYSKCKKVDRAADIFS--KLQGKTLVSWNAMILGYAQNGRVN 423
               G D  +   N+LI MYSKC+    A  IF    L+ + +V+W  MI G+AQ G  N
Sbjct: 444 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 503

Query: 424 EALNYFCKMRSK--NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNV-FVM 479
           +AL  F +M S+   + P+++T+  ++ A A L+ IR  K IHA V+R   +E +  FV 
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 563

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             LIDMY+KCG V TAR +FD M+++   +W  M+ GYG HG G  A+++F+KM +    
Sbjct: 564 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 623

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+DITFL  + ACSH G+V++G+ YF S+  DYG+ P  +HY   +DLL R+GRL++AW 
Sbjct: 624 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWR 683

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            ++ MP+EP   V+ A+L AC++H NVEL E A N+L E++ +  G + L++NIYA A  
Sbjct: 684 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 743

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  +A++R +M+K G++K PGCS V+ +    SF+ G   HP S +IY  LE+LID IKA
Sbjct: 744 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 803

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYVP+TN ++HDV++  + NLL  HSEKLA+A+GLL +SPG  I I KNLRVCGDCH+A
Sbjct: 804 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSA 863

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             YIS +   EI+VRD  RFH FKNG CSCG YW
Sbjct: 864 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/568 (29%), Positives = 264/568 (46%), Gaps = 90/568 (15%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS--------LDLFAM-------- 176
           DV P   ++  LLK C     +    +IH Q+I +G          + L A+        
Sbjct: 41  DVYPS--HFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 95

Query: 177 ----TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
               TGVV  Y  CG  + A  + +R+     V WN ++    + G  + A+++  RM  
Sbjct: 96  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            G R D  T+  +L A   + S R G A HG     GF+S V +  ALV MY++CG +E 
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215

Query: 293 ARLVFDGMKSR---NVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTN-----VTI 343
           A ++FD +  R   +V+SWNS+++A+V+  N   A+ +F KM L    +PTN     ++I
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +  L AC  L  + +   VH   + ++ GT  DV + N+LI  Y+KC  ++ A  +F+ +
Sbjct: 276 VNILPACGSLKAVPQTKEVHG--NAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 333

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK----------------------- 438
           + K +VSWNAM+ GY+Q+G    A   F  MR +NI                        
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393

Query: 439 ------------PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF----------EKNV 476
                       P+  T++SV+ A A L        IHA  +++C           ++++
Sbjct: 394 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 453

Query: 477 FVMTALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
            V  ALIDMY+KC +   AR++FD   + ER+V TW VMI G+  +G    A++LF +M+
Sbjct: 454 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 513

Query: 535 EGP--TKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
             P    PN  T  C + AC+H   +  G  IH +      Y           ++D+  +
Sbjct: 514 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV-ANCLIDMYSK 572

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            G ++ A      M  +  I+    M G
Sbjct: 573 CGDVDTARHVFDSMSQKSAISWTSMMTG 600


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/737 (40%), Positives = 464/737 (62%), Gaps = 4/737 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S+F ++  L +A  VF  + ++    ++ ++ GYAK    D+A++   RM +  + P 
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG + ++ RG+E+H  +I  GF  D+  +  ++ MY KCG I  A  +FD
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RMP RD +SWN +++G+ +N      L L   M E     D +T+ S++ A   +G  R+
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VHGY ++ GF + V+V+ +L+ M++  G  + A +VF  M+ +++VSW +MI+ Y +
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G PE+A+  +  M  +GV P  +TI   L ACA LG L++GI +H+  D+  L + V +
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NSLI MYSKC+ +D+A ++F ++  K ++SW ++ILG   N R  EAL +F +M   ++
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSL 493

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T+VSV+ A A +  +   K IHA  +R+    + F+  AL+DMY +CG +  A  
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F+   E+ V +WN+++ GY   G G  AVELF+KM+E    P++ITF   + ACS SG+
Sbjct: 554 QFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G+ YF S++  + I P + HY ++VDLLGRAGRL +A++FI+KMPI+P   ++GA+L
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC+I++NVELGE AA  +FE+D    GY++LL N+YA +  WD++A+VR IM +  L  
Sbjct: 673 NACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTV 732

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ 737
            PGCS VE+  +VH+F +G   HPQ K I   LE   ++++A G     +S  D  D  +
Sbjct: 733 DPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASK 792

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +   HSE+LAIAFGL+N+ PG+ I + KNL +C +CHN  K+IS V  R I VRD  +
Sbjct: 793 AEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQ 852

Query: 798 FHCFKNGVCSCGD--YW 812
           FH FK+GVCSCGD  YW
Sbjct: 853 FHHFKDGVCSCGDEGYW 869



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 175/560 (31%), Positives = 280/560 (50%), Gaps = 10/560 (1%)

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
             L+ A+  L  M+   V+     Y  LL++C        G  +H  +      L +   
Sbjct: 73  GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++M+ + G + EA+ +F +M ERDL SWN +V G+A+ G+ + AL+L  RM   G R
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D  T   +L     +  L  G+ VH + +R GF+S V+V  AL+ MY KCG + +ARLV
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD M  R+ +SWN+MI+ Y E     E +R+F  M +  V+P  +T+   + AC  LGD 
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  VH  + +     +VS+ NSLI M+S     D A  +FSK++ K LVSW AMI GY
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            +NG   +A+  +  M  + + PD  T+ SV+ A A L ++     +H    R+     V
Sbjct: 373 EKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV 432

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V  +LIDMY+KC  +  A  +F  +  ++V +W  +I G   +     A+  F +M+  
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492

Query: 537 PTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
             KPN +T +  +SAC+  G +  G  IH   +L+   G +  + +  A++D+  R GR+
Sbjct: 493 -LKPNSVTLVSVLSACARIGALSCGKEIHAH-ALRTGLGFDGFLPN--ALLDMYVRCGRM 548

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD--PDEGGYHVLLAN 652
             AW+  Q    E  +  +  +L          L  +  +++ E D  PDE  +  LL  
Sbjct: 549 EPAWN--QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCA 606

Query: 653 IYAAASMWDKLAKVRTIMEK 672
              +  + D L    ++  K
Sbjct: 607 CSRSGMVTDGLEYFESMEHK 626



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 168/346 (48%), Gaps = 3/346 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +   +IK+G   +      L+ +        +A  VF  +  K    +  M+ GY K 
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              + AV     M ++ V P       +L  C  +G + +G  +H      G +  +   
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++MY+KC  I++A ++F R+P ++++SW +I+ G   N  +  AL    +M     +
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLK 494

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + +T+VS+L A A +G+L  GK +H +A+R G      +  AL+DMY +CGR+E A   
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+  + ++V SWN ++  Y + G    A+ +F KM++  V P  +T    L AC+  G +
Sbjct: 555 FNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613

Query: 357 ERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
             G+ +   +  +  +  ++    S++ +  +  +++ A +   K+
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 120/248 (48%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           NS+I      G+ E+A+     M +  V     T +  L  C        G  VH  + +
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                 V + N+L+SM+ +   +  A  +F K+  + L SWN ++ GYA+ G  +EALN 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           + +M    I+PD +T   V+     L  +   + +H  VIR  FE +V V+ ALI MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG + +AR +FD M  R   +WN MI GY  + +    + LF  M E    P+ +T    
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 549 ISACSHSG 556
           ISAC   G
Sbjct: 303 ISACEALG 310


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 327/814 (40%), Positives = 474/814 (58%), Gaps = 61/814 (7%)

Query: 60  LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
           LP +            T +V+ +    +   A  V E +       ++ +++ + K   L
Sbjct: 77  LPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRL 136

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           D A++   RM      P  +   ++LK CG++   R G   HG +  NGF  ++F    +
Sbjct: 137 DSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNAL 196

Query: 180 VNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQNGFAELALDLVTRM----HE 232
           V MY++CG +EEA  +FD + +R   D++SWN+IV+   ++  A  ALDL ++M    HE
Sbjct: 197 VAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE 256

Query: 233 E--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           +    R D I+IV+ILPA  ++ ++   K VHG A+R G    V V  AL+D YAKCG +
Sbjct: 257 KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLM 316

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE---------------------------- 322
           E A  VF+ M+ ++VVSWN+M+A Y + GN E                            
Sbjct: 317 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 376

Query: 323 -------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL--------LD 367
                  EA+ +F++M+  G  P  VTI+  L ACA LG   +G  +H          LD
Sbjct: 377 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 436

Query: 368 QLKLGTDVSMT--NSLISMYSKCKKVDRAADIFS--KLQGKTLVSWNAMILGYAQNGRVN 423
               G D  +   N+LI MYSKC+    A  IF    L+ + +V+W  MI G+AQ G  N
Sbjct: 437 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 496

Query: 424 EALNYFCKMRSK--NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNV-FVM 479
           +AL  F +M S+   + P+++T+  ++ A A L+ IR  K IHA V+R   +E +  FV 
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 556

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             LIDMY+KCG V TAR +FD M+++   +W  M+ GYG HG G  A+++F+KM +    
Sbjct: 557 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 616

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+DITFL  + ACSH G+V++G+ YF S+  DYG+ P  +HY   +DLL R+GRL++AW 
Sbjct: 617 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWR 676

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            ++ MP+EP   V+ A+L AC++H NVEL E A N+L E++ +  G + L++NIYA A  
Sbjct: 677 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 736

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  +A++R +M+K G++K PGCS V+ +    SF+ G   HP S +IY  LE+LID IKA
Sbjct: 737 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 796

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYVP+TN ++HDV++  + NLL  HSEKLA+A+GLL +SPG  I I KNLRVCGDCH+A
Sbjct: 797 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSA 856

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             YIS +   EI+VRD  RFH FKNG CSCG YW
Sbjct: 857 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 167/568 (29%), Positives = 264/568 (46%), Gaps = 90/568 (15%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS--------LDLFAM-------- 176
           DV P   ++  LLK C     +    +IH Q+I +G          + L A+        
Sbjct: 34  DVYPS--HFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 88

Query: 177 ----TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
               TGVV  Y  CG  + A  + +R+     V WN ++    + G  + A+++  RM  
Sbjct: 89  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            G R D  T+  +L A   + S R G A HG     GF+S V +  ALV MY++CG +E 
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208

Query: 293 ARLVFDGMKSR---NVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTN-----VTI 343
           A ++FD +  R   +V+SWNS+++A+V+  N   A+ +F KM L    +PTN     ++I
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +  L AC  L  + +   VH   + ++ GT  DV + N+LI  Y+KC  ++ A  +F+ +
Sbjct: 269 VNILPACGSLKAVPQTKEVHG--NAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 326

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK----------------------- 438
           + K +VSWNAM+ GY+Q+G    A   F  MR +NI                        
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386

Query: 439 ------------PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF----------EKNV 476
                       P+  T++SV+ A A L        IHA  +++C           ++++
Sbjct: 387 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 446

Query: 477 FVMTALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
            V  ALIDMY+KC +   AR++FD   + ER+V TW VMI G+  +G    A++LF +M+
Sbjct: 447 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 506

Query: 535 EGP--TKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
             P    PN  T  C + AC+H   +  G  IH +      Y           ++D+  +
Sbjct: 507 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV-ANCLIDMYSK 565

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            G ++ A      M  +  I+    M G
Sbjct: 566 CGDVDTARHVFDSMSQKSAISWTSMMTG 593


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/809 (37%), Positives = 488/809 (60%), Gaps = 40/809 (4%)

Query: 44   ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            A  L VC +L+     +++   +I  G          L+ ++ K +      +VF+ + +
Sbjct: 280  ASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE 339

Query: 101  KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            +    +++++   A+F   +DA+   +RM+        +N   +L     + +I +G+E+
Sbjct: 340  RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGREL 399

Query: 161  HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
            HG L+ N  + D+   + +V+MY+KCG +EEA+++F  + ER+ VS+N ++AG+ Q G A
Sbjct: 400  HGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKA 459

Query: 221  ELALDLVTRMH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL+L   M  E+G + D  T  ++L   AN  +   G+ +H + +RA     + V T 
Sbjct: 460  EEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE 519

Query: 280  LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            LV MY++CGR+  A+ +F+ M  RN  SWNSMI  Y + G  +EA+R+F++M   G++P 
Sbjct: 520  LVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPD 579

Query: 340  NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD------- 392
              ++   L +C  L D ++G  +H  + +  +  +  +   L+ MY+KC  +D       
Sbjct: 580  CFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYD 639

Query: 393  ---------------------RAAD---IFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                                 RA D   +F +++ +    WN+++ GYA  G   E+ N+
Sbjct: 640  QTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNH 699

Query: 429  FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK-NVFVMTALIDMYA 487
            F +M   +I+ D  TMV+++   + L  + +   +H+L+I+  F   +V + TAL+DMY+
Sbjct: 700  FLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYS 759

Query: 488  KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
            KCGA+  AR +FD MN +++ +WN MI GY  HG  K A+ L+ +M +    PN++TFL 
Sbjct: 760  KCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLA 819

Query: 548  AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
             +SACSH+GLVEEG+  FTS+++DY IE   +HY  MVDLLGRAGRL +A +F++KMPIE
Sbjct: 820  ILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE 879

Query: 608  PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
            P ++ +GA+LGAC++HK++++G  AA RLFELDP   G +V+++NIYAAA  W ++  +R
Sbjct: 880  PEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIR 939

Query: 668  TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             +M+ KG++K PG S +E+ +E+  F++GS  HP+++ IY  L  L  + K  GY+PDT+
Sbjct: 940  QMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTS 999

Query: 728  ----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
                ++ D+++  +E  L  HSE+LA++ GL++    STI + KNLR+CGDCH ATK+IS
Sbjct: 1000 FILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFIS 1059

Query: 784  LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             +TGR II RD +RFH F+NG CSCGDYW
Sbjct: 1060 KITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 190/643 (29%), Positives = 321/643 (49%), Gaps = 42/643 (6%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           +  PS  +++ C +++++   R++   ++K+GL         LV  + ++  + DA    
Sbjct: 176 FTFPS--VIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           + I       ++ ++ GY K  S ++A     RM    V P  + +   L+VCG +    
Sbjct: 234 DEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 293

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GK++H +LI  GF  D F    +++MYAKC   E   K+FD M ER+ V+WN+I++  A
Sbjct: 294 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           Q G    AL L  RM E G + +   + SIL A A +  +  G+ +HG+ +R   +S + 
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ- 334
           + +ALVDMY+KCG VE A  VF  +  RN VS+N+++A YV+ G  EEA+ ++  M  + 
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSED 473

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G++P   T    L  CA+  +  +G  +H  L +  +  ++ +   L+ MYS+C +++ A
Sbjct: 474 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 533

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            +IF+++  +   SWN+MI GY QNG   EAL  F +M+   IKPD F++ S++ +   L
Sbjct: 534 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 593

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA----------------------- 491
           S  +  + +H  ++R+  E+   +   L+DMYAKCG+                       
Sbjct: 594 SDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653

Query: 492 ---VGTARA-----LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
              V + RA     LFD M +R+   WN ++ GY   GL K +   F +MLE   + + +
Sbjct: 654 SAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 713

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           T +  ++ CS    +E G    + + K   +   +    A+VD+  + G + +A      
Sbjct: 714 TMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDN 773

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           M     I  + AM+     H       K A  L+E  P +G Y
Sbjct: 774 MN-GKNIVSWNAMISGYSKHG----CSKEALILYEEMPKKGMY 811



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 190/685 (27%), Positives = 321/685 (46%), Gaps = 61/685 (8%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY-----HTMLKGYAKFASLDDAVSF 125
            +LFQ  L    C Y      +R F  +P+     +     HT      KF   D     
Sbjct: 6   NYLFQPSLNHFNCHY------SRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPT 59

Query: 126 LIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
            I  +   DV P+ Y  + L++ C D    +RGK IH Q+I NG++ D + MT ++ +YA
Sbjct: 60  SIHTKPASDVNPLPY--SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYA 117

Query: 185 KCGQIEE---AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           + G +++   A K+F+ MPER+L +WNT++  +A+       L L  RM   G   D  T
Sbjct: 118 RSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFT 177

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             S++ A   +  +   + +    ++AG +  + V  ALVD YA+ G ++ A    D ++
Sbjct: 178 FPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE 237

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VV+WN++IA YV+  + EEA  IF +ML  GV P N T   AL  C  L   + G  
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 297

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  L       D  + N+LI MY+KC   +    +F ++  +  V+WN++I   AQ G 
Sbjct: 298 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            N+AL  F +M+    K + F + S++ A A L+ I   + +H  ++R+    ++ + +A
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKP 540
           L+DMY+KCG V  A  +F  + ER+  ++N ++ GY   G  + A+EL++ M  E   +P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477

Query: 541 NDITFLCAISACSHSGLVEEG--IHYF---TSLKKDYGIEPVMDH--------------- 580
           +  TF   ++ C++     +G  IH      ++ K+  +E  + H               
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537

Query: 581 ----------YGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACKIHKNVE 627
                     + +M++   + G   EA    ++M    I+P      +ML +C    + +
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597

Query: 628 LGEKAANRLFELDPDEGG-YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
            G +  N +     +E G   V+L ++YA     D   KV     KK          V L
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKD---------VIL 648

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLE 711
            N + S +  S +   +K ++  +E
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQME 673


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/769 (39%), Positives = 476/769 (61%), Gaps = 5/769 (0%)

Query: 46   LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L++C    SL++ +R+  +II +G+        KLV ++     L    ++F+ I +  
Sbjct: 375  VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              L++ ++  YAK  +  ++VS   +M+   V    Y +T +LK    +G+++  K +HG
Sbjct: 435  VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             ++  GF  +   +  ++  Y K G +E A+ +FD + E D+VSWN+++ G   NGF+  
Sbjct: 495  YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
             L++  +M   G   D  T+VS+L A AN+G+L +G+A+HG+ ++A F   V  S  L+D
Sbjct: 555  GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MY+KCG +  A  VF  M    +VSW S IAAYV  G   +A+ +F +M  +GV P   T
Sbjct: 615  MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674

Query: 343  IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +   +HACA    L++G  VH  + +  +G+++ +TN+LI+MY+KC  V+ A  +FSK+ 
Sbjct: 675  VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734

Query: 403  GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
             K +VSWN MI GY+QN   NEAL  F  M+ K  KPD  TM  V+PA A L+ +   + 
Sbjct: 735  VKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGRE 793

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            IH  ++R  +  ++ V  AL+DMYAKCG +  A+ LFDM+ ++ + +W VMI GYG HG 
Sbjct: 794  IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 853

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            G  A+  FN+M     +P++ +F   ++ACSHSGL+ EG  +F S++ + G+EP ++HY 
Sbjct: 854  GNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 913

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             +VDLL R G L++A+ FI+ MPI+P  T++G +L  C+IH +V+L EK A  +FEL+PD
Sbjct: 914  CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPD 973

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               Y+V+LAN+YA A  W+++ K+R  M+K+G ++ PGCS +E+  + + F +G++KHPQ
Sbjct: 974  NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQ 1033

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLS-SHSEKLAIAFGLLNSSPGS 761
            +KRI   L  L  +++   Y      +   ED +++ ++   HSEK A+AFG+LN  PG 
Sbjct: 1034 AKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGR 1093

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
            T+ + KN RVCGDCH   K++S  T REI++RD +RFH FK+G+CSC D
Sbjct: 1094 TVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 299/733 (40%), Positives = 462/733 (63%), Gaps = 2/733 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S+F ++  L +A  VF  + ++    ++ ++ GYAK    D+A++   RM +  + P 
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG + ++ RG+E+H  +I  GF  D+  +  ++ MY KCG I  A  +FD
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RMP RD +SWN +++G+ +N      L L   M E     D +T+ S++ A   +G  R+
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VHGY ++ GF + V+V+ +L+ M++  G  + A +VF  M+ +++VSW +MI+ Y +
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G PE+A+  +  M  +GV P  +TI   L ACA LG L++GI +H+  D+  L + V +
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NSLI MYSKC+ +D+A ++F ++  K ++SW ++ILG   N R  EAL +F +M   ++
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSL 493

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T+VSV+ A A +  +   K IHA  +R+    + F+  AL+DMY +CG +  A  
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F+   E+ V +WN+++ GY   G G  AVELF+KM+E    P++ITF   + ACS SG+
Sbjct: 554 QFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G+ YF S++  + I P + HY ++VDLLGRAGRL +A++FI+KMPI+P   ++GA+L
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC+I++NVELGE AA  +FE+D    GY++LL N+YA +  WD++A+VR IM +  L  
Sbjct: 673 NACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTV 732

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ 737
            PGCS VE+  +VH+F +G   HPQ K I   LE   ++++A G     +S  D  D  +
Sbjct: 733 DPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASK 792

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +   HSE+LAIAFGL+N+ PG+ I + KNL +C +CHN  K+IS V  R I VRD  +
Sbjct: 793 AEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQ 852

Query: 798 FHCFKNGVCSCGD 810
           FH FK+GVCSCGD
Sbjct: 853 FHHFKDGVCSCGD 865



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 175/558 (31%), Positives = 280/558 (50%), Gaps = 10/558 (1%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           L+ A+  L  M+   V+     Y  LL++C        G  +H  +      L +     
Sbjct: 75  LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +++M+ + G + EA+ +F +M ERDL SWN +V G+A+ G+ + AL+L  RM   G R D
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T   +L     +  L  G+ VH + +R GF+S V+V  AL+ MY KCG + +ARLVFD
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+ +SWN+MI+ Y E     E +R+F  M +  V+P  +T+   + AC  LGD   
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  VH  + +     +VS+ NSLI M+S     D A  +FSK++ K LVSW AMI GY +
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           NG   +A+  +  M  + + PD  T+ SV+ A A L ++     +H    R+     V V
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             +LIDMY+KC  +  A  +F  +  ++V +W  +I G   +     A+  F +M+    
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-L 493

Query: 539 KPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
           KPN +T +  +SAC+  G +  G  IH   +L+   G +  + +  A++D+  R GR+  
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAH-ALRTGLGFDGFLPN--ALLDMYVRCGRMEP 550

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD--PDEGGYHVLLANIY 654
           AW+  Q    E  +  +  +L          L  +  +++ E D  PDE  +  LL    
Sbjct: 551 AWN--QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACS 608

Query: 655 AAASMWDKLAKVRTIMEK 672
            +  + D L    ++  K
Sbjct: 609 RSGMVTDGLEYFESMEHK 626



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 168/346 (48%), Gaps = 3/346 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +   +IK+G   +      L+ +        +A  VF  +  K    +  M+ GY K 
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              + AV     M ++ V P       +L  C  +G + +G  +H      G +  +   
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVA 435

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++MY+KC  I++A ++F R+P ++++SW +I+ G   N  +  AL    +M     +
Sbjct: 436 NSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLK 494

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + +T+VS+L A A +G+L  GK +H +A+R G      +  AL+DMY +CGR+E A   
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+  + ++V SWN ++  Y + G    A+ +F KM++  V P  +T    L AC+  G +
Sbjct: 555 FNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613

Query: 357 ERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
             G+ +   +  +  +  ++    S++ +  +  +++ A +   K+
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 120/248 (48%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           NS+I      G+ E+A+     M +  V     T +  L  C        G  VH  + +
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                 V + N+L+SM+ +   +  A  +F K+  + L SWN ++ GYA+ G  +EALN 
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           + +M    I+PD +T   V+     L  +   + +H  VIR  FE +V V+ ALI MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG + +AR +FD M  R   +WN MI GY  + +    + LF  M E    P+ +T    
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 549 ISACSHSG 556
           ISAC   G
Sbjct: 303 ISACEALG 310


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 309/790 (39%), Positives = 481/790 (60%), Gaps = 10/790 (1%)

Query: 28   LSQRAYIPSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
            +SQ++ +    Y    + +L++C     L+E + +  +I  +G+  + +   KLV ++  
Sbjct: 443  MSQKSELDLNAY----SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVS 498

Query: 85   YNSLSDAARVFEPI-PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
              +L +  R+F+ I  D    L++ M+  YAK     +++    +M+   +    Y ++ 
Sbjct: 499  CGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSC 558

Query: 144  LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
            +LK    +G +   K IHG +   GF      +  ++  Y K G+++ A+K+FD + +RD
Sbjct: 559  ILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRD 618

Query: 204  LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
            +VSWN++++G   NGF+  AL+   +M       D  T+V+ + A ANVGSL +G+A+HG
Sbjct: 619  VVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHG 678

Query: 264  YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
              ++A F   V  +  L+DMY+KCG +  A   F+ M  + VVSW S+IAAYV  G  ++
Sbjct: 679  QGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDD 738

Query: 324  AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
            A+R+F +M  +GV P   ++   LHACA    L++G  VH  + +  +   + ++N+L+ 
Sbjct: 739  AIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMD 798

Query: 384  MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            MY+KC  ++ A  +FS++  K +VSWN MI GY++N   NEAL  F +M+ K  +PD  T
Sbjct: 799  MYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESRPDGIT 857

Query: 444  MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
            M  ++PA   L+ +   + IH  ++R+ +   + V  ALIDMY KCG++  AR LFDM+ 
Sbjct: 858  MACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP 917

Query: 504  ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            E+ + TW VMI G G HGLG  A+  F KM     KP++ITF   + ACSHSGL+ EG  
Sbjct: 918  EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG 977

Query: 564  YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            +F S+  +  +EP ++HY  MVDLL R G L++A++ I+ MPI+P  T++GA+L  C+IH
Sbjct: 978  FFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIH 1037

Query: 624  KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
             +VEL EK A  +FEL+PD  GY+VLLANIYA A  W+++ K+R  + K+GL+K+PGCS 
Sbjct: 1038 HDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSW 1097

Query: 684  VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLS 742
            +E++ +  +F S  T HPQ+K I++ L  L  ++K  G+ P    ++ +  D  +E  L 
Sbjct: 1098 IEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALC 1157

Query: 743  SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
             HSEKLA+AFG+LN   G TI + KNLRVC DCH   K++S  T REII+RD +RFH FK
Sbjct: 1158 GHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFK 1217

Query: 803  NGVCSCGDYW 812
            +G CSC D+W
Sbjct: 1218 DGFCSCRDFW 1227


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 339/852 (39%), Positives = 482/852 (56%), Gaps = 83/852 (9%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCD--------------QHLF------QTKLVSLFC 83
           A LL+ C S+  +R+I   II  GL                 H +       T +V+ + 
Sbjct: 35  ASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYL 94

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
              + SDA  V E +       ++ +++ + +   LD A+    RM      P  +   Y
Sbjct: 95  ACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPY 154

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER- 202
            LK CG++   R G   HG +  NGF  ++F    +V MY++ G +E+A  +FD +  + 
Sbjct: 155 ALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKG 214

Query: 203 --DLVSWNTIVAGFAQNGFAELALDLVTRM----HEEG--RRGDFITIVSILPAVANVGS 254
             D++SWN+IVA   +      ALDL + M    HE+    R D I+IV+ILPA A++ +
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKA 274

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM--- 311
           L   K +H YA+R G  +   V  AL+D YAKCG ++ A  VF+ M+ ++VVSWN+M   
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTG 334

Query: 312 --------------------------------IAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
                                           IA Y + G  +EA+  FQ+M+  G EP 
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPN 394

Query: 340 NVTIMEALHACADLGDLERGIFVH-----KLLDQLKLGTDVSMT-------NSLISMYSK 387
           +VTI+  L ACA LG L +G+  H     K L  L                N+LI MYSK
Sbjct: 395 SVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454

Query: 388 CKKVDRAADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK--NIKPDSFT 443
           C+    A  IF+ +  + + +V+W  MI GYAQ G  N+AL  F +M SK   + P+++T
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYT 514

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSC-FEKNV-FVMTALIDMYAKCGAVGTARALFDM 501
           +  ++ A A LS +R  K IHA V R   +E +V FV   LIDMY+KCG V TAR +FD 
Sbjct: 515 ISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDS 574

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M +R+  +W  M+ GYG HG GK A+++F+KM +    P+DI+FL  + ACSHSG+V++G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           + YF  ++ DYG+     HY  ++DLL R+GRL++AW  IQ+MP+EP   ++ A+L AC+
Sbjct: 635 LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +H NVEL E A N+L  +  +  G + L++NIYA A  W  +A++R +M+K G++K PGC
Sbjct: 695 VHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGC 754

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENL 740
           S V+ K    SF+ G   HP S  IY+ LE LI  IK  GYVP+TN ++HDV+D  + NL
Sbjct: 755 SWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNL 814

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L+ HSEKLA+A+GLL +SPG  I I KNLRVCGDCH+A  YIS +   EIIVRD  RFH 
Sbjct: 815 LTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHH 874

Query: 801 FKNGVCSCGDYW 812
           FKNG CSCG YW
Sbjct: 875 FKNGSCSCGGYW 886


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 289/736 (39%), Positives = 459/736 (62%), Gaps = 1/736 (0%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            +++++ K  S+ +A  VF+ +  K    +  ++ GYA     + A     +M+ + V P 
Sbjct: 285  ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344

Query: 138  VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               Y  +L        ++ GK +H  ++  G   DL   T +V MYAKCG  ++  ++F+
Sbjct: 345  RITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFE 404

Query: 198  RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            ++  RDL++WNT++ G A+ G  E A ++  +M  EG   + IT V +L A  N  +L  
Sbjct: 405  KLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHW 464

Query: 258  GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            G+ +H   ++ GF   ++V  AL+ MYA+CG ++ ARL+F+ M  ++++SW +MI    +
Sbjct: 465  GREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAK 524

Query: 318  GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             G   EA+ +FQ M   G++P  VT    L+AC+    L+ G  +H+ + +  L TD  +
Sbjct: 525  SGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHV 584

Query: 378  TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             N+L++MYS C  V  A  +F ++  + +V++NAMI GYA +    EAL  F +++ + +
Sbjct: 585  ANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 644

Query: 438  KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            KPD  T ++++ A A    + +AK IH+LV++  +  +  +  AL+  YAKCG+   A  
Sbjct: 645  KPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALL 704

Query: 498  LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            +FD M +R+V +WN +I G   HG G+  ++LF +M     KP+ +TF+  +SACSH+GL
Sbjct: 705  VFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGL 764

Query: 558  VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
            +EEG  YF S+ +D+GI P ++HYG MVDLLGRAG+L+E    I+ MP +    ++GA+L
Sbjct: 765  LEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALL 824

Query: 618  GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            GAC+IH NV + E+AA    +LDPD    +V L+++YAAA MWD  AK+R +ME++G+ K
Sbjct: 825  GACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTK 884

Query: 678  TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
             PG S +E+ +++H F +    HP+S++IY  L+ L   +K  GYVPDT S+ HDV++  
Sbjct: 885  EPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGE 944

Query: 737  QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
            +EN +  HSE+LAIA+GL+++ PG+ I I KNLRVC DCH ATK+I+ +  REI+ RD++
Sbjct: 945  KENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVN 1004

Query: 797  RFHCFKNGVCSCGDYW 812
            RFH FK+GVCSCGDYW
Sbjct: 1005 RFHHFKDGVCSCGDYW 1020



 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 186/586 (31%), Positives = 329/586 (56%), Gaps = 13/586 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIK-SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI--P 99
           +L+ C  +K+L   R +   II+   + DQ+     L++++ +  S+ +A +V+  +   
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA-LINMYIQCGSIEEARQVWNKLNHT 205

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           ++    ++ M+ GY ++  +++A+  L  M+   +A        LL  C     +  G+E
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGRE 265

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH + +      D+     ++NMYAKCG I EA ++FD+M  + +VSW  I+ G+A  G 
Sbjct: 266 IHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGH 325

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           +E+A ++  +M +EG   + IT +++L A +   +L+ GK VH + + AG +S + V TA
Sbjct: 326 SEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTA 385

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           LV MYAKCG  +  R VF+ + +R++++WN+MI    EGGN EEA  I+ +M  +G+ P 
Sbjct: 386 LVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPN 445

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
            +T +  L+AC +   L  G  +H  + +     D+S+ N+LISMY++C  +  A  +F+
Sbjct: 446 KITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFN 505

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           K+  K ++SW AMI G A++G   EAL  F  M+   +KP+  T  S++ A +  + + +
Sbjct: 506 KMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDW 565

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + IH  VI +    +  V   L++MY+ CG+V  AR +FD M +R +  +N MI GY  
Sbjct: 566 GRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAA 625

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE--EGIHYFTSLKKDYGIEPV 577
           H LGK A++LF+++ E   KP+ +T++  ++AC++SG +E  + IH    LK  Y  +  
Sbjct: 626 HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLV-LKDGYLSDTS 684

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           + +  A+V    + G  ++A     KM ++  +  + A++G C  H
Sbjct: 685 LGN--ALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 166/540 (30%), Positives = 287/540 (53%), Gaps = 9/540 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  +LK C +V ++  G+E+H  +I +   LD + +  ++NMY +CG IEEA ++++++
Sbjct: 143 DYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKL 202

Query: 200 --PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
              ER + SWN +V G+ Q G+ E AL L+  M + G      T + +L +  +  +L  
Sbjct: 203 NHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALEC 262

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H  AM+A     VNV+  +++MYAKCG +  AR VFD M++++VVSW  +I  Y +
Sbjct: 263 GREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD 322

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G+ E A  IFQKM  +GV P  +T +  L+A +    L+ G  VH  +      +D+++
Sbjct: 323 CGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L+ MY+KC        +F KL  + L++WN MI G A+ G   EA   + +M+ + +
Sbjct: 383 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGM 442

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+  T V ++ A    + + + + IH+ V++  F  ++ V  ALI MYA+CG++  AR 
Sbjct: 443 MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL 502

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           LF+ M  + + +W  MI G    GLG  A+ +F  M +   KPN +T+   ++ACS    
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           ++ G      +  + G+         +V++    G + +A     +M  +  I  + AM+
Sbjct: 563 LDWGRRIHQQV-IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMI 620

Query: 618 GACKIHKNVELGEKAANRLFE--LDPDEGGYHVLLANIYAAASM-WDKLAKVRTIMEKKG 674
           G    H   +   K  +RL E  L PD+  Y  +L     + S+ W K  ++ +++ K G
Sbjct: 621 GGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK--EIHSLVLKDG 678



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 261/496 (52%), Gaps = 2/496 (0%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS 87
           + Q   +P+RI             +LK  + +   I+ +G        T LV ++ K  S
Sbjct: 336 MQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGS 395

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
             D  +VFE + ++    ++TM+ G A+  + ++A     +M+ + + P    Y  LL  
Sbjct: 396 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNA 455

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C +   +  G+EIH +++ +GF  D+     +++MYA+CG I++A  +F++M  +D++SW
Sbjct: 456 CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISW 515

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
             ++ G A++G    AL +   M + G + + +T  SIL A ++  +L  G+ +H   + 
Sbjct: 516 TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIE 575

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           AG  +  +V+  LV+MY+ CG V+ AR VFD M  R++V++N+MI  Y      +EA+++
Sbjct: 576 AGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKL 635

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F ++ ++G++P  VT +  L+ACA+ G LE    +H L+ +    +D S+ N+L+S Y+K
Sbjct: 636 FDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAK 695

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C     A  +F K+  + ++SWNA+I G AQ+GR  + L  F +M+ + IKPD  T VS+
Sbjct: 696 CGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSL 755

Query: 448 IPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           + A +   ++   +     + R       +     ++D+  + G +    AL   M  + 
Sbjct: 756 LSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQA 815

Query: 506 HVTTWNVMIDGYGTHG 521
           +   W  ++     HG
Sbjct: 816 NTRIWGALLGACRIHG 831



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 209/399 (52%), Gaps = 4/399 (1%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+D+V  + ++G R +    + +L     V  L  G+ VH + ++           AL++
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184

Query: 283 MYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           MY +CG +E AR V++ +    R V SWN+M+  YV+ G  EEA+++ ++M   G+    
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T M  L +C     LE G  +H    + +L  DV++ N +++MY+KC  +  A ++F K
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K++VSW  +I GYA  G    A   F KM+ + + P+  T ++V+ A +  + +++ 
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H+ ++ +  E ++ V TAL+ MYAKCG+    R +F+ +  R +  WN MI G    
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  + A E++++M      PN IT++  ++AC +   +  G    + + KD G    +  
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD-GFMFDISV 483

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
             A++ +  R G + +A     KM +   I  + AM+G 
Sbjct: 484 QNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 171/355 (48%), Gaps = 7/355 (1%)

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           + AM + Q +  QG    +   M+ L  C ++ DL  G  VH+ + Q     D    N+L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 382 ISMYSKCKKVDRAADIFSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           I+MY +C  ++ A  +++KL    +T+ SWNAM++GY Q G + EAL    +M+   +  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
              T + ++ +    S +   + IH   +++    +V V   +++MYAKCG++  AR +F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M  + V +W ++I GY   G  + A E+F KM +    PN IT++  ++A S    ++
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G    + +  + G E  +    A+V +  + G   +     +K+ +   +  +  M+G 
Sbjct: 363 WGKTVHSHI-LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 420

Query: 620 CKIHKNVELGEKAANRLFE--LDPDEGGYHVLL-ANIYAAASMWDKLAKVRTIME 671
                N E   +  +++    + P++  Y +LL A +   A  W +    R + +
Sbjct: 421 LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 301/770 (39%), Positives = 473/770 (61%), Gaps = 4/770 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL   T+L +L +I   +I  G+       TKL   F    +++   ++F  +      L
Sbjct: 20  LLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFL 79

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ +++G++       ++     +R   ++ P  + Y + +     + + R G  +H   
Sbjct: 80  FNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           IV+G + +LF  + +V++Y K  + E A K+FD MPERD V WNT+++GF++N + E ++
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +   M + G   D  T+ ++L AVA +   R+G  +   A + G  S V V T L+ +Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KCG+    R++FD +   +++S+N+MI+ Y      E A+ +F+++L  G    + T++
Sbjct: 260 SKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             +        L+    +  L  ++ +    S++ +L ++Y +  +V  A  +F +   K
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           +L SWNAMI GY QNG  + A++ F +M  + + P+  T+ S++ A A+L  +   KW+H
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L+     E NV+V TAL+DMYAKCG++  AR LFD+M +++V TWN MI GYG HG GK
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A++LF +ML+    P  +TFL  + ACSHSGLV EG   F S+  +YG +P+ +HY  M
Sbjct: 499 EALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACM 558

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VD+LGRAG+L  A +FI++MP+EPG  V+GA+LGAC IHKN E+   A+ RLF+LDP+  
Sbjct: 559 VDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENV 618

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           GY+VLL+NIY+    + K A VR +++K+ L KTPGC+L+E+ ++ + F SG   HPQ+ 
Sbjct: 619 GYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQAT 678

Query: 705 RIYTFLETLIDEIKAAGYVPD--TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            I+  LE L  +++ AGY  +  T ++HDVED  +E +++ HSEKLAIAFGL+++ PG+ 
Sbjct: 679 AIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTE 738

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I I KNLRVC DCH ATK+IS +T R I+VRD +RFH FKNG+CSCGDYW
Sbjct: 739 IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 301/770 (39%), Positives = 473/770 (61%), Gaps = 4/770 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL   T+L +L +I   +I  G+       TKL   F    +++   ++F  +      L
Sbjct: 20  LLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFL 79

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ +++G++       ++     +R   ++ P  + Y + +     + + R G  +H   
Sbjct: 80  FNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           IV+G + +LF  + +V++Y K  + E A K+FD MPERD V WNT+++GF++N + E ++
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +   M + G   D  T+ ++L AVA +   R+G  +   A + G  S V V T L+ +Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KCG+    R++FD +   +++S+N+MI+ Y      E A+ +F+++L  G    + T++
Sbjct: 260 SKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLV 319

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             +        L+    +  L  ++ +    S++ +L ++Y +  +V  A  +F +   K
Sbjct: 320 GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 379

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           +L SWNAMI GY QNG  + A++ F +M  + + P+  T+ S++ A A+L  +   KW+H
Sbjct: 380 SLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L+     E NV+V TAL+DMYAKCG++  AR LFD+M +++V TWN MI GYG HG GK
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A++LF +ML+    P  +TFL  + ACSHSGLV EG   F S+  +YG +P+ +HY  M
Sbjct: 499 EALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACM 558

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VD+LGRAG+L  A +FI++MP+EPG  V+GA+LGAC IHKN E+   A+ RLF+LDP+  
Sbjct: 559 VDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENV 618

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           GY+VLL+NIY+    + K A VR +++K+ L KTPGC+L+E+ ++ + F SG   HPQ+ 
Sbjct: 619 GYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQAT 678

Query: 705 RIYTFLETLIDEIKAAGYVPD--TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            I+  LE L  +++ AGY  +  T ++HDVED  +E +++ HSEKLAIAFGL+++ PG+ 
Sbjct: 679 AIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTE 738

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I I KNLRVC DCH ATK+IS +T R I+VRD +RFH FKNG+CSCGDYW
Sbjct: 739 IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 324/800 (40%), Positives = 468/800 (58%), Gaps = 63/800 (7%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +V+ +    +  DA  V E +       ++ +++ + K   LD A+    RM      
Sbjct: 87  TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +   Y LK CG++     G+ +HG +  NGF  ++F    +V MY++CG +E+A  +
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206

Query: 196 FDRMPER---DLVSWNTIVAGFAQNGFAELALDLVTRM----HEEG--RRGDFITIVSIL 246
           FD +  +   D++SWN+IVA   +      AL+L + M    HE+    R D I+IV+IL
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           PA A++ +L   K +H YA+R G  +   V  AL+D YAKCG +  A  VF+ M+ ++VV
Sbjct: 267 PACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVV 326

Query: 307 SWNSMIAAYVEGGN-----------------------------------PEEAMRIFQKM 331
           SWN+M+  Y + GN                                    +EA+  FQ+M
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVH-----KLLDQLKLGTD-------VSMTN 379
           +  G EP +VTI+  L ACA LG L +G+ +H     K L  L            + + N
Sbjct: 387 ILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYN 446

Query: 380 SLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-- 435
           +LI MYSKC+    A  IF  +  + + +V+W  MI GYAQ G  N+AL  F +M SK  
Sbjct: 447 ALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPY 506

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNV-FVMTALIDMYAKCGAVG 493
            + P+++T+  ++ A A L+ +R  K IHA V R   +E +V FV   LIDMY+KCG V 
Sbjct: 507 AVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVD 566

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           TAR +FD M +R+  +W  M+ GYG HG GK A+++F+KM +    P+DI+FL  + ACS
Sbjct: 567 TARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS 626

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           HSG+V++G++YF  +++DY +    +HY  ++DLL R GRL++AW  IQ+MP+EP   ++
Sbjct: 627 HSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIW 686

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            A+L AC++H NVEL E A N+L  +  +  G + L++NIYA A  W  +A++R +M+K 
Sbjct: 687 VALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKS 746

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
           G++K PGCS V+ K    SF+ G   HP S  IY+ LE LI  IK  GYVP+TN ++HDV
Sbjct: 747 GIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDV 806

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           +D  + NLLS HSEKLA+A+GLL +SPG  I I KNLRVCGDCH+A  YIS +   EIIV
Sbjct: 807 DDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIV 866

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FKNG CSCG YW
Sbjct: 867 RDSSRFHHFKNGSCSCGGYW 886


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 311/755 (41%), Positives = 469/755 (62%), Gaps = 8/755 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L++ +G        T+LV+L+     +S +   F+ IP K    +++M+  Y       +
Sbjct: 141 LLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHE 200

Query: 122 AVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           A+  F   +   ++ P  Y +  +LK CG + +   G++IH      GF  ++F    ++
Sbjct: 201 AIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLI 257

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY++ G    A  +FD MP RD+ SWN +++G  QNG A  ALD++  M  EG + +F+
Sbjct: 258 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 317

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+VSILP    +G +     +H Y ++ G +  + VS AL++MYAK G +E AR  F  M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +VVSWNS+IAAY +  +P  A   F KM   G +P  +T++      A   D +   
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437

Query: 361 FVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            VH  ++ +  L  DV + N+++ MY+K   +D A  +F  +  K ++SWN +I GYAQN
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 497

Query: 420 GRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           G  +EA+  +  M   K I P+  T VS++PA A +  ++    IH  VI++    +VFV
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            T LID+Y KCG +  A +LF  + +    TWN +I  +G HG  +  ++LF +ML+   
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 617

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           KP+ +TF+  +SACSHSG VEEG   F  L ++YGI+P + HYG MVDLLGRAG L  A+
Sbjct: 618 KPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           DFI+ MP++P  +++GA+LGAC+IH N+ELG+ A++RLFE+D    GY+VLL+NIYA   
Sbjct: 677 DFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 736

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W+ + KVR++  ++GL+KTPG S +E+  +V  FY+G+  HP+ K IY  L  L  ++K
Sbjct: 737 KWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 796

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
           + GY+PD + +  DVE+  +E++L+SHSE+LAIAFG++++ P S I I KNLRVCGDCHN
Sbjct: 797 SLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHN 856

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ATK+IS +T REI+VRD +RFH FK+G+CSCGDYW
Sbjct: 857 ATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 271/512 (52%), Gaps = 24/512 (4%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            K +H  L+V G    +F  T +VN+YA  G +  +   FD++P++D+ +WN++++ +  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 217 NGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           NG    A+    ++      R DF T   +L A    G+L  G+ +H +A + GF   V 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRKIHCWAFKLGFQWNVF 251

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V+ +L+ MY++ G    AR +FD M  R++ SWN+MI+  ++ GN  +A+ +  +M  +G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++   VT++  L  C  LGD+   + +H  + +  L  D+ ++N+LI+MY+K   ++ A 
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
             F ++    +VSWN++I  Y QN     A  +F KM+    +PD  T+VS+   +A+  
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 456 VIRYAKWIHALVI-RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             + ++ +H  ++ R    ++V +  A++DMYAK G + +A  +F+++  + V +WN +I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491

Query: 515 DGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYF-----TSL 568
            GY  +GL   A+E++  M E     PN  T++  + A +H G +++G+        T+L
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
             D  +         ++D+ G+ GRL +A     ++P E  +T + A++    IH + E 
Sbjct: 552 HLDVFVAT------CLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEK 604

Query: 629 GEKAANRLFE--LDPDEGGYHVLLANIYAAAS 658
             K    + +  + PD    HV   ++ +A S
Sbjct: 605 TLKLFGEMLDEGVKPD----HVTFVSLLSACS 632



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 269/538 (50%), Gaps = 15/538 (2%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L+ C +L + R+I     K G          L+ ++ ++     A  +F+ +P +    
Sbjct: 224 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ M+ G  +  +   A+  L  MR + +         +L VC  +G+I     IH  +I
Sbjct: 284 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            +G   DLF    ++NMYAK G +E+A K F +M   D+VSWN+I+A + QN     A  
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDM 283
              +M   G + D +T+VS+   VA     +  ++VHG+ MR G+  + +V +  A+VDM
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV-IGNAVVDM 462

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNV 341
           YAK G +++A  VF+ +  ++V+SWN++I  Y + G   EA+ ++ KM+++  E  P   
Sbjct: 463 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQG 521

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T +  L A A +G L++G+ +H  + +  L  DV +   LI +Y KC ++  A  +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             ++ V+WNA+I  +  +G   + L  F +M  + +KPD  T VS++ A +    +   K
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH 520
           W   L+     + ++     ++D+  + G +  A     DM  +   + W  ++     H
Sbjct: 642 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 701

Query: 521 G---LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G   LGK A +   ++ E  +K  ++ +   +S    +    EG+    SL ++ G++
Sbjct: 702 GNIELGKFASD---RLFEVDSK--NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 754



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +AK +HAL++ +   +++F+ T L+++YA  G V  +R  FD + ++ V  WN MI  Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 519 THGLGKAAVELFNK-MLEGPTKPNDITFLCAISAC 552
            +G    A+  F + +L    +P+  TF   + AC
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 228


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 294/772 (38%), Positives = 477/772 (61%), Gaps = 6/772 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C    S+++ RR+  +I  SG+    +   KLV ++ K   L +   VF+ + +  
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ M+  Y+   +  ++++   +M    + P  Y ++ +LK    V  +  G+++HG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +   GF+     +  +++ Y    ++  A K+FD + +RD++SWN++++G+ +NG  + 
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALV 281
            +++  +M   G   D  T+V++  A AN+G+L +GK +H Y+++A   D  V  +  L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY+KCG + +A  VF+ M  + VVSW SMI  YV  G  + A+++F +M  +GV P   
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +   L+ACA  G+L+ G  VH  + +  L T+  ++N+L  MY+KC  +  A D+FS +
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + K ++SWN MI GY +N   NEAL  F +M+ ++ KPD  T+  ++PA A L+ +   +
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGR 574

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH   +R+ + ++ +V  A++DMY KCG +  AR+LFDM+  + + +W VMI GYG HG
Sbjct: 575 EIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHG 634

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  A+  FN+M     +P++++F+  + ACSHSGL++EG   F  +KK+  IEP ++HY
Sbjct: 635 YGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHY 694

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLL R G L +A  FI+ MPI+P  T++GA+L  C+IH +V+L EK A R+FEL+P
Sbjct: 695 ACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEP 754

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GY+VLLANIYA A  W+++ K+R  + ++GL+K PGCS +E+K +++ F +G    P
Sbjct: 755 ENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKP 814

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q+K+I   L+ L  ++K  GY P T  ++ + ++  +E  L  HSEKLA+AFG+LN  PG
Sbjct: 815 QAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPG 874

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI + KNLRVCGDCH   K++S    REII+RD  RFH FK+G CSC  YW
Sbjct: 875 KTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 286/543 (52%), Gaps = 21/543 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L++C +   IR G+ +   +  +G  +D      +V MY KCG ++E   +FD++ 
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E  +  WN +++ ++ +G    +++L  +M E G + +  T  SIL   A V  +  G+ 
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHG   + GF+S   V  +L+  Y    +V  A+ +FD +  R+V+SWNSMI+ YV+ G 
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTN 379
            +  + IF KML  GV+    T++    ACA++G L  G  +H   +    L  +V   N
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ MYSKC  ++ A  +F ++  KT+VSW +MI GY + G  + A+  F +M+S+ + P
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D + + S++ A A    ++  K +H  +  +  E N FV  AL DMYAKCG++  A  +F
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M ++ V +WN MI GY  + L   A+ LF +M +  +KP+  T  C + AC+    ++
Sbjct: 513 SHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALD 571

Query: 560 EG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           +G  IH + +L+  Y  +  + +  A+VD+  + G L  A      +P    +  +  M+
Sbjct: 572 KGREIHGY-ALRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMI 627

Query: 618 GACKIHKNVELGEKAAN-----RLFELDPDEGGYHVLLANIYAA--ASMWDKLAKVRTIM 670
               +H     G +A N     R+  ++PDE  +  +L   YA   + + D+  K+  IM
Sbjct: 628 AGYGMHG---YGSEAINTFNQMRMTGIEPDEVSFISIL---YACSHSGLLDEGWKIFNIM 681

Query: 671 EKK 673
           +K+
Sbjct: 682 KKE 684



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 2/149 (1%)

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I+ + + G +  A+   C  ++ N    ++   S++   AE   IR  + + +++  S  
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRSIIESSGV 181

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             +  +   L+ MY KCG +   R +FD ++E  +  WN+MI  Y   G    ++ LF +
Sbjct: 182 MIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQ 241

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEG 561
           MLE   KPN  TF   +   +    VEEG
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEG 270


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 299/769 (38%), Positives = 476/769 (61%), Gaps = 5/769 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C    SL++ +R+  +II +G+        KLV ++     L    ++F+ I +  
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ ++  YAK  +  ++VS   +M+   V    Y +T +LK    +G+++  K +HG
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++  GF  +   +  ++  Y K G +E A+ +FD + E D+VSWN+++ G   NGF+  
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L++  +M   G   D  T+VS+L A AN+G+L +G+A+HG+ ++A F   V  S  L+D
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KCG +  A  VF  M    +VSW S+IAAYV  G   +A+ +F +M  +GV P   T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   +HACA    L++G  VH  + +  +G+++ +TN+LI+MY+KC  V+ A  +FSK+ 
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +VSWN MI GY+QN   NEAL  F  M+ K  KPD  TM  V+PA A L+ +   + 
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGRE 518

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  ++R  +  ++ V  AL+DMYAKCG +  A+ LFDM+ ++ + +W VMI GYG HG 
Sbjct: 519 IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 578

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A+  FN+M     +P++ +F   ++ACSHSGL+ EG  +F S++ + G+EP ++HY 
Sbjct: 579 GNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYA 638

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VDLL R G L++A+ FI+ MPI+P  T++G +L  C+IH +V+L EK A  +FEL+PD
Sbjct: 639 CVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPD 698

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
              Y+V+LAN+YA A  W+++ K+R  M+K+G ++ PGCS +E+  + + F +G++KHPQ
Sbjct: 699 NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQ 758

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLS-SHSEKLAIAFGLLNSSPGS 761
           +K+I   L  L  +++   Y      +   ED +++ ++   HSEK A+AFG+LN  PG 
Sbjct: 759 AKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGR 818

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           T+ + KN RVCGDCH   K++S  T  EI++RD +RFH FK+G+CSC D
Sbjct: 819 TVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/743 (42%), Positives = 457/743 (61%), Gaps = 20/743 (2%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFA--SLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
           LS A  +F+ IP      Y+ +++ Y+  +  +  D +    RM    VAP  Y + + L
Sbjct: 73  LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           K C  + +   G+ IH   I  G   DLF  T +++MY KC  + +A  +F  MP RDLV
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192

Query: 206 SWNTIVAGFAQNGFAELALD--LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +WN ++AG+A +G    A+   L  +M     R +  T+V++LP +A  G+L  G +VH 
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252

Query: 264 YAMRAGFDSIVN----------VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           Y +RA   S  N          + TAL+DMYAKCG +  AR VFD M +RN V+W+++I 
Sbjct: 253 YRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312

Query: 314 AYVEGGNPEEAMRIFQKMLDQGV---EPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
            +V      +A  +F+ ML QG+    PT  +I  AL ACA L  L  G  +H LL +  
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +  D++  NSL+SMY+K   +D+A  +F ++  K  VS++A++ GY QNGR  EA   F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           KM++ N++PD+ TMVS+IPA + L+ +++ +  H  VI         +  ALIDMYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            +  +R +F+MM  R + +WN MI GYG HGLGK A  LF +M      P+ +TF+C +S
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSHSGLV EG H+F  ++  YG+ P M+HY  MVDLL R G L+EA++FIQ MP+   +
Sbjct: 551 ACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V+ A+LGAC+++KN++LG+K +  + EL P+  G  VLL+NIY+AA  +D+ A+VR I 
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
           + +G +K+PGCS +E+   +H+F  G   HPQS  IY  L+ ++  IK  GY PDT+ + 
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVL 730

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            D+E+  +E  L  HSEKLAIA+G+L+ S   TI + KNLRVCGDCH   K+ISL+  R 
Sbjct: 731 QDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRA 790

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           IIVRD +RFH FKNG CSCGD+W
Sbjct: 791 IIVRDANRFHHFKNGQCSCGDFW 813



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/567 (26%), Positives = 265/567 (46%), Gaps = 34/567 (5%)

Query: 9   LSVFTNSTPTQT---LHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPL 62
           +  +++S+PT     LH ++  L  R  +    Y  P AL  + C++L +    R I   
Sbjct: 95  IRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFPFAL--KACSALADHHCGRAIHRH 150

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            I +GL       T L+ ++ K   L DAA +F  +P +    ++ ML GYA       A
Sbjct: 151 AIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHA 210

Query: 123 VSFLI--RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI----------VNGFS 170
           V+ L+  +M+   + P       LL +    G + +G  +H   I           +  +
Sbjct: 211 VAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLT 270

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +   T +++MYAKCG +  A ++FD MP R+ V+W+ ++ GF        A  L   M
Sbjct: 271 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 330

Query: 231 HEEGRRGDFI---TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             +G    F+   +I S L A A++  LR+G+ +H    ++G  + +    +L+ MYAK 
Sbjct: 331 LAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 388

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G ++ A  +FD M  ++ VS++++++ YV+ G  EEA  +F+KM    VEP   T++  +
Sbjct: 389 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            AC+ L  L+ G   H  +    L ++ S+ N+LI MY+KC ++D +  +F+ +  + +V
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 508

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS-VIRYAKWIHAL 466
           SWN MI GY  +G   EA   F +M +    PD  T + ++ A +    VI    W H +
Sbjct: 509 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDG---YGTHGL 522
                    +     ++D+ ++ G +  A      M  R  V  W  ++     Y    L
Sbjct: 569 RHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 628

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAI 549
           GK    +  ++  GP    +   L  I
Sbjct: 629 GKKVSRMIQEL--GPEGTGNFVLLSNI 653



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 153/315 (48%), Gaps = 14/315 (4%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C SL  LR   ++  L+ KSG+         L+S++ K   +  A  +F+ +  K  
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 406

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  ++ GY +    ++A     +M+  +V P       L+  C  +  ++ G+  HG 
Sbjct: 407 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 466

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G + +      +++MYAKCG+I+ + ++F+ MP RD+VSWNT++AG+  +G  + A
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVST 278
             L   M+  G   D +T + +L A ++ G +  GK       HGY +    +  +    
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI---- 582

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +VD+ ++ G ++ A      M  R +V  W +++ A     N +   ++ + + + G E
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642

Query: 338 PT-NVTIMEALHACA 351
            T N  ++  +++ A
Sbjct: 643 GTGNFVLLSNIYSAA 657


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/743 (42%), Positives = 455/743 (61%), Gaps = 20/743 (2%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFA--SLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
           LS A  +F+ IP      Y+ +++ Y+  +  +  D +    RM    VAP  Y + + L
Sbjct: 73  LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           K C  + +   G+ IH   I  G   DLF  T +++MY KC  + +A  +F  MP RDLV
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192

Query: 206 SWNTIVAGFAQNGFAELALD--LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +WN ++AG+A +G    A+   L  +M     R +  T+V++LP +A  G+L  G +VH 
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252

Query: 264 YAMRAGFDSIVN----------VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           Y +RA      N          + TAL+DMYAKCG +  AR VFD M +RN V+W+++I 
Sbjct: 253 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312

Query: 314 AYVEGGNPEEAMRIFQKMLDQGV---EPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
            +V      +A  +F+ ML QG+    PT  +I  AL ACA L  L  G  +H LL +  
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +  D++  NSL+SMY+K   +D+A  +F ++  K  VS++A++ GY QNGR  EA   F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           KM++ N++PD+ TMVS+IPA + L+ +++ +  H  VI         +  ALIDMYAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            +  +R +F+MM  R + +WN MI GYG HGLGK A  LF +M      P+ +TF+C +S
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSHSGLV EG H+F  +   YG+ P M+HY  MVDLL R G L+EA++FIQ MP+   +
Sbjct: 551 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V+ A+LGAC+++KN++LG+K +  + EL P+  G  VLL+NIY+AA  +D+ A+VR I 
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
           + +G +K+PGCS +E+   +H+F  G   HPQS  IY  L+ ++  IK  GY PDT+ + 
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVL 730

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            D+E+  +E  L  HSEKLAIA+G+L+ S   TI + KNLRVCGDCH   K+ISLV  R 
Sbjct: 731 QDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRA 790

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           IIVRD +RFH FKNG CSCGD+W
Sbjct: 791 IIVRDANRFHHFKNGQCSCGDFW 813



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/567 (26%), Positives = 265/567 (46%), Gaps = 34/567 (5%)

Query: 9   LSVFTNSTPTQT---LHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPL 62
           +  +++S+PT     LH ++  L  R  +    Y  P AL  + C++L +    R I   
Sbjct: 95  IRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFPFAL--KACSALADHHCGRAIHRH 150

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            I +GL       T L+ ++ K   L DAA +F  +P +    ++ ML GYA       A
Sbjct: 151 AIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHA 210

Query: 123 VSFLI--RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI----------VNGFS 170
           V+ L+  +M+   + P       LL +    G + +G  +H   I           +  +
Sbjct: 211 VAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLT 270

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +   T +++MYAKCG +  A ++FD MP R+ V+W+ ++ GF        A  L   M
Sbjct: 271 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 330

Query: 231 HEEGRRGDFI---TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             +G    F+   +I S L A A++  LR+G+ +H    ++G  + +    +L+ MYAK 
Sbjct: 331 LAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 388

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G ++ A  +FD M  ++ VS++++++ YV+ G  EEA  +F+KM    VEP   T++  +
Sbjct: 389 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            AC+ L  L+ G   H  +    L ++ S+ N+LI MY+KC ++D +  +F+ +  + +V
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV 508

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS-VIRYAKWIHAL 466
           SWN MI GY  +G   EA   F +M +    PD  T + ++ A +    VI    W H +
Sbjct: 509 SWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 568

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDG---YGTHGL 522
                    +     ++D+ ++ G +  A      M  R  V  W  ++     Y    L
Sbjct: 569 GHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDL 628

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAI 549
           GK    +  ++  GP    +   L  I
Sbjct: 629 GKKVSRMIQEL--GPEGTGNFVLLSNI 653



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 153/315 (48%), Gaps = 14/315 (4%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C SL  LR   ++  L+ KSG+         L+S++ K   +  A  +F+ +  K  
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 406

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  ++ GY +    ++A     +M+  +V P       L+  C  +  ++ G+  HG 
Sbjct: 407 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 466

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G + +      +++MYAKCG+I+ + ++F+ MP RD+VSWNT++AG+  +G  + A
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV-----HGYAMRAGFDSIVNVST 278
             L   M+  G   D +T + +L A ++ G +  GK       HGY +    +  +    
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI---- 582

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +VD+ ++ G ++ A      M  R +V  W +++ A     N +   ++ + + + G E
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642

Query: 338 PT-NVTIMEALHACA 351
            T N  ++  +++ A
Sbjct: 643 GTGNFVLLSNIYSAA 657


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 310/755 (41%), Positives = 467/755 (61%), Gaps = 8/755 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L++ +G        T+LV+L+     +S +   F+ IP K    +++M+  Y       +
Sbjct: 141 LLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHE 200

Query: 122 AVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           A+  F   +   ++ P  Y +  +LK CG + +   G+ IH      GF  ++F    ++
Sbjct: 201 AIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLI 257

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY++ G    A  +FD MP RD+ SWN +++G  QNG A  ALD++  M  EG + +F+
Sbjct: 258 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 317

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+VSILP    +G +     +H Y ++ G +  + VS AL++MYAK G +E AR  F  M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +VVSWNS+IAAY +  +P  A   F KM   G +P  +T++      A   D +   
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437

Query: 361 FVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            VH  ++ +  L  DV + N+++ MY+K   +D A  +F  +  K ++SWN +I GYAQN
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQN 497

Query: 420 GRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           G  +EA+  +  M   K I P+  T VS++PA A +  ++    IH  VI++    +VFV
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFV 557

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            T LID+Y KCG +  A +LF  + +    TWN +I  +G HG  +  ++LF +ML+   
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 617

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           KP+ +TF+  +SACSHSG VEEG   F  L ++YGI+P + HYG MVDLLGRAG L  A+
Sbjct: 618 KPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            FI+ MP++P  +++GA+LGAC+IH N+ELG+ A++RLFE+D    GY+VLL+NIYA   
Sbjct: 677 GFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 736

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W+ + KVR++  ++GL+KTPG S +E+  +V  FY+G+  HP+ K IY  L  L  ++K
Sbjct: 737 KWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 796

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
           + GY+PD + +  DVE+  +E++L+SHSE+LAIAFG++++ P S I I KNLRVCGDCHN
Sbjct: 797 SLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHN 856

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ATK+IS +T REI+VRD +RFH FK+G+CSCGDYW
Sbjct: 857 ATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 271/512 (52%), Gaps = 24/512 (4%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            K +H  L+V G    +F  T +VN+YA  G +  +   FD++P++D+ +WN++++ +  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 217 NGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           NG    A+    ++      R DF T   +L A    G+L  G+ +H +A + GF   V 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRRIHCWAFKLGFQWNVF 251

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V+ +L+ MY++ G    AR +FD M  R++ SWN+MI+  ++ GN  +A+ +  +M  +G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++   VT++  L  C  LGD+   + +H  + +  L  D+ ++N+LI+MY+K   ++ A 
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
             F ++    +VSWN++I  Y QN     A  +F KM+    +PD  T+VS+   +A+  
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 456 VIRYAKWIHALVI-RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             + ++ +H  ++ R    ++V +  A++DMYAK G + +A  +F+++  + V +WN +I
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491

Query: 515 DGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYF-----TSL 568
            GY  +GL   A+E++  M E     PN  T++  + A +H G +++G+        T+L
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
             D  +         ++D+ G+ GRL +A     ++P E  +T + A++    IH + E 
Sbjct: 552 HLDVFVAT------CLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEK 604

Query: 629 GEKAANRLFE--LDPDEGGYHVLLANIYAAAS 658
             K    + +  + PD    HV   ++ +A S
Sbjct: 605 TLKLFGEMLDEGVKPD----HVTFVSLLSACS 632



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 269/538 (50%), Gaps = 15/538 (2%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L+ C +L + RRI     K G          L+ ++ ++     A  +F+ +P +    
Sbjct: 224 VLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ M+ G  +  +   A+  L  MR + +         +L VC  +G+I     IH  +I
Sbjct: 284 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            +G   DLF    ++NMYAK G +E+A K F +M   D+VSWN+I+A + QN     A  
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDM 283
              +M   G + D +T+VS+   VA     +  ++VHG+ MR G+  + +V +  A+VDM
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV-IGNAVVDM 462

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNV 341
           YAK G +++A  VF+ +  ++V+SWN++I  Y + G   EA+ ++ KM+++  E  P   
Sbjct: 463 YAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQG 521

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T +  L A A +G L++G+ +H  + +  L  DV +   LI +Y KC ++  A  +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             ++ V+WNA+I  +  +G   + L  F +M  + +KPD  T VS++ A +    +   K
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH 520
           W   L+     + ++     ++D+  + G +  A     DM  +   + W  ++     H
Sbjct: 642 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIH 701

Query: 521 G---LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G   LGK A +   ++ E  +K  ++ +   +S    +    EG+    SL ++ G++
Sbjct: 702 GNIELGKFASD---RLFEVDSK--NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 754



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +AK +HAL++ +   +++F+ T L+++YA  G V  +R  FD + ++ V TWN MI  Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 519 THGLGKAAVELFNK-MLEGPTKPNDITFLCAISAC 552
            +G    A+  F + +L    +P+  TF   + AC
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 228


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 307/784 (39%), Positives = 471/784 (60%), Gaps = 8/784 (1%)

Query: 33  YIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           +I SR Y      L + CT L++    +++   II+ G          L+ L+    +++
Sbjct: 54  HIDSRTY----VKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           +A ++F+ + +K    ++ ++ GYA+   + +A +   +M  + + P +  +  +L  C 
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
               +  GKE+H Q++  GF  D    T +V+MY K G +++A ++FD +  RD+ ++N 
Sbjct: 170 SPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNV 229

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V G+A++G  E A +L  RM + G + + I+ +SIL       +L  GKAVH   M AG
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
               + V+T+L+ MY  CG +E AR VFD MK R+VVSW  MI  Y E GN E+A  +F 
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            M ++G++P  +T M  ++ACA   +L     +H  +D    GTD+ ++ +L+ MY+KC 
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCG 409

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +  A  +F  +  + +VSW+AMI  Y +NG   EA   F  M+  NI+PD  T ++++ 
Sbjct: 410 AIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLN 469

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A   L  +     I+   I++    +V +  ALI M AK G+V  AR +FD M  R V T
Sbjct: 470 ACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVIT 529

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN MI GY  HG  + A+ LF++ML+   +PN +TF+  +SACS +G V+EG  +FT L 
Sbjct: 530 WNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLL 589

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           +  GI P +  YG MVDLLGRAG L+EA   I+ MP++P  +++ ++L AC+IH N+++ 
Sbjct: 590 EGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           E+AA R   +DP +G  +V L+++YAAA MW+ +AKVR +ME +G++K  GC+ +E+  +
Sbjct: 650 ERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGK 709

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKL 748
           VH+F      HP    IY  L  L++ IK  GY+P T N +HDV +  +E  +S HSEKL
Sbjct: 710 VHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKL 769

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           AIA+G+L+   G+ I I KNLRVC DCH+A+K+IS VTGREII RD  RFH FK+GVCSC
Sbjct: 770 AIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSC 829

Query: 809 GDYW 812
           GDYW
Sbjct: 830 GDYW 833



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 208/398 (52%), Gaps = 4/398 (1%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A D++ R+ E G   D  T V +      +    +GK V  + ++ G    +     L+ 
Sbjct: 41  ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +Y+ CG V  AR +FD ++++ VV+WN++IA Y + G+ +EA  +F++M+D+G+EP+ +T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+    L  G  VH  +      +D  +  +L+SMY K   +D A  +F  L 
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + + ++N M+ GYA++G   +A   F +M+   +KP+  + +S++        + + K 
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA  + +    ++ V T+LI MY  CG++  AR +FD M  R V +W VMI+GY  +G 
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGN 340

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK-KDYGIEPVMDHY 581
            + A  LF  M E   +P+ IT++  ++AC+ S  +       + +    +G + ++   
Sbjct: 341 IEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST- 399

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            A+V +  + G + +A      MP    +  + AM+GA
Sbjct: 400 -ALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAMIGA 435


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 316/797 (39%), Positives = 479/797 (60%), Gaps = 29/797 (3%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQT-----------------KLVSLFCKY 85
           + L LE CT L E       + +  L  QHL +                  KLV L+   
Sbjct: 5   TRLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIAC 64

Query: 86  NSLSDAARVFEPIPDKLD--ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           + L  A  VF+ +P +     L++ +++ YA     ++A+    +M    + P  + + +
Sbjct: 65  SELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPF 124

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +LK C  + E   G+EIH  +       +++  T +V+ YAKCG +++A ++FD+M +RD
Sbjct: 125 VLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRD 184

Query: 204 LVSWNTIVAGFA--QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +V+WN++++GF+  +  + E+A  LV   ++        TIV +LPAVA V SLR GK +
Sbjct: 185 VVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSS--TIVGVLPAVAQVNSLRHGKEI 242

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGN 320
           HG+ +R GF   V V T ++D+Y KC  ++ AR +FD M   +N V+W++M+ AYV    
Sbjct: 243 HGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDF 302

Query: 321 PEEAMRIFQKML---DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             EA+ +F ++L   D  +  + VT+   +  CA+L DL  G  +H    +     D+ +
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+SMY+KC  ++ A   F+++  +  VS+ A+I GY QNG   E L  F +M+   I
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+  T+ SV+PA A L+ + Y    H   I   F  +  +  ALIDMYAKCG + TAR 
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD M++R + +WN MI  YG HG+G  A+ LF+ M     KP+D+TF+C ISACSHSGL
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V EG ++F ++ +D+GI P M+HY  MVDLL RAG   E   FI+KMP+EP + V+GA+L
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC+++KNVELGE  + ++ +L P+  G  VLL+N+Y+A   WD  A+VR   +++G +K
Sbjct: 603 SACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEK 662

Query: 678 TPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           +PGCS +E+   VH+F  G  + HPQ  +I   L+ L+ E+K  GY  +++ +  DVE+ 
Sbjct: 663 SPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEE 722

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E +L  HSEKLAIAFG+L+ SP   I + KNLRVCGDCH A K+ISLVT R+I VRD 
Sbjct: 723 EKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDA 782

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK+G+C+CGD+W
Sbjct: 783 SRFHHFKDGICNCGDFW 799


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 303/771 (39%), Positives = 463/771 (60%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C   K+L   +++   I++ G+         L+ L+    S+++A R+F+   +K 
Sbjct: 50  LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ M+ GYA      +A +    M+ + + P  + +  +L  C     +  G+E+H 
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++  G + +      +++MYAKCG + +A ++FD M  RD VSW T+   +A++G+A+ 
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +L     M +EG R   IT +++L A  ++ +L  GK +H   + +   S V VSTAL  
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG V+ AR VF+ + +R+V++WN+MI   V+ G  EEA  +F +ML + V P  VT
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L ACA  G L  G  +H    +  L +DV   N+LI+MYSK   +  A  +F ++ 
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSW A++ GYA  G+V E+ + F KM  + ++ +  T + V+ A +    +++ K 
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKE 469

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA V+++    ++ V  AL+ MY KCG+V  A  + + M+ R V TWN +I G   +G 
Sbjct: 470 IHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGR 529

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++ F  M     +PN  TF+  +SAC    LVEEG   F S++KDYGI P   HY 
Sbjct: 530 GLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYA 589

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVD+L RAG L EA D I  MP +P   ++GA+L AC+ H NVE+GE+AA +  +L+P 
Sbjct: 590 CMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ 649

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G +V L+ IYAAA MW  +AK+R +M+++G++K PG S +E+  EVHSF +G   HP+
Sbjct: 650 NAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPR 709

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ IY+ LE L  +IK+ GYVPDT  + HD++   +E  +  HSEKLAIA+GL+++ P +
Sbjct: 710 TEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPET 769

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I + KNLRVC DCH ATK+IS +TGREII RD HRFH FKNG CSCGDYW
Sbjct: 770 PIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 197/381 (51%), Gaps = 1/381 (0%)

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D++  +H++G + D    V +L +      L +GK VH + +R G    V +   L+ +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
             CG V  AR +FD   +++VVSWN MI+ Y   G  +EA  +F  M  +G+EP   T +
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L AC+    L  G  VH  + +  L  + ++ N+LISMY+KC  V  A  +F  +  +
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
             VSW  +   YA++G   E+L  +  M  + ++P   T ++V+ A   L+ +   K IH
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A ++ S    +V V TAL  MY KCGAV  AR +F+ +  R V  WN MI G    G  +
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A  +F++ML+    P+ +T+L  +SAC+  G +  G        KD G+   +    A+
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNAL 388

Query: 585 VDLLGRAGRLNEAWDFIQKMP 605
           +++  +AG + +A     +MP
Sbjct: 389 INMYSKAGSMKDARQVFDRMP 409


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 303/786 (38%), Positives = 470/786 (59%), Gaps = 41/786 (5%)

Query: 42  PSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD---AARVF 95
           P + L++ C      +R   I   +I +G        TK++ L+ +   L D   A ++F
Sbjct: 73  PYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLF 132

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           E +P++    ++TM+  YA+     +A     RM    V P  + +   L+VCG +    
Sbjct: 133 EEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 192

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GK++H +LI  GF  D F    +++MYAKC   E   K+FD M ER+ V+WN+I++  A
Sbjct: 193 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 252

Query: 216 QNGFAELALDLVTRMHE--EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           Q G    AL L  RM E  +G + D  T  ++L   AN  +   G+ +H + +RA     
Sbjct: 253 QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V T LV MY++CGR+  A+ +F+ M  RN  SWNSMI  Y + G  +EA+R+F++M  
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQL 372

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G++P   ++   L +C  L D ++G  +H  + +  +  +  +   L+ MY+KC  +D 
Sbjct: 373 NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDY 432

Query: 394 AADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           A  ++ +   + +    WN+++ GYA  G   E+ N+F +M   +I+ D  TMV+++   
Sbjct: 433 AWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV--- 489

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVM-TALIDMYAKCGAVGTARALFDMMNERHVTTW 510
                                  N+ V+ TAL+DMY+KCGA+  AR +FD MN +++ +W
Sbjct: 490 -----------------------NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 526

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI GY  HG  K A+ L+ +M +    PN++TFL  +SACSH+GLVEEG+  FTS+++
Sbjct: 527 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 586

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           DY IE   +HY  MVDLLGRAGRL +A +F++KMPIEP ++ +GA+LGAC++HK++++G 
Sbjct: 587 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 646

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA RLFELDP   G +V+++NIYAAA  W ++  +R +M+ KG++K PG S +E+ +E+
Sbjct: 647 LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEI 706

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSE 746
             F++GS  HP+++ IY  L  L  + K  GY+PDT+    ++ D+++  +E  L  HSE
Sbjct: 707 QIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSE 766

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           +LA++ GL++    STI + KNLR+CGDCH ATK+IS +TGR II RD +RFH F+NG C
Sbjct: 767 RLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKC 826

Query: 807 SCGDYW 812
           SCGDYW
Sbjct: 827 SCGDYW 832


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 317/777 (40%), Positives = 466/777 (59%), Gaps = 7/777 (0%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           P   L    T+   LRR     I   + D   +Q +L     +   L+ A +VF+ IP  
Sbjct: 4   PRGHLRPFSTAAVRLRRPPSGSISHEVKDNKEWQQELEQHIAR-GQLALARQVFDRIPAP 62

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               Y+ +++ Y+       A+     M Y  V P  Y + ++LK C  + ++  G+ IH
Sbjct: 63  DARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIH 122

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
                 G   DLF  T ++++Y +C +   A  +F +MP RD+V+WN ++AG+A +G   
Sbjct: 123 AHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYH 182

Query: 222 LALDLVTRMHEEG-RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS---IVNVS 277
            A+  +  M + G  R +  T+VS+LP +A  G+L  G +VH Y +RA  D     V + 
Sbjct: 183 HAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIG 242

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           TAL+DMYAKC  +  A  VF GM  RN V+W+++I  +V      EA  +F+ ML +G+ 
Sbjct: 243 TALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302

Query: 338 PTNVT-IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
             + T +  AL  CA L DL  G  +H LL +  +  D++  NSL+SMY+K   ++ A  
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++  K  +S+ A++ GY QNG+  EA   F KM++ N++PD  TMVS+IPA + L+ 
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +++ +  H  VI         +  +LIDMYAKCG +  +R +FD M  R + +WN MI G
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           YG HGLGK A  LF  M     +P+D+TF+C I+ACSHSGLV EG H+F ++   YGI P
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 542

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            M+HY  MVDLL R G L+EA+ FIQ MP++  + V+GA+LGAC+IHKN++LG++ +  +
Sbjct: 543 RMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMI 602

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            +L P+  G  VLL+NI++AA  +D+ A+VR I + KG +K+PGCS +E+   +H+F  G
Sbjct: 603 QKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGG 662

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HP S  IY  L+ ++ +IK  GY  DT+ +  D+E+  +E  L  HSEKLAIAFG+L
Sbjct: 663 DQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVL 722

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +   TI + KNLRVCGDCH A KY++LV  R IIVRD +RFH FKNG CSCGD+W
Sbjct: 723 SLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 327/824 (39%), Positives = 485/824 (58%), Gaps = 57/824 (6%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++ L   C SL         ++  GL       T ++S++  +NS + A  V   +    
Sbjct: 51  TSTLFHQCKSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSS 107

Query: 103 DALY--HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
             ++  + +++       L+D +    RM+     P  Y + ++LK CG++   R G  +
Sbjct: 108 HTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASV 167

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQN 217
           H  +  +GF  ++F   G+V+MY +CG  E A ++FD M ER   DLVSWN+IVA + Q 
Sbjct: 168 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 227

Query: 218 GFAELALDLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           G +  A+ +  RM E+ G R D +++V++LPA A+VG+   GK VHGYA+R+G    V V
Sbjct: 228 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFV 287

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM------------------------- 311
             A+VDMYAKCG +E A  VF+ MK ++VVSWN+M                         
Sbjct: 288 GNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKI 347

Query: 312 ----------IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
                     IA Y + G   EA+ +F++ML  G EP  VT++  L  CA  G L  G  
Sbjct: 348 ELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKE 407

Query: 362 VH-------KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAM 412
            H         LD+   G D+ + N+LI MYSKCK    A  +F  +  + +++V+W  +
Sbjct: 408 THCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVL 467

Query: 413 ILGYAQNGRVNEALNYFCKMRSKN--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           I G AQ+G  NEAL  F +M   +  + P++FT+   + A A L  +R+ + IHA V+R+
Sbjct: 468 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 527

Query: 471 CFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
            FE   +FV   LIDMY+K G V  AR +FD M++R+  +W  ++ GYG HG G+ A+++
Sbjct: 528 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 587

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F +M +    P+ +TF+  + ACSHSG+V++GI+YF  + KD+G+ P  +HY  MVDLL 
Sbjct: 588 FYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 647

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAGRL+EA + I+ MP++P   V+ A+L AC+++ NVELGE AAN+L EL+    G + L
Sbjct: 648 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTL 707

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYA A  W  +A++R +M+  G++K PGCS V+ +    +F++G   HP S++IY  
Sbjct: 708 LSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDL 767

Query: 710 LETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L  L+  IKA GYVPD   ++HDV+D  + +LLS HSEKLA+A+G+L ++PG+ I I KN
Sbjct: 768 LRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKN 827

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR CGDCH+A  YIS++   EIIVRD  RFH FKNG CSC  YW
Sbjct: 828 LRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 312/733 (42%), Positives = 453/733 (61%), Gaps = 11/733 (1%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           LS A  +F+ IP      Y+ +++ Y+          +    R     P  Y + ++LK 
Sbjct: 79  LSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKA 138

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C  + ++R  + +H      G   DLF  T +V++YAKC     A  +F RMP RD+V+W
Sbjct: 139 CSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAW 198

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++AG+A +G     +  +  M ++    +  T+V++LP +A  G+L  G+AVH Y++R
Sbjct: 199 NAMLAGYALHGKYSDTIACLLLMQDD-HAPNASTLVALLPLLAQHGALSQGRAVHAYSVR 257

Query: 268 A----GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           A         V V TAL+DMYAKCG +  A  VF+ M  RN V+W++++  +V  G   E
Sbjct: 258 ACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLE 317

Query: 324 AMRIFQKMLDQGV---EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           A  +F+ ML QG+    PT+V    AL ACA+L DL  G  +H LL +  L TD++  NS
Sbjct: 318 AFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNS 375

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+SMY+K   +D+A  +F ++  K  VS++A++ GY QNG+ +EA   F KM++ N++PD
Sbjct: 376 LLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPD 435

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             TMVS+IPA + L+ +++ K  H  VI         +  ALIDMYAKCG +  +R +FD
Sbjct: 436 VATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           +M  R + +WN MI GYG HGLGK A  LF  M     +P+D+TF+C ISACSHSGLV E
Sbjct: 496 VMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  +F  +   YGI P M+HY  MVDLL R G L+EA+ FIQ MP++  + V+GA+LGAC
Sbjct: 556 GKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HKN++LG++ ++ + +L P+  G  VLL+NI++AA  +D+ A+VR I +++G +K+PG
Sbjct: 616 RVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPG 675

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
           CS +E+   +H+F  G   H QS  IY  L+ ++ +I   GY  DT+ +  DVE+  +E 
Sbjct: 676 CSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEK 735

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L  HSEKLAIAFG+L  S   TI + KNLRVCGDCH   KY++LV  R IIVRD +RFH
Sbjct: 736 ALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFH 795

Query: 800 CFKNGVCSCGDYW 812
            FKNG CSCGD+W
Sbjct: 796 HFKNGQCSCGDFW 808



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 227/478 (47%), Gaps = 20/478 (4%)

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG +  A  +FD++P   +  +N ++  ++  G A       +       + +  T   +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A + +  LR  +AVH +A RAG  + + VSTALVD+YAKC     A  VF  M +R+V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V+WN+M+A Y   G   + +     M D    P   T++  L   A  G L +G  VH  
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 366 ------LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
                 L   K G  V +  +L+ MY+KC  +  A+ +F  +  +  V+W+A++ G+   
Sbjct: 255 SVRACSLHDHKDG--VLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMV-SVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           GR+ EA + F  M ++ +   S T V S + A A LS +   K +HAL+ +S    ++  
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             +L+ MYAK G +  A  LFD M  +   +++ ++ GY  +G    A  +F KM     
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P+  T +  I ACSH   ++ G     S+    GI        A++D+  + GR++ + 
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGRIDLSR 491

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL-----DPDEGGYHVLLA 651
                MP    I  +  M+    IH    LG++A     ++     +PD+  +  L++
Sbjct: 492 QIFDVMPAR-DIVSWNTMIAGYGIHG---LGKEATALFLDMKHQACEPDDVTFICLIS 545



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 5/273 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C +L +L   +++  L+ KSGL         L+S++ K   +  A  +F+ +  K  
Sbjct: 342 LRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDT 401

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  ++ GY +    D+A     +M+  +V P V     L+  C  +  ++ GK  HG 
Sbjct: 402 VSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGS 461

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +IV G + +      +++MYAKCG+I+ + ++FD MP RD+VSWNT++AG+  +G  + A
Sbjct: 462 VIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEA 521

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVD 282
             L   M  +    D +T + ++ A ++ G +  GK   H  A + G    +     +VD
Sbjct: 522 TALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVD 581

Query: 283 MYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
           + A+ G ++ A     GM  + +V  W +++ A
Sbjct: 582 LLARGGFLDEAYQFIQGMPLKADVRVWGALLGA 614


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/803 (38%), Positives = 466/803 (58%), Gaps = 6/803 (0%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQ 71
           F  + P  T +  K    Q   +P+ I+   S LL E   +L  ++     II + L   
Sbjct: 7   FIANKPFSTCNPLKD--GQFNQLPTIIHNFLS-LLRESSKNLIWVKSTHAQIITNSLSTD 63

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
               TKLV  +    SL  A  VF+        L + ML GY +     + +     MR 
Sbjct: 64  QFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRS 123

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
            ++     + T+ LK C    +   G EI    +  G   + F  + +++   K G+I E
Sbjct: 124 RNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGE 183

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A ++FD MP +D+V WN+I+ G+ Q G  ++A  L   MH  G +   IT+ S++ A   
Sbjct: 184 AQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGG 243

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +G+L++GK +HGY +  G  + + V T+ VDMY+K G +E+AR VF  M +RN+VSWN+M
Sbjct: 244 IGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAM 303

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I+  V  G   E+  +F +++         TI+  L  C+    L  G  +H    +   
Sbjct: 304 ISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SF 362

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            +++ ++ +++ +YSKC  + +A  +F++++ + +++W AM++G AQNG   +AL  F +
Sbjct: 363 ESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQ 422

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M+ + I  +S T VS++ + A L  ++  + IH  + R  F  ++  MTAL+DMYAKCG 
Sbjct: 423 MQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGK 482

Query: 492 VGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           +  A  +F   +  + V  WN MI GYG HG G  AV +++KM+E   KPN  TFL  +S
Sbjct: 483 INLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLS 542

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSHS LVE+GI  F S+++D+ I P+  HY  +VDLL RAGR  EA   I+KMP +PG 
Sbjct: 543 ACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGT 602

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V  A+L  C+ HKN+ LG + +++L  LD    G +++L+NIYA A  WDK+  +R +M
Sbjct: 603 AVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLM 662

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
             +GL+KTPG SLVE  N VH+F++G   HP  + IY FLE+L   ++ +GYVPDT+ + 
Sbjct: 663 RNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVL 722

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            DV++ ++  +L  HSE+LAIAFGLL +  GS I I KNLRVCGDCH  TKYIS +  RE
Sbjct: 723 RDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKRE 782

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           IIVRD +RFH F NG CSCGDYW
Sbjct: 783 IIVRDANRFHHFSNGECSCGDYW 805


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 302/806 (37%), Positives = 467/806 (57%), Gaps = 39/806 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+ L++L+    I   +++ G+ +     +  V+ + K   + +A  VF+ +P + 
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRD 206

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++++   Y         ++    M  D V P     + +L  C D+ +++ GK IHG
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             + +G   ++F    +VN+Y  C  + EA  +FD MP R++++WN++ + +   GF + 
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L++   M   G + D + + SILPA + +  L+ GK +HG+A++ G    V V TALV+
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVN 386

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YA C  V  A+ VFD M  RNVV+WNS+ + YV  G P++ + +F++M+  GV+P  VT
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  LHAC+DL DL+ G  +H    +  +  DV + N+L+S+Y+KC  V  A  +F  + 
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506

Query: 403 GKTLVSWNAMILGY-----------------------------------AQNGRVNEALN 427
            + + SWN ++  Y                                    +N R+ EA+ 
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F KM++   KPD  T+ S++ A +    +R  K IH  V R   + ++    AL+DMYA
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG +  +R +FDMM  + V +WN MI   G HG GK A+ LF KML    KP+  TF C
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTC 686

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSHS LVEEG+  F S+ +D+ +EP  +HY  +VD+  RAG L EA+ FIQ+MP+E
Sbjct: 687 VLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P    + A L  C+++KNVEL + +A +LFE+DP+    +V L NI   A +W + +K+R
Sbjct: 747 PTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIR 806

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
            +M+++G+ KTPGCS   + N VH+F +G   + +S +IY FL+ L  +IKAAGY PDT+
Sbjct: 807 KLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTD 866

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HD++   +   L +HSEKLA+AFG+LN +  STI + KNLR+CGDCHNA KY+S V 
Sbjct: 867 YVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVV 926

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           G  I+VRD  RFH FKNG CSC D+W
Sbjct: 927 GVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 307/609 (50%), Gaps = 47/609 (7%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K   +  A RVF+ +  +    ++++   Y         ++   +M  + V       + 
Sbjct: 87  KCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSS 146

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L  C D+ +++ GKEIHG ++ +G   D+F  +  VN YAKC  + EA  +FD MP RD
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRD 206

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +V+WN++ + +   GF +  L++   M  +G + D +T+  IL A +++  L+ GKA+HG
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           +A++ G    V VS ALV++Y  C  V  A+ VFD M  RNV++WNS+ + YV  G P++
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
            + +F++M   GV+P  + +   L AC+ L DL+ G  +H    +  +  DV +  +L++
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVN 386

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           +Y+ C  V  A  +F  +  + +V+WN++   Y   G   + LN F +M    +KPD  T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           M+S++ A ++L  ++  K IH   +R    ++VFV  AL+ +YAKC  V  A+ +FD++ 
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            R V +WN ++  Y T+   +  + +F++M     K ++IT+   I  C  +  +EE + 
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566

Query: 564 YFTSLKKDYGIEP---------------------------VMDHY--------GAMVDLL 588
            F  ++   G +P                           V  H+         A+VD+ 
Sbjct: 567 IFRKMQT-MGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMY 625

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE------LDPD 642
            + G L+ + +    MPI+  +  +  M+ A  +H N     K A  LFE      + PD
Sbjct: 626 AKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN----GKEALSLFEKMLLSMVKPD 680

Query: 643 EGGYHVLLA 651
              +  +L+
Sbjct: 681 SATFTCVLS 689



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 243/448 (54%), Gaps = 2/448 (0%)

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           ++A+      R   + P    +  + K C    +  + K+ H      G   D+      
Sbjct: 22  NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           ++ Y KC  +E A ++FD +  RD+V+WN++ A +   GF +  L++  +M     + + 
Sbjct: 82  IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T+ SILP  +++  L+ GK +HG+ +R G    V VS+A V+ YAKC  V  A+ VFD 
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  R+VV+WNS+ + YV  G P++ + +F++M+  GV+P  VT+   L AC+DL DL+ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H    +  +  +V ++N+L+++Y  C  V  A  +F  +  + +++WN++   Y   
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   + LN F +M    +KPD   M S++PA ++L  ++  K IH   ++    ++VFV 
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TAL+++YA C  V  A+ +FD+M  R+V TWN +   Y   G  +  + +F +M+    K
Sbjct: 382 TALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVK 441

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYF 565
           P+ +T L  + ACS    ++ G  IH F
Sbjct: 442 PDLVTMLSILHACSDLQDLKSGKVIHGF 469



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 5/391 (1%)

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +G    A+ + T     G + D    +++  A A        K  H  A R G  S V++
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             A +  Y KC  VE AR VFD + +R+VV+WNS+ A YV  G P++ + +F+KM    V
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +   +T+   L  C+DL DL+ G  +H  + +  +  DV ++++ ++ Y+KC  V  A  
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +  + +V+WN++   Y   G   + LN F +M    +KPD  T+  ++ A ++L  
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           ++  K IH   ++    +NVFV  AL+++Y  C  V  A+A+FD+M  R+V TWN +   
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGI 574
           Y   G  +  + +F +M     KP+ +     + ACS    ++ G  IH F      +G+
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV---KHGM 374

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
              +    A+V+L      + EA      MP
Sbjct: 375 VEDVFVCTALVNLYANCLCVREAQTVFDLMP 405


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 301/807 (37%), Positives = 457/807 (56%), Gaps = 40/807 (4%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++E C  L+     + +   + + GL         L++ + K+  ++   +VF  +  + 
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+  YA       A     RM+  ++ P    +  +LK C +   + + +EIH 
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  +G   D+   T ++ MY+KCG+I  A ++F +M ER++VSW  I+   AQ+     
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A +L  +M + G   + +T VS+L +     +L  G+ +H +    G ++ V V+ AL+ 
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVE 337
           MY KC  ++ AR  FD M  R+V+SW++MIA Y + G     + +E  ++ ++M  +GV 
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VT M  L AC+  G LE+G  +H  + ++   +D S+  ++ +MY+KC  +  A  +
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443

Query: 398 FSKLQGKTLV-------------------------------SWNAMILGYAQNGRVNEAL 426
           FSK++ K +V                               SWN MI GYAQ+G + +  
Sbjct: 444 FSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVF 503

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
                M+ +  +PD  T++S++ A   LS +   K +HA  ++   E +  V T+LI MY
Sbjct: 504 ELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMY 563

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           +KCG V  AR +FD ++ R    WN M+ GYG HG+G  AV+LF +ML+    PN+ITF 
Sbjct: 564 SKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFT 623

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             ISAC  +GLV+EG   F  +++D+ ++P   HYG MVDLLGRAGRL EA +FIQ+MP 
Sbjct: 624 AVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPC 683

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP I+V+ A+LGACK H NV+L E AA+ +  L+P     +V L+NIYA A  WD   KV
Sbjct: 684 EPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKV 743

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R +M+ KGL+K  G S +E+   +H+F +    HP+   I+  LE L  E+K AGY PD 
Sbjct: 744 RKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDM 803

Query: 727 NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
             + HDV++  +E  L  HSEKLAIA+GLL + PG+ I I KNLRVCGDCH ATK+IS +
Sbjct: 804 RFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKI 863

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
             REI+ RD +RFH FKNG CSCGD+W
Sbjct: 864 RKREIVARDANRFHYFKNGTCSCGDFW 890


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/814 (39%), Positives = 468/814 (57%), Gaps = 61/814 (7%)

Query: 60  LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
           LP +            T +V+ +    +   A  V E +       ++ +++ + K   L
Sbjct: 39  LPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRL 98

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           D A++   RM         +   ++LK CG++   R G   HG +  NGF  ++F    +
Sbjct: 99  DSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNAL 158

Query: 180 VNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQNGFAELALDLVTRM----HE 232
           V MY++CG +EEA  +FD + +R   D++SWN+IV+   ++  A  ALDL ++M    HE
Sbjct: 159 VAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE 218

Query: 233 E--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           +    R D I+IV+ILPA  ++ ++   K VHG A+R G    V V  AL+D YAKCG +
Sbjct: 219 KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLM 278

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGN------------------------------ 320
           E A  VF+ M+ ++VVSWN+M+A Y + GN                              
Sbjct: 279 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGY 338

Query: 321 -----PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL--------LD 367
                  EA+ +F++M+  G  P  VTI+  L ACA LG   +G+ +H          LD
Sbjct: 339 SQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLD 398

Query: 368 QLKLGTDVSMT--NSLISMYSKCKKVDRAADIFS--KLQGKTLVSWNAMILGYAQNGRVN 423
               G D  +   N+LI MYSKC+    A  IF    L+ + +V+W  MI G+AQ G  N
Sbjct: 399 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 458

Query: 424 EALNYFCKMRSK--NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR--SCFEKNVFVM 479
           +AL  F +M S+   + P+++T+  ++ A A L+ IR  K IHA V+R         FV 
Sbjct: 459 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA 518

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             LI+MY+KCG V TAR +FD M+++   +W  M+ GYG HG G  A+++F+KM +    
Sbjct: 519 NCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 578

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+DITFL  + ACSH G+V++G+ YF S+  DYG+ P  +HY   +DLL R GRL++AW 
Sbjct: 579 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWK 638

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            ++ MP+EP   V+ A+L AC++H NVEL E A N+L E++ +  G + L++NIYA A  
Sbjct: 639 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 698

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  +A++R +M+K G++K PGCS V+ +    SF+ G   HP S +IY  LE+LID IKA
Sbjct: 699 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 758

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYVP+TN ++HDV++  + NLL  HSEKLA+A+GLL + PG  I I KNLRVCGDCH+A
Sbjct: 759 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSA 818

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             YIS +   EI+VRD  RFH FKNG CSCG YW
Sbjct: 819 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/774 (38%), Positives = 462/774 (59%), Gaps = 4/774 (0%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           S LL+      +++R   P      + D     T+L       N +  A  VF+ IP   
Sbjct: 12  SILLINWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPS 71

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ M++ YA       ++   + M    V P  + + +LLK C  +  ++ G+ IH 
Sbjct: 72  VVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHT 131

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFA 220
              + G S+DL+  T +++MYAKCG + +A  +F+ +   +RD+V+WN ++A F+ +   
Sbjct: 132 HAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALH 191

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
              +  V +M + G   +  T+VSILP +    +L  GKA+H Y +R  F   V + TAL
Sbjct: 192 AQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTAL 251

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPT 339
           +DMYAKC  +  AR +F+ +  +N V W++MI  YV   +  +A+ ++  ML   G+ PT
Sbjct: 252 LDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPT 311

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T+   L ACA L DL+RG  +H  + +  +  D ++ NSLISMY+KC  +D A     
Sbjct: 312 PATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD 371

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           ++  K  VS++A+I G  QNG   +AL  F +M+S  I P   TM++++PA + L+ +++
Sbjct: 372 EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQH 431

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
               H   +   F  +  +  A+IDMY+KCG +  +R +FD M  R + +WN MI GYG 
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGI 491

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HGL   A+ LF ++     KP+D+T +  +SACSHSGLV EG ++F+S+ +++ I+P M 
Sbjct: 492 HGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMA 551

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  MVDLL RAG L+EA+ FIQ+MP  P + ++GA+L AC+ HKN+E+GE+ + ++  L
Sbjct: 552 HYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLL 611

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
            P+  G  VL++NIY++   WD  A +R+I    G +K+PGCS VE+   +H F  G   
Sbjct: 612 GPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQS 671

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQS  I   L+ L+ ++K  GY  D++ + HDVE+  +E +L  HSEK+AIAFG+LN+S
Sbjct: 672 HPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTS 731

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           P S I + KNLR+C DCH+A K+I+L+T REI VRD  RFH FK+G+C+C D+W
Sbjct: 732 PSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 324/824 (39%), Positives = 487/824 (59%), Gaps = 57/824 (6%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++ L   C SL     I   ++  GL       T ++S++  +NS + A  V   +    
Sbjct: 32  TSTLFHQCKSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSS 88

Query: 103 DALY--HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
             ++  + +++       L+D +    RM+     P  Y + ++LK CG++   R G  +
Sbjct: 89  HTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASV 148

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQN 217
           H  +  +GF  ++F   G+V+MY +CG  E A ++FD M ER   DLVSWN+IVA + Q 
Sbjct: 149 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 208

Query: 218 GFAELALDLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           G +  A+ +  RM E+ G R D +++V++LPA A+VG+   GK VHGYA+R+G    V V
Sbjct: 209 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFV 268

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-- 334
             A+VDMYAKCG +E A  VF+ MK ++VVSWN+M+  Y + G  ++A+ +F+K+ ++  
Sbjct: 269 GNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKI 328

Query: 335 ---------------------------------GVEPTNVTIMEALHACADLGDLERGIF 361
                                            G EP  VT++  L  CA  G L  G  
Sbjct: 329 ELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKE 388

Query: 362 VH-------KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAM 412
            H         LD+   G D+ + N+LI MYSKCK    A  +F  +  + +++V+W  +
Sbjct: 389 THCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVL 448

Query: 413 ILGYAQNGRVNEALNYFCKMRSKN--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           I G AQ+G  NEAL  F +M   +  + P++FT+   + A A L  +R+ + IHA V+R+
Sbjct: 449 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 508

Query: 471 CFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
            FE   +FV   LIDMY+K G V  AR +FD M++R+  +W  ++ GYG HG G+ A+++
Sbjct: 509 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 568

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F +M +    P+ +TF+  + ACSHSG+V++GI+YF  + KD+G+ P  +HY  MVDLL 
Sbjct: 569 FYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 628

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAGRL+EA + I+ MP++P   V+ A+L AC+++ NVELGE AAN+L EL+    G + L
Sbjct: 629 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTL 688

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYA A  W  +A++R +M+  G++K PGCS V+ +    +F++G   HP S++IY  
Sbjct: 689 LSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDL 748

Query: 710 LETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L  L+  IKA GYVPD   ++HDV+D  + +LLS HSEKLA+A+G+L ++PG+ I I KN
Sbjct: 749 LRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKN 808

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR CGDCH+A  YIS++   EIIVRD  RFH FKNG CSC  YW
Sbjct: 809 LRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 458/771 (59%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C   K+L   +++   I++ G+         L+ L+    S+++A ++F+   +K 
Sbjct: 34  LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKS 93

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ M+ GYA      +A +    M+ + + P  + +  +L  C     +  G+EIH 
Sbjct: 94  VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++  G + D      +++MYAKCG + +A ++FD M  RD VSW T+   +A++G+ E 
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +L     M +E  R   IT +++L A  ++ +L  GK +H + + + + S V VSTAL  
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG  + AR VF+ +  R+V++WN+MI  +V+ G  EEA   F +ML++GV P   T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L ACA  G L RG  +H    +  L +DV   N+LI+MYSK   +  A  +F ++ 
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSW  ++  YA   +V E+   F +M  + +K +  T + V+ A +    +++ K 
Sbjct: 394 KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKE 453

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA V+++    ++ V  AL+ MY KCG+V  A  +F+ M+ R V TWN +I G G +G 
Sbjct: 454 IHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGR 513

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++ +  M     +PN  TF+  +SAC    LVEEG   F  + KDYGI P   HY 
Sbjct: 514 GLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYA 573

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVD+L RAG L EA D I  +P++P   ++GA+L AC+IH NVE+GE+AA    +L+P 
Sbjct: 574 CMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQ 633

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G +V L+ IYAAA MW  +AK+R  M+++G++K PG S +E+  EVHSF +    HP+
Sbjct: 634 NAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPR 693

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ IY  LETL  ++K+ GYVPDT  + HD++D  +E  +  HSEKLAIA+GL+++ PG+
Sbjct: 694 TQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGT 753

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCH ATK+IS +T REII RD HRFH FKNG CSCGDYW
Sbjct: 754 PIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 196/381 (51%), Gaps = 1/381 (0%)

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D++  +H +G + D    V +L +      L +GK VH + +R G    V ++  L+ +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A CG V  AR +FD   +++VVSWN MI+ Y   G  +EA  +F  M  + +EP   T +
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L AC+    L  G  +H  + +  L  D ++ N+LISMY+KC  V  A  +F  +  +
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
             VSW  +   YA++G   E+L  +  M  + ++P   T ++V+ A   L+ +   K IH
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A ++ S +  +V V TAL  MY KCGA   AR +F+ ++ R V  WN MI G+   G  +
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A   F++MLE    P+  T+   +SAC+  G +  G        KD G+   +    A+
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNAL 372

Query: 585 VDLLGRAGRLNEAWDFIQKMP 605
           +++  +AG + +A     +MP
Sbjct: 373 INMYSKAGSMKDARQVFDRMP 393


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/813 (38%), Positives = 483/813 (59%), Gaps = 13/813 (1%)

Query: 5   SQCQLSVFTNSTPTQTLHEHKHTLSQRA-YIPSRIYRHPSALLLEVCTSLKEL---RRIL 60
           ++C+ S+FT       +    H L + + +I SR Y      L + C  L++    +++ 
Sbjct: 33  ARCR-SIFTGQVGANDV---LHRLGEGSNHIDSRTY----VKLFQRCMMLRDAGLGKQVR 84

Query: 61  PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
             II+SG          L+ L     ++ +A + F+ + +K    ++ ++ GYA+   + 
Sbjct: 85  DHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVK 144

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +A +   +M  + + P +  +  +L  C     ++ GKE H Q+I  GF  D    T +V
Sbjct: 145 EAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALV 204

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY K G ++ A ++FD + +RD+ ++N ++ G+A++G  E A  L  RM +EG + + I
Sbjct: 205 SMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRI 264

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           + +SIL   +   +L  GKAVH   M  G    V V+TAL+ MY  CG +E AR VFD M
Sbjct: 265 SFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKM 324

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           K R+VVSW  MI  Y E  N E+A  +F  M ++G++P  +T +  ++ACA   DL    
Sbjct: 325 KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAR 384

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +   GTD+ +  +L+ MY+KC  +  A  +F  +  + +VSW+AMI  Y +NG
Sbjct: 385 EIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENG 444

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              EA   F  M+  N++PD  T ++++ A   L  +     I+   I++    ++ V  
Sbjct: 445 CGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGN 504

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           ALI+M  K G++  AR +F+ M +R V TWNVMI GY  HG  + A++LF++ML+   +P
Sbjct: 505 ALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRP 564

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TF+  +SACS +G VEEG  +F+ L    GI P M+ YG MVDLLGRAG L+EA   
Sbjct: 565 NSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELL 624

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I +MP++P  +++  +L AC+I+ N+++ E+AA R    +P +G  +V L+++YAAA MW
Sbjct: 625 INRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMW 684

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           + +AKVR +ME +G++K  GC+ +E++ ++H+F      HPQ+  IY  L  L+  IK  
Sbjct: 685 ENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKRE 744

Query: 721 GYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GY+P T N +H+V +  +E  +S HSEKLAIA+G+L+   G+ I I KNLRVCGDCH+A+
Sbjct: 745 GYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSAS 804

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS VTGREII RD  RFH FKNGVCSCGDYW
Sbjct: 805 KFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 305/765 (39%), Positives = 466/765 (60%), Gaps = 32/765 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+++ K   + D  +VF+ I D+    +++ +    +F   + A+     M+ +++   
Sbjct: 134 LVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELS 193

Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    +   C ++G    +R GK++HG  +  G     F    ++ MYAK G+++++  
Sbjct: 194 SFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKA 252

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F+   +RD+VSWNT+++ F+Q+     AL     M  EG   D +TI S+LPA +++  
Sbjct: 253 LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLER 312

Query: 255 LRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           L +GK +H Y +R   D I N  V +ALVDMY  C +VE+ R VFD +  R +  WN+MI
Sbjct: 313 LDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMI 371

Query: 313 AAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           + Y   G  E+A+ +F +M+   G+ P   T+   + AC           +H    +L  
Sbjct: 372 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGF 431

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             D  + N+L+ MYS+  K+D +  IF  ++ +  VSWN MI GY  +GR + AL    +
Sbjct: 432 KEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHE 491

Query: 432 M-RSKNI----------------KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           M R +N                 KP++ T+++V+P  A L+ I   K IHA  IR+    
Sbjct: 492 MQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLAS 551

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           ++ V +AL+DMYAKCG +  +R +F+ M  ++V TWNV+I   G HG G+ A+ELF  M+
Sbjct: 552 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 611

Query: 535 E-----GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
                 G  KPN++TF+   +ACSHSGL+ EG++ F  +K D+G+EP  DHY  +VDLLG
Sbjct: 612 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 671

Query: 590 RAGRLNEAWDFIQKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           RAG+L EA++ +  MP E   +  + ++LGAC+IH+NVELGE AA  L  L+P+   ++V
Sbjct: 672 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 731

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+NIY++A +W+K  +VR  M + G++K PGCS +E ++EVH F +G   HPQS++++ 
Sbjct: 732 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 791

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
           FLETL ++++  GYVPDT+ + H+V++  +ENLL  HSEKLAIAFG+LN+ PG+TI + K
Sbjct: 792 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 851

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVC DCH ATK+IS +  REIIVRD+ RFH FK G CSCGDYW
Sbjct: 852 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 181/598 (30%), Positives = 296/598 (49%), Gaps = 53/598 (8%)

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           P +  A +   L+   +     +A+S  I M      P  + +  +LK    + +++ G+
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 159 EIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           +IH   +  G+ S  +     +VNMY KCG I +  K+FDR+ +RD VSWN+ +A   + 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG---SLRIGKAVHGYAMRAGFDSIV 274
              E AL+    M  E       T+VS+  A +N+G    LR+GK +HGY++R G D   
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
             + AL+ MYAK GRV+ ++ +F+    R++VSWN+MI+++ +     EA+  F+ M+ +
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           GVE   VTI   L AC+ L  L+ G  +H  +L    L  +  + ++L+ MY  C++V+ 
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALA 452
              +F  + G+ +  WNAMI GYA+NG   +AL  F +M +   + P++ TM SV+PA  
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
                   + IH   ++  F+++ +V  AL+DMY++ G +  +  +FD M  R   +WN 
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471

Query: 513 MIDGYGTHGLGKAAVELFNKMLE-----------------GPTKPNDITFLCAISACSHS 555
           MI GY   G    A+ L ++M                   GP KPN IT +  +  C+  
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531

Query: 556 GLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
             + +G  IH +     L  D  +        A+VD+  + G LN +     +MP +  I
Sbjct: 532 AAIAKGKEIHAYAIRNMLASDITVG------SALVDMYAKCGCLNLSRRVFNEMPNKNVI 585

Query: 611 TVFGAMLGACKIHKNVELGEKA----------ANRLFELDPDEGGYHVLLANIYAAAS 658
           T +  ++ AC +H     GE+A          A R  E  P+E    V    ++AA S
Sbjct: 586 T-WNVLIMACGMHGK---GEEALELFKNMVAEAGRGGEAKPNE----VTFITVFAACS 635



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 169/344 (49%), Gaps = 27/344 (7%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A +L  C+ L+ L   + I   ++++  L +     + LV ++C    +    RVF+ I 
Sbjct: 301 ASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 360

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +   L++ M+ GYA+    + A+   I M +   + P       ++  C         +
Sbjct: 361 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKE 420

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IHG  +  GF  D +    +++MY++ G+++ +  +FD M  RD VSWNT++ G+  +G
Sbjct: 421 SIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG 480

Query: 219 FAELALDLVTRMHEEGR-----------------RGDFITIVSILPAVANVGSLRIGKAV 261
               AL L+  M                      + + IT++++LP  A + ++  GK +
Sbjct: 481 RYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI 540

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H YA+R    S + V +ALVDMYAKCG +  +R VF+ M ++NV++WN +I A    G  
Sbjct: 541 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 600

Query: 322 EEAMRIFQKMLDQG-----VEPTNVTIMEALHACADLGDLERGI 360
           EEA+ +F+ M+ +       +P  VT +    AC+  G +  G+
Sbjct: 601 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGL 644


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/791 (36%), Positives = 473/791 (59%), Gaps = 8/791 (1%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLF 82
           ++ +QR  +    Y  PS  ++  C  L +    + I   ++  G          L+ ++
Sbjct: 103 YSETQRIRLQPDTYTFPS--VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMY 160

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           C++N L  A +VFE +P +    +++++ GY      ++A+    R R   V P  Y  +
Sbjct: 161 CRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMS 220

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L+ CG +G +  G  IHG +   G   D+    G+++MY K   + +  ++FD+M  R
Sbjct: 221 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 280

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D VSWNT++ G++Q G  E ++ L   M  +  + D +TI SIL A  ++G L  GK VH
Sbjct: 281 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVH 339

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            Y + +G++     S  L++MYAKCG +  ++ VF GMK ++ VSWNSMI  Y++ G+ +
Sbjct: 340 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 399

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EAM++F KM+   V+P +VT +  L     LGDL  G  +H  L ++   +++ ++N+L+
Sbjct: 400 EAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLV 458

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY+KC ++  +  +F  ++ + +++WN +I     +   N  L    +MR++ + PD  
Sbjct: 459 DMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 518

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           TM+S++P  + L+  R  K IH  + +   E +V V   LI+MY+KCG++  +  +F +M
Sbjct: 519 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 578

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
             + V TW  +I   G +G GK AV  F +M      P+ + F+  I ACSHSGLVEEG+
Sbjct: 579 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 638

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
           +YF  +KKDY IEP ++HY  +VDLL R+  L++A DFI  MP++P  +++GA+L AC++
Sbjct: 639 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 698

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
             + E+ E+ + R+ EL+PD+ GY+VL++NIYAA   WD++  +R  ++ +GL+K PGCS
Sbjct: 699 SGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 758

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLL 741
            +E++N+V+ F +G+    Q + +   L  L   +   GY+ +   + HD+++  + ++L
Sbjct: 759 WMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDIL 818

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
             HSE+LAIAFGLLN+ PG+ + + KNLRVC DCH  TKYIS +  RE++VRD +RFH F
Sbjct: 819 CGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVF 878

Query: 802 KNGVCSCGDYW 812
           K+G CSCGDYW
Sbjct: 879 KDGACSCGDYW 889



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 176/610 (28%), Positives = 305/610 (50%), Gaps = 17/610 (2%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE-PIPDKLDALYHTMLKGY 113
           +L ++  LII  GL    +F  KL++ +  +   + +  VF    P     L++++++  
Sbjct: 31  QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRAL 90

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
                  +A+S     +   + P  Y +  ++  C  + +    K IH +++  GF  DL
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDL 150

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           +    +++MY +   +++A K+F+ MP RD+VSWN++++G+  NG+   AL++  R    
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNL 210

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   D  T+ S+L A   +GS+  G  +HG   + G    V V+  L+ MY K   +   
Sbjct: 211 GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDG 270

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +FD M  R+ VSWN+MI  Y + G  EE++++F +M++Q  +P  +TI   L AC  L
Sbjct: 271 RRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHL 329

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           GDLE G +VH  +       D + +N LI+MY+KC  +  + ++FS ++ K  VSWN+MI
Sbjct: 330 GDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI 389

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
             Y QNG  +EA+  F KM   ++KPDS T V ++    +L  +   K +H  + +  F 
Sbjct: 390 NVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFN 448

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            N+ V   L+DMYAKCG +G +  +F+ M  R + TWN +I            + + ++M
Sbjct: 449 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 508

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
                 P+  T L  +  CS      +G      + K  G+E  +     ++++  + G 
Sbjct: 509 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIEMYSKCGS 567

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----PDEGGYHV 648
           L  ++   + M  +  +T + A++ AC ++     G+KA     E++     PD    HV
Sbjct: 568 LRNSFQVFKLMKTKDVVT-WTALISACGMYGE---GKKAVRAFGEMEAAGIVPD----HV 619

Query: 649 LLANIYAAAS 658
               I  A S
Sbjct: 620 AFVAIIFACS 629


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/765 (40%), Positives = 460/765 (60%), Gaps = 32/765 (4%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            LV+++ K   L+ A +VF+ IPD+    +++M+    +F   + ++     M  ++V P 
Sbjct: 373  LVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPT 432

Query: 138  VYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             +    +   C  V G +R GK++H   + NG  L  +    +V MYA+ G++ +A  +F
Sbjct: 433  SFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALF 491

Query: 197  DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
                 +DLVSWNT+++  +QN   E AL  V  M  +G R D +T+ S+LPA + +  LR
Sbjct: 492  GVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLR 551

Query: 257  IGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            IG+ +H YA+R G D I N  V TALVDMY  C + +  RLVFDG+  R V  WN+++A 
Sbjct: 552  IGREIHCYALRNG-DLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAG 610

Query: 315  YVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y      ++A+R+F +M+ +    P   T    L AC           +H  + +   G 
Sbjct: 611  YARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK 670

Query: 374  DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            D  + N+L+ MYS+  +V+ +  IF ++  + +VSWN MI G    GR ++ALN   +M+
Sbjct: 671  DKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQ 730

Query: 434  SKN------------------IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
             +                    KP+S T+++V+P  A L+ +   K IHA  ++     +
Sbjct: 731  RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMD 790

Query: 476  VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            V V +AL+DMYAKCG +  A  +FD M  R+V TWNV+I  YG HG G+ A+ELF  M  
Sbjct: 791  VAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTA 850

Query: 536  GP------TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
            G        +PN++T++   +ACSHSG+V+EG+H F ++K  +G+EP  DHY  +VDLLG
Sbjct: 851  GGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLG 910

Query: 590  RAGRLNEAWDFIQKMPIEPG-ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
            R+GR+ EA++ I  MP     +  + ++LGAC+IH++VE GE AA  LF L+P+   ++V
Sbjct: 911  RSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYV 970

Query: 649  LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
            L++NIY++A +WD+   VR  M++ G++K PGCS +E  +EVH F SG   HPQSK ++ 
Sbjct: 971  LMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHE 1030

Query: 709  FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            +LETL   ++  GYVPD + + H+V+D  +E +L  HSE+LAIAFGLLN+ PG+TI + K
Sbjct: 1031 YLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAK 1090

Query: 768  NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            NLRVC DCH ATK IS +  REII+RD+ RFH F NG CSCGDYW
Sbjct: 1091 NLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 280/562 (49%), Gaps = 34/562 (6%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L+     +S  DA+S    M      P  + +  +LK    V ++  GK+IH  +   G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360

Query: 169 FSL--DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
            +    +     +VNMY KCG +  A ++FD +P+RD VSWN+++A   +    EL+L L
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420

Query: 227 VTRMHEEGRRGDFITIVSILPAVANV-GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
              M  E       T+VS+  A ++V G +R+GK VH Y +R G D     + ALV MYA
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYA 479

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           + GRV  A+ +F     +++VSWN++I++  +    EEA+     M+  GV P  VT+  
Sbjct: 480 RLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLAS 539

Query: 346 ALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            L AC+ L  L  G  +H   L    L  +  +  +L+ MY  CK+  +   +F  +  +
Sbjct: 540 VLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRR 599

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWI 463
           T+  WNA++ GYA+N   ++AL  F +M S++   P++ T  SV+PA     V    + I
Sbjct: 600 TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI 659

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  +++  F K+ +V  AL+DMY++ G V  ++ +F  MN+R + +WN MI G    G  
Sbjct: 660 HGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRY 719

Query: 524 KAAVELFNKMLEG------------------PTKPNDITFLCAISACSHSGLVEEG--IH 563
             A+ L ++M                     P KPN +T +  +  C+    + +G  IH
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            + ++K+   ++  +    A+VD+  + G LN A     +MPI   IT +  ++ A  +H
Sbjct: 780 AY-AVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPIRNVIT-WNVLIMAYGMH 835

Query: 624 KNVELGEKAANRLFELDPDEGG 645
                GE+A   LF +    GG
Sbjct: 836 GK---GEEAL-ELFRIMTAGGG 853



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 29/346 (8%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A +L  C+ L+ LR    I    +++G L +     T LV ++C          VF+ + 
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV 597

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +  A+++ +L GYA+    D A+   + M    +  P    +  +L  C         +
Sbjct: 598 RRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKE 657

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IHG ++  GF  D +    +++MY++ G++E +  +F RM +RD+VSWNT++ G    G
Sbjct: 658 GIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCG 717

Query: 219 FAELALDLVTRMH----EEGR--------------RGDFITIVSILPAVANVGSLRIGKA 260
             + AL+L+  M     E+G               + + +T++++LP  A + +L  GK 
Sbjct: 718 RYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKE 777

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H YA++      V V +ALVDMYAKCG +  A  VFD M  RNV++WN +I AY   G 
Sbjct: 778 IHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGK 837

Query: 321 PEEAMRIFQKMLDQG------VEPTNVTIMEALHACADLGDLERGI 360
            EEA+ +F+ M   G      + P  VT +    AC+  G ++ G+
Sbjct: 838 GEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGL 883



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ ++   W  ++     +    +A++ +  M +    PD+F   +V+ A A +  +   
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 461 KWIHALVIR--SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           K IHA V +       +V V  +L++MY KCG +  AR +FD + +R   +WN MI    
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-SGLVEEG--IHYFTSLKKDYGIE 575
                + ++ LF  ML     P   T +    ACSH  G V  G  +H +T    D    
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGD---- 465

Query: 576 PVMDHY--GAMVDLLGRAGRLNEA 597
             +  Y   A+V +  R GR+N+A
Sbjct: 466 --LRTYTNNALVTMYARLGRVNDA 487


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/772 (38%), Positives = 442/772 (57%), Gaps = 37/772 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + K+  ++ A +VF  +  +    + +M+  YA       A     RM   ++ P 
Sbjct: 97  LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  +LK C +   + +G++IH  +   G   D+   T ++ MY+KCG+I  A ++F 
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M ER++VSW  I+   AQ+     A +L  +M + G   + +T VS+L +     +L  
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H +    G ++ + V+ AL+ MY KC  V+ AR +FD M  R+V+SW++MIA Y +
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336

Query: 318 GG-----NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            G     + +E  ++ ++M  +GV P  VT M  L AC   G LE+G  +H  L ++   
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV------------------------- 407
            D S+  ++ +MY+KC  +  A  +FSK+  K +V                         
Sbjct: 397 LDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEM 456

Query: 408 ------SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
                 SWN MI GYAQNG + +       M+++  +PD  T+++++ A   L+ +   K
Sbjct: 457 PTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGK 516

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +HA  ++   E +  V T+LI MY+KCG V  AR +FD M+ R    WN M+ GYG HG
Sbjct: 517 LVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHG 576

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  AV+LF +ML+    PN+IT    ISACS +GLV+EG   F  +++D+ + P   HY
Sbjct: 577 DGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHY 636

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDLLGRAGRL EA +FIQ MP EP I+V+ A+LGACK H NV+L E+AA+ + EL+P
Sbjct: 637 GCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEP 696

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
                ++ L+NIYA A  WD   KVR +M+ +GL+K  G S +E+   +H+F +    HP
Sbjct: 697 SYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHP 756

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +   I+  LETL  E+K AGY PD   + HDV+D  +E  L  HSEKLAIA+GLL +  G
Sbjct: 757 EIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSG 816

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I I KNLRVCGDCH ATK+IS +  REI+ RD +RFH F NG CSCGD+W
Sbjct: 817 TPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/601 (27%), Positives = 273/601 (45%), Gaps = 94/601 (15%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C +   L++ R+I  ++   G+       T L++++ K   +S A  VF  + ++ 
Sbjct: 163 ILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERN 222

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  +++  A+   L++A     +M    ++P    +  LL  C     + RG+ IH 
Sbjct: 223 VVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHS 282

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +   G   D+     ++ MY KC  ++EA ++FDRM +RD++SW+ ++AG+AQ+G+ + 
Sbjct: 283 HISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDK 342

Query: 223 -----ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                   L+ RM  EG   + +T +SIL A    G+L  G+ +H    + GF+   ++ 
Sbjct: 343 ESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ 402

Query: 278 TALVDMYAKCGRV-------------------------------ETARLVFDGMKSRNVV 306
           TA+ +MYAKCG +                                +A  VF  M +RNVV
Sbjct: 403 TAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVV 462

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN MIA Y + G+  +   +   M  +G +P  VT++  L AC  L  LERG  VH   
Sbjct: 463 SWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEA 522

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +L L +D  +  SLI MYSKC +V  A  +F K+  +  V+WNAM+ GY Q+G   EA+
Sbjct: 523 VKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAV 582

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + F +M  + + P+  T+ +VI A                                    
Sbjct: 583 DLFKRMLKERVSPNEITLTAVISAC----------------------------------- 607

Query: 487 AKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           ++ G V   R +F MM E    T     +  M+D  G  G  + A E    M   P +P+
Sbjct: 608 SRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSM---PCEPD 664

Query: 542 DITFLCAISAC-SHSG--LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
              +   + AC SH+   L E   H+   L+  Y        Y  + ++  +AGR    W
Sbjct: 665 ISVWHALLGACKSHNNVQLAERAAHHILELEPSYA-----SVYITLSNIYAQAGR----W 715

Query: 599 D 599
           D
Sbjct: 716 D 716



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 257/545 (47%), Gaps = 38/545 (6%)

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           K   L +A+  L  ++   +      Y  +++ C        GK +H QL   G  +D++
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               ++N Y+K   +  A ++F RM  RD+V+W++++A +A N     A D   RM +  
Sbjct: 93  LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              + IT +SIL A  N   L  G+ +H      G ++ V V+TAL+ MY+KCG +  A 
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VF  M  RNVVSW ++I A  +     EA  ++++ML  G+ P  VT +  L++C    
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            L RG  +H  + +  L TD+ + N+LI+MY KC  V  A +IF ++  + ++SW+AMI 
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332

Query: 415 GYAQNG-----RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           GYAQ+G      ++E      +MR + + P+  T +S++ A      +   + IHA + +
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392

Query: 470 SCFE-------------------------------KNVFVMTALIDMYAKCGAVGTARAL 498
             FE                               KNV   T+ + MY KCG + +A  +
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R+V +WN+MI GY  +G      EL + M     +P+ +T +  + AC     +
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E G        K  G+E       +++ +  + G++ EA     KM     +  + AML 
Sbjct: 513 ERGKLVHAEAVK-LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTV-AWNAMLA 570

Query: 619 ACKIH 623
               H
Sbjct: 571 GYGQH 575



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 7/303 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T  +S++ K   LS A +VF  +P +    ++ M+ GYA+   +      L  M+ +   
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       +L+ CG +  + RGK +H + +  G   D    T ++ MY+KCGQ+ EA  +
Sbjct: 494 PDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTV 553

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M  RD V+WN ++AG+ Q+G    A+DL  RM +E    + IT+ +++ A +  G +
Sbjct: 554 FDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLV 613

Query: 256 RIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMI 312
           + G+ +    M+  F           +VD+  + GR++ A      M     +S W++++
Sbjct: 614 QEGREIF-RMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL-HACADLGDLERGIFVHKLLDQLKL 371
            A     N + A R    +L+  +EP+  ++   L +  A  G  +    V +++D   L
Sbjct: 673 GACKSHNNVQLAERAAHHILE--LEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGL 730

Query: 372 GTD 374
             D
Sbjct: 731 KKD 733


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/772 (39%), Positives = 477/772 (61%), Gaps = 7/772 (0%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           L+   CT++   +++  L++  G     +  T+LV+L+     LS ++  F+ I  K   
Sbjct: 56  LVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIF 115

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            +++M+  Y +     D++  +  +     V P  Y +  +LK C  + +   G+++H  
Sbjct: 116 SWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCW 172

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++  GF  D++    ++++Y++ G +E A+K+F  MP RD+ SWN +++GF QNG    A
Sbjct: 173 VLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEA 232

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L ++ RM  E  + D +T+ S+LP  A    +  G  VH Y ++ G +S V VS AL++M
Sbjct: 233 LRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINM 292

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y+K GR++ A+ VFDGM+ R++VSWNS+IAAY +  +P  A+  F++ML  G+ P  +T+
Sbjct: 293 YSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTV 352

Query: 344 MEALHACADLGDLERGIFVHKLLDQLK-LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +        L D   G  VH  + + + L  D+ + N+L++MY+K   +D A  +F +L 
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAK 461
            + ++SWN +I GYAQNG  +EA++ +  M   + I P+  T VS++PA + +  ++   
Sbjct: 413 SRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGM 472

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  +I++C   +VFV T LIDMY KCG +  A +LF  + +     WN +I   G HG
Sbjct: 473 KIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHG 532

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G+ A++LF  M     K + ITF+  +SACSHSGLV+E    F +++K+Y I+P + HY
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDL GRAG L +A++ +  MPI+   +++G +L AC+IH N ELG  A++RL E+D 
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDS 652

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GY+VLL+NIYA    W+   KVR++   +GL+KTPG S V + + V  FY+G+  HP
Sbjct: 653 ENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHP 712

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q   IY  L  L  ++K+ GYVPD + +  DVE+  +E +L+SHSE+LAI FG++++ P 
Sbjct: 713 QCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPK 772

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S I I KNLRVCGDCHNATKYIS +T REIIVRD +RFH FK+G+CSCGDYW
Sbjct: 773 SPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 311/771 (40%), Positives = 470/771 (60%), Gaps = 8/771 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L + CT     +R+  L++ SG    +    +LV+L+     +S +   F+ I  K    
Sbjct: 82  LFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYT 141

Query: 106 YHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +++M+  Y +     +A+  F   +         Y +  +LK C  + +   G++IH  +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWV 198

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
              GF  D+F    +++MY++ G +  A  +FD MP RD+ SWN +++G  QNG A  AL
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D++  M  EG   D +T+ SILP  A +G +     +H Y ++ G +  + VS AL++MY
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY 318

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           AK G +  A+ VF  M  R+VVSWNS+IAAY +  +P  A   F KM   G+EP  +T++
Sbjct: 319 AKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLV 378

Query: 345 EALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
                 A   D +    VH  ++ +  L   V + N+++ MY+K   +D A  +F+ +  
Sbjct: 379 SLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV 438

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKW 462
           K +VSWN +I GY QNG  +EA+  +  M   + IK +  T VS++ A A +  ++    
Sbjct: 439 KDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR 498

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  +I++    +VFV T LID+Y KCG +  A  LF  +       WN +I  +G HG 
Sbjct: 499 IHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A++LF +M +   KP+ +TF+  +SACSHSGLV+EG  +F  L ++YGI+P + HYG
Sbjct: 559 GEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYG 617

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGRAG L  A+DFI+ MP+ P  +++GA+LGAC+IH N+ELG+ A++RLFE+D +
Sbjct: 618 CMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSE 677

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             GY+VLL+NIYA    W+ + KVR++  ++GL+KTPG S +E+   V  FY+G+  HP+
Sbjct: 678 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPK 737

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            K IY  L  L  ++K+ GY+PD + +  DVE+  +E++L+SHSE+LAIAFG++++ P S
Sbjct: 738 CKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKS 797

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVCGDCHNATK+IS +T REI+VRD  RFH FKNG+CSCGDYW
Sbjct: 798 AIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/791 (36%), Positives = 473/791 (59%), Gaps = 8/791 (1%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLF 82
           ++ +QR  +    Y  PS  ++  C  L +    + I   ++  G          L+ ++
Sbjct: 162 YSETQRIRLQPDTYTFPS--VINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMY 219

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           C++N L  A +VFE +P +    +++++ GY      ++A+    R R   V P  Y  +
Sbjct: 220 CRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMS 279

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L+ CG +G +  G  IHG +   G   D+    G+++MY K   + +  ++FD+M  R
Sbjct: 280 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 339

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D VSWNT++ G++Q G  E ++ L   M  +  + D +TI SIL A  ++G L  GK VH
Sbjct: 340 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVH 398

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            Y + +G++     S  L++MYAKCG +  ++ VF GMK ++ VSWNSMI  Y++ G+ +
Sbjct: 399 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 458

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EAM++F KM+   V+P +VT +  L     LGDL  G  +H  L ++   +++ ++N+L+
Sbjct: 459 EAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLV 517

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY+KC ++  +  +F  ++ + +++WN +I     +   N  L    +MR++ + PD  
Sbjct: 518 DMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 577

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           TM+S++P  + L+  R  K IH  + +   E +V V   LI+MY+KCG++  +  +F +M
Sbjct: 578 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 637

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
             + V TW  +I   G +G GK AV  F +M      P+ + F+  I ACSHSGLVEEG+
Sbjct: 638 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 697

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
           +YF  +KKDY IEP ++HY  +VDLL R+  L++A DFI  MP++P  +++GA+L AC++
Sbjct: 698 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 757

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
             + E+ ++ + R+ EL+PD+ GY+VL++N+YAA   WD++  +R  ++ +GL+K PGCS
Sbjct: 758 SGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCS 817

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLL 741
            +E++N+V+ F +G+    Q + +   L  L   +   GY+ +   + HD+++  + ++L
Sbjct: 818 WMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDIL 877

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
             HSE+LAIAFGLLN+ PG+ + + KNLRVC DCH  TKYIS +  RE++VRD +RFH F
Sbjct: 878 CGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVF 937

Query: 802 KNGVCSCGDYW 812
           K+G CSCGDYW
Sbjct: 938 KDGACSCGDYW 948



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 175/610 (28%), Positives = 304/610 (49%), Gaps = 17/610 (2%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE-PIPDKLDALYHTMLKGY 113
           +L ++  LII  GL    +F  KL++ +  +   + +  VF    P      ++++++  
Sbjct: 90  QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRAL 149

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
                  +A+S     +   + P  Y +  ++  C  + +    K IH +++  GF  DL
Sbjct: 150 THNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDL 209

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           +    +++MY +   +++A K+F+ MP RD+VSWN++++G+  NG+   AL++  R    
Sbjct: 210 YIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNL 269

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   D  T+ S+L A   +GS+  G  +HG   + G    V V+  L+ MY K   +   
Sbjct: 270 GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDG 329

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +FD M  R+ VSWN+MI  Y + G  EE++++F +M++Q  +P  +TI   L AC  L
Sbjct: 330 RRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHL 388

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           GDLE G +VH  +       D + +N LI+MY+KC  +  + ++FS ++ K  VSWN+MI
Sbjct: 389 GDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI 448

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
             Y QNG  +EA+  F KM   ++KPDS T V ++    +L  +   K +H  + +  F 
Sbjct: 449 NVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFN 507

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            N+ V   L+DMYAKCG +G +  +F+ M  R + TWN +I            + + ++M
Sbjct: 508 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 567

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
                 P+  T L  +  CS      +G      + K  G+E  +     ++++  + G 
Sbjct: 568 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIEMYSKCGS 626

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----PDEGGYHV 648
           L  ++   + M  +  +T + A++ AC ++     G+KA     E++     PD    HV
Sbjct: 627 LRNSFQVFKLMKTKDVVT-WTALISACGMYGE---GKKAVRAFGEMEAAGIVPD----HV 678

Query: 649 LLANIYAAAS 658
               I  A S
Sbjct: 679 AFVAIIFACS 688


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/695 (44%), Positives = 434/695 (62%), Gaps = 18/695 (2%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           VAP  Y + + LK C  + +   G+ IH   I  G   DLF  T +++MY KC  + +A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALD--LVTRMHEEGRRGDFITIVSILPAVAN 251
            +F  MP RDLV+WN ++AG+A +G    A+   L  +M     R +  T+V++LP +A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVN----------VSTALVDMYAKCGRVETARLVFDGMK 301
            G+L  G +VH Y +RA      N          + TAL+DMYAKCG +  AR VFD M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV---EPTNVTIMEALHACADLGDLER 358
           +RN V+W+++I  +V      +A  +F+ ML QG+    PT  +I  AL ACA L  L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRM 243

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H LL +  +  D++  NSL+SMY+K   +D+A  +F ++  K  VS++A++ GY Q
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           NGR  EA   F KM++ N++PD+ TMVS+IPA + L+ +++ +  H  VI         +
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             ALIDMYAKCG +  +R +F+MM  R + +WN MI GYG HGLGK A  LF +M     
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+ +TF+C +SACSHSGLV EG H+F  +   YG+ P M+HY  MVDLL R G L+EA+
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           +FIQ MP+   + V+ A+LGAC+++KN++LG+K +  + EL P+  G  VLL+NIY+AA 
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            +D+ A+VR I + +G +K+PGCS +E+   +H+F  G   HPQS  IY  L+ ++  IK
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 603

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GY PDT+ +  D+E+  +E  L  HSEKLAIA+G+L+ S   TI + KNLRVCGDCH 
Sbjct: 604 KLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHT 663

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K+ISLV  R IIVRD +RFH FKNG CSCGD+W
Sbjct: 664 VIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 250/534 (46%), Gaps = 29/534 (5%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           Y  P AL  + C++L +    R I    I +GL       T L+ ++ K   L DAA +F
Sbjct: 11  YTFPFAL--KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLI--RMRYDDVAPVVYNYTYLLKVCGDVGE 153
             +P +    ++ ML GYA       AV+ L+  +M+   + P       LL +    G 
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 154 IRRGKEIHGQLI----------VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           + +G  +H   I           +  +  +   T +++MYAKCG +  A ++FD MP R+
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI---TIVSILPAVANVGSLRIGKA 260
            V+W+ ++ GF        A  L   M  +G    F+   +I S L A A++  LR+G+ 
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQ 246

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    ++G  + +    +L+ MYAK G ++ A  +FD M  ++ VS++++++ YV+ G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA  +F+KM    VEP   T++  + AC+ L  L+ G   H  +    L ++ S+ N+
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY+KC ++D +  +F+ +  + +VSWN MI GY  +G   EA   F +M +    PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 441 SFTMVSVIPALAELS-VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T + ++ A +    VI    W H +         +     ++D+ ++ G +  A    
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 500 DMMNER-HVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             M  R  V  W  ++     Y    LGK    +  ++  GP    +   L  I
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQEL--GPEGTGNFVLLSNI 538



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 46/337 (13%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML   V P N T   AL AC+ L D   G  +H+      L  D+ ++ +L+ MY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK--NIKPDSFTMVSVI 448
           +  AA IF+ +  + LV+WNAM+ GYA +G  + A+ +   M+ +   ++P++ T+V+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKN----------VFVMTALIDMYAKCGAVGTARAL 498
           P LA+   +     +HA  IR+C   N          V + TAL+DMYAKCG++  AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACS---- 553
           FD M  R+  TW+ +I G+        A  LF  ML +G    +  +   A+ AC+    
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 554 -------HSGLVEEGIH----YFTSLKKDYGIEPVMDH---------------YGAMVDL 587
                  H+ L + G+H       SL   Y    ++D                Y A+V  
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 588 LGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACK 621
             + GR  EA+   +KM    +EP      +++ AC 
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 337



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 153/315 (48%), Gaps = 14/315 (4%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C SL  LR   ++  L+ KSG+         L+S++ K   +  A  +F+ +  K  
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  ++ GY +    ++A     +M+  +V P       L+  C  +  ++ G+  HG 
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G + +      +++MYAKCG+I+ + ++F+ MP RD+VSWNT++AG+  +G  + A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVST 278
             L   M+  G   D +T + +L A ++ G +  GK       HGY +    +  +    
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI---- 467

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +VD+ ++ G ++ A      M  R +V  W +++ A     N +   ++ + + + G E
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527

Query: 338 PT-NVTIMEALHACA 351
            T N  ++  +++ A
Sbjct: 528 GTGNFVLLSNIYSAA 542


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/735 (42%), Positives = 441/735 (60%), Gaps = 61/735 (8%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           +   ++LK CG++   R G   HG +  NGF  ++F    +V MY++CG +EEA  +FD 
Sbjct: 11  FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 70

Query: 199 MPER---DLVSWNTIVAGFAQNGFAELALDLVTRM----HEE--GRRGDFITIVSILPAV 249
           + +R   D++SWN+IV+   ++  A  ALDL ++M    HE+    R D I+IV+ILPA 
Sbjct: 71  ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 130

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
            ++ ++   K VHG A+R G    V V  AL+D YAKCG +E A  VF+ M+ ++VVSWN
Sbjct: 131 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190

Query: 310 SMIAAYVEGGN-----------------------------------PEEAMRIFQKMLDQ 334
           +M+A Y + GN                                     EA+ +F++M+  
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKL--------LDQLKLGTDVSMT--NSLISM 384
           G  P  VTI+  L ACA LG   +G+ +H          LD    G D  +   N+LI M
Sbjct: 251 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 310

Query: 385 YSKCKKVDRAADIFSK--LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK--NIKPD 440
           YSKC+    A  IF    L+ + +V+W  MI G+AQ G  N+AL  F +M S+   + P+
Sbjct: 311 YSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 370

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIR--SCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           ++T+  ++ A A L+ IR  K IHA V+R         FV   LI+MY+KCG V TAR +
Sbjct: 371 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 430

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M+++   +W  M+ GYG HG G  A+++F+KM +    P+DITFL  + ACSH G+V
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           ++G+ YF S+  DYG+ P  +HY   +DLL R GRL++AW  ++ MP+EP   V+ A+L 
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++H NVEL E A N+L E++ +  G + L++NIYA A  W  +A++R +M+K G++K 
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 610

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQ 737
           PGCS V+ +    SF+ G   HP S +IY  LE+LID IKA GYVP+TN ++HDV++  +
Sbjct: 611 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEK 670

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
            NLL  HSEKLA+A+GLL + PG  I I KNLRVCGDCH+A  YIS +   EI+VRD  R
Sbjct: 671 NNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSR 730

Query: 798 FHCFKNGVCSCGDYW 812
           FH FKNG CSCG YW
Sbjct: 731 FHHFKNGSCSCGGYW 745



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 259/555 (46%), Gaps = 65/555 (11%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK- 101
           +L+ C  L   R       LI  +G          LV+++ +  SL +A+ +F+ I  + 
Sbjct: 16  VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 75

Query: 102 ------LDALYHTMLKGYAKFASLD--DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
                  +++    +K    + +LD    ++ ++  +  +    + +   +L  CG +  
Sbjct: 76  IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 135

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + + KE+HG  I NG  LD+F    +++ YAKCG +E A K+F+ M  +D+VSWN +VAG
Sbjct: 136 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 195

Query: 214 FAQNGFAELALDLVTRMHEE----------------GRRG-------------------D 238
           ++Q+G  + A +L   M +E                 +RG                   +
Sbjct: 196 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 255

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMR----------AGFDSIVNVSTALVDMYAKCG 288
            +TI+S+L A A++G+   G  +H Y+++           G D  + V  AL+DMY+KC 
Sbjct: 256 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 315

Query: 289 RVETARLVFDG--MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ--GVEPTNVTIM 344
             + AR +FD   ++ RNVV+W  MI  + + G+  +A+++F +M+ +  GV P   TI 
Sbjct: 316 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 375

Query: 345 EALHACADLGDLERGIFVHK--LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
             L ACA L  +  G  +H   L       +   + N LI+MYSKC  VD A  +F  + 
Sbjct: 376 CILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS 435

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
            K+ +SW +M+ GY  +GR +EAL+ F KMR     PD  T + V+ A +   ++     
Sbjct: 436 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 495

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTH 520
           +  ++                ID+ A+ G +  A + + DM  E     W  ++     H
Sbjct: 496 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 555

Query: 521 GLGKAAVELFNKMLE 535
              + A    NK++E
Sbjct: 556 SNVELAEHALNKLVE 570



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 216/451 (47%), Gaps = 65/451 (14%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M   G R D  T+  +L A   + S R G A HG     GF+S V +  ALV MY++CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 290 VETARLVFDGMKSR---NVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTN----- 340
           +E A ++FD +  R   +V+SWNS+++A+V+  N   A+ +F KM L    +PTN     
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIF 398
           ++I+  L AC  L  + +   VH   + ++ GT  DV + N+LI  Y+KC  ++ A  +F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHG--NAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 178

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK-------------------- 438
           + ++ K +VSWNAM+ GY+Q+G    A   F  MR +NI                     
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 439 ---------------PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF----------E 473
                          P+  T++SV+ A A L        IHA  +++C           +
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           +++ V  ALIDMY+KC +   AR++FD   + ER+V TW VMI G+  +G    A++LF 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 532 KMLEGP--TKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +M+  P    PN  T  C + AC+H   +  G  IH +      Y           ++++
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA-NCLINM 417

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
             + G ++ A      M  +  I+    M G
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTG 448



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 140/289 (48%), Gaps = 21/289 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIP--DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-- 133
           L+ ++ K  S   A  +F+ IP  ++    +  M+ G+A++   +DA+   + M  +   
Sbjct: 307 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 366

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEE 191
           VAP  Y  + +L  C  +  IR GK+IH  ++ +    S   F    ++NMY+KCG ++ 
Sbjct: 367 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 426

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +FD M ++  +SW +++ G+  +G    ALD+  +M + G   D IT + +L A ++
Sbjct: 427 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486

Query: 252 VGSLRIG-------KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RLVFDGMKSR 303
            G +  G        A +G   RA   +        +D+ A+ GR++ A + V D     
Sbjct: 487 CGMVDQGLSYFDSMSADYGLTPRAEHYAYA------IDLLARFGRLDKAWKTVKDMPMEP 540

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIMEALHACA 351
             V W ++++A     N E A     K+++   E   + T++  ++A A
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATA 589


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/755 (39%), Positives = 461/755 (61%), Gaps = 29/755 (3%)

Query: 82  FCKYNSLSDAARVFE-----PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV-- 134
            C++  L +  R  E     P PD     Y ++L+  A   S+ D       ++ +DV  
Sbjct: 75  ICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEV 134

Query: 135 -APVVYNYTYLLKVCGDVGEIRR-------GKEIHGQLIVNGF--------SLDLFAMTG 178
              +     ++   CGD+ E RR        K     L++NG+        SL LF    
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
            + +     ++E A K+FD + +RD++SWN++++G+  NG +E  LDL  +M   G   D
Sbjct: 195 ELGIR----RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTD 250

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T+VS++   +N G L +G+A+HGYA++A F   + ++  L+DMY+K G + +A  VF+
Sbjct: 251 LATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFE 310

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+VVSW SMIA Y   G  + ++R+F +M  +G+ P   TI   LHACA  G LE 
Sbjct: 311 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN 370

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  VH  + + K+ +D+ ++N+L+ MY+KC  +  A  +FS++Q K +VSWN MI GY++
Sbjct: 371 GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK 430

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           N   NEALN F +M+  N KP+S TM  ++PA A L+ +   + IH  ++R+ F  +  V
Sbjct: 431 NSLPNEALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV 489

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             AL+DMY KCGA+G AR LFDM+ E+ + +W VMI GYG HG G  A+  FN+M     
Sbjct: 490 ANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 549

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P++++F+  + ACSHSGL++EG  +F  ++ +  IEP  +HY  +VDLL RAG L++A+
Sbjct: 550 EPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAY 609

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            FI+ MPIEP  T++GA+L  C+I+ +V+L EK A  +FEL+P+  GY+VLLANIYA A 
Sbjct: 610 KFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAE 669

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W+++ K+R  + ++GL+K PGCS +E+K +VH F +G + HP + +I   L+     +K
Sbjct: 670 KWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMK 729

Query: 719 AAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             G+ P    ++   +D  +E  L  HSEK+A+AFG+L+  PG T+ + KNLRVCGDCH 
Sbjct: 730 EEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHE 789

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K++S +  R+II+RD +RFH FK+G CSC  +W
Sbjct: 790 MAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 256/526 (48%), Gaps = 57/526 (10%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C  LK +   RRI  +I  + +    +  +KLV ++     L +  R+F+ + ++ 
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMR-------------YDDVAPV------------ 137
             L++ ++ GYAK  +  +++S   RMR             +D++               
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 138 -----------VYNYTYLLKV-------------CGDVGEIRRGKEIHGQLIVNGFSLDL 173
                      ++    LL +             C + G +  G+ +HG  I   F  +L
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKEL 286

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                +++MY+K G +  A ++F+ M ER +VSW +++AG+A+ G +++++ L   M +E
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 346

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   D  TI +IL A A  G L  GK VH Y       S + VS AL+DMYAKCG +  A
Sbjct: 347 GISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDA 406

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             VF  M+ +++VSWN+MI  Y +   P EA+ +F +M     +P ++T+   L ACA L
Sbjct: 407 HSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASL 465

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             LERG  +H  + +     D  + N+L+ MY KC  +  A  +F  +  K LVSW  MI
Sbjct: 466 AALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMI 525

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS--C 471
            GY  +G  +EA+  F +MR+  I+PD  + +S++ A +   ++    W    ++R+  C
Sbjct: 526 AGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG-WGFFNMMRNNCC 584

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
            E        ++D+ A+ G +  A     MM  E   T W  ++ G
Sbjct: 585 IEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/712 (40%), Positives = 436/712 (61%), Gaps = 3/712 (0%)

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
           A++  ++  Y K     DA      MR  D     +    +LK C  +     G+E+HG 
Sbjct: 90  AIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGF 149

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++ NGF  D+F    ++ MY++ G +  A  +FD++  +D+VSW+T++  + ++G  + A
Sbjct: 150 VVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEA 209

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG--FDSIVNVSTALV 281
           LDL+  MH    +   I ++SI   +A +  L++GKA+H Y MR G    S V + TAL+
Sbjct: 210 LDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALI 269

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KC  +  AR VFDG+   +++SW +MIAAY+   N  E +R+F KML +G+ P  +
Sbjct: 270 DMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEI 329

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  +  C   G LE G  +H    +      + +  + I MY KC  V  A  +F   
Sbjct: 330 TMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF 389

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + K L+ W+AMI  YAQN  ++EA + F  M    I+P+  TMVS++   A+   +   K
Sbjct: 390 KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGK 449

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           WIH+ + +   + ++ + T+ +DMYA CG + TA  LF    +R ++ WN MI G+  HG
Sbjct: 450 WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHG 509

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G+AA+ELF +M      PNDITF+ A+ ACSHSGL++EG   F  +  ++G  P ++HY
Sbjct: 510 HGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHY 569

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDLLGRAG L+EA + I+ MP+ P I VFG+ L ACK+HKN++LGE AA +   L+P
Sbjct: 570 GCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEP 629

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
            + GY+VL++NIYA+A+ W  +A +R  M+ +G+ K PG S +E+   +H F  G  +HP
Sbjct: 630 HKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHP 689

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            +K++Y  ++ + ++++ AGY PD + + H+++   + + L+ HSEKLA+A+GL++++PG
Sbjct: 690 DAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPG 749

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLRVC DCHNATK +S + GREIIVRD +RFH FK G CSC DYW
Sbjct: 750 VPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 226/447 (50%), Gaps = 3/447 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K+G          L+ ++ +  SL+ A  +F+ I +K    + TM++ Y +   LD+
Sbjct: 149 FVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDE 208

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG--FSLDLFAMTGV 179
           A+  L  M    V P       +  V  ++ +++ GK +H  ++ NG      +   T +
Sbjct: 209 ALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTAL 268

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           ++MY KC  +  A ++FD + +  ++SW  ++A +         + L  +M  EG   + 
Sbjct: 269 IDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNE 328

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           IT++S++      G+L +GK +H + +R GF   + ++TA +DMY KCG V +AR VFD 
Sbjct: 329 ITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDS 388

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
            KS++++ W++MI++Y +    +EA  IF  M   G+ P   T++  L  CA  G LE G
Sbjct: 389 FKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            ++H  +D+  +  D+ +  S + MY+ C  +D A  +F++   + +  WNAMI G+A +
Sbjct: 449 KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMH 508

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFV 478
           G    AL  F +M +  + P+  T +  + A +   +++  K + H +V    F   V  
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEH 568

Query: 479 MTALIDMYAKCGAVGTARALFDMMNER 505
              ++D+  + G +  A  L   M  R
Sbjct: 569 YGCMVDLLGRAGLLDEAHELIKSMPMR 595



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 186/370 (50%), Gaps = 3/370 (0%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQH--LFQTKLVSLFCKYNSLSDAA 92
           PS I       +L     LK  + +   ++++G C +      T L+ ++ K  +L+ A 
Sbjct: 223 PSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYAR 282

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           RVF+ +       +  M+  Y    +L++ V   ++M  + + P       L+K CG  G
Sbjct: 283 RVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAG 342

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  GK +H   + NGF+L L   T  ++MY KCG +  A  +FD    +DL+ W+ +++
Sbjct: 343 ALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMIS 402

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            +AQN   + A D+   M   G R +  T+VS+L   A  GSL +GK +H Y  + G   
Sbjct: 403 SYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKG 462

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + + T+ VDMYA CG ++TA  +F     R++  WN+MI+ +   G+ E A+ +F++M 
Sbjct: 463 DMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEME 522

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
             GV P ++T + ALHAC+  G L+ G    HK++ +      V     ++ +  +   +
Sbjct: 523 ALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLL 582

Query: 392 DRAADIFSKL 401
           D A ++   +
Sbjct: 583 DEAHELIKSM 592



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 7/300 (2%)

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           S N    + +I +Y++   P +A +I+  M     E  N  I   L AC  +     G  
Sbjct: 86  SSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQE 145

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  + +     DV + N+LI MYS+   +  A  +F K++ K +VSW+ MI  Y ++G 
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS--CFEKNVFVM 479
           ++EAL+    M    +KP    M+S+   LAEL+ ++  K +HA V+R+  C +  V + 
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC 265

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TALIDMY KC  +  AR +FD +++  + +W  MI  Y         V LF KML     
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           PN+IT L  +  C  +G +E G  +H FT L+  + +  V+    A +D+ G+ G +  A
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFT-LRNGFTLSLVLA--TAFIDMYGKCGDVRSA 382


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 306/761 (40%), Positives = 455/761 (59%), Gaps = 54/761 (7%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ +++   K   LDD + F  +M+     P  Y + ++LK CG++  +R G  +H  + 
Sbjct: 95  WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQNGFAEL 222
            NG   ++F    +V MY +CG +++A++MFD + ER   D+VSWN+I+A + Q G +  
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214

Query: 223 ALDLVTRM---HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           AL +  RM   +    R D IT+V+ILPA A+V +L+ GK VHG+++R G    V V  A
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSM---------------------------- 311
           LV MYAKC ++  A  VF+G+K ++VVSWN+M                            
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334

Query: 312 -------IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
                  IA Y + G+  EA+ +F++M   G+EP  VT+   L  CA +G L  G   H 
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394

Query: 365 LLDQLKLG-------TDVSMTNSLISMYSKCKKVDRAADIFSKLQGK--TLVSWNAMILG 415
            + +  L         D+ + N LI MY+KCK    A  IF  ++GK   +V+W  MI G
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454

Query: 416 YAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           YAQ+G  N+AL  F ++  +  ++KP++FT+   + A A L  +R  + +HA  +R+  E
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514

Query: 474 KNV-FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             V +V   LIDMY+K G +  ARA+FD M  R+V +W  ++ GYG HG G+ A+ LF++
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M +     + ITFL  + ACSHSG+V++G+ YF  + K +GI P  +HY  MVDLLGRAG
Sbjct: 575 MQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAG 634

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           RLNEA + I+ M +EP   V+ A+L A +IH N+ELGE AA++L EL  +  G + LL+N
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSN 694

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           +YA A  W  +A++R++M+  G++K PGCS ++ K    +F+ G   HP+S++IY  L  
Sbjct: 695 LYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLD 754

Query: 713 LIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           LI  IK  GYVP T+ ++HDV+D  + +LL  HSEKLA+A+G+L ++PG  I I KNLR+
Sbjct: 755 LIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRI 814

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCH+A  YIS++   EI++RD  RFH FK G CSC  YW
Sbjct: 815 CGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 52/420 (12%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C S   L+  +++    +++GL D       LVS++ K + +++A +VFE I  K 
Sbjct: 240 ILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKD 299

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--------------------------- 135
              ++ M+ GY++  S D A+S    M+ +D+                            
Sbjct: 300 VVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFR 359

Query: 136 --------PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-------DLFAMTGVV 180
                   P V     LL  C  VG +  GK+ H  +I N  +L       DL  + G++
Sbjct: 360 QMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLI 419

Query: 181 NMYAKCGQIEEAYKMFDRMPERD--LVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRR 236
           +MYAKC     A  +FD +  +D  +V+W  ++ G+AQ+G A  AL L  ++ ++    +
Sbjct: 420 DMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLK 479

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNVSTALVDMYAKCGRVETARL 295
            +  T+   L A A +G LR+G+ +H YA+R   +S ++ V   L+DMY+K G ++ AR 
Sbjct: 480 PNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARA 539

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VFD MK RNVVSW S++  Y   G  EEA+ +F +M   G     +T +  L+AC+  G 
Sbjct: 540 VFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGM 599

Query: 356 LERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMI 413
           +++G I+ H ++    +         ++ +  +  +++ A ++   +  + T V W A++
Sbjct: 600 VDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALL 659



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 25/273 (9%)

Query: 338 PTNVTIMEALHACADLGDLE---RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           P  + ++  L  C  L + +   + IFVH   +         M +  +  Y +C     A
Sbjct: 28  PPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE---------MFSYAVGAYIECGASAEA 78

Query: 395 ADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
             +  +L     T+  WNA+I    + G +++ L ++C+M+     PD +T   V+ A  
Sbjct: 79  VSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACG 138

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH---VTT 509
           E+  +R+   +HA+V  +    NVF+  +++ MY +CGA+  A  +FD + ER    + +
Sbjct: 139 EIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVS 198

Query: 510 WNVMIDGYGTHGLGKAAVELFNKM---LEGPTKPNDITFLCAISACSHSGLVEEG--IHY 564
           WN ++  Y   G  + A+ +  +M        +P+ IT +  + AC+    ++ G  +H 
Sbjct: 199 WNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHG 258

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           F+      G+   +    A+V +  +  ++NEA
Sbjct: 259 FSVRN---GLVDDVFVGNALVSMYAKCSKMNEA 288


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  583 bits (1504), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/771 (38%), Positives = 464/771 (60%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C+ +K+LR   ++  +++ SG          LV ++ K +   D+ R+F+ IP++ 
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ +   Y +     +AV     M    + P  ++ + ++  C  + +  RGK IHG
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            LI  G+  D F+   +V+MYAK G + +A  +F+++ + D+VSWN ++AG   +   E 
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL+L+ +M   G   +  T+ S L A A +G   +G+ +H   M+   +S + VS  LVD
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KC  +E AR+ F+ +  +++++WN++I+ Y +     EA+ +F +M  +G+     T
Sbjct: 403 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L + A L  +     VH L  +    +D+ + NSLI  Y KC  V+ A  IF +  
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 522

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
              LVS+ +MI  YAQ G+  EAL  F +M+   +KPD F   S++ A A LS     K 
Sbjct: 523 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 582

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  +++  F  ++F   +L++MYAKCG++  A   F  + ER + +W+ MI G   HG 
Sbjct: 583 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 642

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A++LFN+ML+    PN IT +  + AC+H+GLV E   YF S+++ +G +P+ +HY 
Sbjct: 643 GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYA 702

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DLLGRAG++NEA + + KMP E   +V+GA+LGA +IHK+VELG +AA  LF L+P+
Sbjct: 703 CMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 762

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G HVLLANIYA+A  W+ +A+VR +M    ++K PG S +E+K++V++F  G   H +
Sbjct: 763 KSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYR 822

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S+ IY  L+ L D +  AGYVP     +HDVE   +E LL  HSEKLA+AFGL+ +  G+
Sbjct: 823 SQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGA 882

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I ++KNLRVC DCH A KYI  +  REIIVRD++RFH FK+G CSCGDYW
Sbjct: 883 PIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 181/620 (29%), Positives = 327/620 (52%), Gaps = 15/620 (2%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C + K LR  L +   I KSGL D    +  L++L+ K  +   A ++ +   +  
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD 121

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GYA+      A+     M    V    + ++ +LK C  V ++R GK++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++V+GF  D+F    +V MYAKC +  ++ ++FD +PER++VSWN + + + Q  F   
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L   M   G + +  ++ S++ A   +     GK +HGY ++ G+D     + ALVD
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  A  VF+ +K  ++VSWN++IA  V   + E+A+ +  +M   G+ P   T
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFT 361

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  AL ACA +G  E G  +H  L ++ + +D+ ++  L+ MYSKC  ++ A   F+ L 
Sbjct: 362 LSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K L++WNA+I GY+Q     EAL+ F +M  + I  +  T+ +++ + A L V+   + 
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H L ++S F  +++V+ +LID Y KC  V  A  +F+      + ++  MI  Y  +G 
Sbjct: 482 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 541

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A++LF +M +   KP+       ++AC++    E+G      + K YG   V+D + 
Sbjct: 542 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YGF--VLDIFA 598

Query: 583 --AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE-- 638
             ++V++  + G +++A     ++  E GI  + AM+G    H +     +  N++ +  
Sbjct: 599 GNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEG 657

Query: 639 LDPDEGGYHVLLANIYAAAS 658
           + P+    H+ L ++  A +
Sbjct: 658 VSPN----HITLVSVLGACN 673



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 291/618 (47%), Gaps = 48/618 (7%)

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+P P         +++   +F+      + L  +   +  P   +Y+ LL  C     +
Sbjct: 21  FKPAP--------KLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSL 72

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R G +IH  +  +G S D      ++N+Y+KC     A K+ D   E DLVSW+ +++G+
Sbjct: 73  RPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGY 132

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           AQNG    AL     MH  G + +  T  S+L A + V  LRIGK VHG  + +GF+  V
Sbjct: 133 AQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV 192

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V+  LV MYAKC     ++ +FD +  RNVVSWN++ + YV+     EA+ +F +M+  
Sbjct: 193 FVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLS 252

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G++P   ++   ++AC  L D  RG  +H  L +L    D    N+L+ MY+K   +  A
Sbjct: 253 GIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F K++   +VSWNA+I G   +    +AL    +M+   I P+ FT+ S + A A +
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGM 372

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
            +    + +H+ +++   E ++FV   L+DMY+KC  +  AR  F+++ E+ +  WN +I
Sbjct: 373 GLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAII 432

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITF---------LCAISACS--HSGLVEEGIH 563
            GY  +     A+ LF +M +     N  T          L  +  C   H   V+ G H
Sbjct: 433 SGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH 492

Query: 564 ----YFTSLKKDYG-------IEPVMDH--------YGAMVDLLGRAGRLNEAWDF---I 601
                  SL   YG        E + +         + +M+    + G+  EA      +
Sbjct: 493 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM 552

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL----FELDPDEGGYHVLLANIYAAA 657
           Q M ++P   V  ++L AC      E G++    +    F LD   G     L N+YA  
Sbjct: 553 QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS---LVNMYAKC 609

Query: 658 SMWDKLAKVRTIMEKKGL 675
              D   +  + + ++G+
Sbjct: 610 GSIDDAGRAFSELTERGI 627


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 291/771 (37%), Positives = 445/771 (57%), Gaps = 4/771 (0%)

Query: 46   LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L  C++ K L   + I   I + G          L+S++ +   L  A  +F  +P + 
Sbjct: 336  ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
               ++ ++ GYA+     +A+    +M+ + V P    + +LL  C +      GK IH 
Sbjct: 396  LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             ++ +G   +      ++NMY +CG + EA  +F+    RD++SWN+++AG AQ+G  E 
Sbjct: 456  DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            A  L   M  E    D IT  S+L    N  +L +GK +HG    +G    VN+  AL++
Sbjct: 516  AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MY +CG ++ AR VF  ++ R+V+SW +MI    + G   +A+ +F +M ++G  P   T
Sbjct: 576  MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKST 635

Query: 343  IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
                L  C     L+ G  V   +       D  + N+LIS YSK   +  A ++F K+ 
Sbjct: 636  FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695

Query: 403  GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
             + +VSWN +I GYAQNG    A+ +  +M+ +++ P+ F+ VS++ A +  S +   K 
Sbjct: 696  SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKR 755

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +HA +++   + +V V  ALI MYAKCG+ G A+ +FD + E++V TWN MI+ Y  HGL
Sbjct: 756  VHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGL 815

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
               A+  FN M +   KP+  TF   +SAC+H+GLV EG   F+S++ +YG+ P ++HYG
Sbjct: 816  ASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYG 875

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             +V LLGRA R  EA   I +MP  P   V+  +LGAC+IH N+ L E AAN   +L+  
Sbjct: 876  CLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNAR 935

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
                ++LL+N+YAAA  WD +AK+R +ME +G++K PG S +E+ N +H F +    HP+
Sbjct: 936  NPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 995

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            +  IY  L+ L  E++ AGY PDT  + HD+    QE  L +HSE+LAIA+GL+ + PG+
Sbjct: 996  TAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGT 1055

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLR+CGDCH A+K+IS + GREII RD +RFH FKNG CSC DYW
Sbjct: 1056 PIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 184/573 (32%), Positives = 304/573 (53%), Gaps = 6/573 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E +RI  L ++ GL       T LV++  +   +  A + F+   D+   +Y+ ++  
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAA 304

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
            A+     +A     RMR D VA     Y  +L  C     +  GK IH  +  +G S D
Sbjct: 305 LAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD 364

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +     +++MYA+CG + +A ++F  MP+RDL+SWN I+AG+A+      A+ L  +M  
Sbjct: 365 VQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG +   +T + +L A AN  +   GK +H   +R+G  S  +++ AL++MY +CG +  
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VF+G ++R+V+SWNSMIA + + G+ E A ++FQ+M ++ +EP N+T    L  C +
Sbjct: 485 AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN 544

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
              LE G  +H  + +  L  DV++ N+LI+MY +C  +  A ++F  LQ + ++SW AM
Sbjct: 545 PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAM 604

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I G A  G   +A+  F +M+++  +P   T  S++      + +   K + A ++ S +
Sbjct: 605 IGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY 664

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E +  V  ALI  Y+K G++  AR +FD M  R + +WN +I GY  +GLG+ AVE   +
Sbjct: 665 ELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQ 724

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           M E    PN  +F+  ++ACS    +EEG  +H     +K  G   V     +M    G 
Sbjct: 725 MQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGS 784

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            G   E +D I    IE  +  + AM+ A   H
Sbjct: 785 QGEAQEVFDNI----IEKNVVTWNAMINAYAQH 813



 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 173/589 (29%), Positives = 305/589 (51%), Gaps = 5/589 (0%)

Query: 35  PSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P+   R     LL+ CT    L E +RI   ++++ +         L++++ K  S+ DA
Sbjct: 22  PTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDA 81

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ +P +    +++++  YA+      A      M+     P    Y  +L  C   
Sbjct: 82  HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E+  GK+IH Q+I  G+  D      +++MY KCG +  A ++F  +  RD+VS+NT++
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
             +AQ  + +  L L  +M  EG   D +T +++L A      L  GK +H   +  G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S + V TALV M  +CG V++A+  F G   R+VV +N++IAA  + G+  EA   + +M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              GV     T +  L+AC+    LE G  +H  + +    +DV + N+LISMY++C  +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
            +A ++F  +  + L+SWNA+I GYA+     EA+  + +M+S+ +KP   T + ++ A 
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A  S     K IH  ++RS  + N  +  AL++MY +CG++  A+ +F+    R V +WN
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI G+  HG  + A +LF +M     +P++ITF   +S C +   +E G      + + 
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            G++  ++   A++++  R G L +A +    +     +  + AM+G C
Sbjct: 562 -GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/772 (39%), Positives = 482/772 (62%), Gaps = 12/772 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L   C ++   +++  L++  G     +  TKL++L+  +  +S +   F+ I  K    
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRY----DDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           +++++  Y +F    +A++ + ++        + P  Y +  +LK C  + +   GK++H
Sbjct: 88  WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +   GF  D+F    +V++Y++ G ++ A+K+F  MP +D+ SWN +++GF QNG A 
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL ++ RM  EG + D IT+ SILP  A    +  G  +H + ++ G DS V VS AL+
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +MY+K GR++ A++VFD M+ R++VSWNS+IAAY +  +P  A+R F+ M   G+ P  +
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324

Query: 342 TIMEALHACADLGD--LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           T++      + L D  + R I    ++ +  L  DV + N+L++MY+K   ++ A  +F 
Sbjct: 325 TVVSLTSIFSQLSDQRISRSILGF-VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIR 458
           +L  K  +SWN ++ GY QNG  +EA++ +  M   ++  P+  T VS+IPA + +  ++
Sbjct: 384 QLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
               IHA +I++    +VFV T LID+Y KCG +  A +LF  +       WN +I   G
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLG 503

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A++LF  ML    K + ITF+  +SACSHSGLV+EG   F  ++K+YGI+P +
Sbjct: 504 IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSL 563

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HYG MVDLLGRAG L +A++ ++ MPI+P  +++GA+L ACKI+ N ELG  A++RL E
Sbjct: 564 KHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLE 623

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           +D +  GY+VLL+NIYA    W+ + KVR++   +GL+KTPG S V + ++   FY+G+ 
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQ 683

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+   IY  L+ L  ++K+ GYVPD + ++ D+E+  +E +L+SHSE+LAIAFG++++
Sbjct: 684 THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST 743

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
            P S I I KNLRVCGDCHNATKYIS ++ REI+VRD +RFH FK+G+CSC 
Sbjct: 744 PPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/738 (39%), Positives = 436/738 (59%), Gaps = 5/738 (0%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            L+S++ +   L  A  +F  +P +    ++ ++ GYA+     +A+    +M+ + V P 
Sbjct: 426  LISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPG 485

Query: 138  VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               + +LL  C +      GK IH  ++ +G   +      ++NMY +CG I EA  +F+
Sbjct: 486  RVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE 545

Query: 198  RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
                RD++SWN+++AG AQ+G  E A  L   M +EG   D IT  S+L    N  +L +
Sbjct: 546  GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605

Query: 258  GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            G+ +H   + +G    VN+  AL++MY +CG ++ A  VF  ++ RNV+SW +MI  + +
Sbjct: 606  GRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFAD 665

Query: 318  GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTDV 375
             G   +A  +F +M + G +P   T    L AC     L+ G  +  H L    +L T V
Sbjct: 666  QGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGV 725

Query: 376  SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
               N+LIS YSK   +  A  +F K+  + ++SWN MI GYAQNG    AL +  +M+ +
Sbjct: 726  G--NALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQ 783

Query: 436  NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             +  + F+ VS++ A +  S +   K +HA +++   + +V V  ALI MYAKCG++  A
Sbjct: 784  GVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEA 843

Query: 496  RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
            + +FD   E++V TWN MI+ Y  HGL   A++ FN M +   KP+  TF   +SAC+HS
Sbjct: 844  QEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHS 903

Query: 556  GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
            GLV EG   F+SL+  +G+ P ++HYG +V LLGRAGR  EA   I +MP  P   V+  
Sbjct: 904  GLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWET 963

Query: 616  MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
            +LGAC+IH NV L E AAN   +L+      +VLL+N+YAAA  WD +AK+R +ME +G+
Sbjct: 964  LLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGI 1023

Query: 676  QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
            +K PG S +E+ N +H F +    HP++  IY  L+ L  E++ AGY PDT  + H+++ 
Sbjct: 1024 RKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDK 1083

Query: 735  YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
              QE  L +HSE+LAIA+GLL + PG+ I I KNLR+CGDCH A+K+IS + GREII RD
Sbjct: 1084 EHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARD 1143

Query: 795  MHRFHCFKNGVCSCGDYW 812
             +RFH FKNG CSC D+W
Sbjct: 1144 SNRFHTFKNGKCSCEDFW 1161



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 176/573 (30%), Positives = 299/573 (52%), Gaps = 6/573 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E +RI  L +  GL       T L ++F +   ++ A +  E   D+   +Y+ ++  
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
            A+    ++A     +MR D V      Y  +L  C     +  G+ IH  +   G S D
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSD 419

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +     +++MYA+CG +  A ++F+ MP+RDL+SWN I+AG+A+      A+ L  +M  
Sbjct: 420 VQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS 479

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG +   +T + +L A  N  +   GK +H   +R+G  S  +++ AL++MY +CG +  
Sbjct: 480 EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VF+G ++R+++SWNSMIA + + G+ E A ++F +M  +G+EP  +T    L  C +
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
              LE G  +H L+ +  L  DV++ N+LI+MY +C  +  A ++F  L+ + ++SW AM
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAM 659

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I G+A  G   +A   F +M++   KP   T  S++ A    + +   K + A ++ S +
Sbjct: 660 IGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY 719

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E +  V  ALI  Y+K G++  AR +FD M  R + +WN MI GY  +GLG  A++   +
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQ 779

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           M E     N  +F+  ++ACS    +EEG  +H     +K  G   V     A++ +  +
Sbjct: 780 MQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVG---AALISMYAK 836

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            G L EA +       E  +  + AM+ A   H
Sbjct: 837 CGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQH 868



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/619 (29%), Positives = 320/619 (51%), Gaps = 16/619 (2%)

Query: 13  TNSTPTQTLHEHKHTLSQR-----AYIPSRIYRHPSAL--LLEVCT---SLKELRRILPL 62
           +N    + + + +H  S+R     AY P     + +A   L++ CT   SL E +RI   
Sbjct: 48  SNLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQ 107

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++++G+         L++++ K  S+SDA +VF  +P +    +++++  YA+      A
Sbjct: 108 MVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKA 167

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
                 M+     P    Y  +L  C    E+  GK+IH ++I  G+  D      ++NM
Sbjct: 168 FQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNM 227

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y KC  +  A ++F  +  RD+VS+NT++  +AQ  + E  + L  +M  EG   D +T 
Sbjct: 228 YGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTY 287

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +++L A      L  GK +H  A+  G +S + V TAL  M+ +CG V  A+   +    
Sbjct: 288 INLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R+VV +N++IAA  + G+ EEA   + +M   GV     T +  L+AC+    L  G  +
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELI 407

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + ++   +DV + NSLISMY++C  + RA ++F+ +  + L+SWNA+I GYA+    
Sbjct: 408 HSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR 467

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EA+  + +M+S+ +KP   T + ++ A    S     K IH  ++RS  + N  +  AL
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           ++MY +CG++  A+ +F+    R + +WN MI G+  HG  +AA +LF +M +   +P+ 
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587

Query: 543 ITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           ITF   +  C +   +E G  IH    L  + G++  ++   A++++  R G L +A++ 
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHM---LIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644

Query: 601 IQKMPIEPGITVFGAMLGA 619
              +     +  + AM+G 
Sbjct: 645 FHSLR-HRNVMSWTAMIGG 662



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 294/578 (50%), Gaps = 9/578 (1%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSL 88
            +IPS+I       +L  C S  EL   ++I   II++G       Q  L++++ K   L
Sbjct: 178 GFIPSKI---TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDL 234

Query: 89  SDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
             A +VF  I  +    Y+TML  YA+ A +++ +    +M  + + P    Y  LL   
Sbjct: 235 PSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAF 294

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
                +  GK IH   +  G + D+   T +  M+ +CG +  A +  +   +RD+V +N
Sbjct: 295 TTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYN 354

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++A  AQ+G  E A +   +M  +G   +  T +S+L A +   +L  G+ +H +    
Sbjct: 355 ALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G  S V +  +L+ MYA+CG +  AR +F+ M  R+++SWN++IA Y    +  EAM+++
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLY 474

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           ++M  +GV+P  VT +  L AC +      G  +H+ + +  + ++  + N+L++MY +C
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC 534

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             +  A ++F   + + ++SWN+MI G+AQ+G    A   F +M+ + ++PD  T  SV+
Sbjct: 535 GSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVL 594

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
                   +   + IH L+I S  + +V +  ALI+MY +CG++  A  +F  +  R+V 
Sbjct: 595 VGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVM 654

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS- 567
           +W  MI G+   G  + A ELF +M     KP   TF   + AC  S  ++EG       
Sbjct: 655 SWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHI 714

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L   Y ++  + +  A++    ++G + +A     KMP
Sbjct: 715 LNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP 750



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 242/481 (50%), Gaps = 5/481 (1%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  CT   +  + + I   I++SG+         L++++ +  S+ +A  VFE    + 
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++M+ G+A+  S + A    + M+ + + P    +  +L  C +   +  G++IH 
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I +G  LD+     ++NMY +CG +++AY++F  +  R+++SW  ++ GFA  G    
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A +L  +M  +G +    T  SIL A  +   L  GK V  + + +G++    V  AL+ 
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALIS 731

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y+K G +  AR VFD M +R+++SWN MIA Y + G    A++   +M +QGV     +
Sbjct: 732 AYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L+AC+    LE G  VH  + + K+  DV +  +LISMY+KC  ++ A ++F    
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT 851

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +V+WNAMI  YAQ+G  ++AL++F  M  + IKPD  T  S++ A     ++     
Sbjct: 852 EKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNR 911

Query: 463 I-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           I  +L  +      +     L+ +  + G    A  L + M        W  ++     H
Sbjct: 912 IFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIH 971

Query: 521 G 521
           G
Sbjct: 972 G 972


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/732 (41%), Positives = 451/732 (61%), Gaps = 6/732 (0%)

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            L+ A +VF+ IP      Y+ +++ Y+       A+     M    VAP  Y + ++LK
Sbjct: 49  QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C  + ++R G+ IH      G   DLF  T ++++Y +C +   A  +F +MP RD+V+
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVA 168

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEG-RRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           WN ++AG+A +G    A+  +  M + G  R +  T+VS+LP +A  G+L  G ++H Y 
Sbjct: 169 WNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYC 228

Query: 266 MRAGFDS---IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           +RA  +     V + TAL+DMYAKC ++  A  VF GM  RN V+W+++I  +V      
Sbjct: 229 LRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMT 288

Query: 323 EAMRIFQKMLDQGVEPTNVT-IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EA  +F+ ML +G+   + T +  AL  CA L DL  G  +H L+ +  +  D++ +NSL
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           +SMY+K   ++ A   F ++  K  +S+ A++ G  QNG+  EA   F KM++ N++PD 
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            TMVS+IPA + L+ +++ K  H  VI         +  +LIDMYAKCG +  +R +FD 
Sbjct: 409 ATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  R V +WN MI GYG HGLGK A  LF  M      P+D+TF+C I+ACSHSGLV EG
Sbjct: 469 MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            H+F ++   YGI P M+HY  MVDLL R G L+EA+ FIQ MP++  + V+GA+LGAC+
Sbjct: 529 KHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IHKN++LG++ +  + +L P+  G  VLL+NI++AA  +D+ A+VR I + KG +K+PG 
Sbjct: 589 IHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGY 648

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E+   +H+F  G   HP S+ IY  L+ ++ +IK  GY  DT+ +  D+E+  +E  
Sbjct: 649 SWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKA 708

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLAIAFG+L+ +   TI + KNLRVCGDCH A KY++LV  R IIVRD +RFH 
Sbjct: 709 LLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHH 768

Query: 801 FKNGVCSCGDYW 812
           FKNG CSCG++W
Sbjct: 769 FKNGQCSCGNFW 780



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 229/476 (48%), Gaps = 17/476 (3%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           GQ+  A ++FDR+P  D  ++N ++  ++  G    A+DL   M       +  T   +L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A + +  LR G+ +H +A  AG  + + VSTAL+D+Y +C R   AR VF  M  R+VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +WN+M+A Y   G    A+     M D  G+ P   T++  L   A  G L +G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 366 LDQLKLGTD---VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             +  L  +   V +  +L+ MY+KCK++  A  +F  +  +  V+W+A+I G+    R+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 423 NEALNYFCKMRSKNIKPDSFTMV-SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            EA N F  M  + +   S T V S +   A L+ +     +HAL+ +S    ++    +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+ MYAK G +  A   FD +  +   ++  ++ G   +G  + A  +F KM     +P+
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 542 DITFLCAISACSHSGLVEEG-IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
             T +  I ACSH   ++ G   + + + +   +E  +    +++D+  + G+++ +   
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQV 465

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----PDEGGYHVLLA 651
             KMP    +  +  M+    IH    LG++A      +      PD+  +  L+A
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIHG---LGKEATTLFLGMKNQGFAPDDVTFICLIA 517



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 16/302 (5%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L VC SL +L    ++  LI KSG+         L+S++ K   +++A   F+ I  K  
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDT 373

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  +L G  +    ++A     +M+  ++ P +     L+  C  +  ++ GK  HG 
Sbjct: 374 ISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G +L+      +++MYAKCG+I+ + ++FD+MP RD+VSWNT++AG+  +G  + A
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVST 278
             L   M  +G   D +T + ++ A ++ G +  GK       H Y +    +  +    
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI---- 549

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGN---PEEAMRIFQKMLDQ 334
            +VD+ A+ G ++ A      M  + +V  W +++ A     N    ++  RI QK+  +
Sbjct: 550 CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPE 609

Query: 335 GV 336
           G 
Sbjct: 610 GT 611


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/732 (41%), Positives = 451/732 (61%), Gaps = 6/732 (0%)

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            L+ A +VF+ IP      Y+ +++ Y+       A+     M    VAP  Y + ++LK
Sbjct: 49  QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C  + ++R G+ IH      G   DLF  T ++++Y +C +   A  +F +MP RD+V+
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVA 168

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           WN ++AG+A +G    A+  +  M + G  R +  T+VS+LP +A  G+L  G ++H Y 
Sbjct: 169 WNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYC 228

Query: 266 MRAGFDS---IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           +RA  +     V + TAL+DMYAKC ++  A  VF GM  RN V+W+++I  +V      
Sbjct: 229 LRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMT 288

Query: 323 EAMRIFQKMLDQGVEPTNVT-IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EA  +F+ ML +G+   + T +  AL  CA L DL  G  +H L+ +  +  D++ +NSL
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           +SMY+K   ++ A   F ++  K  +S+ A++ G  QNG+  EA   F KM++ N++PD 
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            TMVS+IPA + L+ +++ K  H  VI         +  +LIDMYAKCG +  +R +FD 
Sbjct: 409 ATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  R V +WN MI GYG HGLGK A  LF  M      P+D+TF+C I+ACSHSGLV EG
Sbjct: 469 MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            H+F ++   YGI P M+HY  MVDLL R G L+EA+ FIQ MP++  + V+GA+LGAC+
Sbjct: 529 KHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IHKN++LG++ +  + +L P+  G  VLL+NI++AA  +D+ A+VR I + KG +K+PG 
Sbjct: 589 IHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGY 648

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E+   +H+F  G   HP S+ IY  L+ ++ +IK  GY  DT+ +  D+E+  +E  
Sbjct: 649 SWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKA 708

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLAIAFG+L+ +   TI + KNLRVCGDCH A KY++LV  R IIVRD +RFH 
Sbjct: 709 LLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHH 768

Query: 801 FKNGVCSCGDYW 812
           FKNG CSCG++W
Sbjct: 769 FKNGQCSCGNFW 780



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 229/476 (48%), Gaps = 17/476 (3%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           GQ+  A ++FDR+P  D  ++N ++  ++  G    A+DL   M       +  T   +L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A + +  LR G+ +H +A  AG  + + VSTAL+D+Y +C R   AR VF  M  R+VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +WN+M+A Y   G    A+     M D  G+ P   T++  L   A  G L +G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 366 LDQLKLGTD---VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             +  L  +   V +  +L+ MY+KCK++  A  +F  +  +  V+W+A+I G+    R+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 423 NEALNYFCKMRSKNIKPDSFTMV-SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            EA N F  M  + +   S T V S +   A L+ +     +HAL+ +S    ++    +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+ MYAK G +  A   FD +  +   ++  ++ G   +G  + A  +F KM     +P+
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 542 DITFLCAISACSHSGLVEEG-IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
             T +  I ACSH   ++ G   + + + +   +E  +    +++D+  + G+++ +   
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQV 465

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----PDEGGYHVLLA 651
             KMP    +  +  M+    IH    LG++A      +      PD+  +  L+A
Sbjct: 466 FDKMPAR-DVVSWNTMIAGYGIHG---LGKEATTLFLGMKNQGFAPDDVTFICLIA 517



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 16/302 (5%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L VC SL +L    ++  LI KSG+         L+S++ K   +++A   F+ I  K  
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDT 373

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  +L G  +    ++A     +M+  ++ P +     L+  C  +  ++ GK  HG 
Sbjct: 374 ISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G +L+      +++MYAKCG+I+ + ++FD+MP RD+VSWNT++AG+  +G  + A
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVST 278
             L   M  +G   D +T + ++ A ++ G +  GK       H Y +    +  +    
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI---- 549

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGN---PEEAMRIFQKMLDQ 334
            +VD+ A+ G ++ A      M  + +V  W +++ A     N    ++  RI QK+  +
Sbjct: 550 CMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPE 609

Query: 335 GV 336
           G 
Sbjct: 610 GT 611


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/765 (38%), Positives = 450/765 (58%), Gaps = 6/765 (0%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           TS+  L +    II  G  +     TKL        ++  A  +F  +      L++ ++
Sbjct: 31  TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90

Query: 111 KGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +G++   S   ++S    +R   D+ P    Y + +       + R G+ IHGQ +V+G 
Sbjct: 91  RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG-FAELALDLVT 228
             +L   + +V MY K  ++E+A K+FDRMPE+D + WNT+++G+ +N  + E       
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            ++E   R D  T++ ILPAVA +  LR+G  +H  A + G  S   V T  + +Y+KCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           +++    +F   +  ++V++N+MI  Y   G  E ++ +F++++  G    + T++  + 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
                G L     +H    +    +  S++ +L ++YSK  +++ A  +F +   K+L S
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WNAMI GY QNG   +A++ F +M+     P+  T+  ++ A A+L  +   KW+H LV 
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            + FE +++V TALI MYAKCG++  AR LFD+M +++  TWN MI GYG HG G+ A+ 
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           +F +ML     P  +TFLC + ACSH+GLV+EG   F S+   YG EP + HY  MVD+L
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAG L  A  FI+ M IEPG +V+  +LGAC+IHK+  L    + +LFELDPD  GYHV
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+NI++A   + + A VR   +K+ L K PG +L+E+    H F SG   HPQ K IY 
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 687

Query: 709 FLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            LE L  +++ AGY P+T  ++HDVE+  +E ++  HSE+LAIAFGL+ + PG+ I I K
Sbjct: 688 KLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIK 747

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVC DCH  TK IS +T R I+VRD +RFH FK+GVCSCGDYW
Sbjct: 748 NLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/655 (43%), Positives = 418/655 (63%), Gaps = 2/655 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +I+ +L+V G     F +  +VN  +  G++  A K+FD+ P+ D+  WN IV  ++++G
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           F   A+++  RM       D  +   +L A + + +L +G+ VHG   R GF+S V V  
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            LV +YAKCG +  A  VF  +  R +VSW S+I+ Y + G P EA+RIF +M    V P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             + ++  L A  D+ DLE G  +H  + ++ L  +  +  SL S+Y+KC  V  A   F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           ++++  +L+ WNAMI GY +NG   EA+  F  M+SKNI+PDS T+ S I A A++  + 
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
            A+W+   +  S F  +V V T+LID YAKCG+V  AR +FD + ++ V  W+ M+ GYG
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ ++ LF+ M +    PND+TF+  ++AC +SGLVEEG   F  + +DYGIEP  
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRH 511

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  +VDLLGRAG L+ A++F+  MPIEPG++V+GA+L ACKIH++V LGE AA RLF 
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP   G++V L+N+YA++ +WD +AKVR +M +KGL K  G S++E+  ++ +F +G  
Sbjct: 572 LDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDK 631

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+SK I+  +E L   +K AG+VP T S+ HD+     E  L +HSE+LAIA+GL+++
Sbjct: 632 THPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLIST 691

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            PG+T+ I KNLR C +CH A K IS +  REI+VRD  RFH FK+G CSCGDYW
Sbjct: 692 PPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 269/515 (52%), Gaps = 8/515 (1%)

Query: 18  TQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTK 77
           T   + +K   ++  + P + Y    A L++       L +I   ++ +GL        K
Sbjct: 57  TTHFNNNKDDCNESTFKPDKFY----ASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAK 112

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+       +S A ++F+  PD    L++ +++ Y++      A+    RM+   V+P 
Sbjct: 113 LVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPD 172

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +++  +LK C  +  +  G+ +HGQ+  +GF  D+F   G+V +YAKCG+I  A  +F 
Sbjct: 173 GFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFG 232

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           R+ +R +VSW +I++G+AQNG    AL + + M +   R D+I +VS+L A  +V  L  
Sbjct: 233 RLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEH 292

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK++HG  ++ G +   ++  +L  +YAKCG V  ARL F+ +++ +++ WN+MI+ YV+
Sbjct: 293 GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVK 352

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  EEA+ +F+ M  + + P ++T+  ++ ACA +G LE   ++ + +   +   DV +
Sbjct: 353 NGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIV 412

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             SLI  Y+KC  VD A  +F ++  K +V W+AM++GY  +G+  E++  F  MR   +
Sbjct: 413 NTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV 472

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-R 496
            P+  T V ++ A     ++     +   +     E        ++D+  + G +  A  
Sbjct: 473 SPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYN 532

Query: 497 ALFDMMNERHVTTWNVMIDGYGTH---GLGKAAVE 528
            + +M  E  V+ W  ++     H    LG+ A E
Sbjct: 533 FVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAE 567


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/717 (39%), Positives = 439/717 (61%), Gaps = 45/717 (6%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L+ C  +  +R G ++H QL+VNG  +  F  + ++ +Y + G +E+A +MFD+M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++ SW  I+  +   G  E  + L   M  EG R D      +  A + + + R+GK 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           V+ Y +  GF+    V  +++DM+ KCGR++ AR  F+ ++ ++V  WN M++ Y   G 
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK-LGTDVSMTN 379
            ++A+ +F+KM+ +GV+P ++TI  A+ AC +L  L  G  +H    +++ L +D+ + N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 380 SLISMYSKCKKVDRA-------------------------------------------AD 396
           SL+  Y+KC+ V+ A                                             
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +FS+L  + +V WN++I   AQ+GR   AL+   +M   N++ ++ TMVS +PA ++L+ 
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +R  K IH  +IR   +   F++ +LIDMY +CG++  +R +FD+M +R + +WNVMI  
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           YG HG G  AV LF +      KPN ITF   +SACSHSGL+EEG  YF  +K +Y ++P
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++ Y  MVDLL RAG+ NE  +FI+KMP EP   V+G++LGAC+IH N +L E AA  L
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 552

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           FEL+P   G +VL+ANIY+AA  W+  AK+R +M+++G+ K PGCS +E+K ++HSF  G
Sbjct: 553 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 612

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
            T HP  ++I   +E+L  +IK  GYVPDTN +  DV++  +E  L  HSEK+A+AFGL+
Sbjct: 613 DTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI 672

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++ G+ + I KNLRVCGDCH+ATK+IS V  R+II+RD +RFH F +GVCSCGDYW
Sbjct: 673 STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/619 (24%), Positives = 281/619 (45%), Gaps = 91/619 (14%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C  L  LR   ++   ++ +G+       ++L+ ++C+   + DA R+F+ + +
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  +++ Y      ++ +     M  + V P  + +  + K C ++   R GK++
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           +  ++  GF  +      +++M+ KCG+++ A + F+ +  +D+  WN +V+G+   G  
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTA 279
           + AL++  +M  EG + + ITI S + A  N+  LR G+ +HGY ++    DS + V  +
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 253

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA--AYVEGGNPEEAMRIFQKM------ 331
           LVD YAKC  VE AR  F  +K  ++VSWN+M+A   + + G+ + A+  FQ+M      
Sbjct: 254 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSV 313

Query: 332 ----------------------------LD-------QGVEPTNVTIMEALHACADLGDL 356
                                       LD         VE   VT++ AL AC+ L  L
Sbjct: 314 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 373

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            +G  +H+ + +  L T   + NSLI MY +C  + ++  IF  +  + LVSWN MI  Y
Sbjct: 374 RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVY 433

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
             +G   +A+N F + R+  +KP+  T  +++ A +   +I    W +  ++     K  
Sbjct: 434 GMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG-WKYFKMM-----KTE 487

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           + M   ++ YA                         M+D     G     +E   KM   
Sbjct: 488 YAMDPAVEQYA------------------------CMVDLLSRAGQFNETLEFIEKM--- 520

Query: 537 PTKPNDITFLCAISAC---SHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAG 592
           P +PN   +   + AC    +  L E    Y       + +EP    +Y  M ++   AG
Sbjct: 521 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYL------FELEPQSSGNYVLMANIYSAAG 574

Query: 593 RLNEAWDFIQKMPIEPGIT 611
           R  +A   I+ +  E G+T
Sbjct: 575 RWEDAAK-IRCLMKERGVT 592


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/739 (38%), Positives = 456/739 (61%), Gaps = 5/739 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DV 134
           TKL      +++   A  +F  +P     L++ +++G++   S   ++S    +R + ++
Sbjct: 48  TKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNL 107

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           +P  + Y + +  C +   +     +H   I++G+  ++F  + +V++Y K  ++  A K
Sbjct: 108 SPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARK 164

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD MPERD V WNT++ G  +N   + ++ L   M  +G R D  T+ ++LPA A +  
Sbjct: 165 VFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQE 224

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L++G  +   A++ GF     V T L+ +Y+KCG V TARL+F  +   +++++N+MI+ 
Sbjct: 225 LKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISG 284

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           +   G  E ++++F+++L  G   ++ TI+  +   +  G L     +H    +  +  +
Sbjct: 285 FTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILN 344

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            +++ +  ++Y+K  ++D A  +F +   KT+V+WNAMI GY QNG    A++ F +M  
Sbjct: 345 PTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMK 404

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
               P++ T+ +++ A A+L  + + KW+H L+     E N++V TAL+DMYAKCG +  
Sbjct: 405 TEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISE 464

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  LFD M+E++  TWN MI GYG HG G  A++L+N+ML     P+ +TFL  + ACSH
Sbjct: 465 AWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSH 524

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GLV EG   F ++   Y IEP+++HY  MVD+LGR+G+L +A +FI+KMP+EPG  V+G
Sbjct: 525 AGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWG 584

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            +LGAC IHK+ ++   A+ RLFELDP   GY+VLL+NIY+    + K A +R +++K+ 
Sbjct: 585 TLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRK 644

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVE 733
           L K+PGC+L+E+    H F SG   H  +  IY  LE L  +++  GY  +T  ++HDVE
Sbjct: 645 LAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVE 704

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           +  +E  ++ HSEKLAIAFGL+ + PG+ I I KNLRVC DCH ATK+IS +T R I+VR
Sbjct: 705 EEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVR 764

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFH FK+G+CSCGDYW
Sbjct: 765 DANRFHHFKDGICSCGDYW 783



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 256/540 (47%), Gaps = 38/540 (7%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHL 73
           N +P+ ++  + H        P        A  +  C++ K L  +    I  G      
Sbjct: 88  NDSPSSSISLYTHLRRNTNLSPDNF---TYAFAVAACSNDKHLMLLHAHSIIDGYGSNVF 144

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV L+CK++ +  A +VF+ +P++   L++TM+ G  K    DD++     M  D 
Sbjct: 145 VGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADG 204

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V       T +L    ++ E++ G  I    +  GF    + +TG++++Y+KCG +  A 
Sbjct: 205 VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTAR 264

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +F R+   DL+++N +++GF  NG  E ++ L   +   G R    TIV ++P  +  G
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFG 324

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L +  ++HG+ +++G      VSTA   +Y K   ++ AR +FD    + VV+WN+MI+
Sbjct: 325 HLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G+ E A+ +F++M+     P  VTI   L ACA LG L  G +VH L+    L  
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEP 444

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           ++ ++ +L+ MY+KC  +  A  +F  +  K  V+WN MI GY  +G  +EAL  + +M 
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEML 504

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAV 492
                P + T +SV+ A +   ++   + I H +V       N + +  LI+ YA     
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMV-------NKYRIEPLIEHYA----- 552

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
                               M+D  G  G  + A+E   KM   P +P    +   + AC
Sbjct: 553 -------------------CMVDILGRSGQLEKALEFIKKM---PVEPGPAVWGTLLGAC 590



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 230/461 (49%), Gaps = 9/461 (1%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           + H Q I+NG+  DL  +T +            A  +F  +P+ D+  +N +V GF+ N 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 219 FAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
               ++ L T +        D  T    + A +N   L +   +H +++  G+ S V V 
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVG 146

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           +ALVD+Y K  RV  AR VFDGM  R+ V WN+MI   V+    ++++++F++M+  GV 
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             + T+   L A A+L +L+ G+ +  L  ++  G    +   LIS+YSKC  V+ A  +
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++    L+++NAMI G+  NG    ++  F ++     +  S T+V +IP  +    +
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
             A  IH   ++S    N  V TA   +Y K   +  AR LFD   E+ V  WN MI GY
Sbjct: 327 HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGY 386

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G  + A+ LF +M++    PN +T    +SAC+  G +  G  +   L K   +EP 
Sbjct: 387 TQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFG-KWVHHLIKSENLEPN 445

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT----VFG 614
           +    A+VD+  + G ++EAW     M  +  +T    +FG
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/753 (39%), Positives = 460/753 (61%), Gaps = 19/753 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+L+ K        +VF+ I ++    +++++     F   + A+     M  ++V P 
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198

Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    ++  C ++     +  GK++H   +  G  L+ F +  +V MY K G++  +  
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 257

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +      RDLV+WNT+++   QN     AL+ +  M  EG   D  TI S+LPA +++  
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317

Query: 255 LRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           LR GK +H YA++ G  D    V +ALVDMY  C +V + R VFDGM  R +  WN+MIA
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y +  + +EA+ +F  M +  G+   + T+   + AC   G   R   +H  + +  L 
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + N+L+ MYS+  K+D A  IF K++ + LV+WN MI GY  +    +AL    KM
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497

Query: 433 RS-----------KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           ++            ++KP+S T+++++P+ A LS +   K IHA  I++    +V V +A
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAKCG +  +R +FD + +++V TWNV+I  YG HG G+ A++L   M+    KPN
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           ++TF+   +ACSHSG+V+EG+  F  +K DYG+EP  DHY  +VDLLGRAGR+ EA+  +
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677

Query: 602 QKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
             MP +      + ++LGA +IH N+E+GE AA  L +L+P+   ++VLLANIY++A +W
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           DK  +VR  M+++G++K PGCS +E  +EVH F +G + HPQS+++  +LETL + ++  
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDT+ + H+VE+  +E LL  HSEKLAIAFG+LN+SPG+ I + KNLRVC DCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS +  REII+RD+ RFH FKNG CSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 36/574 (6%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L+   +   L +AV   + M    + P  Y +  LLK   D+ ++  GK+IH  +   G
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 169 FSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           + +D   +   +VN+Y KCG     YK+FDR+ ER+ VSWN++++        E+AL+  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 228 TRMHEEGRRGDFITIVSILPAVANVG---SLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
             M +E       T+VS++ A +N+     L +GK VH Y +R G  +   ++T LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMY 246

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G++ +++++      R++V+WN+++++  +     EA+   ++M+ +GVEP   TI 
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306

Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
             L AC+ L  L  G  +H   L    L  +  + ++L+ MY  CK+V     +F  +  
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           + +  WNAMI GY+QN    EAL  F  M  S  +  +S TM  V+PA          + 
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  V++   +++ FV   L+DMY++ G +  A  +F  M +R + TWN MI GY     
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486

Query: 523 GKAAVELFNKM--LEGPT---------KPNDITFLCAISACSHSGLVEEG--IHYFTSLK 569
            + A+ L +KM  LE            KPN IT +  + +C+    + +G  IH + ++K
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY-AIK 545

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
            +   +  +    A+VD+  + G L  +     ++P +  +  +  ++ A  +H N   G
Sbjct: 546 NNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---G 599

Query: 630 EKAANRLFEL-----DPDEGGYHVLLANIYAAAS 658
           ++A + L  +      P+E    V   +++AA S
Sbjct: 600 QEAIDLLRMMMVQGVKPNE----VTFISVFAACS 629



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 5/265 (1%)

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           +SR+   W  ++ + V      EA+  +  M+  G++P N      L A ADL D+E G 
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 361 FVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            +H  + +   G D V++ N+L+++Y KC        +F ++  +  VSWN++I      
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV---IRYAKWIHALVIRSCFEKNV 476
            +   AL  F  M  +N++P SFT+VSV+ A + L +   +   K +HA  +R   E N 
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F++  L+ MY K G + +++ L      R + TWN ++     +     A+E   +M+  
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 537 PTKPNDITFLCAISACSHSGLVEEG 561
             +P++ T    + ACSH  ++  G
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTG 321



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 135/268 (50%), Gaps = 16/268 (5%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K GL      Q  L+ ++ +   +  A R+F  + D+    ++TM+ GY      +D
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489

Query: 122 AVSFLIRMRYDD-----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           A+  L +M+  +           + P       +L  C  +  + +GKEIH   I N  +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+   + +V+MYAKCG ++ + K+FD++P++++++WN I+  +  +G  + A+DL+  M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCG 288
             +G + + +T +S+  A ++ G +  G  +  Y M+   G +   +    +VD+  + G
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAG 668

Query: 289 RVETARLVFDGMKS--RNVVSWNSMIAA 314
           R++ A  + + M        +W+S++ A
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 696



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 12/204 (5%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           LH+ ++   + +   SR+   P+++    +L  C +L  L   + I    IK+ L     
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV ++ K   L  + +VF+ IP K    ++ ++  Y    +  +A+  L  M    
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEA 192
           V P    +  +   C   G +  G  I   +  + G          VV++  + G+I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 193 YKMFDRMPERDLV---SWNTIVAG 213
           Y++ + MP RD     +W++++  
Sbjct: 674 YQLMNMMP-RDFNKAGAWSSLLGA 696


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/753 (39%), Positives = 460/753 (61%), Gaps = 19/753 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+L+ K        +VF+ I ++    +++++     F   + A+     M  ++V P 
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198

Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    ++  C ++     +  GK++H   +  G  L+ F +  +V MY K G++  +  
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 257

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +      RDLV+WNT+++   QN     AL+ +  M  EG   D  TI S+LPA +++  
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317

Query: 255 LRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           LR GK +H YA++ G  D    V +ALVDMY  C +V + R VFDGM  R +  WN+MIA
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y +  + +EA+ +F  M +  G+   + T+   + AC   G   R   +H  + +  L 
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + N+L+ MYS+  K+D A  IF K++ + LV+WN MI GY  +    +AL    KM
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497

Query: 433 RS-----------KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           ++            ++KP+S T+++++P+ A LS +   K IHA  I++    +V V +A
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAKCG +  +R +FD + +++V TWNV+I  YG HG G+ A++L   M+    KPN
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           ++TF+   +ACSHSG+V+EG+  F  +K DYG+EP  DHY  +VDLLGRAGR+ EA+  +
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677

Query: 602 QKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
             MP +      + ++LGA +IH N+E+GE AA  L +L+P+   ++VLLANIY++A +W
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           DK  +VR  M+++G++K PGCS +E  +EVH F +G + HPQS+++  +LETL + ++  
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDT+ + H+VE+  +E LL  HSEKLAIAFG+LN+SPG+ I + KNLRVC DCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS +  REII+RD+ RFH FKNG CSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 36/574 (6%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L+   +   L +AV   + M    + P  Y +  LLK   D+ ++  GK+IH  +   G
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 169 FSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           + +D   +   +VN+Y KCG     YK+FDR+ ER+ VSWN++++        E+AL+  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 228 TRMHEEGRRGDFITIVSILPAVANVG---SLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
             M +E       T+VS++ A +N+     L +GK VH Y +R G  +   ++T LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMY 246

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G++ +++++      R++V+WN+++++  +     EA+   ++M+ +GVEP   TI 
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306

Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
             L AC+ L  L  G  +H   L    L  +  + ++L+ MY  CK+V     +F  +  
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           + +  WNAMI GY+QN    EAL  F  M  S  +  +S TM  V+PA          + 
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  V++   +++ FV   L+DMY++ G +  A  +F  M +R + TWN MI GY     
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486

Query: 523 GKAAVELFNKM--LEGPT---------KPNDITFLCAISACSHSGLVEEG--IHYFTSLK 569
            + A+ L +KM  LE            KPN IT +  + +C+    + +G  IH + ++K
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY-AIK 545

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
            +   +  +    A+VD+  + G L  +     ++P +  +  +  ++ A  +H N   G
Sbjct: 546 NNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---G 599

Query: 630 EKAANRLFEL-----DPDEGGYHVLLANIYAAAS 658
           ++A + L  +      P+E    V   +++AA S
Sbjct: 600 QEAIDLLRMMMVQGVKPNE----VTFISVFAACS 629



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 5/265 (1%)

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           +SR+   W  ++ + V      EA+  +  M+  G++P N      L A ADL D+E G 
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 361 FVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            +H  + +   G D V++ N+L+++Y KC        +F ++  +  VSWN++I      
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV---IRYAKWIHALVIRSCFEKNV 476
            +   AL  F  M  +N++P SFT+VSV+ A + L +   +   K +HA  +R   E N 
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F++  L+ MY K G + +++ L      R + TWN ++     +     A+E   +M+  
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 537 PTKPNDITFLCAISACSHSGLVEEG 561
             +P++ T    + ACSH  ++  G
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTG 321



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 135/268 (50%), Gaps = 16/268 (5%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K GL      Q  L+ ++ +   +  A R+F  + D+    ++TM+ GY      +D
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489

Query: 122 AVSFLIRMRYDD-----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           A+  L +M+  +           + P       +L  C  +  + +GKEIH   I N  +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+   + +V+MYAKCG ++ + K+FD++P++++++WN I+  +  +G  + A+DL+  M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCG 288
             +G + + +T +S+  A ++ G +  G  +  Y M+   G +   +    +VD+  + G
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAG 668

Query: 289 RVETARLVFDGMKS--RNVVSWNSMIAA 314
           R++ A  + + M        +W+S++ A
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 696



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 12/204 (5%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           LH+ ++   + +   SR+   P+++    +L  C +L  L   + I    IK+ L     
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV ++ K   L  + +VF+ IP K    ++ ++  Y    +  +A+  L  M    
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEA 192
           V P    +  +   C   G +  G  I   +  + G          VV++  + G+I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 193 YKMFDRMPERDLV---SWNTIVAG 213
           Y++ + MP RD     +W++++  
Sbjct: 674 YQLMNMMP-RDFNKAGAWSSLLGA 696


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 321/823 (39%), Positives = 470/823 (57%), Gaps = 61/823 (7%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQ--TKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           L+ C SL   + +    I  GL    LF   T L+  +   NS + A  + E +P    +
Sbjct: 168 LKECNSLAHAKLLHQQSIMQGL----LFHLATNLIGTYIASNSTAYAILLLERLPPSPSS 223

Query: 105 LY--HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           ++  + +++      S  D  +   +M+     P  Y + ++ K C ++  +  G  +H 
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHA 283

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGFAQNGF 219
            +  +GF+ ++F    VV+MY KCG +  A+ MFD +  R   DLVSWN++V+ +     
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD 343

Query: 220 AELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           A  AL L  +M        D I++V+ILPA A++ +   G+ VHG+++R+G    V V  
Sbjct: 344 ANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGN 403

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE---------------- 322
           A+VDMYAKCG++E A  VF  MK ++VVSWN+M+  Y + G  E                
Sbjct: 404 AVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463

Query: 323 -------------------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
                              EA+ +F++M D G  P  VT++  L AC  +G L  G   H
Sbjct: 464 DVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETH 523

Query: 364 KL-------LDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKT--LVSWNAMI 413
                    LD    G D + + N LI MY+KC+  + A  +F  +  K   +V+W  MI
Sbjct: 524 CYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMI 583

Query: 414 LGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
            GYAQ+G  N AL  F  M    K+IKP+ FT+   + A A L+ +R+ + +HA V+R+ 
Sbjct: 584 GGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNF 643

Query: 472 FEK-NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
           +    +FV   LIDMY+K G V TA+ +FD M +R+  +W  ++ GYG HG G+ A+ +F
Sbjct: 644 YGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVF 703

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           ++M + P  P+ ITFL  + ACSHSG+V+ GI++F  + KD+G++P  +HY  MVDL GR
Sbjct: 704 DEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGR 763

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGRL EA   I +MP+EP   V+ A+L AC++H NVELGE AANRL EL+    G + LL
Sbjct: 764 AGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLL 823

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           +NIYA A  W  +A++R  M++ G++K PGCS ++ +  V +FY G   HPQS++IY  L
Sbjct: 824 SNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETL 883

Query: 711 ETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
             LI  IKA GYVP T+ ++HDV+D  + +LL  HSEKLA+A+G+L   P + I I KNL
Sbjct: 884 ADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNL 943

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           R+CGDCH+A  YIS +   EII+RD  RFH FKNG CSC  YW
Sbjct: 944 RICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/670 (41%), Positives = 418/670 (62%), Gaps = 1/670 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+ C  +  + +G+E+H  ++ +G   + +    +++MYAKCG + +A ++FD + +R+
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++  F        A      M   G + D +T VS+L A  N   L++G+ VH 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
              +AG +    V T+LV MYAKCG +  A+++FD +  +NVV+W  +IA Y + G  + 
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ + +KM    V P  +T    L  C     LE G  VH+ + Q   G ++ + N+LI+
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC  +  A  +F  L  + +V+W AM+ GYAQ G  +EA++ F +M+ + IKPD  T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             S + + +  + ++  K IH  ++ + +  +V++ +AL+ MYAKCG++  AR +F+ M+
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           ER+V  W  MI G   HG  + A+E F +M +   KP+ +TF   +SAC+H GLVEEG  
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           +F S+  DYGI+P+++HY   VDLLGRAG L EA + I  MP +PG +V+GA+L AC+IH
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
            +VE GE+AA  + +LDPD+ G +V L+NIYAAA  ++   KVR +MEK+ + K PG S 
Sbjct: 582 SDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSW 641

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           +E+  +VH F+     HP++K IY  L  L ++IK  GYVPDT  + HDV++  +   L 
Sbjct: 642 IEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLC 701

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
           SHSE+LAI +GL+ + PG+ I I KNLRVCGDCH A+K+IS V GREII RD HRFH F 
Sbjct: 702 SHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFV 761

Query: 803 NGVCSCGDYW 812
           +GVCSCGD+W
Sbjct: 762 DGVCSCGDFW 771



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 260/490 (53%), Gaps = 5/490 (1%)

Query: 36  SRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           +R+Y      LL+ C  L+ L   R +   I+KSG+      +  L+S++ K  SL+DA 
Sbjct: 92  TRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDAR 151

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           RVF+ I D+    +  M++ +       +A      M+     P    +  LL    +  
Sbjct: 152 RVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPE 211

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            ++ G+++H ++   G  L+    T +V MYAKCG I +A  +FD++PE+++V+W  ++A
Sbjct: 212 LLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIA 271

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+AQ G  ++AL+L+ +M +     + IT  SIL       +L  GK VH Y +++G+  
Sbjct: 272 GYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGR 331

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + V  AL+ MY KCG ++ AR +F  +  R+VV+W +M+  Y + G  +EA+ +F++M 
Sbjct: 332 EIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQ 391

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
            QG++P  +T   AL +C+    L+ G  +H+ L       DV + ++L+SMY+KC  +D
Sbjct: 392 QQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMD 451

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F+++  + +V+W AMI G AQ+GR  EAL YF +M+ + IKPD  T  SV+ A  
Sbjct: 452 DARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACT 511

Query: 453 ELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR-ALFDMMNERHVTTW 510
            + ++    K   ++ +    +  V   +  +D+  + G +  A   +  M  +   + W
Sbjct: 512 HVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVW 571

Query: 511 NVMIDGYGTH 520
             ++     H
Sbjct: 572 GALLSACRIH 581



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 234/466 (50%), Gaps = 37/466 (7%)

Query: 161 HGQLIVN-GF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           H QL  N GF  +D  A +G V++  K G+++EA  + + M          I+ G     
Sbjct: 47  HDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTM----------ILQG----- 91

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
                    TR++ +  RG       +L   A + SL  G+ VH   +++G      +  
Sbjct: 92  ---------TRVYSDVFRG-------LLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            L+ MYAKCG +  AR VFDG++ RN+VSW +MI A+V G    EA + ++ M   G +P
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT +  L+A  +   L+ G  VH  + +  L  +  +  SL+ MY+KC  + +A  IF
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            KL  K +V+W  +I GYAQ G+V+ AL    KM+   + P+  T  S++        + 
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           + K +H  +I+S + + ++V+ ALI MY KCG +  AR LF  +  R V TW  M+ GY 
Sbjct: 316 HGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYA 375

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL-KKDYGIEPV 577
             G    A++LF +M +   KP+ +TF  A+++CS    ++EG      L    Y ++  
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVY 435

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           +    A+V +  + G +++A     +M  E  +  + AM+  C  H
Sbjct: 436 LQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQH 478


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 296/770 (38%), Positives = 456/770 (59%), Gaps = 6/770 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L +  TS+  L +    I+  G  +     TKL        ++  A  +F  +      L
Sbjct: 26  LFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFL 85

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ +++G++   S   +++    +R   D+ P    Y + +       + R G  IHGQ 
Sbjct: 86  FNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQA 145

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG-FAELA 223
           IV+G   +L   + +V MY K  ++E+A K+FDRMPE+D + WNT+++G+ +N  + E  
Sbjct: 146 IVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
                 ++E   R D  T++ ILPAVA +  LR+G  +H  A + G  S   V T  + +
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y+KCG+++ A  +F   +  ++V++N+MI  Y   G  E ++ +F++++  G +  + T+
Sbjct: 266 YSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTL 325

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  +      G L     +H    +    +  S++ +L ++YSK  +++ A  +F +   
Sbjct: 326 VSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPE 382

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           K+L SWNAMI GY QNG   +A++ F +M++    P+  T+  ++ A A+L  +   KW+
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWV 442

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H LV  + FE +++V TALI MYAKCG++  AR LFD M +++  TWN MI GYG HG G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHG 502

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           + A+ +F++ML     P  +TFLC + ACSH+GLV+EG   F S+   YG EP + HY  
Sbjct: 503 QEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           +VD+LGRAG L  A  FI+ MPI+PG +V+  +LGAC+IHK+  L    + +LFELDPD 
Sbjct: 563 VVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            GYHVLL+NI++A   + + A VR   +K+ L K PG +L+E+    H F SG   HPQ 
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682

Query: 704 KRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
           K I+  LE L  +++ AGY P+T  ++HDVE+  +E ++  HSE+LAIAFGL+ + PG+ 
Sbjct: 683 KAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTE 742

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I I KNLRVC DCH ATK IS +T R I+VRD +RFH FK+GVCSCGDYW
Sbjct: 743 IRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 285/772 (36%), Positives = 468/772 (60%), Gaps = 5/772 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C    SLK+ + +   I  +G        +KL  ++     L +A+RVF+ +  + 
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++   AK      ++    +M    V    Y ++ + K    +  +  G+++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ +GF         +V  Y K  +++ A K+FD M ERD++SWN+I+ G+  NG AE 
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +  +M   G   D  TIVS+    A+   + +G+AVH + ++A F         L+D
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KCG +++A++VF  M  R+VVS+ SMIA Y   G   EA+++F++M ++G+ P   T
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L+ CA    L+ G  VH+ + +  +G D+ ++N+L+ MY+KC  +  A  +FS+++
Sbjct: 400 VTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYF-CKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            K ++SWN +I GY++N   NEAL+ F   +  K   PD  T+  V+PA A LS     +
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  ++R+ +  +  V  +L+DMYAKCGA+  AR LFD +  + + +W VMI GYG HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHG 579

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            GK A+ LFN+M +   +P++I+F+  + ACSHSGLV+EG  +F  ++ +  IEP ++HY
Sbjct: 580 FGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VD+L R G L++A+ FI+ MPI P  T++GA+L  C+IH +V+L E+ A ++FEL+P
Sbjct: 640 ACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEP 699

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GY+VL+ANIYA A  W+++ ++R  + ++GL+K PGCS +E+K  V+ F +G + +P
Sbjct: 700 ENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           ++++I  FL  +   +   GY P T  ++ D E+  +E  L  HSEKLA+A G+++S  G
Sbjct: 760 ETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLRVCGDCH   K++S +T REI++RD +RFH FK+G CSC  +W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 237/484 (48%), Gaps = 22/484 (4%)

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGK 259
           +R +   NT +  F ++G  + A+ L   +H  G+   D  T+ S+L   A+  SL+ GK
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAVKL---LHVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            V  +    GF    N+ + L  MY  CG ++ A  VFD +K    + WN ++    + G
Sbjct: 115 EVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSG 174

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +   ++ +F+KM+  GVE  + T      + + L  +  G  +H  + +   G   S+ N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGN 234

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL++ Y K  +VD A  +F ++  + ++SWN++I GY  NG   + L+ F +M    I+ 
Sbjct: 235 SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEI 294

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  T+VSV    A+  +I   + +H   +++CF +       L+DMY+KCG + +A+ +F
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVF 354

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M+ R V ++  MI GY   GL   AV+LF +M E    P+  T    ++ C+ + L++
Sbjct: 355 REMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLD 414

Query: 560 EGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI---TVFGA 615
           EG      +K+ D G +  + +  A++D+  + G + EA     +M ++  I   TV G 
Sbjct: 415 EGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472

Query: 616 MLGACKIHK-----NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
               C  ++     N+ L EK         PDE     +L    A+ S +DK  ++   +
Sbjct: 473 YSKNCYANEALSLFNLLLVEK------RFSPDERTVACVLPAC-ASLSAFDKGREIHGYI 525

Query: 671 EKKG 674
            + G
Sbjct: 526 MRNG 529


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/753 (39%), Positives = 460/753 (61%), Gaps = 19/753 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+L+ K        +VF+ I ++    +++++     F   + A+     M  ++V P 
Sbjct: 52  LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 111

Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    ++  C ++     +  GK++H   +  G  L+ F +  +V MY K G++  +  
Sbjct: 112 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 170

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +      RDLV+WNT+++   QN     AL+ +  M  EG   D  TI S+LPA +++  
Sbjct: 171 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230

Query: 255 LRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           LR GK +H YA++ G  D    V +ALVDMY  C +V + R VFDGM  R +  WN+MIA
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290

Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y +  + +EA+ +F  M +  G+   + T+   + AC   G   R   +H  + +  L 
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + N+L+ MYS+  K+D A  IF K++ + LV+WN MI GY  +    +AL    KM
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410

Query: 433 RS-----------KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           ++            ++KP+S T+++++P+ A LS +   K IHA  I++    +V V +A
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 470

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAKCG +  +R +FD + +++V TWNV+I  YG HG G+ A++L   M+    KPN
Sbjct: 471 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 530

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           ++TF+   +ACSHSG+V+EG+  F  +K DYG+EP  DHY  +VDLLGRAGR+ EA+  +
Sbjct: 531 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 590

Query: 602 QKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
             MP +      + ++LGA +IH N+E+GE AA  L +L+P+   ++VLLANIY++A +W
Sbjct: 591 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 650

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           DK  +VR  M+++G++K PGCS +E  +EVH F +G + HPQS+++  +LETL + ++  
Sbjct: 651 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 710

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDT+ + H+VE+  +E LL  HSEKLAIAFG+LN+SPG+ I + KNLRVC DCH AT
Sbjct: 711 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 770

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS +  REII+RD+ RFH FKNG CSCGDYW
Sbjct: 771 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 276/549 (50%), Gaps = 36/549 (6%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEA 192
           + P  Y +  LLK   D+ ++  GK+IH  +   G+ +D   +   +VN+Y KCG     
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           YK+FDR+ ER+ VSWN++++        E+AL+    M +E       T+VS++ A +N+
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 253 G---SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
                L +GK VH Y +R G  +   ++T LV MY K G++ +++++      R++V+WN
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQ 368
           +++++  +     EA+   ++M+ +GVEP   TI   L AC+ L  L  G  +H   L  
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
             L  +  + ++L+ MY  CK+V     +F  +  + +  WNAMI GY+QN    EAL  
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 304

Query: 429 FCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
           F  M  S  +  +S TM  V+PA          + IH  V++   +++ FV   L+DMY+
Sbjct: 305 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 364

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM--LEGPT------- 538
           + G +  A  +F  M +R + TWN MI GY      + A+ L +KM  LE          
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 424

Query: 539 --KPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
             KPN IT +  + +C+    + +G  IH + ++K +   +  +    A+VD+  + G L
Sbjct: 425 SLKPNSITLMTILPSCAALSALAKGKEIHAY-AIKNNLATDVAVG--SALVDMYAKCGCL 481

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL-----DPDEGGYHVL 649
             +     ++P +  +  +  ++ A  +H N   G++A + L  +      P+E    V 
Sbjct: 482 QMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQGVKPNE----VT 533

Query: 650 LANIYAAAS 658
             +++AA S
Sbjct: 534 FISVFAACS 542



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 203/383 (53%), Gaps = 20/383 (5%)

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVE 291
           G + D     ++L AVA++  + +GK +H +  + G+  DS V V+  LV++Y KCG   
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKCGDFG 63

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
               VFD +  RN VSWNS+I++       E A+  F+ MLD+ VEP++ T++  + AC+
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 352 DLGDLERGIFVHKLLDQLKLGT---DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           +L  +  G+ + K +    L     +  + N+L++MY K  K+  +  +     G+ LV+
Sbjct: 124 NL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN ++    QN ++ EAL Y  +M  + ++PD FT+ SV+PA + L ++R  K +HA  +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 469 RS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           ++   ++N FV +AL+DMY  C  V + R +FD M +R +  WN MI GY  +   K A+
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302

Query: 528 ELFNKMLEGP-TKPNDITFLCAISACSHSGLV--EEGIHYFT---SLKKDYGIEPVMDHY 581
            LF  M E      N  T    + AC  SG    +E IH F     L +D  ++      
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ------ 356

Query: 582 GAMVDLLGRAGRLNEAWDFIQKM 604
             ++D+  R G+++ A     KM
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKM 379



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 5/235 (2%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTNSLISMYSKCK 389
           M+  G++P N      L A ADL D+E G  +H  + +   G D V++ N+L+++Y KC 
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
                  +F ++  +  VSWN++I       +   AL  F  M  +N++P SFT+VSV+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 450 ALAELSV---IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           A + L +   +   K +HA  +R   E N F++  L+ MY K G + +++ L      R 
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           + TWN ++     +     A+E   +M+    +P++ T    + ACSH  ++  G
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 135/268 (50%), Gaps = 16/268 (5%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K GL      Q  L+ ++ +   +  A R+F  + D+    ++TM+ GY      +D
Sbjct: 343 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 402

Query: 122 AVSFLIRMRYDD-----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           A+  L +M+  +           + P       +L  C  +  + +GKEIH   I N  +
Sbjct: 403 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 462

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+   + +V+MYAKCG ++ + K+FD++P++++++WN I+  +  +G  + A+DL+  M
Sbjct: 463 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 522

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCG 288
             +G + + +T +S+  A ++ G +  G  +  Y M+   G +   +    +VD+  + G
Sbjct: 523 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAG 581

Query: 289 RVETARLVFDGMKS--RNVVSWNSMIAA 314
           R++ A  + + M        +W+S++ A
Sbjct: 582 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 609



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 12/204 (5%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           LH+ ++   + +   SR+   P+++    +L  C +L  L   + I    IK+ L     
Sbjct: 407 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 466

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV ++ K   L  + +VF+ IP K    ++ ++  Y    +  +A+  L  M    
Sbjct: 467 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 526

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEA 192
           V P    +  +   C   G +  G  I   +  + G          VV++  + G+I+EA
Sbjct: 527 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 586

Query: 193 YKMFDRMPERDLV---SWNTIVAG 213
           Y++ + MP RD     +W++++  
Sbjct: 587 YQLMNMMP-RDFNKAGAWSSLLGA 609


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 314/790 (39%), Positives = 456/790 (57%), Gaps = 8/790 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCT-SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           + +  +IP+  Y + S L       +L+ ++ +    + +GL         LV ++ K  
Sbjct: 122 MQREGFIPNS-YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           S+ DA  VF+ + ++    +  M+ G A+     +A S  ++M      P +  Y  +L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 147 VCG--DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
                  G +   KE+H      GF  DL     +++MYAKCG I++A  +FD M +RD+
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           +SWN ++ G AQNG    A  +  +M +EG   D  T +S+L    + G+    K VH +
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+  G  S + V +A V MY +CG ++ A+L+FD +  RNV +WN+MI    +     EA
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F +M  +G  P   T +  L A      LE    VH       L  D+ + N+L+ M
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC     A  +F  +  + + +W  MI G AQ+G  +EA + F +M  + I PD+ T 
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           VS++ A A    + + K +H+  + +    ++ V  AL+ MYAKCG+V  AR +FD M E
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           R V +W VMI G   HG G  A++LF KM LEG  KPN  +F+  +SACSH+GLV+EG  
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEG-FKPNGYSFVAVLSACSHAGLVDEGRR 658

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F SL +DYGIEP M+HY  MVDLLGRAG+L EA  FI  MPIEPG   +GA+LGAC  +
Sbjct: 659 QFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTY 718

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
            N+E+ E AA    +L P     +VLL+NIYAA   W++   VR++M+++G++K PG S 
Sbjct: 719 GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSW 778

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           +E+ N++HSF  G T HP+SK IY  L+ LI  +KA GYVPDT  +  + +   +E  L 
Sbjct: 779 IEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALC 838

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
           SHSEKLAI +GL+++   + I + KNLRVC DCH ATK+IS VTGREI+ RD  RFH FK
Sbjct: 839 SHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFK 898

Query: 803 NGVCSCGDYW 812
           +GVCSCGDYW
Sbjct: 899 DGVCSCGDYW 908



 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 8/583 (1%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C    SLK  ++I   II+SG       +T LV+++ K  S+ DA  +F+ + ++ 
Sbjct: 36  ILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERN 95

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ G A +    +A    ++M+ +   P  Y Y  +L      G +   KE+H 
Sbjct: 96  VISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 155

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G +LDL     +V+MYAK G I++A  +FD M ERD+ SW  ++ G AQ+G  + 
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215

Query: 223 ALDLVTRMHEEGRRGDFITIVSIL--PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           A  L  +M   G   +  T +SIL   A+ + G+L   K VH +A +AGF S + V  AL
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNAL 275

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           + MYAKCG ++ ARLVFDGM  R+V+SWN+MI    + G   EA  IF KM  +G  P +
Sbjct: 276 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDS 335

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T +  L+     G  E    VHK   ++ L +D+ + ++ + MY +C  +D A  IF K
Sbjct: 336 TTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK 395

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  + + +WNAMI G AQ     EAL+ F +MR +   PD+ T V+++ A      + + 
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H+  I +    ++ V  AL+ MYAKCG    A+ +FD M ER+VTTW VMI G   H
Sbjct: 456 KEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G  A  LF +ML     P+  T++  +SAC+ +G + E +    S   + G+   +  
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL-EWVKEVHSHAVNAGLVSDLRV 573

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
             A+V +  + G +++A      M +E  +  +  M+G    H
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQH 615



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 160/445 (35%), Positives = 241/445 (54%), Gaps = 2/445 (0%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ GYA++   +DA+    +MR +   P    Y  +LK C     ++ GK+IH  +I +G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           F  D+   T +VNMY KCG I++A  +FD+M ER+++SW  ++ G A  G  + A     
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           +M  EG   +  T VSIL A A+ G+L   K VH +A+ AG    + V  ALV MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            ++ AR+VFDGM  R++ SW  MI    + G  +EA  +F +M   G  P   T +  L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 349 ACA--DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           A A    G LE    VHK   +    +D+ + N+LI MY+KC  +D A  +F  +  + +
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           +SWNAMI G AQNG  +EA   F KM+ +   PDS T +S++          + K +H  
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
            +      ++ V +A + MY +CG++  A+ +FD +  R+VTTWN MI G      G+ A
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 527 VELFNKMLEGPTKPNDITFLCAISA 551
           + LF +M      P+  TF+  +SA
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSA 445


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 295/778 (37%), Positives = 458/778 (58%), Gaps = 6/778 (0%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           +  PS  +L+ CT  K+L   +++  +++ +G          LV L+ K     DA  +F
Sbjct: 11  FAFPS--VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           + IPD+    ++ +   Y       +AVS    M    + P  ++ + ++ VC  + +  
Sbjct: 69  DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           +G++IHG LI  G+  D F+   +V+MYAK G +E+A  +FD + + D+VSWN I+AG  
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            + +   AL+L+  M++ G   +  T+ S L A A +    +G+ +H   ++    S   
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +   L+DMY+KC  ++ ARLVF  M  R++++WN++I+ + +    EEA  +F  M  +G
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           +     T+   L + A L        +H L  +     D  + NSLI  Y KC  V+ A 
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F +     LV + +++  YAQ+G+  EAL  + +M+ + IKPDSF   S++ A A LS
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLS 428

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                K +H  +++  F  ++F   +L++MYAKCG++  A   F  +  R + +W+ MI 
Sbjct: 429 AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIG 488

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G   HG GK A++LF +ML+    PN IT +  + AC+H+GLV E  HYF S+K  +GIE
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIE 548

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P+ +HY  M+DLLGRAG+L  A + + KMP +    V+GA+LGA +IHKN++LGE+AA  
Sbjct: 549 PMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM 608

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           L  L+P++ G HVLLANIYA+  MWDK+A+VR +M+   ++K PG S +E+K++V++F  
Sbjct: 609 LLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIV 668

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   H +S  IY  L+ L D +K AGYVP     +HDVE   +E LL  HSEKLA+AFGL
Sbjct: 669 GDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGL 728

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + PG+ I ++KNLR+C DCH   K+IS +  REIIVRD +RFH F+ G CSCG+YW
Sbjct: 729 IATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 196/382 (51%), Gaps = 11/382 (2%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           MH  G + +     S+L A      L +GK VHG  +  GFDS   V+ +LV +YAKCG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              AR +FD +  R+VVSWN++ + YV      EA+ +F  M+  G+ P   ++   ++ 
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C  L D  +G  +H  L +L   +D    N+L+ MY+K   ++ A+ +F ++    +VSW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           NA+I G   +   + AL    +M    + P+ FT+ S + A A +++    + +H+ +I+
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                + F+   LIDMY+KC ++  AR +F +M ER +  WN +I G+  +   + A  L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 530 FNKMLE---GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAM 584
           F  M     G  +    T L +I+A   + +  + IH   SLK   G E   D+Y   ++
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQ-IHAL-SLKS--GFE--FDNYVVNSL 354

Query: 585 VDLLGRAGRLNEAWDFIQKMPI 606
           +D  G+ G + +A    ++ PI
Sbjct: 355 IDTYGKCGHVEDATRVFEESPI 376


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  577 bits (1487), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 297/773 (38%), Positives = 466/773 (60%), Gaps = 11/773 (1%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           AL+ + CT    L      +I++G        TKL        +   A  +F  +P    
Sbjct: 13  ALISKACT-FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDI 71

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIR-MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            L++ ++KG++ F+    ++SF    ++   ++P  + Y + +    D      G  +H 
Sbjct: 72  FLFNVLIKGFS-FSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHA 127

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +V+GF  +LF  + +V++Y K  ++  A K+FD+MP+RD V WNT++ G  +N   + 
Sbjct: 128 HAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDD 187

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           ++ +   M  +G R D  T+ ++LPAVA +  +++G  +   A++ GF     V T L+ 
Sbjct: 188 SVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLIS 247

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +++KC  V+TARL+F  ++  ++VS+N++I+ +   G  E A++ F+++L  G   ++ T
Sbjct: 248 VFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSST 307

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSK 400
           ++  +   +  G L     +      +K GT    S++ +L ++YS+  ++D A  +F +
Sbjct: 308 MVGLIPVSSPFGHLHLACCIQGFC--VKSGTILQPSVSTALTTIYSRLNEIDLARQLFDE 365

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
              KT+ +WNAMI GYAQ+G    A++ F +M +    P+  T+ S++ A A+L  + + 
Sbjct: 366 SSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFG 425

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H L+     E+N++V TALIDMYAKCG +  A  LFD+ +E++  TWN MI GYG H
Sbjct: 426 KSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLH 485

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G  A++LFN+ML    +P+ +TFL  + ACSH+GLV EG   F ++   Y IEP+ +H
Sbjct: 486 GYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEH 545

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVD+LGRAG+L +A +FI+KMP+EPG  V+G +LGAC IHK+  L   A+ RLFELD
Sbjct: 546 YACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELD 605

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P   GY+VLL+NIY+    + K A VR  ++K+ L KTPGC+L+E+    H F  G   H
Sbjct: 606 PGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSH 665

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
            Q+  IY  LE L  +++  GY  +T  ++HDVE+  +E + + HSEKLAIAFGL+ + P
Sbjct: 666 SQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEP 725

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+ I I KNLRVC DCH ATK+IS +T R I+VRD +RFH FK+G+CSCGDYW
Sbjct: 726 GTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  577 bits (1487), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/646 (44%), Positives = 423/646 (65%), Gaps = 5/646 (0%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++FA   +V+ Y + G++ EAY++FD MPERD+ +WN +++G  +N  A  A+ L+ RM 
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG  GD +T+ S+LP    +G   +   +H YA++ G    + V  AL+D+Y K G + 
Sbjct: 161 GEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLT 220

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A  VF GM  R++V+WNS+I+A  +GG    A+ +F  M++ GV P  +T++    A A
Sbjct: 221 EAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVA 280

Query: 352 DLGDLERGIFVHKLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
             GD      VH  + +      D+   N+++ MY+K  K+D A  +F  L  + +VSWN
Sbjct: 281 QCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWN 340

Query: 411 AMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
            +I GY QNG  NEA+  +  M + + +KP   T VSV+PA + L  ++    +HAL I+
Sbjct: 341 TLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIK 400

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
           +    +V+V T LID+YAKCG +  A  LF+ M  R    WN +I G G HG G  A+ L
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSL 460

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F++M +   KP+ +TF+  ++ACSH+GLV++G  +F  ++  YGI P+  HY  MVD+LG
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG+L+EA++FIQ MPI+P   V+GA+LGAC+IH NVE+G+ A+  LFELDP+  GY+VL
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 580

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST--KHPQSKRIY 707
           ++N+YA    WD +  VR+++ ++ LQKTPG S +E+K  V  FYSG+    HPQ + I 
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQ 640

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             L  L+ ++K+AGYVPD + +  DVE+  +E +L++HSE+LAIAFG++N+ PG+ +HI 
Sbjct: 641 RGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIY 700

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVCGDCH+ATKYIS +T REIIVRD +RFH FK+G CSCGD+W
Sbjct: 701 KNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 253/506 (50%), Gaps = 46/506 (9%)

Query: 64  IKSGLCDQHLFQT-KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++ GL   ++F +  LV  + ++  +++A RVF+ +P++    ++ ML G  +     DA
Sbjct: 93  LRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADA 152

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           V+ L RM  + VA      + +L +C  +G+      +H   + +G S +LF    ++++
Sbjct: 153 VTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDV 212

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y K G + EA+ +F  M  RDLV+WN+I++   Q G    A++L   M E G   D +T+
Sbjct: 213 YGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTL 272

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           VS+  AVA  G     K+VH Y  R G+D   +    A+VDMYAK  +++ A+ VFD + 
Sbjct: 273 VSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP 332

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGI 360
            R+VVSWN++I  Y++ G   EA+RI+  M + +G++P   T +  L A + LG L++G+
Sbjct: 333 DRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGM 392

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H L  +  L  DV +T  LI +Y+KC K+  A  +F  +  ++   WNA+I G   +G
Sbjct: 393 RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHG 452

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +AL+ F +M+ + IKPD  T VS++ A +           HA               
Sbjct: 453 HGAKALSLFSQMQQEEIKPDHVTFVSLLAACS-----------HA--------------- 486

Query: 481 ALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
                    G V   R+ FD+M   +        +  M+D  G  G    A E    M  
Sbjct: 487 ---------GLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSM-- 535

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG 561
            P KP+   +   + AC   G VE G
Sbjct: 536 -PIKPDSAVWGALLGACRIHGNVEMG 560



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 20/262 (7%)

Query: 347 LHACA-DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           LHACA  LG L   +F                + SL+  Y +  +V  A  +F ++  + 
Sbjct: 88  LHACALRLGLLHPNVFA---------------SGSLVHAYLRFGRVAEAYRVFDEMPERD 132

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           + +WNAM+ G  +N R  +A+    +M  + +  D+ T+ SV+P    L     A  +H 
Sbjct: 133 VPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHV 192

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             ++      +FV  ALID+Y K G +  A  +F  M  R + TWN +I      G   A
Sbjct: 193 YAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAA 252

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSG--LVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           AVELF+ M+E    P+ +T +   SA +  G  L  + +H +   ++ + +  ++    A
Sbjct: 253 AVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVR-RRGWDVGDIIAG-NA 310

Query: 584 MVDLLGRAGRLNEAWDFIQKMP 605
           MVD+  +  +++ A      +P
Sbjct: 311 MVDMYAKMSKIDAAQKVFDNLP 332



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L++  R+  L IK+GL       T L+ L+ K   L +A  +FE +P +    ++ ++ G
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL-IVNGFSL 171
                    A+S   +M+ +++ P    +  LL  C   G + +G+     +  V G   
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVP 507

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELA 223
                T +V+M  + GQ++EA++    MP + D   W  ++     +G  E+ 
Sbjct: 508 IAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMG 560


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 292/734 (39%), Positives = 444/734 (60%), Gaps = 4/734 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S+F ++ +L DA  VF  +  +    ++ ++ GYAK    D+A+    RM +  V P 
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG +  + RG+EIH  +I  GF  D+  +  ++ MY KCG +  A  +FD
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFD 266

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +MP RD +SWN +++G+ +NG     L L   M +     D +T+ S++ A   +G  R+
Sbjct: 267 KMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRL 326

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +HGY +R  F    ++  +L+ MY+  G +E A  VF   + R++VSW +MI+ Y  
Sbjct: 327 GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYEN 386

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
              P++A+  ++ M  +G+ P  +TI   L AC+ L +L+ G+ +H++  Q  L +   +
Sbjct: 387 CLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIV 446

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NSLI MY+KCK +D+A +IF     K +VSW ++ILG   N R  EAL +F +M  + +
Sbjct: 447 ANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRL 505

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-R 496
           KP+S T+V V+ A A +  +   K IHA  +R+    + F+  A++DMY +CG +  A +
Sbjct: 506 KPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWK 565

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             F + +E  VT+WN+++ GY   G G  A ELF +M+E    PN++TF+  + ACS SG
Sbjct: 566 QFFSVDHE--VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSG 623

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           +V EG+ YF S+K  Y I P + HY  +VDLLGR+G+L EA++FIQKMP++P   V+GA+
Sbjct: 624 MVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGAL 683

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L +C+IH +VELGE AA  +F+ D    GY++LL+N+YA    WDK+A+VR +M + GL 
Sbjct: 684 LNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLI 743

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYV 736
             PGCS VE+K  VH+F S    HPQ K I   LE    ++K AG     +S  D+ +  
Sbjct: 744 VDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHMDIMEAS 803

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           + ++   HSE+LAI FGL+NS PG  I + KNL +C  CHN  K+IS    REI VRD  
Sbjct: 804 KADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAE 863

Query: 797 RFHCFKNGVCSCGD 810
           +FH FK G+CSC D
Sbjct: 864 QFHHFKGGICSCTD 877



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 263/504 (52%), Gaps = 8/504 (1%)

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
             +LD A+S+L  M    +      Y  L+++C      + G  ++  + ++   L L  
Sbjct: 84  LGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQL 143

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
              +++M+ + G + +A+ +F RM +R+L SWN +V G+A+ G  + ALDL  RM   G 
Sbjct: 144 GNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGV 203

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           + D  T   +L     + +L  G+ +H + +R GF+S V+V  AL+ MY KCG V TARL
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARL 263

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VFD M +R+ +SWN+MI+ Y E G   E +R+F  M+   V+P  +T+   + AC  LGD
Sbjct: 264 VFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
              G  +H  + + + G D S+ NSLI MYS    ++ A  +FS+ + + LVSW AMI G
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISG 383

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y       +AL  +  M ++ I PD  T+  V+ A + L  +     +H +  +      
Sbjct: 384 YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSY 443

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             V  +LIDMYAKC  +  A  +F    E+++ +W  +I G   +     A+  F +M+ 
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR 503

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
              KPN +T +C +SAC+  G +  G  IH   +L+     +  M +  A++D+  R GR
Sbjct: 504 -RLKPNSVTLVCVLSACARIGALTCGKEIHAH-ALRTGVSFDGFMPN--AILDMYVRCGR 559

Query: 594 LNEAWDFIQKMPIEPGITVFGAML 617
           +  AW   Q   ++  +T +  +L
Sbjct: 560 MEYAWK--QFFSVDHEVTSWNILL 581



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 184/425 (43%), Gaps = 10/425 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   ++++           L+ ++     + +A  VF     +    +  M+ GY   
Sbjct: 328 RQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENC 387

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A+     M  + + P       +L  C  +  +  G  +H      G        
Sbjct: 388 LMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVA 447

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++MYAKC  I++A ++F    E+++VSW +I+ G   N     AL     M     +
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LK 506

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + +T+V +L A A +G+L  GK +H +A+R G      +  A++DMY +CGR+E A   
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  +    V SWN ++  Y E G    A  +FQ+M++  V P  VT +  L AC+  G +
Sbjct: 567 FFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625

Query: 357 ERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMIL 414
             G+ + + +  +  +  ++     ++ +  +  K++ A +   K+  K     W A++ 
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL- 684

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
               + R++  +    ++ ++NI  D  T V     L+ L      KW     +R    +
Sbjct: 685 ---NSCRIHHHVE-LGELAAENIFQDDTTSVGYYILLSNLYADN-GKWDKVAEVRKMMRQ 739

Query: 475 NVFVM 479
           N  ++
Sbjct: 740 NGLIV 744


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 306/816 (37%), Positives = 467/816 (57%), Gaps = 56/816 (6%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYH-- 107
           C ++ +++ I   ++  G+   +L  + L+S +     LS A  +    P     +YH  
Sbjct: 38  CKTISQVKLIHQKLLSFGILTLNL-TSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWN 96

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           ++++ Y      +  +S    M      P  Y + ++ K CG++  +R G   H    V 
Sbjct: 97  SLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVT 156

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GF  ++F    +V MY++CG + +A K+FD MP  D+VSWN+I+  +A+ G  ++AL++ 
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216

Query: 228 TRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
           ++M  E G R D IT+V++LP  A+VG+  +GK  HG+A+ +     + V   LVDMYAK
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM--------------- 331
            G ++ A  VF  M  ++VVSWN+M+A Y + G  E+A+R+F++M               
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336

Query: 332 --------------------LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
                               L  G++P  VT++  L  CA +G L  G  +H    +  +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396

Query: 372 -------GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT--LVSWNAMILGYAQNGRV 422
                  G +  + N LI MY+KCKKVD A  +F  L  K   +V+W  MI GY+Q+G  
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456

Query: 423 NEALNYFCKMRSKN--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN---VF 477
           N+AL    +M  ++   +P++FT+   + A A L+ +   K IHA  +R+  ++N   +F
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPLF 514

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V   LIDMYAKCG +G AR +FD M E++  TW  ++ GYG HG G+ A+ +F +M    
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIG 574

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            K + +T L  + ACSHSG++++G+ YF  +K D+G+ P  +HY  +VDLLGRAGRLN A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAA 634

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
              I++MP+EP   V+ A+L  C+IH  VELGE AA ++ EL  +  G + LL+N+YA A
Sbjct: 635 LRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANA 694

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             W  + ++R++M  KG++K PGCS VE      +F+ G   HP +K IY  L   +  I
Sbjct: 695 GRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRI 754

Query: 718 KAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           K  GYVP+T  ++HDV+D  +++LL  HSEKLA+A+G+L +  G+ I I KNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            A  Y+S +   EII+RD  RFH FKNG+CSC  YW
Sbjct: 815 TAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 148/304 (48%), Gaps = 21/304 (6%)

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGK 404
           +H C  +  ++    +H+ L    + T +++T+ LIS Y     +  A  +  +      
Sbjct: 35  IHKCKTISQVK---LIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDA 90

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +  WN++I  Y  NGR N+ L+ FC M S +  PD++T   V  A  E+S +R     H
Sbjct: 91  GVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSH 150

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           AL   + F  NVFV  AL+ MY++CG++  AR +FD M    V +WN +I+ Y   G  K
Sbjct: 151 ALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPK 210

Query: 525 AAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHY 581
            A+E+F+KM  E   +P+DIT +  +  C+  G    G   H F         E + + +
Sbjct: 211 MALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS-----EMIQNMF 265

Query: 582 --GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
               +VD+  + G ++EA      MP++  ++    + G  +I +  +     A RLFE 
Sbjct: 266 VGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFED-----AVRLFEQ 320

Query: 640 DPDE 643
             +E
Sbjct: 321 MQEE 324


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/674 (42%), Positives = 419/674 (62%), Gaps = 6/674 (0%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC--GQIEEAYKMFDRM 199
           T +L+ C     IR   EIH  LI     L       ++   A      ++ A  +F ++
Sbjct: 28  TLILEQCKT---IRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            E D  ++N ++ GF        A+ L   MHE   + D  T   IL   + + +L  G+
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H   M+ GF S   V   L+ MYA CG VE AR VFD M  RNV +WNSM A Y + G
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           N EE +++F +ML+  +    VT++  L AC  L DLE G ++++ +++  L  + ++  
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL+ MY+KC +VD A  +F ++  + +V+W+AMI GY+Q  R  EAL+ F +M+  NI P
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  TMVS++ + A L  +   KW+H  + +   +  V + TAL+D YAKCG+V ++  +F
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVF 384

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M  ++V +W V+I G  ++G GK A+E F  MLE   +PND+TF+  +SACSH+GLV+
Sbjct: 385 GKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVD 444

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F S+ +D+GIEP ++HYG MVD+LGRAG + EA+ FI+ MPI+P   ++  +L +
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           CK+HKNVE+GE++  +L  L+P   G ++LL+NIYA+   W+   KVR  M++KG++KTP
Sbjct: 505 CKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTP 564

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQE 738
           GCSL+EL   +H F++    H QS+ IY  +E ++ +IK+AGYVP+T     D E+  +E
Sbjct: 565 GCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKE 624

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
           + +S HSEKLAIAFGL+ S PG+TI I KNLRVC DCHNATK +S V  REI+VRD  RF
Sbjct: 625 SSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRF 684

Query: 799 HCFKNGVCSCGDYW 812
           H FK G CSC DYW
Sbjct: 685 HHFKEGSCSCNDYW 698


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/671 (41%), Positives = 420/671 (62%), Gaps = 2/671 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+ C  +  + +G+E+H  ++ +G   + +    +++MYAKCG + +A ++FD + +R+
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++  F        A      M   G + D +T VS+L A  N   L++G+ VH 
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             + AG +    V T+LV MYAKCG +  AR++FD +  +NVV+W  +IA Y + G  + 
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ + + M    V P  +T    L  C     LE G  VH+ + Q   G ++ + NSLI+
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC  ++ A  +FS L  + +V+W AM+ GYAQ G  +EA+N F +M+ + IKPD  T
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             SV+ + +  + ++  K IH  ++ + +  +V++ +AL+ MYAKCG++  A  +F+ M+
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412

Query: 504 ERHVTTWNVMIDG-YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           ER+V  W  +I G    HG  + A+E F++M +   KP+ +TF   +SAC+H GLVEEG 
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
            +F S+  DYGI+P+++HY   VDLLGRAG L EA + I  MP  PG +V+GA+L AC++
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
           H +VE GE+AA  + +LDPD+ G +V L++IYAAA  ++   KVR +MEK+ + K PG S
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 592

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLL 741
            +E+  +VH F+     HP+S++IY  L  L ++IK  GYVPDT  + HDV++  +E +L
Sbjct: 593 WIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERIL 652

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
            SHSE+LAI +GL+ + PG  I I KNLRVCGDCH ATK+IS V GREII RD  RFH F
Sbjct: 653 FSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHF 712

Query: 802 KNGVCSCGDYW 812
            +GVCSCGD+W
Sbjct: 713 ADGVCSCGDFW 723



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 239/430 (55%), Gaps = 4/430 (0%)

Query: 36  SRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           +R+Y      LL+ C  L+ L   R +   I+KSG+      +  L+S++ K  SL+DA 
Sbjct: 43  TRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDAR 102

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           RVF+ I D+    +  M++ +       +A      M+     P    +  LL    +  
Sbjct: 103 RVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPE 162

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            ++ G+++H +++  G  L+    T +V MYAKCG I +A  +FDR+PE+++V+W  ++A
Sbjct: 163 LLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIA 222

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+AQ G  ++AL+L+  M +     + IT  SIL       +L  GK VH Y +++G+  
Sbjct: 223 GYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGR 282

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + V  +L+ MY KCG +E AR +F  +  R+VV+W +M+  Y + G  +EA+ +F++M 
Sbjct: 283 ELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQ 342

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
            QG++P  +T    L +C+    L+ G  +H+ L       DV + ++L+SMY+KC  +D
Sbjct: 343 QQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMD 402

Query: 393 RAADIFSKLQGKTLVSWNAMILG-YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
            A+ +F+++  + +V+W A+I G  AQ+GR  EAL YF +M+ + IKPD  T  SV+ A 
Sbjct: 403 DASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSAC 462

Query: 452 AELSVIRYAK 461
             + ++   +
Sbjct: 463 THVGLVEEGR 472



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 209/411 (50%), Gaps = 4/411 (0%)

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           V+   + G  + AL ++  M  +G R        +L   A + SL  G+ VH   +++G 
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
                +   L+ MYAKCG +  AR VFD ++ RN+VSW +MI A+V G    EA + ++ 
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M   G +P  VT +  L+A  +   L+ G  VH  + +  L  +  +  SL+ MY+KC  
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           + +A  IF +L  K +V+W  +I GYAQ G+V+ AL     M+   + P+  T  S++  
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
               + + + K +H  +I+S + + ++V+ +LI MY KCG +  AR LF  +  R V TW
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL-K 569
             M+ GY   G    A+ LF +M +   KP+ +TF   +++CS    ++EG      L  
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
             Y ++  +    A+V +  + G +++A     +M  E  +  + A++  C
Sbjct: 379 AGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/648 (43%), Positives = 424/648 (65%), Gaps = 9/648 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D FA   +V+ Y + G++ +AY+ FD M  RD+ +WN +++G  +N  A  A+ L  RM 
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG  GD +T+ S+LP    +G   +  A+H YA++ G D  + V  A++D+Y K G +E
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
             R VFDGM SR++V+WNS+I+ + +GG    A+ +F  M D GV P  +T++    A A
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVS---MTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
             GD+  G  VH  +  ++ G DV      N+++ MY+K  K++ A  +F  +  +  VS
Sbjct: 283 QCGDICGGRSVHCYM--VRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340

Query: 409 WNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           WN +I GY QNG  +EA++ +  M + + +KP   T VSV+PA + L  ++    +HAL 
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I++    +V+V T +ID+YAKCG +  A  LF+    R    WN +I G G HG G  A+
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF++M +    P+ +TF+  ++ACSH+GLV++G ++F  ++  YGI+P+  HY  MVD+
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
            GRAG+L++A+DFI+ MPI+P   ++GA+LGAC+IH NVE+G+ A+  LFELDP   GY+
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYY 580

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK--HPQSKR 705
           VL++N+YA    WD + +VR+++ ++ LQKTPG S +E+K  V+ FYSG+    HPQ + 
Sbjct: 581 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEE 640

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           I   L  L+ +I++ GYVPD + +  DVE+  +E +L++HSE+LAIAFG++N+ P + +H
Sbjct: 641 IQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLH 700

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLRVCGDCHNATKYIS +T REIIVRD +RFH FK+G CSCGD+W
Sbjct: 701 IYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 239/491 (48%), Gaps = 45/491 (9%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV  + ++  + DA R F+ +  +    ++ ML G  + A   +AV    RM  + VA  
Sbjct: 110 LVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGD 169

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               + +L +C  +G+      +H   + +G   +LF    ++++Y K G +EE  K+FD
Sbjct: 170 AVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFD 229

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  RDLV+WN+I++G  Q G    A+++   M + G   D +T++S+  A+A  G +  
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289

Query: 258 GKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           G++VH Y +R G+D   +    A+VDMYAK  ++E A+ +FD M  R+ VSWN++I  Y+
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349

Query: 317 EGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           + G   EA+ ++  M   +G++P   T +  L A + LG L++G  +H L  +  L  DV
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +   +I +Y+KC K+D A  +F +   ++   WNA+I G   +G   +AL+ F +M+ +
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I PD  T VS++ A +           HA                        G V   
Sbjct: 470 GISPDHVTFVSLLAACS-----------HA------------------------GLVDQG 494

Query: 496 RALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           R  F+MM   +        +  M+D +G  G    A +    M   P KP+   +   + 
Sbjct: 495 RNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNM---PIKPDSAIWGALLG 551

Query: 551 ACSHSGLVEEG 561
           AC   G VE G
Sbjct: 552 ACRIHGNVEMG 562


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 299/768 (38%), Positives = 479/768 (62%), Gaps = 12/768 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L   C ++   +++  L++  G     +  TKL++L+  +  +S +   F+ I  K    
Sbjct: 28  LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRY----DDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           +++++  Y +F    +A++ + ++        + P  Y +  +LK C  + +   GK++H
Sbjct: 88  WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVH 144

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +   GF  D+F    +V++Y++ G ++ A+K+F  MP +D+ SWN +++GF QNG A 
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL ++ RM  EG + D IT+ SILP  A    +  G  +H + ++ G DS V VS AL+
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +MY+K GR++ A++VFD M+ R++VSWNS+IAAY +  +P  A+R F+ M   G+ P  +
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324

Query: 342 TIMEALHACADLGD--LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           T++      + L D  + R I    ++ +  L  DV + N+L++MY+K   ++ A  +F 
Sbjct: 325 TVVSLTSIFSQLSDQRISRSILGF-VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIR 458
           +L  K  +SWN ++ GY QNG  +EA++ +  M   ++  P+  T VS+IPA + +  ++
Sbjct: 384 QLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
               IHA +I++    +VFV T LID+Y KCG +  A +LF  +       WN +I   G
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLG 503

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A++LF  ML    K + ITF+  +SACSHSGLV+EG   F  ++K+YGI+P +
Sbjct: 504 IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSL 563

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HYG MVDLLGRAG L +A++ ++ MPI+P  +++GA+L ACKI+ N ELG  A++RL E
Sbjct: 564 KHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLE 623

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           +D +  GY+VLL+NIYA    W+ + KVR++   +GL+KTPG S V + ++   FY+G+ 
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQ 683

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+   IY  L+ L  ++K+ GYVPD + ++ D+E+  +E +L+SHSE+LAIAFG++++
Sbjct: 684 THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIST 743

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
            P S I I KNLRVCGDCHNATKYIS ++ REI+VRD +RFH FK+G+
Sbjct: 744 PPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/733 (38%), Positives = 450/733 (61%), Gaps = 2/733 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S+F ++  + +A  VF  + ++    ++ ++ GY K    D+A+    R+ +  + P 
Sbjct: 75  LLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPD 134

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ C    ++ RG+E+H  ++   F +D+  +  ++ MY KCG +  A  +FD
Sbjct: 135 VYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFD 194

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +MP RD +SWN +++G+ +N      L+L  RM E     D +T+ S++ A   +G  R+
Sbjct: 195 KMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERL 254

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H Y +R  +D  ++V  +L+ MY   G  + A  VF GM+ R+VVSW ++I+  V+
Sbjct: 255 GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVD 314

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
              P++A+  ++ M   G  P  VTI   L ACA LG L+ G+ +H+L ++      V +
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVV 374

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NSLI MYSKCK++++A +IF ++  K ++SW ++I G   N R  EAL +F KM  K+ 
Sbjct: 375 ANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS- 433

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T++S + A A +  +   K IHA  +++    + F+  A++D+Y +CG + TA  
Sbjct: 434 KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALN 493

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F++ NE+ V  WN+++ GY   G G   +ELF +M+E    P+D+TF+  + ACS SG+
Sbjct: 494 QFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGM 552

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V EG+ YF  +K +Y I P + HY  +VDLLGRAG+LNEA +FI++MPI+P   ++GA+L
Sbjct: 553 VTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC+IH++V LGE AA  +F+ D +  GY++LL N+YA +  WD++AKVR  M+++GL  
Sbjct: 613 NACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIV 672

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ 737
            PGCS VE+K +VH+F SG   HPQ + I   LE   +++K +G+     S  D     +
Sbjct: 673 DPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSK 732

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
            ++   HSE+ AIA+ L+NS+PG  I + KNL +C  CH+  K+IS +  REI VRD  +
Sbjct: 733 ADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQ 792

Query: 798 FHCFKNGVCSCGD 810
           FH FK+G+CSCGD
Sbjct: 793 FHHFKDGLCSCGD 805



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 170/332 (51%), Gaps = 1/332 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V +  AL+ M+ + G V  A  VF  M  R++ SWN ++  Y + G  +EA+ ++ ++L 
Sbjct: 69  VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+ P   T    L +CA   DL RG  VH  + +     DV + N+LI+MY KC  V  
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F K+  +  +SWNAMI GY +N    E L  F +MR  +I PD  TM SVI A   
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L   R    +H+ V+R+ ++ N+ V  +LI MY   G    A ++F  M  R V +W  +
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I G   + L   A+E +  M    T P+++T    +SAC+  G ++ G+      ++   
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           I  V+    +++D+  +  R+ +A +   ++P
Sbjct: 369 ILYVVVA-NSLIDMYSKCKRIEKALEIFHQIP 399



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK-LLD 367
           NS +      GN E+A++    M +  +       +  +  C +      G +V K +L 
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
            L     V + N+L+SM+ +   V  A ++F ++  + L SWN ++ GY + G  +EAL 
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            + ++    I+PD +T  SV+ + A    +   + +HA V+R  F+ +V V+ ALI MY 
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG V +AR LFD M  R   +WN MI GY  +      +ELF +M E    P+ +T   
Sbjct: 182 KCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTS 241

Query: 548 AISACSHSG 556
            ISAC   G
Sbjct: 242 VISACELLG 250


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/766 (39%), Positives = 457/766 (59%), Gaps = 35/766 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+++ K   L DA +VF+ I ++    +++++    +F   + A+     M  +   P 
Sbjct: 53  LVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPS 112

Query: 138 VYNYTYLLKVCGDVGE---IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    +   C ++ +   +  GK+IHG     G     F+   ++ MYAK G++++A  
Sbjct: 113 SFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKS 171

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +     +RDLV+WN++++ F+QN     AL  +  M  EG + D +T  S+LPA +++  
Sbjct: 172 LLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDL 231

Query: 255 LRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           LR GK +H YA+R   D I N  V +ALVDMY  CG+VE+ RLVFD +  R +  WN+MI
Sbjct: 232 LRTGKEIHAYALRTD-DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMI 290

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL-HACADLGDLERGIFVHKLLDQLKL 371
           A Y +  + E+A+ +F +M       +N T M ++  A      + R   +H  + +  L
Sbjct: 291 AGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGL 350

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            T+  + N+LI MYS+   +  +  IF  ++ + +VSWN +I  Y   GR ++AL    +
Sbjct: 351 ETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHE 410

Query: 432 M----------------RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           M                +    KP+S T+++V+P  A LS +   K IHA  IR+     
Sbjct: 411 MQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQ 470

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           V V +AL+DMYAKCG +  AR +FD M  R+V TWNV+I  YG HG GK ++ELF  M+ 
Sbjct: 471 VTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVA 530

Query: 536 -----GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
                G  KP ++TF+   ++CSHSG+V+EG+  F  +K ++GIEP  DHY  +VDL+GR
Sbjct: 531 EGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGR 590

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGA---MLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           AG++ EA+  +  MP   G    GA   +LGAC+I+ N+E+GE AA  L +L PD   ++
Sbjct: 591 AGKVEEAYGLVNTMP--SGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHY 648

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIY++A +WDK   +R  M+  G++K PGCS +E  +EVH F +G   HPQS++++
Sbjct: 649 VLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLH 708

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
            FLETL + +K  GYVPDT  + HD+++  +E +L  HSEKLAIAFG+LN+ PG+TI + 
Sbjct: 709 DFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVA 768

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC DCH A+K+IS +  REII+RD  RFH FK+G CSCGDYW
Sbjct: 769 KNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 172/585 (29%), Positives = 286/585 (48%), Gaps = 53/585 (9%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTG-VVNMYAKCGQIEEA 192
           +P  + +  +LK    + E+  GK+IH  +   G+ S     +   +VNMY KCG + +A
Sbjct: 7   SPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDA 66

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           YK+FDR+ ERD VSWN+I++   +    E+A+     M  EG      T+VS+  A +N+
Sbjct: 67  YKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNL 126

Query: 253 ---GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
                L +GK +HG   R G     + + AL+ MYAK GR++ A+ +    + R++V+WN
Sbjct: 127 RKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWN 185

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           SMI+++ +     EA+   + M+ +GV+P  VT    L AC+ L  L  G  +H      
Sbjct: 186 SMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH----AY 241

Query: 370 KLGTDVSMTNS-----LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            L TD  + NS     L+ MY  C +V+    +F  +  + +  WNAMI GYAQ+    +
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEK 301

Query: 425 ALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           AL  F +M  +  +  ++ TM S++PA      I   + IH  VI+   E N ++  ALI
Sbjct: 302 ALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALI 361

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML--------- 534
           DMY++ G + T++ +FD M +R + +WN +I  Y   G    A+ L ++M          
Sbjct: 362 DMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYD 421

Query: 535 -------EGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHY---- 581
                  + P KPN IT +  +  C+    + +G  IH        Y I  ++       
Sbjct: 422 GDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA-------YAIRNLLASQVTVG 474

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVELGEK---AAN 634
            A+VD+  + G LN A     +MPI   IT +  ++ A  +H    +++EL E       
Sbjct: 475 SALVDMYAKCGCLNLARRVFDQMPIRNVIT-WNVIIMAYGMHGKGKESLELFEDMVAEGA 533

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           +  E+ P E  +  L A+   +  + + L+    +  + G++  P
Sbjct: 534 KGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAP 578



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 154/337 (45%), Gaps = 36/337 (10%)

Query: 2   SSHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILP 61
           S H +  L +F        L+ +  T+S  + +P+ +           C  +     I  
Sbjct: 296 SEHDEKALMLFIEMEAAAGLYSNATTMS--SIVPAYVR----------CEGISRKEGIHG 343

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            +IK GL      Q  L+ ++ +   +  + R+F+ + D+    ++T++  Y       D
Sbjct: 344 YVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSD 403

Query: 122 AVSFLIRMR-----------YDDVAPVVY--NYTYLLKV---CGDVGEIRRGKEIHGQLI 165
           A+  L  M+           Y+D   V +  N   L+ V   C  +  + +GKEIH   I
Sbjct: 404 ALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAI 463

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            N  +  +   + +V+MYAKCG +  A ++FD+MP R++++WN I+  +  +G  + +L+
Sbjct: 464 RNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLE 523

Query: 226 LVTRMHEEGRRG-----DFITIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTA 279
           L   M  EG +G       +T +++  + ++ G +  G ++ H      G +   +    
Sbjct: 524 LFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYAC 583

Query: 280 LVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAA 314
           +VD+  + G+VE A  + + M S    V +W+S++ A
Sbjct: 584 IVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGA 620



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 2/125 (1%)

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKC 489
           M      PD+F   +V+ A+A +  +   K IHA V +  +    +V +   L++MY KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +G A  +FD + ER   +WN +I         + A++ F  ML    +P+  T +   
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 550 SACSH 554
            ACS+
Sbjct: 121 LACSN 125


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 302/749 (40%), Positives = 449/749 (59%), Gaps = 50/749 (6%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           ++L  + K   +D A  F   + + DV    + +  ++      GE ++  +    + ++
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDV----FMWNIMVSGYTSKGEFKKALKCISDMKLS 285

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-----ERDLVSWNTIVAGFAQNGFAEL 222
           G   D      +++ YA+ GQ EEA K F  M      + ++VSW  ++AG  QNG+   
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALV 281
           AL +  +M  EG + + ITI S + A  N+  LR G+ +HGY ++    DS + V  +LV
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI-------------- 327
           D YAKC  VE AR  F  +K  ++VSWN+M+A Y   G+ EEA+ +              
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465

Query: 328 ---------------------FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK-- 364
                                FQ+M   G++P   TI  AL AC  + +L+ G  +H   
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L + ++L T V   ++LISMYS C  ++ A  +FS+L  + +V WN++I   AQ+GR   
Sbjct: 526 LRNHIELSTGVG--SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL+   +M   N++ ++ TMVS +PA ++L+ +R  K IH  +IR   +   F++ +LID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY +CG++  +R +FD+M +R + +WNVMI  YG HG G  AV LF +      KPN IT
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHIT 703

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F   +SACSHSGL+EEG  YF  +K +Y ++P ++ Y  MVDLL RAG+ NE  +FI+KM
Sbjct: 704 FTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 763

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P EP   V+G++LGAC+IH N +L E AA  LFEL+P   G +VL+ANIY+AA  W+  A
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAA 823

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           K+R +M+++G+ K PGCS +E+K ++HSF  G T HP  ++I   +E+L  +IK  GYVP
Sbjct: 824 KIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVP 883

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           DTN +  DV++  +E  L  HSEK+A+AFGL++++ G+ + I KNLRVCGDCH+ATK+IS
Sbjct: 884 DTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFIS 943

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            V  R+II+RD +RFH F +GVCSCGDYW
Sbjct: 944 KVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 245/522 (46%), Gaps = 80/522 (15%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           L++A   L  M   +    +  Y  +L+ C  +  +R G ++H QL+VNG  +  F  + 
Sbjct: 70  LNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSR 129

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           ++ +Y + G +E+A +MFD+M ER++ SW  I+  +   G  E  + L   M  EG R D
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
                 +  A + + + R+GK V+ Y +  GF+    V  +++DM+ KCGR++ AR  F+
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            ++ ++V  WN M++ Y   G  ++A++    M   GV+P  VT                
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT---------------- 293

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-----KTLVSWNAMI 413
                               N++IS Y++  + + A+  F ++ G       +VSW A+I
Sbjct: 294 -------------------WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCF 472
            G  QNG   EAL+ F KM  + +KP+S T+ S + A   LS++R+ + IH   I+    
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           + ++ V  +L+D YAKC +V  AR  F M+ +  + +WN M+ GY   G  + A+EL ++
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M                                    K  GIEP +  +  +V    + G
Sbjct: 455 M------------------------------------KFQGIEPDIITWNGLVTGFTQYG 478

Query: 593 RLNEAWDFIQK---MPIEPGITVFGAMLGACKIHKNVELGEK 631
               A +F Q+   M ++P  T     L AC   +N++LG++
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/666 (24%), Positives = 301/666 (45%), Gaps = 97/666 (14%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C  L  LR   ++   ++ +G+       ++L+ ++C+   + DA R+F+ + +
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  +++ Y      ++ +     M  + V P  + +  + K C ++   R GK++
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           +  ++  GF  +      +++M+ KCG+++ A + F+ +  +D+  WN +V+G+   G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + AL  ++ M   G + D +T                                     A+
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 281 VDMYAKCGRVETARLVF---DGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +  YA+ G+ E A   F    G+K    NVVSW ++IA   + G   EA+ +F+KM+ +G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGTDVSMTNSLISMYSKCKKVDRA 394
           V+P ++TI  A+ AC +L  L  G  +H    ++ +L +D+ + NSL+  Y+KC+ V+ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNE------------------------------ 424
              F  ++   LVSWNAM+ GYA  G   E                              
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 425 -----ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
                AL +F +M S  + P++ T+   + A  ++  ++  K IH  V+R+  E +  V 
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +ALI MY+ C ++  A ++F  ++ R V  WN +I      G    A++L  +M     +
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            N +T + A+ ACS    + +G  IH F       G++       +++D+ GR G + ++
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKS 654

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN-----RLFELDPDEGGYHVLLAN 652
                 MP +  +  +  M+    +H     G  A N     R   L P+    H+   N
Sbjct: 655 RRIFDLMP-QRDLVSWNVMISVYGMHG---FGMDAVNLFQQFRTMGLKPN----HITFTN 706

Query: 653 IYAAAS 658
           + +A S
Sbjct: 707 LLSACS 712



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 172/380 (45%), Gaps = 36/380 (9%)

Query: 299 GMKSRNVVSWNS-MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           G   RN V  N+ M+ + ++  NP+E + I+  +L +               C  L +L 
Sbjct: 62  GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQK---------------CRKLYNLR 106

Query: 358 RGIFVHKLLDQLKLGTDVS--MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            G  VH  L  +  G DV   + + L+ +Y +   V+ A  +F K+  + + SW A++  
Sbjct: 107 LGFQVHAQL--VVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y   G   E +  F  M ++ ++PD F    V  A +EL   R  K ++  ++   FE N
Sbjct: 165 YCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGN 224

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             V  +++DM+ KCG +  AR  F+ +  + V  WN+M+ GY + G  K A++  + M  
Sbjct: 225 SCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKL 284

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              KP+ +T+   IS  + SG  EE   YF  +      +P +  + A++    + G   
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDF 344

Query: 596 EAWDFIQKMPIE---PGITVFGAMLGACKIHKNVELGEKAAN---RLFELDPDEGGYHVL 649
           EA    +KM +E   P      + + AC     +  G +      ++ ELD D     +L
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD-----LL 399

Query: 650 LANIYAAASMWDKLAKVRTI 669
           + N     S+ D  AK R++
Sbjct: 400 VGN-----SLVDYYAKCRSV 414


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/767 (37%), Positives = 467/767 (60%), Gaps = 7/767 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           CT +   +++  L++ SG         KL++ +     +  A   F+ I  K    +++M
Sbjct: 53  CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSM 112

Query: 110 LKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +  YA+      AV  F   +    +    Y +  +++ CG++ +   G+++H  ++  G
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLG 169

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           F  D++     ++ Y++ G +  A  +FD M  RD+ +WN +++GF  NG    AL++  
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M  +    D +TI S+LP    +  +  G  +H YA++ G +  + V  AL++MYAK G
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFG 289

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            + +A  +F+ MK R++VSWNS++AA+ +   P  A+ ++ KM   GV P  +T++    
Sbjct: 290 ELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLAS 349

Query: 349 ACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
             A+LG+      +H  + +      D+++ N++I MY+K   +D A  +F  L  K ++
Sbjct: 350 VAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           SWN++I GY+QNG  NEA++ +  MR      P+  T VS++ A ++L  ++     H  
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQ 469

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +I++    ++FV T L+DMY KCG +  A +LF  +  +   +WN +I  +G HG G  A
Sbjct: 470 LIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKA 529

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           V+LF +M     KP+ ITF+  +SACSHSGLV+EG   F  +++ YGI P + HYG MVD
Sbjct: 530 VKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVD 589

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           L GRAG L +A++F++ MP+ P ++V+GA+LGAC+IH+NVEL    ++ L +++ +  GY
Sbjct: 590 LFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGY 649

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +VLL+NIYA    W+ + +VR++   +GL+KTPG S +E+  ++  FY+G+  HP+ + I
Sbjct: 650 YVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEI 709

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           Y+ L  L  ++K+ GYVPD N +  DVED  +EN+L+SHSE+LA+AFG++++ P +T+ I
Sbjct: 710 YSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQI 769

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVCGDCHNATK+IS +T REIIVRD +RFH FK+GVCSCGDYW
Sbjct: 770 FKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 257/498 (51%), Gaps = 16/498 (3%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSD 90
           +++ S  Y  P   ++  C +L + R++  L++K G  CD ++     +  + ++  +S 
Sbjct: 136 SFLQSDHYTFPP--VIRACGNLDDGRKVHCLVLKLGFECDVYI-AASFIHFYSRFGFVSL 192

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  +F+ +  +    ++ M+ G+     + +A+     MR+  V+      + LL +C  
Sbjct: 193 ACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQ 252

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +I  G  IH   I  G   DLF    ++NMYAK G++  A  +F++M  RD+VSWN++
Sbjct: 253 LDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSL 312

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM-RAG 269
           +A F QN    +AL +  +MH  G   D +T+VS+    A +G+    +++HG+   R  
Sbjct: 313 LAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCW 372

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           F   + +  A++DMYAK G +++AR VF+G+  ++V+SWNS+I  Y + G   EA+ ++ 
Sbjct: 373 FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS 432

Query: 330 KM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            M    G  P   T +  L A + LG L++G+  H  L +  L  D+ ++  L+ MY KC
Sbjct: 433 SMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC 492

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            K+  A  +F ++  ++ VSWNA+I  +  +G   +A+  F +M+S+ +KPD  T VS++
Sbjct: 493 GKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLL 552

Query: 449 PALAELSVIRYAKWIHALV-----IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
            A +   ++   +W   L+     IR   +        ++D++ + G +  A      M 
Sbjct: 553 SACSHSGLVDEGQWCFQLMQETYGIRPSLKH----YGCMVDLFGRAGHLEKAFNFVKNMP 608

Query: 504 ER-HVTTWNVMIDGYGTH 520
            R  V+ W  ++     H
Sbjct: 609 VRPDVSVWGALLGACRIH 626


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 285/772 (36%), Positives = 462/772 (59%), Gaps = 5/772 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C    SLK+ + +   I  +G        +KL  ++     L +A+RVF+ +  + 
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++   AK      ++    +M    V    Y ++ + K    +  +  G+++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ +GF         +V  Y K  +++ A K+FD M ERD++SWN+I+ G+  NG AE 
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +  +M   G   D  TIVS+    A+   + +G+AVH   ++A F         L+D
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KCG +++A+ VF  M  R+VVS+ SMIA Y   G   EA+++F++M ++G+ P   T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L+ CA    L+ G  VH+ + +  LG D+ ++N+L+ MY+KC  +  A  +FS+++
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYF-CKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            K ++SWN +I GY++N   NEAL+ F   +  K   PD  T+  V+PA A LS     +
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  ++R+ +  +  V  +L+DMYAKCGA+  A  LFD +  + + +W VMI GYG HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            GK A+ LFN+M +   + ++I+F+  + ACSHSGLV+EG  +F  ++ +  IEP ++HY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VD+L R G L +A+ FI+ MPI P  T++GA+L  C+IH +V+L EK A ++FEL+P
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GY+VL+ANIYA A  W+++ ++R  + ++GL+K PGCS +E+K  V+ F +G + +P
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +++ I  FL  +   +   GY P T  ++ D E+  +E  L  HSEKLA+A G+++S  G
Sbjct: 760 ETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLRVCGDCH   K++S +T REI++RD +RFH FK+G CSC  +W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 240/482 (49%), Gaps = 18/482 (3%)

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGK 259
           +R +   NT +  F ++G  E A+ L+      G+   D  T+ S+L   A+  SL+ GK
Sbjct: 58  DRSVTDANTQLRRFCESGNLENAVKLLCV---SGKWDIDPRTLCSVLQLCADSKSLKDGK 114

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            V  +    GF    N+ + L  MY  CG ++ A  VFD +K    + WN ++    + G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +   ++ +F+KM+  GVE  + T      + + L  +  G  +H  + +   G   S+ N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL++ Y K ++VD A  +F ++  + ++SWN++I GY  NG   + L+ F +M    I+ 
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  T+VSV    A+  +I   + +H++ +++CF +       L+DMY+KCG + +A+A+F
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M++R V ++  MI GY   GL   AV+LF +M E    P+  T    ++ C+   L++
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414

Query: 560 EGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI---TVFGA 615
           EG      +K+ D G +  + +  A++D+  + G + EA     +M ++  I   T+ G 
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472

Query: 616 MLGACKIHKNVELGEKAANRLFE---LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
               C  ++ + L     N L E     PDE     +L    A+ S +DK  ++   + +
Sbjct: 473 YSKNCYANEALSL----FNLLLEEKRFSPDERTVACVLPAC-ASLSAFDKGREIHGYIMR 527

Query: 673 KG 674
            G
Sbjct: 528 NG 529


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 294/726 (40%), Positives = 442/726 (60%), Gaps = 4/726 (0%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           + ++F+  P +  +  + +L  +++     +A++  + +R         + + +LKVCG 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   GK++H Q I  GF  D+   T +V+MY K   +E+  ++FD M  +++VSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +AG+ QNG  E AL L ++M  EG + +  T  ++L  +A  G++  G  VH   +++G 
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DS + V  ++V+MY+K   V  A+ VFD M++RN VSWNSMIA +V  G   EA  +F +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M  +GV+ T       +  CA++ ++     +H  + +     D+++  +L+  YSKC +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 391 VDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVI 448
           +D A  +F  + G + +VSW A+I GY QNGR + A+N FC+MR  + ++P+ FT  SV+
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404

Query: 449 PALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
            A A  +  +   K  H+  I+S F   + V +AL+ MYAK G + +A  +F    +R +
Sbjct: 405 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 464

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN MI GY  HG GK ++++F +M     + + ITF+  ISAC+H+GLV EG  YF  
Sbjct: 465 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 524

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + KDY I P M+HY  MVDL  RAG L +A D I KMP   G T++  +L AC++H NV+
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 584

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LGE AA +L  L P +   +VLL+NIYA A  W + AKVR +M+ K ++K  G S +E+K
Sbjct: 585 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK 644

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
           N+  SF +G   HPQS RIY  LE L   +K AGY PDT  + HDVE+  +E +LS HSE
Sbjct: 645 NKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSE 704

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           +LAIAFGL+ + PG+ I I KNLRVCGDCH   K IS + GR+I+VRD +RFH FK G C
Sbjct: 705 RLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSC 764

Query: 807 SCGDYW 812
           SCGDYW
Sbjct: 765 SCGDYW 770



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 268/542 (49%), Gaps = 27/542 (4%)

Query: 14  NSTPTQTLHEHKHTLSQRA-----------YIPSRIYRHPS-----ALLLEVCTSLKEL- 56
           + TP Q L  + H L + +           ++  R    P+     + +L+VC  L +  
Sbjct: 50  DETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRI 109

Query: 57  --RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
             +++    IK G  +     T LV ++ K  S+ D  RVF+ +  K    + ++L GY 
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYR 169

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +    + A+    +M+ + + P  + +  +L      G + +G ++H  +I +G    +F
Sbjct: 170 QNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               +VNMY+K   + +A  +FD M  R+ VSWN+++AGF  NG    A +L  RM  EG
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEG 289

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            +       +++   AN+  +   K +H   ++ G D  +N+ TAL+  Y+KC  ++ A 
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349

Query: 295 LVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHAC-A 351
            +F  M   +NVVSW ++I+ YV+ G  + AM +F +M  ++GVEP   T    L+AC A
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAA 409

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
               +E+G   H    +      + ++++L++MY+K   ++ A ++F +   + LVSWN+
Sbjct: 410 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 469

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI GYAQ+G   ++L  F +MRSKN++ D  T + VI A     ++   +    L+++  
Sbjct: 470 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 529

Query: 472 -FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH---GLGKAA 526
                +   + ++D+Y++ G +  A  L + M      T W  ++     H    LG+ A
Sbjct: 530 HIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 589

Query: 527 VE 528
            E
Sbjct: 590 AE 591


>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
 gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
          Length = 610

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/541 (51%), Positives = 380/541 (70%), Gaps = 10/541 (1%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           PV+  +T LLK+C    ++  G+ +H QL   G + +  A T + NMY KC +  +A ++
Sbjct: 57  PVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRV 116

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVG 253
           FDRMP RD V+WN +VAG+A+NG   LA++ V RM  E  G + D IT+VS+LPA A+  
Sbjct: 117 FDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADAR 176

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L   + VH +A+RAG D +VNVSTA++D Y KCG VE AR VFD M  RN VSWN+MI 
Sbjct: 177 VLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMID 236

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y E GN  EA+ +F +M+ +GV+ T+  ++ AL AC +LG L+    VH+LL ++ L +
Sbjct: 237 GYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKS 296

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +VS+ N+LI+ YSKCK+ D AA  F++L   KT +SWNAMILG+ QNG   +A   F +M
Sbjct: 297 NVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARM 356

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           + +N+KPDSFT+VSVIPA+A++S    A+WIH   IR   +++++V+TALIDMY+KCG V
Sbjct: 357 QLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRV 416

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             AR LFD   +RHV TWN MI GYG+HG G+ AVELF +M    + PN+ TFL  ++AC
Sbjct: 417 TIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAAC 476

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GLV+EG  YF S+ KDYG+EP M+HYG +VDLLGRAG+++EAW FIQ MPIEPGI+V
Sbjct: 477 SHAGLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISV 535

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GAMLGACK+HKNVEL E++A ++FEL P+EG     +      ASM ++LA+   I E+
Sbjct: 536 YGAMLGACKLHKNVELAEESAQKIFELGPEEGSLSQTM-----NASM-EELARCPGIGEQ 589

Query: 673 K 673
           K
Sbjct: 590 K 590



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 250/503 (49%), Gaps = 10/503 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C +  +L   R +   +   GL  + L  T L +++ K     DA RVF+ +P + 
Sbjct: 65  LLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPARD 124

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--PVVYNYTYLLKVCGDVGEIRRGKEI 160
              ++ ++ GYA+      A+  ++RM+ ++    P       +L  C D   +   +E+
Sbjct: 125 RVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACREV 184

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G    +   T V++ Y KCG +E A  +FD MP R+ VSWN ++ G+A+NG A
Sbjct: 185 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNA 244

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL L  RM +EG       +++ L A   +G L   + VH   +R G  S V+V  AL
Sbjct: 245 SEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNAL 304

Query: 281 VDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +  Y+KC R + A   F+  G+K +  +SWN+MI  + + G  E+A R+F +M  + V+P
Sbjct: 305 ITTYSKCKRADLAAHAFNELGIK-KTRISWNAMILGFTQNGCSEDAERLFARMQLENVKP 363

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            + T++  + A AD+ D  +  ++H    + +L  D+ +  +LI MYSKC +V  A  +F
Sbjct: 364 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLF 423

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
              + + +++WNAMI GY  +G    A+  F +M+     P+  T +SV+ A +   ++ 
Sbjct: 424 DSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 483

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGY 517
             +   A +     E  +     L+D+  + G V  A +    M  E  ++ +  M+   
Sbjct: 484 EGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGAMLGAC 543

Query: 518 GTHGLGKAAVELFNKMLE-GPTK 539
             H   + A E   K+ E GP +
Sbjct: 544 KLHKNVELAEESAQKIFELGPEE 566


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/806 (36%), Positives = 476/806 (59%), Gaps = 11/806 (1%)

Query: 13  TNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLC 69
           TN  P  +L  ++    + + IP      P   +L+ C  LK+ R    +  L IK G  
Sbjct: 193 TNGEPLGSLELYREM--RVSGIPLDACTFPC--ILKACGLLKDRRCGAEVHGLAIKEGYV 248

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIR 128
                   +V ++ K N L+ A ++F+ +P+K D + +++M+  Y+      +A+     
Sbjct: 249 SIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGE 308

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M+   +AP  Y +   L+ C D   I++G  IH  ++ + + +++F    ++ MYA+ G+
Sbjct: 309 MQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 368

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           + EA  +F  M + D +SWN++++GF QNG    AL     M + G++ D + ++SI+ A
Sbjct: 369 MGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 428

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            A  G+   G  +H YAM+ G DS + V  +LVDMYAK   ++    +FD M  ++VVSW
Sbjct: 429 SARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSW 488

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
            ++IA + + G+   A+ +F+++  +G++   + I   L AC+ L  +     +H  + +
Sbjct: 489 TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 548

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
             L +D+ + N ++ +Y +C  VD AA +F  ++ K +VSW +MI  Y  NG  NEAL  
Sbjct: 549 KGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALEL 607

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  M+   ++PDS ++VS++ A A LS ++  K IH  +IR  F     + + L+DMYA+
Sbjct: 608 FHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 667

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  +R +F+ +  + +  W  MI+ YG HG G+AA++LF +M +    P+ I F+  
Sbjct: 668 CGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAV 727

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           + ACSHSGL+ EG  +  S+K +Y +EP  +HY  +VDLLGRA  L EA+ F++ M +EP
Sbjct: 728 LYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEP 787

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              V+ A+LGAC+IH N ELGE AA +L E+DP+  G +VL++N+YAA   W  + +VR 
Sbjct: 788 TAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRM 847

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTN 727
            M+  GL+K PGCS +E+ N+VH+F +    HPQS  IY+ L  + +++ K  GYV  T 
Sbjct: 848 RMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTK 907

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + H+ ++  +  +L  HSE+LAIA+G+L +  G+++ I KNLRVCGDCHN  K IS   
Sbjct: 908 FVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFF 967

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            RE+++RD +RFH FK GVCSCGD W
Sbjct: 968 ERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 288/545 (52%), Gaps = 22/545 (4%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYN----YTYLLKVCGDVGEIRRGKEIHGQLI 165
           L+   K  S+++A   L  + + + +P  ++    Y+ +L++CG    +  G+++H  +I
Sbjct: 83  LREICKRGSVNEAFQSLTDL-FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 141

Query: 166 V-NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
             N     +F  T +V MY KCG + +A K+FD MP + + +WN ++  +  NG    +L
Sbjct: 142 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 201

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +L   M   G   D  T   IL A   +   R G  VHG A++ G+ SIV V+ ++V MY
Sbjct: 202 ELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMY 261

Query: 285 AKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
            KC  +  AR +FD M  + +VVSWNSMI+AY   G   EA+R+F +M    + P   T 
Sbjct: 262 TKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 321

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           + AL AC D   +++G+F+H  + +     +V + N+LI+MY++  K+  AA+IF  +  
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
              +SWN+M+ G+ QNG  +EAL ++ +MR    KPD   ++S+I A A          I
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           HA  +++  + ++ V  +L+DMYAK  ++     +FD M ++ V +W  +I G+  +G  
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSH 501

Query: 524 KAAVELFNKM-LEGPTKPNDITFLCAI-SACSHSGLVE--EGIHYFTSLKKDYGIEPVMD 579
             A+ELF ++ LEG     D+  + +I  ACS   L+   + IH +   K   G+  ++ 
Sbjct: 502 SRALELFREVQLEGIDL--DVMMISSILLACSGLKLISSVKEIHSYIIRK---GLSDLVL 556

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
             G +VD+ G  G ++ A    + +  +  +  + +M+ +C +H  +      A  LF L
Sbjct: 557 QNG-IVDVYGECGNVDYAARMFELIEFKD-VVSWTSMI-SCYVHNGL---ANEALELFHL 610

Query: 640 DPDEG 644
             + G
Sbjct: 611 MKETG 615


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/772 (38%), Positives = 468/772 (60%), Gaps = 12/772 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L   CT+L+  + +   ++ S          KLV+L+C   +++ A   F+ I ++    
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYA 119

Query: 106 YHTMLKGYAKFASLDDAV-SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ M+ GY +     + +  F + M    + P    +  +LK C +V +   G +IH   
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLA 176

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF  D++    ++++Y + G +  A  +FD MP RD+ SWN +++G+ Q+G A+ AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            L   +    R  D +T+VS+L A    G    G  +H Y+++ G +S + VS  L+D+Y
Sbjct: 237 TLSDGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A+ G ++  + VFD M  R+++SWNS+I AY     P  A+ +FQ+M    ++P  +T++
Sbjct: 293 AEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLI 352

Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
                 + LG++     V    L +     D+++ N+++ MY+K   VD A  +F+ L  
Sbjct: 353 SLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSK--NIKPDSFTMVSVIPALAELSVIRYAK 461
           K ++SWN +I GYAQNG  +EA+  +  M  +   I  +  T VSV+PA ++   +R   
Sbjct: 413 KDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGM 472

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H  ++++    +VFV T+L DMY KCG +  A +LF  +   +   WN +I  +G HG
Sbjct: 473 KLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHG 532

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G+ AV LF +ML+   KP+ ITF+  +SACSHSGLV+EG   F  ++ DYGI P + HY
Sbjct: 533 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY 592

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDL GRAG+L  A +FI+ MP++P  +++GA+L AC++H NV+LG+ A+  LFE++P
Sbjct: 593 GCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 652

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GYHVLL+N+YA+A  W+ + ++R+I   KGL+KTPG S +E+ N+V  FY+G+  HP
Sbjct: 653 EHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 712

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
             + +Y  L  L +++K  GYVPD   +  DVED  +E++L SHSE+LA+AF L+ +   
Sbjct: 713 MYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAK 772

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +TI I KNLRVCGDCH+ TK+IS +T REIIVRD +RFH FKNGVCSCGDYW
Sbjct: 773 TTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/806 (36%), Positives = 475/806 (58%), Gaps = 11/806 (1%)

Query: 13  TNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLC 69
           TN  P  +L  ++    + + IP      P   +L+ C  LK+ R    +  L IK G  
Sbjct: 157 TNGEPLGSLELYREM--RVSGIPLDACTFPC--ILKACGLLKDRRYGAEVHGLAIKEGYV 212

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIR 128
                   +V ++ K N L+ A ++F+ +P+K D + +++M+  Y+      +A+     
Sbjct: 213 SIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGE 272

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M+   +AP  Y +   L+ C D   I++G  IH  ++ + + +++F    ++ MYA+ G+
Sbjct: 273 MQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 332

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           + EA  +F  M + D +SWN++++GF QNG    AL     M + G++ D + ++SI+ A
Sbjct: 333 MGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 392

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            A  G+   G  +H YAM+ G DS + V  +LVDMYAK   ++    +FD M  ++VVSW
Sbjct: 393 SARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSW 452

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
            ++IA + + G+   A+ +F+++  +G++   + I   L AC+ L  +     +H  + +
Sbjct: 453 TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 512

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
             L +D+ + N ++ +Y +C  VD AA +F  ++ K +VSW +MI  Y  NG  NEAL  
Sbjct: 513 KGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALEL 571

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  M+   ++PDS ++VS++ A A LS ++  K IH  +IR  F     + + L+DMYA+
Sbjct: 572 FHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 631

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  +R +F+ +  + +  W  MI+ YG HG G+AA++LF +M +    P+ I F+  
Sbjct: 632 CGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAV 691

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           + ACSHSGL+ EG  +  S+K +Y +EP  +HY  +VDLLGRA  L EA+ F++ M +EP
Sbjct: 692 LYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEP 751

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              V+ A+LGAC+IH N ELGE AA +L E+DP+  G +VL++N+Y+A   W  +  VR 
Sbjct: 752 TAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRM 811

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTN 727
            M+  GL+K PGCS +E+ N+VH+F +    HPQS  IY+ L  + +++ K  GYV  T 
Sbjct: 812 RMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTK 871

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + H+ ++  +  +L  HSE+LAIA+G+L +  G+++ I KNLRVCGDCHN  K IS   
Sbjct: 872 FVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFF 931

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            RE+++RD +RFH FK GVCSCGD W
Sbjct: 932 ERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 289/545 (53%), Gaps = 22/545 (4%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYN----YTYLLKVCGDVGEIRRGKEIHGQLI 165
           L+   K  S+++A   L  + + + +P  ++    Y+ +L++CG    +  G+++H  +I
Sbjct: 47  LREICKRGSVNEAFQSLTDL-FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 105

Query: 166 V-NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
             N     +F  T +V MY KCG + +A K+FD MP + + +WN ++  +  NG    +L
Sbjct: 106 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 165

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +L   M   G   D  T   IL A   +   R G  VHG A++ G+ SIV V+ ++V MY
Sbjct: 166 ELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMY 225

Query: 285 AKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
            KC  +  AR +FD M  + +VVSWNSMI+AY   G   EA+R+F +M    + P   T 
Sbjct: 226 TKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 285

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           + AL AC D   +++G+F+H  + +     +V + N+LI+MY++  K+  AA+IF  +  
Sbjct: 286 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
              +SWN+M+ G+ QNG  +EAL ++ +MR    KPD   ++S+I A A      +   I
Sbjct: 346 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           HA  +++  + ++ V  +L+DMYAK  ++     +FD M ++ V +W  +I G+  +G  
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSH 465

Query: 524 KAAVELFNKM-LEGPTKPNDITFLCAI-SACSHSGLVE--EGIHYFTSLKKDYGIEPVMD 579
             A+ELF ++ LEG     D+  + +I  ACS   L+   + IH +   K   G+  ++ 
Sbjct: 466 SRALELFREVQLEGIDL--DVMMISSILLACSGLKLISSVKEIHSYIIRK---GLSDLVL 520

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
             G +VD+ G  G ++ A    + +  +  +  + +M+ +C +H  +      A  LF L
Sbjct: 521 QNG-IVDVYGECGNVDYAARMFELIEFKD-VVSWTSMI-SCYVHNGL---ANEALELFHL 574

Query: 640 DPDEG 644
             + G
Sbjct: 575 MKETG 579


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/777 (37%), Positives = 466/777 (59%), Gaps = 37/777 (4%)

Query: 71  QHLFQT-KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK------------------ 111
           + ++QT +L++   K   ++DA ++F+ +P K +  ++TM+                   
Sbjct: 63  ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122

Query: 112 -------------GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
                        GY KF    +A      MR +      +    +L+VC  +G I+ G+
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNTIVAGFAQ 216
            IHG ++ NGF  ++F +TG+V+MYAKC  + EA  +F       ++ V W  +V G+AQ
Sbjct: 183 MIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQ 242

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    A++    MH +G   +  T  +IL A ++V +   G+ VHG+ +++GF S V V
Sbjct: 243 NGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYV 302

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +ALVDMYAKCG ++ A+ + + M+  +VVSWNS++  +V  G  EEA+R+F+ M  + +
Sbjct: 303 QSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +  + T    L+ C  +G +     VH L+ +        ++N+L+ MY+K   +D A  
Sbjct: 363 KIDDYTFPSVLNCCV-VGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYT 420

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F K+  K ++SW +++ GYAQN    E+L  FC MR   + PD F + S++ A AEL++
Sbjct: 421 VFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTL 480

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           + + K +H   I+S    +  V  +L+ MYAKCG +  A A+F  M  + V TW  +I G
Sbjct: 481 LEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVG 540

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  +G G+ +++ ++ M+   T+P+ ITF+  + ACSH+GLV+EG  YF  + K YGI+P
Sbjct: 541 YAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKP 600

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
             +HY  M+DL GR+G+L+EA   + +M ++P  TV+ ++L AC++H+N+EL E+AA  L
Sbjct: 601 GPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNL 660

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           FEL+P     +V+L+N+Y+A+  W+ +AK+R +M+ KG+ K PGCS +E+ + V++F S 
Sbjct: 661 FELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISD 720

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLL 755
              HP+   IYT ++ +I  IK AGYVPD + S+HD++   +E  L+ HSEKLA+AFGLL
Sbjct: 721 DRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLL 780

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + P + I I KNLRVCGDCH+A KYIS V  R II+RD + FH F+ G CSCGDYW
Sbjct: 781 AAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/753 (39%), Positives = 453/753 (60%), Gaps = 19/753 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+L+ K        +VF+ I ++    +++++     F   + A+     M  +DV P 
Sbjct: 135 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPS 194

Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    +   C +      +  GK++H   +  G  L+ F +  +V MY K G++  +  
Sbjct: 195 SFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKV 253

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +      RDLV+WNT+++   QN     AL+ +  M  EG   D  TI S+LPA +++  
Sbjct: 254 LLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM 313

Query: 255 LRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           LR GK +H YA++ G  D    V +ALVDMY  C +V +   VFDGM  R +  WN+MI 
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373

Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y +    EEA+ +F +M +  G+   + T+   + AC   G   +   +H  + +  L 
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLD 433

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + N+L+ MYS+  K+D A  IF K++ + LV+WN +I GY  + R  +AL    KM
Sbjct: 434 RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKM 493

Query: 433 R-----------SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           +             ++KP+S T+++++P+ A LS +   K IHA  I++    +V V +A
Sbjct: 494 QILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 553

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAKCG +  +R +FD +  R+V TWNV++  YG HG  + A+++   M+    KPN
Sbjct: 554 LVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPN 613

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           ++TF+   +ACSHSG+V EG+  F ++KKDYG+EP  DHY  +VDLLGRAGR+ EA+  I
Sbjct: 614 EVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLI 673

Query: 602 QKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
             +P        + ++LGAC+IH N+E+GE AA  L +L+P+   ++VLLANIY++A +W
Sbjct: 674 NLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 733

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            K  +VR  M+ +G++K PGCS +E  +EVH F +G + HPQS+++  +LETL + ++  
Sbjct: 734 YKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKE 793

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GY+PDT+ + H+VE+  +E LL  HSEKLAIAFG+LN+SPG+ I + KNLRVC DCH AT
Sbjct: 794 GYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 853

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS V  REII+RD+ RFH FKNG CSCGDYW
Sbjct: 854 KFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 280/563 (49%), Gaps = 30/563 (5%)

Query: 90  DAARVFEPIPDKLDALYHT------MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           D A      P K  +  H+      +L+   +   L +AV   I M    + P  + +  
Sbjct: 39  DVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPA 98

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPER 202
           LLK   D+ ++  GK+IH  +   G+ +D   +   +VN+Y KCG     YK+FDR+ ER
Sbjct: 99  LLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 158

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG---SLRIGK 259
           + VSWN++++        E+AL+    M +E       T+VS+  A +N      L +GK
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGK 218

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH Y +R G  +   ++T LV MY K G++ +++++    + R++V+WN+++++  +  
Sbjct: 219 QVHAYGLRKGELNSFIINT-LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMT 378
              EA+   ++M+ +GVEP   TI   L AC+ L  L  G  +H   L    L  +  + 
Sbjct: 278 QFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 337

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNI 437
           ++L+ MY  CK+V     +F  +  + +  WNAMI GYAQN    EAL  F +M  S  +
Sbjct: 338 SALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGL 397

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
             +S TM  V+PA          + IH  V++   +++ FV  AL+DMY++ G +  A+ 
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKR 457

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM--LEGPT---------KPNDITFL 546
           +F  M +R + TWN +I GY      + A+ + +KM  LE            KPN IT +
Sbjct: 458 IFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLM 517

Query: 547 CAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
             + +C+    + +G  IH + ++K +   +  +    A+VD+  + G L  +     ++
Sbjct: 518 TILPSCAALSALAKGKEIHAY-AIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQI 574

Query: 605 PIEPGITVFGAMLGACKIHKNVE 627
           PI   IT +  ++ A  +H N +
Sbjct: 575 PIRNVIT-WNVIVMAYGMHGNSQ 596



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 137/269 (50%), Gaps = 18/269 (6%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K GL      Q  L+ ++ +   +  A R+F  + D+    ++T++ GY      +D
Sbjct: 426 FVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHED 485

Query: 122 AVSFLIRMRYDD-----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           A+  L +M+  +           + P       +L  C  +  + +GKEIH   I N  +
Sbjct: 486 ALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 545

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+   + +V+MYAKCG ++ + K+FD++P R++++WN IV  +  +G ++ A+D++  M
Sbjct: 546 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMM 605

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCG 288
             +G + + +T +S+  A ++ G +  G  +  Y M+   G +   +    +VD+  + G
Sbjct: 606 MVQGVKPNEVTFISVFAACSHSGMVNEGLKIF-YNMKKDYGVEPSSDHYACVVDLLGRAG 664

Query: 289 RVETARLVFDGMKSRN---VVSWNSMIAA 314
           RV+ A  + + +  RN     +W+S++ A
Sbjct: 665 RVKEAYQLIN-LIPRNFDKAGAWSSLLGA 692



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 11  VFTNSTPTQTLHEHKHTLSQR--AYIPSRIYRHPSAL----LLEVCTSLKEL---RRILP 61
           VF+       L  HK  + +R  +   SR+   P+++    +L  C +L  L   + I  
Sbjct: 478 VFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 537

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
             IK+ L       + LV ++ K   L  + +VF+ IP +    ++ ++  Y    +  D
Sbjct: 538 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQD 597

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVV 180
           A+  L  M    V P    +  +   C   G +  G +I   +  + G          VV
Sbjct: 598 AIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657

Query: 181 NMYAKCGQIEEAYKMFDRMP 200
           ++  + G+++EAY++ + +P
Sbjct: 658 DLLGRAGRVKEAYQLINLIP 677


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 288/778 (37%), Positives = 456/778 (58%), Gaps = 6/778 (0%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           +  PS  +L+ C+  ++L   R++  + + +G          LV ++ K   L D+ R+F
Sbjct: 83  FTFPS--VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLF 140

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
             I ++    ++ +   Y +     +AV     M    + P  ++ + +L  C  + E  
Sbjct: 141 GGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGD 200

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            G++IHG ++  G  LD F+   +V+MY+K G+IE A  +F  +   D+VSWN I+AG  
Sbjct: 201 LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCV 260

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            +   +LAL L+  M   G R +  T+ S L A A +G   +G+ +H   ++    S + 
Sbjct: 261 LHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLF 320

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
            +  LVDMY+KC  ++ AR  +D M  +++++WN++I+ Y + G+  +A+ +F KM  + 
Sbjct: 321 AAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED 380

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++    T+   L + A L  ++    +H +  +  + +D  + NSL+  Y KC  +D A+
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS 440

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF +   + LV++ +MI  Y+Q G   EAL  + +M+  +IKPD F   S++ A A LS
Sbjct: 441 KIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLS 500

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                K +H   I+  F  ++F   +L++MYAKCG++  A   F  +  R + +W+ MI 
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIG 560

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GY  HG GK A+ LFN+ML     PN IT +  + AC+H+GLV EG  YF  ++  +GI+
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIK 620

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P  +HY  M+DLLGR+G+LNEA + +  +P E    V+GA+LGA +IHKN+ELG+KAA  
Sbjct: 621 PTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKM 680

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           LF+L+P++ G HVLLANIYA+A MW+ +AKVR  M+   ++K PG S +E+K++V++F  
Sbjct: 681 LFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIV 740

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   H +S  IY  L+ L D +  AGY       IH+V+   +E LL  HSEKLA+AFGL
Sbjct: 741 GDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGL 800

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + PG  I ++KNLR+C DCH   K++  +  REIIVRD++RFH FK+G CSCGDYW
Sbjct: 801 IATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/578 (28%), Positives = 296/578 (51%), Gaps = 12/578 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDD 121
           +IK G       +  LV+L+ K      A ++ +    +LD + + ++L GY +   +++
Sbjct: 7   LIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDE-SSELDVVSWSSLLSGYVQNGFVEE 65

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+     M    V    + +  +LK C    ++  G+++HG  +V GF  D F    +V 
Sbjct: 66  ALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVV 125

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MYAKCG ++++ ++F  + ER++VSWN + + + Q+     A+ L   M   G   +  +
Sbjct: 126 MYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFS 185

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  IL A A +    +G+ +HG  ++ G D     + ALVDMY+K G +E A  VF  + 
Sbjct: 186 ISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA 245

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VVSWN++IA  V     + A+ +  +M   G  P   T+  AL ACA +G  E G  
Sbjct: 246 HPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQ 305

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H  L ++   +D+     L+ MYSKC+ +D A   +  +  K +++WNA+I GY+Q G 
Sbjct: 306 LHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGD 365

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             +A++ F KM S++I  +  T+ +V+ ++A L  I+  K IH + I+S    + +V+ +
Sbjct: 366 HLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS 425

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+D Y KC  +  A  +F+      +  +  MI  Y  +G G+ A++L+ +M +   KP+
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPD 485

Query: 542 DITFLCA--ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
              F+C+  ++AC++    E+G        K +G    +    ++V++  + G + +A  
Sbjct: 486 --PFICSSLLNACANLSAYEQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADR 542

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
              ++P   GI  + AM+G    H +     K A RLF
Sbjct: 543 AFSEIP-NRGIVSWSAMIGGYAQHGH----GKEALRLF 575



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 230/435 (52%), Gaps = 16/435 (3%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           E+H  LI  GFS D      +V +Y+KC +   A K+ D   E D+VSW+++++G+ QNG
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           F E AL +   M   G + +  T  S+L A +    L +G+ VHG A+  GF+S   V+ 
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            LV MYAKCG ++ +R +F G+  RNVVSWN++ + YV+     EA+ +F++M+  G+ P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
              +I   L+ACA L + + G  +H L+ ++ L  D    N+L+ MYSK  +++ A  +F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             +    +VSWNA+I G   +   + AL    +M+    +P+ FT+ S + A A +    
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + +H+ +I+     ++F    L+DMY+KC  +  AR  +D M ++ +  WN +I GY 
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITF---------LCAISACS--HSGLVEEGIHYFTS 567
             G    AV LF+KM       N  T          L AI  C   H+  ++ GI+    
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY---- 417

Query: 568 LKKDYGIEPVMDHYG 582
               Y I  ++D YG
Sbjct: 418 -SDFYVINSLLDTYG 431


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/792 (37%), Positives = 458/792 (57%), Gaps = 50/792 (6%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L ++R++       G+ +  +   KL+  +  Y +L DA  +F+ +  +    +  M
Sbjct: 91  CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVM 150

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G+AK     +       +      P  Y   ++++ C D+  ++              
Sbjct: 151 VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ-------------- 196

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
                    +V+MY KC +IE+A  +FD+M ERDLV+W  ++ G+A+ G A  +L L  +
Sbjct: 197 -------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 249

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M EEG   D + +V+++ A A +G++   + +  Y  R  F   V + TA++DMYAKCG 
Sbjct: 250 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 309

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           VE+AR +FD M+ +NV+SW++MIAAY   G   +A+ +F+ ML  G+ P  +T+   L+A
Sbjct: 310 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 369

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C +  +L +   VH       +  ++ + N L+  YS  + +D A  +F  +  +  VSW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429

Query: 410 NAMILGYAQ----------------------------NGRVNEALNYFCKMRSKNIKPDS 441
           + M+ G+A+                             G  NE+L  F KMR + + PD 
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
             MV+V+ A A+L  +  A+ I   + R  F+ +V + TA+IDM+AKCG V +AR +FD 
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M E++V +W+ MI  YG HG G+ A++LF  ML     PN IT +  + ACSH+GLVEEG
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           + +F+ + +DY +   + HY  +VDLLGRAGRL+EA   I+ M +E    ++GA LGAC+
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
            HK+V L EKAA  L EL P   G+++LL+NIYA A  W+ +AK R +M ++ L+K PG 
Sbjct: 670 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 729

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           + +E+ N+ H F  G T HP+SK IY  L++L ++++  GYVPDTN + HDV++ ++  +
Sbjct: 730 TWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGI 789

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L SHSEKLAIAFGL+ +   + I I KNLRVCGDCH   K +S +TGR IIVRD +RFH 
Sbjct: 790 LYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHH 849

Query: 801 FKNGVCSCGDYW 812
           FK G CSCGDYW
Sbjct: 850 FKEGACSCGDYW 861



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 183/346 (52%), Gaps = 25/346 (7%)

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS---ILPAVANVGSLRIGKAVHGYAM 266
           IV    +  F + +L+L  R  EE  +  F+  ++    + A+ N  +L   + VH  A 
Sbjct: 47  IVESIIETQFRQTSLNLHNR-EEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQAS 105

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
             G    + V+  L+  Y+    ++ A  +FDGM  R+ VSW+ M+  + + G+      
Sbjct: 106 VHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFG 165

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
            F++++  G  P N T+   + AC DL +L+                      +L+ MY 
Sbjct: 166 TFRELIRCGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYV 204

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC++++ A  +F K+Q + LV+W  MI GYA+ G+ NE+L  F KMR + + PD   MV+
Sbjct: 205 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 264

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A A+L  +  A+ I   + R  F+ +V + TA+IDMYAKCG V +AR +FD M E++
Sbjct: 265 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 324

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           V +W+ MI  YG HG G+ A++LF  ML     P+ IT    + AC
Sbjct: 325 VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/780 (38%), Positives = 461/780 (59%), Gaps = 11/780 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++LL+ C   +     + +   +++SGL    +    L+SL+ K      A  +FE + +
Sbjct: 30  SILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN 89

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K D + +  M+  +A  +    A+   + M      P  Y +  +++ C +      G+ 
Sbjct: 90  KRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEI 149

Query: 160 IHGQLIVNGF-SLDLFAMTGVVNMYAK-CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           I+G ++  G+   D+     +++M+ K  G +  AYK+FD+MPER+LV+W  ++  FAQ 
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 209

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G A  A+DL   M   G   D  T  S+L A   +G L +GK +H   +R G    V V 
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269

Query: 278 TALVDMYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLD 333
            +LVDMYAKC   G V+ +R VF+ M   NV+SW ++I AYV+ G   +EA+ +F KM+ 
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             + P + +    L AC +L D   G  V+    +L + +   + NSLISMY++  +++ 
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 389

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A   F  L  K LVS+NA++ GYA+N +  EA   F ++    I   +FT  S++   A 
Sbjct: 390 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 449

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           +  +   + IH  +++  ++ N  +  ALI MY++CG +  A  +F+ M +R+V +W  M
Sbjct: 450 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 509

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I G+  HG    A+E+F+KMLE  TKPN+IT++  +SACSH G++ EG  +F S+ K++G
Sbjct: 510 ITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 569

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I P M+HY  MVDLLGR+G L EA +FI  MP+     V+  +LGAC++H N ELG  AA
Sbjct: 570 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 629

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
             + E +PD+   ++LL+N++A+A  W  + K+R  M+++ L K  GCS +E++N VH F
Sbjct: 630 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 689

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAF 752
           + G T HPQ+ +IY  L+ L  +IK  GY+PDT+ + HD+E+  +E  L  HSEK+A+AF
Sbjct: 690 HVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAF 749

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GL+++S    I I KNLRVCGDCH A KYIS+ TGREI+VRD +RFH  KNGVCSC DYW
Sbjct: 750 GLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 261/530 (49%), Gaps = 18/530 (3%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           L  A S L  M   +  P +  Y+ LLK C      + GK +H +L+ +G  LD   +  
Sbjct: 7   LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66

Query: 179 VVNMYAKCGQIEEAYKMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
           ++++Y+KCG  E A  +F+ M  +RDLVSW+ +V+ FA N     A+     M E G   
Sbjct: 67  LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVSTALVDMYAK-CGRVETARL 295
           +     +++ A +N     +G+ ++G+ ++ G+ ++ V V   L+DM+ K  G + +A  
Sbjct: 127 NEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYK 186

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VFD M  RN+V+W  MI  + + G   +A+ +F  M   G  P   T    L AC +LG 
Sbjct: 187 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK---KVDRAADIFSKLQGKTLVSWNAM 412
           L  G  +H  + +L L  DV +  SL+ MY+KC     VD +  +F ++    ++SW A+
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306

Query: 413 ILGYAQNGRVN-EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           I  Y Q+G  + EA+  FCKM S +I+P+ F+  SV+ A   LS     + +++  ++  
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
                 V  +LI MYA+ G +  AR  FD++ E+++ ++N ++DGY  +   + A  LFN
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 426

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           ++ +     +  TF   +S  +  G + +G      L K  G +       A++ +  R 
Sbjct: 427 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRC 485

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACK----------IHKNVELGEK 631
           G +  A+    +M     I+    + G  K           HK +E G K
Sbjct: 486 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 535



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 3/246 (1%)

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G    A      M  Q   P   T    L +C    + + G  VH+ L Q  L  D  + 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           N+LIS+YSKC   + A  IF  +  K  LVSW+AM+  +A N    +A+  F  M     
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF-EKNVFVMTALIDMYAK-CGAVGTA 495
            P+ +   +VI A +  +     + I+  V+++ + E +V V   LIDM+ K  G +G+A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +FD M ER++ TW +MI  +   G  + A++LF  M      P+  T+   +SAC+  
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244

Query: 556 GLVEEG 561
           GL+  G
Sbjct: 245 GLLALG 250



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 20/279 (7%)

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR++ A +    M  +N  PD  T   ++ +       +  K +H  +++S  E +  V+
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 480 TALIDMYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             LI +Y+KCG   TAR +F+ M N+R + +W+ M+  +  + +   A+  F  MLE   
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 539 KPNDITFLCAISACSHSGLVEEG-IHYFTSLKKDYGIEPVMDHYGAMVDLLGR-AGRLNE 596
            PN+  F   I ACS++     G I Y   +K  Y +E  +     ++D+  + +G L  
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGS 183

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELG-EKAANRLFELDPDEGGY---HVLLAN 652
           A+    KMP E  +  +  M     I +  +LG  + A  LF LD +  GY       ++
Sbjct: 184 AYKVFDKMP-ERNLVTWTLM-----ITRFAQLGCARDAIDLF-LDMELSGYVPDRFTYSS 236

Query: 653 IYAAASMWDKLA-----KVRTIMEKKGLQKTPGCSLVEL 686
           + +A +    LA       R I     L    GCSLV++
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/780 (38%), Positives = 461/780 (59%), Gaps = 11/780 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++LL+ C   +     + +   +++SGL    +    L+SL+ K      A  +FE + +
Sbjct: 48  SILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN 107

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K D + +  M+  +A  +    A+   + M      P  Y +  +++ C +      G+ 
Sbjct: 108 KRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEI 167

Query: 160 IHGQLIVNGF-SLDLFAMTGVVNMYAK-CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           I+G ++  G+   D+     +++M+ K  G +  AYK+FD+MPER+LV+W  ++  FAQ 
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 227

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G A  A+DL   M   G   D  T  S+L A   +G L +GK +H   +R G    V V 
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287

Query: 278 TALVDMYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLD 333
            +LVDMYAKC   G V+ +R VF+ M   NV+SW ++I AYV+ G   +EA+ +F KM+ 
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             + P + +    L AC +L D   G  V+    +L + +   + NSLISMY++  +++ 
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 407

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A   F  L  K LVS+NA++ GYA+N +  EA   F ++    I   +FT  S++   A 
Sbjct: 408 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 467

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           +  +   + IH  +++  ++ N  +  ALI MY++CG +  A  +F+ M +R+V +W  M
Sbjct: 468 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 527

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I G+  HG    A+E+F+KMLE  TKPN+IT++  +SACSH G++ EG  +F S+ K++G
Sbjct: 528 ITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 587

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I P M+HY  MVDLLGR+G L EA +FI  MP+     V+  +LGAC++H N ELG  AA
Sbjct: 588 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 647

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
             + E +PD+   ++LL+N++A+A  W  + K+R  M+++ L K  GCS +E++N VH F
Sbjct: 648 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 707

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAF 752
           + G T HPQ+ +IY  L+ L  +IK  GY+PDT+ + HD+E+  +E  L  HSEK+A+AF
Sbjct: 708 HVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAF 767

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GL+++S    I I KNLRVCGDCH A KYIS+ TGREI+VRD +RFH  KNGVCSC DYW
Sbjct: 768 GLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 271/562 (48%), Gaps = 26/562 (4%)

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           SLS     FEP+ ++L                L  A S L  M   +  P +  Y+ LLK
Sbjct: 1   SLSLKNPNFEPLKNRLIRQLDV--------GRLHHAFSTLDLMTQQNAPPDLTTYSILLK 52

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PERDLV 205
            C      + GK +H +L+ +G  LD   +  ++++Y+KCG  E A  +F+ M  +RDLV
Sbjct: 53  SCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLV 112

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW+ +V+ FA N     A+     M E G   +     +++ A +N     +G+ ++G+ 
Sbjct: 113 SWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFV 172

Query: 266 MRAGF-DSIVNVSTALVDMYAK-CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           ++ G+ ++ V V   L+DM+ K  G + +A  VFD M  RN+V+W  MI  + + G   +
Sbjct: 173 VKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 232

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F  M   G  P   T    L AC +LG L  G  +H  + +L L  DV +  SL+ 
Sbjct: 233 AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVD 292

Query: 384 MYSKCK---KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN-EALNYFCKMRSKNIKP 439
           MY+KC     VD +  +F ++    ++SW A+I  Y Q+G  + EA+  FCKM S +I+P
Sbjct: 293 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRP 352

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           + F+  SV+ A   LS     + +++  ++        V  +LI MYA+ G +  AR  F
Sbjct: 353 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 412

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D++ E+++ ++N ++DGY  +   + A  LFN++ +     +  TF   +S  +  G + 
Sbjct: 413 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 472

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           +G      L K  G +       A++ +  R G +  A+    +M     I+    + G 
Sbjct: 473 KGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 531

Query: 620 CK----------IHKNVELGEK 631
            K           HK +E G K
Sbjct: 532 AKHGFATRALEMFHKMLETGTK 553



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 20/279 (7%)

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR++ A +    M  +N  PD  T   ++ +       +  K +H  +++S  E +  V+
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 480 TALIDMYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             LI +Y+KCG   TAR +F+ M N+R + +W+ M+  +  + +   A+  F  MLE   
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 539 KPNDITFLCAISACSHSGLVEEG-IHYFTSLKKDYGIEPVMDHYGAMVDLLGR-AGRLNE 596
            PN+  F   I ACS++     G I Y   +K  Y +E  +     ++D+  + +G L  
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGS 201

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELG-EKAANRLFELDPDEGGY---HVLLAN 652
           A+    KMP E  +  +  M     I +  +LG  + A  LF LD +  GY       ++
Sbjct: 202 AYKVFDKMP-ERNLVTWTLM-----ITRFAQLGCARDAIDLF-LDMELSGYVPDRFTYSS 254

Query: 653 IYAAASMWDKLA-----KVRTIMEKKGLQKTPGCSLVEL 686
           + +A +    LA       R I     L    GCSLV++
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/753 (39%), Positives = 450/753 (59%), Gaps = 5/753 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           IIK G C        L++ + KY+SL DAA++F+ +PD+    + T+++GY++     +A
Sbjct: 70  IIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEA 129

Query: 123 VSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +    R++ +  ++ P V++    L V  +  ++  G  +H  +   GF  D F  T ++
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKL--GFSVHACVYKLGFDSDAFVGTALI 187

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           + Y+ CG  E A ++FD +  +D+VSW  +VA + +N   E +L L +RM   G + +  
Sbjct: 188 DCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNF 247

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  S+L A   +    +GKAVHG A +  +   + V   L+D+Y K G V+ A  VF+ M
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM 307

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +V+ W+ MIA Y +    EEA+ +F +M    V P   T+   L ACA L DL+ G 
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + ++ L  +V ++N+L+ MY+KC +++ +  +FS+    T VSWN +I+GY Q G
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +AL  F  M    ++    T  SV+ A A ++ +     IH+L +++ ++KN  V  
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           ALIDMYAKCG +  AR +FDM+ E    +WN MI GY  HGL   A++ F  MLE   KP
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKP 547

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + +TF+  +SACS++GL++ G  YF S+ ++Y IEP  +HY  MV LLGR+G L++A   
Sbjct: 548 DKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKL 607

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           + ++P EP + V+ A+L AC IH +VELG  +A R+ E++P++   HVLL+NIYA A  W
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRW 667

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             +A +RT M++KG++K PG S +E +  VH F  G T HP +K I   LE L  + +  
Sbjct: 668 GNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNE 727

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPD +S+  DVED  +E  L  HSE+LA+A+GL+ +   S + I KNLR+C DCH A 
Sbjct: 728 GYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAI 787

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K IS +  R+II+RDM+RFH F  G+CSCGDYW
Sbjct: 788 KLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 164/504 (32%), Positives = 261/504 (51%), Gaps = 9/504 (1%)

Query: 124 SFLIRMRYDDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           SFL + R    +P    Y Y  LL+ C   G+   GK +H ++I  G  LDLFA   ++N
Sbjct: 29  SFLAQ-RTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
            Y K   + +A K+FD MP+R+ VS+ T++ G++Q      A+ L +R+  EG   +   
Sbjct: 88  FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             ++L  + +    ++G +VH    + GFDS   V TAL+D Y+ CG  E AR VFD ++
Sbjct: 148 FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE 207

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            +++VSW  M+A YVE    EE++++F +M   G +P N T    L AC  L     G  
Sbjct: 208 YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKA 267

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH    +     ++ +   LI +Y K   VD A  +F ++    ++ W+ MI  YAQ+ +
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             EA+  FC+MR   + P+ FT+ S++ A A L  ++    IH  V++   + NVFV  A
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAKCG +  +  LF         +WN +I GY   G G+ A+ LF  MLE   +  
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447

Query: 542 DITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           ++T+   + AC+    +E G  IH   S+K  Y    V+ +  A++D+  + G + +A  
Sbjct: 448 EVTYSSVLRACAGIAALEPGSQIHSL-SVKTIYDKNTVVGN--ALIDMYAKCGNIKDA-R 503

Query: 600 FIQKMPIEPGITVFGAMLGACKIH 623
            +  M  E     + AM+    +H
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVH 527


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 293/790 (37%), Positives = 452/790 (57%), Gaps = 8/790 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           +    +IP++I       +L  C S  EL   ++I   IIK+G       Q  L+S++ K
Sbjct: 119 MQNAGFIPNKI---TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGK 175

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              L  A +VF  I  +    Y+TML  YA+ A + + +    +M  + ++P    Y  L
Sbjct: 176 CGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINL 235

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L        +  GK IH   +  G + D+   T +V M  +CG ++ A + F  + +RD+
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV 295

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           V +N ++A  AQ+G    A +   RM  +G   +  T +SIL A +   +L  GK +H +
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSH 355

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
               G  S V +  AL+ MYA+CG +  AR +F  M  R+++SWN++IA Y    +  EA
Sbjct: 356 ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           MR++++M  +GV+P  VT +  L ACA+      G  +H+ + +  + ++  + N+L++M
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNM 475

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y +C  +  A ++F   Q + ++SWN+MI G+AQ+G    A   F +M+++ ++PD+ T 
Sbjct: 476 YRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITF 535

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            SV+        +   K IH  +  S  + +V +  ALI+MY +CG++  AR +F  +  
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH 595

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGIH 563
           R V +W  MI G    G    A+ELF +M  EG   P+  TF   +SAC+H+GLV EG  
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQ 655

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F+S++ +YG+ P ++HYG +V LLGRA R  EA   I +MP  P   V+  +LGAC+IH
Sbjct: 656 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 715

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
            N+ L E AAN   +L+      ++LL+N+YAAA  WD +AK+R +ME +G++K PG S 
Sbjct: 716 GNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 775

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           +E+ N +H F +    HP++  IY  L+ L  E++ AGY PDT  + HD+    QE  L 
Sbjct: 776 IEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLC 835

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
           +HSE+LAIA+GL+ + PG+ I I KNLR+CGDCH A+K+IS + GREII RD +RFH FK
Sbjct: 836 THSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFK 895

Query: 803 NGVCSCGDYW 812
           NG CSC DYW
Sbjct: 896 NGKCSCEDYW 905



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 182/624 (29%), Positives = 320/624 (51%), Gaps = 10/624 (1%)

Query: 35  PSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P+   R     LL+ CT    L E +RI   ++++G+         L++++ K  S+ DA
Sbjct: 22  PTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDA 81

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ +P +    +++++  YA+      A      M+     P    Y  +L  C   
Sbjct: 82  HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E+  GK+IH Q+I  G+  D      +++MY KCG +  A ++F  +  RD+VS+NT++
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
             +AQ  + +  L L  +M  EG   D +T +++L A      L  GK +H   +  G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S + V TALV M  +CG V++A+  F G+  R+VV +N++IAA  + G+  EA   + +M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              GV     T +  L+AC+    LE G  +H  + +    +DV + N+LISMY++C  +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
            +A ++F  +  + L+SWNA+I GYA+     EA+  + +M+S+ +KP   T + ++ A 
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A  S     K IH  ++RS  + N  +  AL++MY +CG++  A+ +F+    R V +WN
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI G+  HG  + A +LF +M     +P++ITF   +S C +   +E G      + + 
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVE 627
            G++  ++   A++++  R G L +A +    +     +  + AM+G C       K +E
Sbjct: 562 -GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGEDMKAIE 619

Query: 628 LGEKAANRLFELDPDEGGYHVLLA 651
           L  +  N  F   PD   +  +L+
Sbjct: 620 LFWQMQNEGFR-PPDGSTFTSILS 642


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 289/772 (37%), Positives = 449/772 (58%), Gaps = 5/772 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C+S K +   RR+   +   G    +L    L+ ++ +  S+ +A +VFE +  K 
Sbjct: 10  LLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 69

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+  Y +    D A+    +M+ +DV P    Y  +L  C     ++ G EIHG
Sbjct: 70  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 129

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           Q++  GF  D+F  T ++NMY KCG +  A+  F R+  RD+VSW  ++A   Q+    L
Sbjct: 130 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 189

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L  RM  +G   + IT+ ++  A  +   L  GK V+G       +S V V  + V+
Sbjct: 190 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVN 249

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+   G +  AR +F+ M  R+VV+WN +I  YV+  N  EA+R+F ++   GV+  ++T
Sbjct: 250 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDIT 309

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L+    L  L +G  +H+L+ +     D  +  +L+S+Y +C+   +A  IF  + 
Sbjct: 310 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMG 369

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +++W  M + YAQNG   EAL  F +M+ +  +P S T+V+V+   A L+ ++  + 
Sbjct: 370 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 429

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH+ +I + F   + V TALI+MY KCG +  A ++F+ M +R +  WN M+  Y  HG 
Sbjct: 430 IHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGY 489

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
               ++LFN+M     K + ++F+  +SA SHSG V +G  YF ++ +D+ I P  + YG
Sbjct: 490 YDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 549

Query: 583 AMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
            +VDLLGRAGR+ EA D + K+    P   ++  +LGAC+ H   +  + AA ++ E DP
Sbjct: 550 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 609

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              G +V+L+N+YAAA  WD + ++R +M  +G++K PG S +E+ N VH F  G   HP
Sbjct: 610 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 669

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +   IY  L+ L  E++AAGY+PDT  I HDVED  +E++L  HSE+LAIAFGL+++ PG
Sbjct: 670 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPG 729

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + + KNLRVC DCH ATKYIS + GREI+VRD HRFH FK+G CSC DYW
Sbjct: 730 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 258/490 (52%), Gaps = 6/490 (1%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  LL+ C     +  G+ +H  +   GF  +      ++ MYA+CG + EA ++
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +  +D+ +W  ++  + Q G  + AL +  +M EE      +T V+IL A A+  SL
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           + G  +HG  ++ GF+  V V TAL++MY KCG V  A   F  ++ R+VVSW +MIAA 
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+      A  ++++M   GV P  +T+    +A  D   L  G FV+ L+    + +DV
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NS ++M+     +  A  +F  +  + +V+WN +I  Y QN    EA+  F +++  
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            +K +  T V ++     L+ +   K IH LV  + ++++  V TAL+ +Y +C A G A
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSH 554
             +F  M  + V TW VM   Y  +G  K A++LF +M LEG  +P   T +  +  C+H
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG-RRPTSATLVAVLDTCAH 420

Query: 555 SGLVEEGIHYFTSLKKD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
              +++G    + + ++ + +E V++   A++++ G+ G++ EA    +KM  +  I V+
Sbjct: 421 LAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVW 477

Query: 614 GAMLGACKIH 623
            +MLGA   H
Sbjct: 478 NSMLGAYAQH 487



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 3/203 (1%)

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KPD+   V+++   +    + + + +H  V    FE+N  V   LI MYA+CG+V  A+ 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+++  + V  W  MI  Y   G    A+ +F +M E    P  +T++  ++AC+ +  
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           +++G+     + +  G E  +    A++++  + G +  AWD  +++     +  + AM+
Sbjct: 121 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMI 178

Query: 618 GACKIHKNVELGEKAANRLFELD 640
            AC  H    L      R+ +LD
Sbjct: 179 AACVQHDQFALARWLYRRM-QLD 200


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 312/834 (37%), Positives = 483/834 (57%), Gaps = 51/834 (6%)

Query: 13  TNSTPTQTLHEHKHTLSQ--RAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSG 67
           + +  + T H+   T +    A +P   +  P+  +L+    +++L   +++   + K G
Sbjct: 58  SQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPA--VLKATAGIQDLNLGKQLHAHVFKFG 115

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
                     LV+++ K   +  A RVF+ I ++ D  +++M+    +F   + AV    
Sbjct: 116 QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFR 175

Query: 128 RMRYDDVAPVVYNYTYLLKVCGD-VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
            M  ++V P  +    +   C + +  +  GK++H  ++ NG     F    +V MYAK 
Sbjct: 176 LMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKL 234

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G++ EA  +FD   ++DLVSWNTI++  +QN   E AL  +  M + G R + +T+ S+L
Sbjct: 235 GRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVL 294

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRN 304
           PA +++  L  GK +H + +    D I N  V  ALVDMY  C + E  RLVFDGM  R 
Sbjct: 295 PACSHLEMLGCGKEIHAFVLMNN-DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRT 353

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +  WN+MIA YV      EA+ +F +M+ + G+ P +VT+   L AC           +H
Sbjct: 354 IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIH 413

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
             + +     D  + N+L+ MYS+  +++ A  IF  +  K +VSWN MI GY   GR +
Sbjct: 414 SCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHD 473

Query: 424 EALNYFCKMR----------------SKN--IKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +ALN    M+                +KN  +KP+S T+++V+P  A L+ +   K IHA
Sbjct: 474 DALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHA 533

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             ++    K+V V +AL+DMYAKCG +  +R +F+ M+ R+V TWNV+I  YG HG G+ 
Sbjct: 534 YAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEE 593

Query: 526 AVELFNKMLEG-----PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           A++LF +M+E        +PN++T++   ++ SHSG+V+EG++ F ++K  +GIEP  DH
Sbjct: 594 ALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDH 653

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           Y  +VDLLGR+G++ EA++ I+ MP     +  + ++LGACKIH+N+E+GE AA  LF L
Sbjct: 654 YACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVL 713

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP+   Y               K + +   M++KG++K PGCS +E  +EVH F +G   
Sbjct: 714 DPNVLDYGT-------------KQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVS 760

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQSK ++ +LETL   +K  GYVPDT+ + H+V +  +E +L  HSE+LAIAFGLLN+S
Sbjct: 761 HPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTS 820

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           PG+TI + KNLRVC DCH ATK+IS +  REII+RD+ RFH F+NG CSCGDYW
Sbjct: 821 PGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 310/863 (35%), Positives = 480/863 (55%), Gaps = 79/863 (9%)

Query: 3   SHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL 62
           SH   ++S+F+ S P  T              P  I++         C ++ +++ I   
Sbjct: 14  SHQYIKVSLFSTSAPEIT--------------PPFIHK---------CKTISQVKLIHQK 50

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYH--TMLKGYAKFASLD 120
           ++  G+   +L  + L+S +     LS A  +    P     +YH  ++++ Y      +
Sbjct: 51  LLSFGILTLNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN 109

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
             +     M      P  Y + ++ K CG++  +R G+  H   +V GF  ++F    +V
Sbjct: 110 KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALV 169

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE-GRRGDF 239
            MY++C  + +A K+FD M   D+VSWN+I+  +A+ G  ++AL++ +RM  E G R D 
Sbjct: 170 AMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN 229

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           IT+V++LP  A++G+  +GK +H +A+ +     + V   LVDMYAKCG ++ A  VF  
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM---------------------------- 331
           M  ++VVSWN+M+A Y + G  E+A+R+F+KM                            
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349

Query: 332 -------LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL-------GTDVSM 377
                  L  G++P  VT++  L  CA +G L  G  +H    +  +       G +  +
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKT--LVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            N LI MY+KCKKVD A  +F  L  K   +V+W  MI GY+Q+G  N+AL    +M  +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469

Query: 436 N--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN---VFVMTALIDMYAKCG 490
           +   +P++FT+   + A A L+ +R  K IHA  +R+  ++N   +FV   LIDMYAKCG
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCG 527

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           ++  AR +FD M  ++  TW  ++ GYG HG G+ A+ +F++M     K + +T L  + 
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSHSG++++G+ YF  +K  +G+ P  +HY  +VDLLGRAGRLN A   I++MP+EP  
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V+ A L  C+IH  VELGE AA ++ EL  +  G + LL+N+YA A  W  + ++R++M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SI 729
             KG++K PGCS VE      +F+ G   HP +K IY  L   +  IK  GYVP+T  ++
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFAL 767

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           HDV+D  +++LL  HSEKLA+A+G+L +  G+ I I KNLRVCGDCH A  Y+S +   +
Sbjct: 768 HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHD 827

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II+RD  RFH FKNG CSC  YW
Sbjct: 828 IILRDSSRFHHFKNGSCSCKGYW 850


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/771 (38%), Positives = 465/771 (60%), Gaps = 11/771 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L   CT+L+  + +   ++ S          KLV+L+C   +++ A   F+ I ++    
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 106 YHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ M+ GY +  +  + +  F + M    + P    +  +LK C  V +   G +IH   
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF  D++    ++++Y++   +  A  +FD MP RD+ SWN +++G+ Q+G A+ AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            L   +    R  D +T+VS+L A    G    G  +H Y+++ G +S + VS  L+D+Y
Sbjct: 237 TLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A+ GR+   + VFD M  R+++SWNS+I AY     P  A+ +FQ+M    ++P  +T++
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352

Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
                 + LGD+     V    L +     D+++ N+++ MY+K   VD A  +F+ L  
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKW 462
             ++SWN +I GYAQNG  +EA+  +  M  +  I  +  T VSV+PA ++   +R    
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  ++++    +VFV+T+L DMY KCG +  A +LF  +   +   WN +I  +G HG 
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ AV LF +ML+   KP+ ITF+  +SACSHSGLV+EG   F  ++ DYGI P + HYG
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVD+ GRAG+L  A  FI+ M ++P  +++GA+L AC++H NV+LG+ A+  LFE++P+
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             GYHVLL+N+YA+A  W+ + ++R+I   KGL+KTPG S +E+ N+V  FY+G+  HP 
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM 712

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            + +Y  L  L  ++K  GYVPD   +  DVED  +E++L SHSE+LAIAF L+ +   +
Sbjct: 713 YEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKT 772

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TI I KNLRVCGDCH+ TK+IS +T REIIVRD +RFH FKNGVCSCGDYW
Sbjct: 773 TIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 291/774 (37%), Positives = 454/774 (58%), Gaps = 6/774 (0%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           S+LL +   +L  ++ I   IIK+ +  +     KL+ ++     L  A  VF+      
Sbjct: 50  SSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPE 109

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            A+ + M+ G+ +     +       M   D+    Y   + LK C D+ +   G EI  
Sbjct: 110 TAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIR 169

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF L L+  + +VN   K G + +A K+FD MPE+D+V WN+I+ G+ Q G    
Sbjct: 170 AAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWE 229

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           ++ +   M   G R   +T+ ++L A    G  ++G   H Y +  G  + V V T+LVD
Sbjct: 230 SIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVD 289

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+  G   +A LVFD M SR+++SWN+MI+ YV+ G   E+  +F++++  G    + T
Sbjct: 290 MYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGT 349

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  +  C+   DLE G  +H  + + +L + + ++ +++ MYSKC  + +A  +F ++ 
Sbjct: 350 LVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG 409

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +++W AM++G +QNG   +AL  FC+M+ + +  +S T+VS++   A L  +   + 
Sbjct: 410 KKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRT 469

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH---VTTWNVMIDGYGT 519
           +HA  IR  +  +  + +ALIDMYAKCG + +A  LF+  NE H   V   N MI GYG 
Sbjct: 470 VHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFN--NEFHLKDVILCNSMIMGYGM 527

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG G+ A+ ++++M+E   KPN  TF+  ++ACSHSGLVEEG   F S+++D+ + P   
Sbjct: 528 HGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK 587

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  +VDL  RAGRL EA + +++MP +P   V  A+L  C+ HKN  +G + A+RL  L
Sbjct: 588 HYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISL 647

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           D    G +V+L+NIYA A  W+ +  +R +M  +G++K PG SL+E+ N+V++F++    
Sbjct: 648 DYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDS 707

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HP    IY  LE L  E++A GY+PDT+ +  DV + ++  LL  HSE+LAIAFGLL++ 
Sbjct: 708 HPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTP 767

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GS I I KNLRVC DCHN TKYIS +  REIIVRD +RFH F NG CSC D+W
Sbjct: 768 CGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 282/760 (37%), Positives = 443/760 (58%), Gaps = 76/760 (10%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           Y+  +  + +  +L++A+  +   +  ++      Y+ +L++C     +  GK++H  + 
Sbjct: 69  YNAKILHFCQLGNLENAMELVCMCQKSELE--TKTYSSVLQLCAGSKSLTDGKKVHSIIK 126

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEE---------------------------------- 191
            N  ++D      +V++YA CG ++E                                  
Sbjct: 127 SNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 192 -----------------AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
                            A ++FD++ +RD++SWN++++G+  NG  E  L++  +M   G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG 246

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              D  TI+S+L   AN G+L +GKAVH  A+++ F+  +N S  L+DMY+KCG ++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VF+ M  RNVVSW SMIA Y   G  + A+R+ Q+M  +GV+   V     LHACA  G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG 366

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            L+ G  VH  +    + +++ + N+L+ MY+KC  +D A  +FS +  K ++SWN MI 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI- 425

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
                                 +KPDS TM  ++PA A LS +   K IH  ++R+ +  
Sbjct: 426 --------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 465

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           +  V  AL+D+Y KCG +G AR LFDM+  + + +W VMI GYG HG G  A+  FN+M 
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMR 525

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +   +P++++F+  + ACSHSGL+E+G  +F  +K D+ IEP ++HY  MVDLL R G L
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           ++A++FI+ +PI P  T++GA+L  C+I+ ++EL EK A R+FEL+P+  GY+VLLANIY
Sbjct: 586 SKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIY 645

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG-STKHPQSKRIYTFLETL 713
           A A  W+++ ++R  + KKGL+K PGCS +E+K +V+ F SG ++ HP SK+I + L+ +
Sbjct: 646 AEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKM 705

Query: 714 IDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
             ++K  GY P T  ++ + ++  +E  L  HSEKLA+AFGLL   P  T+ + KNLRVC
Sbjct: 706 RRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVC 765

Query: 773 GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GDCH   K++S  T REI++RD +RFH FKNG CSC  +W
Sbjct: 766 GDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 217/429 (50%), Gaps = 25/429 (5%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A+ +F+ + D+    +++M+ GY      +  +    +M Y  +   +     +L  C +
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
            G +  GK +H   I + F   +     +++MY+KCG ++ A ++F++M ER++VSW ++
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +AG+ ++G ++ A+ L+ +M +EG + D +   SIL A A  GSL  GK VH Y      
Sbjct: 324 IAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           +S + V  AL+DMY KCG ++ A  VF  M  ++++SWN+MI                  
Sbjct: 384 ESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE---------------- 427

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
                ++P + T+   L ACA L  LERG  +H  + +    +D  + N+L+ +Y KC  
Sbjct: 428 -----LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A  +F  +  K LVSW  MI GY  +G  NEA+  F +MR   I+PD  + +S++ A
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542

Query: 451 LAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHV 507
            +   ++    W    ++++ F  E  +     ++D+ ++ G +  A    + +      
Sbjct: 543 CSHSGLLEQG-WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601

Query: 508 TTWNVMIDG 516
           T W  ++ G
Sbjct: 602 TIWGALLCG 610



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 177/356 (49%), Gaps = 23/356 (6%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L IKS    +  F   L+ ++ K   L  A RVFE + ++    + +M+ GY +    D 
Sbjct: 276 LAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+  L +M  + V   V   T +L  C   G +  GK++H  +  N    +LF    +++
Sbjct: 336 AIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY KCG ++ A  +F  M  +D++SWNT++                        + D  T
Sbjct: 396 MYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRT 434

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +  ILPA A++ +L  GK +HGY +R G+ S  +V+ ALVD+Y KCG +  ARL+FD + 
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI- 360
           S+++VSW  MI+ Y   G   EA+  F +M D G+EP  V+ +  L+AC+  G LE+G  
Sbjct: 495 SKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG 415
           F + + +   +   +     ++ + S+   + +A +    L        W A++ G
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 55/370 (14%)

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R V  +N+ I  + + GN E AM +    + Q  E    T    L  CA    L  G  V
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMELV--CMCQKSELETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H ++    +  D  +   L+S+Y+ C  +     +F  ++ K +  WN M+  YA+ G  
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181

Query: 423 NEALNYFCKMRSKNI---KPDS-------------------------------------- 441
            E++  F  M  K I   +P+S                                      
Sbjct: 182 KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQ 241

Query: 442 ----------FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
                      T++SV+   A    +   K +H+L I+S FE+ +     L+DMY+KCG 
Sbjct: 242 MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGD 301

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           +  A  +F+ M ER+V +W  MI GY   G    A+ L  +M +   K + +     + A
Sbjct: 302 LDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHA 361

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           C+ SG ++ G      +K +  +E  +    A++D+  + G ++ A      M ++  I 
Sbjct: 362 CARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD-II 419

Query: 612 VFGAMLGACK 621
            +  M+G  K
Sbjct: 420 SWNTMIGELK 429



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 7/195 (3%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C SL  L R   I   I+++G          LV L+ K   L  A  +F+ IP 
Sbjct: 436 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  M+ GY      ++A++    MR   + P   ++  +L  C   G + +G   
Sbjct: 496 KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 161 HGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
              ++ N F+++  L     +V++ ++ G + +AY+  + +P   D   W  ++ G    
Sbjct: 556 F-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIY 614

Query: 218 GFAELALDLVTRMHE 232
              ELA  +  R+ E
Sbjct: 615 HDIELAEKVAERVFE 629


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/684 (43%), Positives = 424/684 (61%), Gaps = 18/684 (2%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           VAP  Y + + LK C  + +   G+ IH   I  G   DLF  T +++MY KC  + +A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALD--LVTRMHEEGRRGDFITIVSILPAVAN 251
            +F  MP RDLV+WN ++AG+A +G    A+   L  +M     R +  T+V++LP +A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVN----------VSTALVDMYAKCGRVETARLVFDGMK 301
            G+L  G +VH Y +RA      N          + TAL+DMYAKCG +  AR VFD M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV---EPTNVTIMEALHACADLGDLER 358
           +RN V+W+++I  +V      +A  +F+ ML QG+    PT  +I  AL ACA L  L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRM 243

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H LL +  +  D++  NSL+SMY+K   +D+A  +F ++  K  VS++A++ GY Q
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           NGR  EA   F KM++ N++PD+ TMVS+IPA + L+ +++ +  H  VI         +
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             ALIDMYAKCG +  +R +F+MM  R + +WN MI GYG HGLGK A  LF +M     
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+ +TF+C +SACSHSGLV EG H+F  +   YG+ P M+HY  MVDLL R G L+EA+
Sbjct: 424 PPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAY 483

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           +FIQ MP+   + V+ A+LGAC+++KN++LG+K +  + EL P+  G  VLL+NIY+AA 
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            +D+ A+VR I + +G +K+PGCS +E+   +H+F  G   HPQS  IY  L+ ++  IK
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK 603

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GY PDT+ +  D+E+  +E  L  HSEKLAIA+G+L+ S   TI + KNLRVCGDCH 
Sbjct: 604 KLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHT 663

Query: 778 ATKYISLVTGREIIVRDMHRFHCF 801
             K+ISLV  R IIVRD +RFH F
Sbjct: 664 VIKHISLVKRRAIIVRDANRFHHF 687



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 250/534 (46%), Gaps = 29/534 (5%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           Y  P AL  + C++L +    R I    I +GL       T L+ ++ K   L DAA +F
Sbjct: 11  YTFPFAL--KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLI--RMRYDDVAPVVYNYTYLLKVCGDVGE 153
             +P +    ++ ML GYA       AV+ L+  +M+   + P       LL +    G 
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 154 IRRGKEIHGQLI----------VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           + +G  +H   I           +  +  +   T +++MYAKCG +  A ++FD MP R+
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI---TIVSILPAVANVGSLRIGKA 260
            V+W+ ++ GF        A  L   M  +G    F+   +I S L A A++  LR+G+ 
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQ 246

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    ++G  + +    +L+ MYAK G ++ A  +FD M  ++ VS++++++ YV+ G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA  +F+KM    VEP   T++  + AC+ L  L+ G   H  +    L ++ S+ N+
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY+KC ++D +  +F+ +  + +VSWN MI GY  +G   EA   F +M +    PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 441 SFTMVSVIPALAELS-VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T + ++ A +    VI    W H +         +     ++D+ ++ G +  A    
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 500 DMMNER-HVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             M  R  V  W  ++     Y    LGK    +  ++  GP    +   L  I
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQEL--GPEGTGNFVLLSNI 538



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 46/337 (13%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML   V P N T   AL AC+ L D   G  +H+      L  D+ ++ +L+ MY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK--NIKPDSFTMVSVI 448
           +  AA IF+ +  + LV+WNAM+ GYA +G  + A+ +   M+ +   ++P++ T+V+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKN----------VFVMTALIDMYAKCGAVGTARAL 498
           P LA+   +     +HA  IR+C   N          V + TAL+DMYAKCG++  AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACS---- 553
           FD M  R+  TW+ +I G+        A  LF  ML +G    +  +   A+ AC+    
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 554 -------HSGLVEEGIH----YFTSLKKDYGIEPVMDH---------------YGAMVDL 587
                  H+ L + G+H       SL   Y    ++D                Y A+V  
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 588 LGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACK 621
             + GR  EA+   +KM    +EP      +++ AC 
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 337



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 153/315 (48%), Gaps = 14/315 (4%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C SL  LR   ++  L+ KSG+         L+S++ K   +  A  +F+ +  K  
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             Y  ++ GY +    ++A     +M+  +V P       L+  C  +  ++ G+  HG 
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I+ G + +      +++MYAKCG+I+ + ++F+ MP RD+VSWNT++AG+  +G  + A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVST 278
             L   M+  G   D +T + +L A ++ G +  GK       HGY +    +  +    
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI---- 467

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +VD+ ++ G ++ A      M  R +V  W +++ A     N +   ++ + + + G E
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527

Query: 338 PT-NVTIMEALHACA 351
            T N  ++  +++ A
Sbjct: 528 GTGNFVLLSNIYSAA 542


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/772 (37%), Positives = 450/772 (58%), Gaps = 5/772 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C+S K +   RR+   +   G    +L    L+ ++ +  S+ +A +VFE +  K 
Sbjct: 11  LLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 70

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+  Y +    D A+    +M+ +DV P    Y  +L  C     ++ G EIHG
Sbjct: 71  VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 130

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           Q++  GF  D+F  T ++NMY KCG +  A+  F R+  RD+VSW  ++A   Q+    L
Sbjct: 131 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 190

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L  RM  +G   + IT+ ++  A  +   L  GK ++        +S V V  + ++
Sbjct: 191 ARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMN 250

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+   G +  AR +F+ M  R+VV+WN +I  YV+  N  EA+R+F ++   G++  ++T
Sbjct: 251 MFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDIT 310

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L+    L  L +G  +H+L+ +     DV +  +L+S+Y +C+   +A  IF  + 
Sbjct: 311 FVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMG 370

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +++W  M + YAQNG   EAL  F +M+ +  +P S T+V+V+   A L+ ++  + 
Sbjct: 371 SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQ 430

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH+ +I + F   + V TALI+MY KCG +  AR++F+ M +R +  WN M+  Y  HG 
Sbjct: 431 IHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGY 490

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
               ++LFN+M     K + ++F+  +SA SHSG V +G  YF ++ +D+ I P  + YG
Sbjct: 491 YDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 550

Query: 583 AMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
            +VDLLGRAGR+ EA D + K+    P   ++  +LGAC+ H   +  + AA ++ E DP
Sbjct: 551 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 610

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              G +V+L+N+YAAA  WD + ++R +M  +G++K PG S +E+ N VH F  G   HP
Sbjct: 611 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 670

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +   IY  L+ L  E++AAGY+PDT  I HDVED  +E++L  HSE+LAIAFGL+++ PG
Sbjct: 671 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPG 730

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + + KNLRVC DCH ATKYIS + GREI+VRD HRFH FK+G CSC DYW
Sbjct: 731 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 258/490 (52%), Gaps = 6/490 (1%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  LL+ C     +  G+ +H  +   GF  +      ++ MYA+CG + EA ++
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +  +D+ +W  ++  + Q G  + AL +  +M EE      +T V+IL A A+  SL
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           + G  +HG  ++ GF+  V V TAL++MY KCG V  A   F  ++ R+VVSW +MIAA 
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+      A  ++++M   GV P  +T+    +A  D   L  G F++ L+    + +DV
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDV 242

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NS ++M+     +  A  +F  +  + +V+WN +I  Y QN    EA+  F +++  
Sbjct: 243 RVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD 302

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            IK +  T V ++     L+ +   K IH LV  + ++++V V TAL+ +Y +C A G A
Sbjct: 303 GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQA 362

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSH 554
             +F  M  + V TW VM   Y  +G  K A++LF +M LEG  +P   T +  +  C+H
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG-RRPTSATLVAVLDTCAH 421

Query: 555 SGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
              +++G    +  ++  + +E V++   A++++ G+ G++ EA    +KM  +  I V+
Sbjct: 422 LAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVW 478

Query: 614 GAMLGACKIH 623
            +MLGA   H
Sbjct: 479 NSMLGAYAQH 488



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            KPD+   V+++   +    + + + +H  V    FE+N  V   LI MYA+CG+V  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +F+++  + V  W  MI  Y   G    A+ +F +M E    P  +T++  ++AC+ + 
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            +++G+     + +  G E  +    A++++  + G +  AWD  +++     +  + AM
Sbjct: 121 SLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 178

Query: 617 LGACKIHKNVELGEKAANRLFELD 640
           + AC  H    L      R+ +LD
Sbjct: 179 IAACVQHDQFALARWLYRRM-QLD 201


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/775 (37%), Positives = 455/775 (58%), Gaps = 9/775 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQ---HLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           +L++C+ ++ L   +R   L+  S L      ++   KLV ++ K   L +A RVF+ +P
Sbjct: 97  VLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP 156

Query: 100 DKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
              D  ++  ++ GYAK   L + V    +M    V P  Y  + +LK    +G I  G+
Sbjct: 157 QVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGE 216

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +HG L   GF         ++  YAK  + ++A  +FD MP RD++SWN++++G   NG
Sbjct: 217 VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNG 276

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A++L  RM  EG   D  T++S+LPA A +  L +G+ VHGY+++ GF S  +++ 
Sbjct: 277 LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            L+DMY+ C    +   +F  M  +NVVSW +MI +Y   G  ++   +FQ+M  +G  P
Sbjct: 337 VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
               I  ALHA A    L+ G  VH    +  +   +++TN+L+ MY KC  ++ A  IF
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             +  K ++SWN +I GY++N   NEA + F +M  + ++P++ TM  ++PA A LS + 
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLE 515

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + +HA  +R  + ++ FV  ALIDMY KCGA+  AR LFD ++ +++ +W +M+ GYG
Sbjct: 516 RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A+ LF +M      P+  +F   + ACSHSGL +EG  +F +++K++ IEP +
Sbjct: 576 MHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRL 635

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  MVDLL   G L EA++FI  MPIEP  +++ ++L  C+IH+NV+L E+ A R+FE
Sbjct: 636 KHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFE 695

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           L+P+  GY+VLLANIYA A  W+ + K++  +  +GL++  GCS +E K +VH F + + 
Sbjct: 696 LEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNR 755

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQ  RI  FL  +   ++  G+ P    ++   ++ V    L  HS KLA+AFG+LN 
Sbjct: 756 NHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNL 815

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S G  I + KN RVC  CH A K+IS +  REII+RD +RFH F+ G CSC  YW
Sbjct: 816 SEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 172/545 (31%), Positives = 265/545 (48%), Gaps = 47/545 (8%)

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +   L++A+  L     DD      +Y  +L++C +V  +  GK  H   +V   SL   
Sbjct: 73  RSGDLEEALGLLGSDGVDD-----RSYGAVLQLCSEVRSLEGGKRAH--FLVRASSLGRD 125

Query: 175 AMTGVVN-----MYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVT 228
            M  V+      MY KCG +E A ++FD MP+  D+  W  +++G+A+ G     + L  
Sbjct: 126 GMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFR 185

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           +MH  G R D  TI  +L  +A +GS+  G+ VHG   + GF S   V  AL+  YAK  
Sbjct: 186 KMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           R + A LVFDGM  R+V+SWNSMI+     G  ++A+ +F +M  +G E  + T++  L 
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACA+L  L  G  VH    +    +  S+ N L+ MYS C        IF  +  K +VS
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS 365

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI  Y + G  ++    F +M  +  +PD F + S + A A   ++++ K +H   I
Sbjct: 366 WTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAI 425

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           R+  EK + V  AL++MY KCG +  A+ +FD +  + + +WN +I GY  + L   A  
Sbjct: 426 RNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFS 485

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT----SLKKDYGIEPVMDHY- 581
           LF +ML    +PN +T  C + A +    +E G  +H +      L+ D+    ++D Y 
Sbjct: 486 LFTEMLL-QLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYV 544

Query: 582 --GA---------------------MVDLLGRAGRLNEAWDFIQKM---PIEPGITVFGA 615
             GA                     MV   G  GR  +A    ++M    I P    F A
Sbjct: 545 KCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSA 604

Query: 616 MLGAC 620
           +L AC
Sbjct: 605 ILYAC 609


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/659 (42%), Positives = 420/659 (63%), Gaps = 2/659 (0%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R   +IH +L+++G   + F MT +VN  +  GQI  A K+FD     D+  WN I+  +
Sbjct: 70  RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           ++N      +++   M   G   D  T   +L A   +    +   +HG  ++ GF S V
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V   LV +YAKCG +  A++VFDG+  R +VSW S+I+ Y + G   EA+R+F +M + 
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           GV+P  + ++  L A  D+ DLE+G  +H  + ++ L  + ++  SL + Y+KC  V  A
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
              F +++   ++ WNAMI GYA+NG   EA+N F  M S+NIKPDS T+ S + A A++
Sbjct: 310 KSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQV 369

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +  A+W+   V +S +  ++FV T+LIDMYAKCG+V  AR +FD  +++ V  W+ MI
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMI 429

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            GYG HG G  A+ L++ M +    PND+TF+  ++AC+HSGLV+EG   F  + KD+ I
Sbjct: 430 MGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEI 488

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
            P  +HY  +VDLLGRAG L EA  FI K+PIEPG++V+GA+L ACKI++ V LGE AAN
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           +LF LDP   G++V L+N+YA++ +WD +A VR +M +KGL K  G S++E+  ++ +F+
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFH 608

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
            G   HP +K I+  L+ L   +K  G+VP T S+ HD+    +E  LS HSE++A+A+G
Sbjct: 609 VGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYG 668

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L++++PG+T+ I KNLR C +CH+A K IS +  REIIVRD +RFH FK+G+CSCGDYW
Sbjct: 669 LISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 278/528 (52%), Gaps = 20/528 (3%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQ 71
           F+++   +    H H  +  ++  S         L++  T  + L +I   ++ SGL   
Sbjct: 37  FSSALHPEHFVNHDHCFNSDSFYAS---------LIDNSTHKRHLDQIHNRLVISGLQHN 87

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
               TKLV+       +  A ++F+    PD    +++ +++ Y++     D V     M
Sbjct: 88  GFLMTKLVNGSSNLGQICYARKLFDEFCYPDVF--MWNAIIRSYSRNNMYRDTVEMYRWM 145

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R+  V P  + + Y+LK C ++ +      IHGQ+I  GF  D+F   G+V +YAKCG I
Sbjct: 146 RWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHI 205

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
             A  +FD +  R +VSW +I++G+AQNG A  AL + ++M   G + D+I +VSIL A 
Sbjct: 206 GVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAY 265

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
            +V  L  G+++HG+ ++ G +    +  +L   YAKCG V  A+  FD MK+ NV+ WN
Sbjct: 266 TDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWN 325

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +MI+ Y + G+ EEA+ +F  M+ + ++P +VT+  A+ A A +G LE   ++   + + 
Sbjct: 326 AMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKS 385

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
             G+D+ +  SLI MY+KC  V+ A  +F +   K +V W+AMI+GY  +G+  EA+N +
Sbjct: 386 NYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLY 445

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAK 488
             M+   + P+  T + ++ A     +++   +  H +       +N    + ++D+  +
Sbjct: 446 HVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEH-YSCVVDLLGR 504

Query: 489 CGAVGTARA-LFDMMNERHVTTWNVMIDG---YGTHGLGK-AAVELFN 531
            G +G A A +  +  E  V+ W  ++     Y    LG+ AA +LF+
Sbjct: 505 AGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFS 552


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/773 (36%), Positives = 458/773 (59%), Gaps = 9/773 (1%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C+   +L    ++   +IK G     + +T L+ ++ + + L DA + F+ +P + 
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRD 165

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +++  + +     + +    +M  + V P       + + C ++G +R G+ +HG
Sbjct: 166 VVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHG 225

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++      +      ++ MY K G +  A ++F+ +P R    W  +++ + Q+G  + 
Sbjct: 226 YVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN-VSTALV 281
           AL++  +M E     + +T+V +L A A +G ++ G++VHG+ +R   D  ++ +  AL+
Sbjct: 286 ALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALM 345

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++YA  G +     VF+ +K + ++SWN++I+ +   G PEEA+ +F +M  QG+ P + 
Sbjct: 346 ELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSY 405

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           ++  +L AC  +   + G  +H  + +     D  + N+LI MY+KC  V  A  +F K+
Sbjct: 406 SLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKI 464

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + K+LV+WN+MI G++QNG   EA+  F +M    +K D  T +SVI A + L  +   K
Sbjct: 465 KEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGK 524

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           W+H  +I     K+ ++ TAL DMY+KCG +  A  +FD M+ER + +W+VMI GYG HG
Sbjct: 525 WVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHG 584

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
              A + LFN+ML    KPNDITF+  +SACSH+G VEEG  YF S+  ++G+EP  DH+
Sbjct: 585 QINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHF 643

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLL RAG LN A+  I  +P     +++GA+L  C+IHK +++ +     L ++D 
Sbjct: 644 ACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDT 703

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
            + GY+ LL+NIYA    WDK  KVR++M+ KGL+K PG S +E+  +++ F  G T H 
Sbjct: 704 ADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHS 763

Query: 702 QSKRIYTFLETLIDEIKAAGY--VPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
           Q+K IY FLE     + A  Y   PD NSI     + +EN + SHSEKLAIAFG++N+ P
Sbjct: 764 QTKDIYRFLENFRSLVHAQVYDSEPD-NSIVGTSKFNKENNVVSHSEKLAIAFGIINTRP 822

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+T+ I KNLRVC DCH+  K  S +TGREII+RD++RFHCF+NG CSC DYW
Sbjct: 823 GTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 239/470 (50%), Gaps = 9/470 (1%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  L + G      A T ++  YA+ G  E + ++FD  P+ D   W  ++  +   G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 219 FAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           F E A+ L   M   ++ +  +F+   S+L A +  G L +G  VHG  ++ GF+S   V
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFV-FPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            T+L+ MY +   ++ A   FD M  R+VV+W+S++  +V+ G   E + +F +M+ + V
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           EP +VT++    AC++LG L  G  VH  + + ++ ++ S+ NSLI MY K   +  A  
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +  +    W  MI  Y Q+G   EALN F KM+   ++P+  TMV V+ A A L  
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGR 317

Query: 457 IRYAKWIHALVIRSCFEKNV-FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           ++  + +H  VIR   +  + F+  AL+++YA  G +     +F+ + E+ + +WN +I 
Sbjct: 318 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 377

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            +  +G  + A+ LF +M      P+  +   ++SAC      + G      + K     
Sbjct: 378 IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFN 437

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             + +  A++D+  + G ++ A    +K+  E  +  + +M+  C   +N
Sbjct: 438 DFVQN--ALIDMYAKCGFVHSANKMFEKIK-EKSLVTWNSMI--CGFSQN 482



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 2/164 (1%)

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           M+  +P     +       +HA +  +   ++    T LI+ YA+ G   +++ +FD   
Sbjct: 1   MILYMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGI 562
           +     W V+I  Y   G  + AV L+++M+ +  T+ ++  F   + ACS  G +  G 
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
                + K  G E       +++ + G    L++A      MPI
Sbjct: 121 KVHGRVIK-CGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPI 163


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/785 (35%), Positives = 468/785 (59%), Gaps = 2/785 (0%)

Query: 30   QRAYIPSRIYRHPSAL-LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSL 88
            +R  + +  + + +AL    +C  L+  +++    IK G        + LV L+ K   +
Sbjct: 221  RREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEM 280

Query: 89   SDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
              A RVF  +P +    ++ +L G+A+    +  ++   RM   ++    +  + +LK C
Sbjct: 281  VLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGC 340

Query: 149  GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             + G +R G+ +H   I  G  LD F    +V+MY+KCG   +A K+F R+ + D+VSW+
Sbjct: 341  ANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWS 400

Query: 209  TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
             I+    Q G +  A ++  RM   G   +  T+ S++ A  ++G L  G+++H    + 
Sbjct: 401  AIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKY 460

Query: 269  GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
            GF+    V  ALV MY K G V+    VF+   +R+++SWN++++ + +    +  +RIF
Sbjct: 461  GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520

Query: 329  QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
             +ML +G  P   T +  L +C+ L D++ G  VH  + +  L  +  +  +L+ MY+K 
Sbjct: 521  NQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKN 580

Query: 389  KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            + ++ A  IF++L  + L +W  ++ GYAQ+G+  +A+  F +M+ + +KP+ FT+ S +
Sbjct: 581  RFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640

Query: 449  PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
               + ++ +   + +H++ I++    ++FV +AL+DMYAKCG V  A  +FD +  R   
Sbjct: 641  SGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700

Query: 509  TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            +WN +I GY  HG G  A++ F  ML+  T P+++TF+  +SACSH GL+EEG  +F SL
Sbjct: 701  SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 760

Query: 569  KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
             K YGI P ++HY  MVD+LGRAG+ +E   FI++M +   + ++  +LGACK+H N+E 
Sbjct: 761  SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEF 820

Query: 629  GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
            GE+AA +LFEL+P+    ++LL+N++AA  MWD +  VR +M  +G++K PGCS VE+  
Sbjct: 821  GERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNG 880

Query: 689  EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEK 747
            +VH F S    HP+ + I+  L+ L  ++ + GY P+T+ + H+V D  ++ LL  HSE+
Sbjct: 881  QVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSER 940

Query: 748  LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
            LA+AF LL++S   TI I KNLR+CGDCH+  K IS +T +E++VRD++ FH FKNG CS
Sbjct: 941  LALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCS 1000

Query: 808  CGDYW 812
            C ++W
Sbjct: 1001 CQNFW 1005



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 185/590 (31%), Positives = 305/590 (51%), Gaps = 8/590 (1%)

Query: 14  NSTPTQTLHE--HKHTLSQRAYIPSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGL 68
           NSTP   + E   K  + +     S+      + +L  C S   L E + I   +IKSG+
Sbjct: 100 NSTPGNKIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGI 159

Query: 69  -CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
             D HL+ + LV+++ K  S + A +VF  IP++    +  ++ G+        AV+   
Sbjct: 160 NPDSHLWNS-LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFC 218

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
            MR + V    + Y   LK C    ++  GK++H + I  G   DLF  + +V++YAKCG
Sbjct: 219 EMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG 278

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
           ++  A ++F  MP+++ VSWN ++ GFAQ G AE  L+L  RM          T+ ++L 
Sbjct: 279 EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLK 338

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
             AN G+LR G+ VH  A+R G +    +S  LVDMY+KCG    A  VF  ++  +VVS
Sbjct: 339 GCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS 398

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           W+++I    + G   EA  +F++M   GV P   T+   + A  DLGDL  G  +H  + 
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +     D ++ N+L++MY K   V     +F     + L+SWNA++ G+  N   +  L 
Sbjct: 459 KYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLR 518

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F +M ++   P+ +T +S++ + + LS +   K +HA ++++  + N FV TAL+DMYA
Sbjct: 519 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 578

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           K   +  A  +F+ + +R +  W V++ GY   G G+ AV+ F +M     KPN+ T   
Sbjct: 579 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 638

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           ++S CS    ++ G     S+    G    M    A+VD+  + G + +A
Sbjct: 639 SLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/738 (38%), Positives = 434/738 (58%), Gaps = 1/738 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV+ + K  SL+DA +VF+ +P +    +++M+  Y+      +A     RM+ +   
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGER 258

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                +  +L  C +   ++ GK +   +    F LDLF  T ++ MYA+C   E+A ++
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQV 318

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F RM + +L++W+ I+  FA +G    AL     M +EG   + +T +S+L        L
Sbjct: 319 FGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 378

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
                +H      G D    +  ALV++Y +C   + AR VFD ++  N++SWNSMI  Y
Sbjct: 379 EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIY 438

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+    ++A+++F+ M  QG++P  V  M  L AC           VH+ +++  LG   
Sbjct: 439 VQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSP 498

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  SL++MY+K  ++D A  I  ++  + + +WN +I GYA +GR  EAL  + K++ +
Sbjct: 499 LVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLE 558

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I  D  T +SV+ A    + +   K IH+  +    + +V V  AL +MY+KCG++  A
Sbjct: 559 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FD M  R   +WN M+  Y  HG  +  ++L  KM +   K N ITF+  +S+CSH+
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 678

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GL+ EG  YF SL  D GIE   +HYG +VDLLGRAG+L EA  +I KMP+EPGI  + +
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC++ K+++ G+ AA +L ELDP      V+L+NIY+    W   AK+R  M  + +
Sbjct: 739 LLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 798

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +K PG S +++KN+VH F    T HP++  IY  +E L   ++ AGYVPDT  + HDV++
Sbjct: 799 KKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 858

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E+LL+ HSEKLAIAFGL+++   S++HI KNLRVC DCH ATK+IS +TGREI+VRD
Sbjct: 859 EQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRD 918

Query: 795 MHRFHCFKNGVCSCGDYW 812
            HRFH F++G CSC DYW
Sbjct: 919 NHRFHHFRDGSCSCKDYW 936



 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 184/588 (31%), Positives = 306/588 (52%), Gaps = 10/588 (1%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C S +ELR    +  L ++ G     L  T L++++ K  +L DA  VFE + +K 
Sbjct: 64  VLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN 123

Query: 103 DALYHTMLKGYA-KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ ML  Y+ +      AV    RM  + V   V  +  +L    D   +R+GK IH
Sbjct: 124 VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIH 183

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +  +  SLD+F  T +VN Y KCG + +A K+FD MP R + +WN++++ ++ +  + 
Sbjct: 184 SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG 243

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A  +  RM +EG R D +T +SIL A  N  +L+ GK V        F+  + V TAL+
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALI 303

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MYA+C   E A  VF  MK  N+++W+++I A+ + G+  EA+R F+ M  +G+ P  V
Sbjct: 304 TMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRV 363

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T +  L+       LE    +H L+ +  L    +M N+L+++Y +C+  D A  +F +L
Sbjct: 364 TFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL 423

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           +   L+SWN+MI  Y Q  R ++AL  F  M+ + I+PD    ++++ A    S  R  K
Sbjct: 424 ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRK 483

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H  V  S    +  V T+L++MYAK G +  A  +   M+E+ +T WNV+I+GY  HG
Sbjct: 484 LVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHG 543

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMD 579
             + A+E + K+       + +TF+  ++AC+ S  + EG  IH   S   + G++  + 
Sbjct: 544 RSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH---SNAVECGLDSDVI 600

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
              A+ ++  + G +  A      MPI   ++ +  ML A   H   E
Sbjct: 601 VKNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE 647



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 180/634 (28%), Positives = 317/634 (50%), Gaps = 19/634 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ +  SL DA   F  I  +    ++ M+  Y+ + S  +A++    M  + VAP    
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
              +L  CG   E+R G  +H   +  GF  +    T ++NMY KCG + +A  +F+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 201 ERDLVSWNTIVAGFAQNGFA-ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           E+++V+WN ++  ++  G   +LA++L TRM  EG + + IT +++L +V +  +LR GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H     +     V V+TALV+ Y KCG +  AR VFDGM  R+V +WNSMI+AY    
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              EA  IFQ+M  +G     VT +  L AC +   L+ G  V + + +     D+ +  
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LI+MY++C+  + AA +F +++   L++W+A+I  +A +G   EAL YF  M+ + I P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T +S++      S +     IH L+     +    +  AL+++Y +C +   AR +F
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--HSGL 557
           D +   ++ +WN MI  Y        A++LF  M +   +P+ + F+  + AC+    G 
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGR 480

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
             + +H     +   G  P++    ++V++  +AG L+ A   +Q+M  E  IT +  ++
Sbjct: 481 TRKLVHQCVE-ESGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLI 536

Query: 618 GACKIHKNVELGEKAANRL-FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK--- 673
               +H       +A  +L  E  P +    V   ++  A +    LA+ + I       
Sbjct: 537 NGYALHGRSREALEAYQKLQLEAIPVD---KVTFISVLNACTSSTSLAEGKMIHSNAVEC 593

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           GL      S V +KN + + YS       ++RI+
Sbjct: 594 GLD-----SDVIVKNALTNMYSKCGSMENARRIF 622



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 217/435 (49%), Gaps = 17/435 (3%)

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY++CG +  A   F  +++RNVVSWN MI+AY    + +EA+ +F  ML +GV P  +T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L++C    +L  GI VH L  +     +  +  +L++MY KC  +  A  +F ++ 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 403 GKTLVSWNAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            K +V+WNAM+  Y+  G   + A+  F +M  + +K +  T ++V+ ++ +   +R  K
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           +IH+ V  S    +VFV TAL++ Y KCG++  AR +FD M  R V TWN MI  Y    
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
               A  +F +M +   + + +TFL  + AC +   ++ G H   S+  +   E  +   
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESI-SETSFELDLFVG 299

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
            A++ +  R     +A     +M  +  +  + A++ A   H +   GE  A R F +  
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHC--GE--ALRYFRMMQ 354

Query: 642 DEG-----GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EG        + L N +   S  ++L+++  ++ + GL  T       ++N + + Y  
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT-----TTMRNALVNVYGR 409

Query: 697 STKHPQSKRIYTFLE 711
                 ++ ++  LE
Sbjct: 410 CESPDDARTVFDQLE 424



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 27  TLSQRAYIPSRIYRHPSALLLEVCT--SLKELRRIL-PLIIKSGLCDQHLFQTKLVSLFC 83
           T+ Q+   P R+       +L  CT  S    R+++   + +SGL    L QT LV+++ 
Sbjct: 453 TMQQQGIQPDRV---NFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYA 509

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K   L  A  + + + ++    ++ ++ GYA      +A+    +++ + +      +  
Sbjct: 510 KAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFIS 569

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L  C     +  GK IH   +  G   D+     + NMY+KCG +E A ++FD MP R 
Sbjct: 570 VLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS 629

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
            VSWN ++  +AQ+G +E  L L+ +M +EG + + IT VS+L + ++ G +  G     
Sbjct: 630 AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ--- 686

Query: 264 YAMRAGFDSIVNVST----ALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
           Y    G D  + V T     LVD+  + G+++ A      M     +V+W S++ A
Sbjct: 687 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA 742


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/740 (37%), Positives = 454/740 (61%), Gaps = 5/740 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY--DDVA 135
           L++++ K   + +A +VFE +P++    +++++ G+++   L ++ +    M    +   
Sbjct: 142 LIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFV 201

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P V     +L VC    +I +G  +HG  +  G + +L     +++MY+KC  + EA  +
Sbjct: 202 PDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLL 261

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR--GDFITIVSILPAVANVG 253
           FD+  ++++VSWN+++ G+A+         L+ +M  E  +   D  TI+++LP      
Sbjct: 262 FDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERS 321

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L+  K +HGY+ R G  S   V+ A +  Y +CG + ++  VFD M ++ V SWN+++ 
Sbjct: 322 ELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLC 381

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y +  +P +A+ ++ +M D G++P   TI   L AC+ +  L  G  +H    +  L  
Sbjct: 382 GYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV 441

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  +  SL+S+Y  C K   A  +F  ++ ++LVSWN MI GY+QNG  +EA+N F +M 
Sbjct: 442 DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 501

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           S  I+P    ++ V  A ++LS +R  K +H   +++   +++FV +++IDMYAK G +G
Sbjct: 502 SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 561

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            ++ +FD + E+ V +WNV+I GYG HG GK A+ELF KML    KP+D TF   + ACS
Sbjct: 562 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 621

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLVE+G+ YF  +   + IEP ++HY  +VD+LGRAGR+++A   I++MP +P   ++
Sbjct: 622 HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 681

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            ++L +C+IH N+ LGEK AN+L EL+P++   +VL++N++A +  WD + +VR  M+  
Sbjct: 682 SSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 741

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           GLQK  GCS +E+  +VH+F  G    P+ + +      L  +I + GY PDT S+ HD+
Sbjct: 742 GLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDL 801

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  +  +L  HSEKLAI+FGLLN++ G  + + KNLR+CGDCHNA K+IS V  R+I+V
Sbjct: 802 EEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVV 861

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F++G+CSCGDYW
Sbjct: 862 RDNKRFHHFRDGICSCGDYW 881



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 241/446 (54%), Gaps = 15/446 (3%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           LL+ CG   +I  G+ +H  +  +  F  D    T ++ MY+ CG   ++  +FD++  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +L  WN IV+ + +N   E A+ + + +      + D  T+  ++ A A +  L +G+ +
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           HG A +    S V V  AL+ MY KCG VE A  VF+ M  RN+VSWNS+I  + E G  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 322 EEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +E+   F++ML  ++   P   T++  L  CA   D+E+G+ VH L  +L L  ++ + N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN--I 437
           SLI MYSKC+ +  A  +F K   K +VSWN+MI GYA+   V        KM++++  +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           K D FT+++V+P   E S ++  K +H    R   + N  V  A I  Y +CGA+ ++  
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS---- 553
           +FD+M+ + V++WN ++ GY  +   + A++L+ +M +    P+  T    + ACS    
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423

Query: 554 -HSGLVEEGIHYFTSLKKDYGIEPVM 578
            H G   E IH F +L+    ++P +
Sbjct: 424 LHYG---EEIHGF-ALRNGLAVDPFI 445


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/672 (40%), Positives = 420/672 (62%), Gaps = 3/672 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +LK CG V   + GKEIHG ++  G   D+F    ++ MY +C  +E A  +FD+M ERD
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW+T++   ++N   ++AL+L+  M+    R   + +VS++   A+  ++R+GKA+H 
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 264 YAMRAGFDSIVNV--STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           Y +R   +  + V  +TAL+DMYAKCG +  AR +F+G+  + VVSW +MIA  +     
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EE  ++F +M ++ + P  +T++  +  C   G L+ G  +H  + +      +++  +L
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + MY KC  +  A  +F   Q + ++ W AM+  YAQ   +++A N F +MR+  ++P  
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 399

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T+VS++   A    +   KW+H+ + +   E +  + TAL+DMYAKCG +  A  LF  
Sbjct: 400 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 459

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
              R +  WN +I G+  HG G+ A+++F +M     KPNDITF+  + ACSH+GLV EG
Sbjct: 460 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 519

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
              F  +   +G+ P ++HYG MVDLLGRAG L+EA + I+ MPI+P   V+GA++ AC+
Sbjct: 520 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 579

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +HKN +LGE AA +L E++P+  GY+VL++NIYAAA+ W   A VR  M+  G++K PG 
Sbjct: 580 LHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGH 639

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S++E+   VH F  G   HPQ +RI   L  +  ++  AGYVPDT+++  ++++  +E  
Sbjct: 640 SVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETA 699

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L+ HSEKLA+AFGL++++P + I I KNLRVC DCH ATK +S + GR IIVRD +RFH 
Sbjct: 700 LTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHH 759

Query: 801 FKNGVCSCGDYW 812
           F+ G CSCGDYW
Sbjct: 760 FREGYCSCGDYW 771



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 248/500 (49%), Gaps = 39/500 (7%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           + I   ++K GL         L+ ++ +   +  A  VF+ + ++    + TM++  ++ 
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS--LDLF 174
              D A+  +  M +  V P       ++ +  D   +R GK +H  +I N  +  + + 
Sbjct: 174 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVP 233

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
             T +++MYAKCG +  A ++F+ + ++ +VSW  ++AG  ++   E    L  RM EE 
Sbjct: 234 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 293

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              + IT++S++      G+L++GK +H Y +R GF   + ++TALVDMY KC  +  AR
Sbjct: 294 IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNAR 353

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            +FD  ++R+V+ W +M++AY +    ++A  +F +M   GV PT VTI+  L  CA  G
Sbjct: 354 ALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAG 413

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            L+ G +VH  +D+ ++  D  +  +L+ MY+KC  ++ A  +F +   + +  WNA+I 
Sbjct: 414 ALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 473

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           G+A +G   EAL+ F +M  + +KP+  T + ++ A +   ++   K          FEK
Sbjct: 474 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK--------KLFEK 525

Query: 475 NV--FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
            V  F +   I+ Y                          M+D  G  GL   A E+   
Sbjct: 526 MVHTFGLVPQIEHYG------------------------CMVDLLGRAGLLDEAHEMIKS 561

Query: 533 MLEGPTKPNDITFLCAISAC 552
           M   P KPN I +   ++AC
Sbjct: 562 M---PIKPNTIVWGALVAAC 578



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 214/404 (52%), Gaps = 17/404 (4%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L A   V   ++GK +HG+ ++ G D  V V  AL+ MY +C  VE ARLVFD M  R
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +VVSW++MI +       + A+ + ++M    V P+ V ++  ++  AD  ++  G  +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 364 KLL----DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +    +   +G  V  T +L+ MY+KC  +  A  +F+ L  KT+VSW AMI G  ++
Sbjct: 219 AYVIRNSNNEHMG--VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRS 276

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R+ E    F +M+ +NI P+  TM+S+I        ++  K +HA ++R+ F  ++ + 
Sbjct: 277 NRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALA 336

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TAL+DMY KC  +  ARALFD    R V  W  M+  Y        A  LF++M     +
Sbjct: 337 TALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 396

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           P  +T +  +S C+ +G ++ G  +H +   K+   ++ +++   A+VD+  + G +N A
Sbjct: 397 PTKVTIVSLLSLCAVAGALDLGKWVHSYID-KERVEVDCILN--TALVDMYAKCGDINAA 453

Query: 598 WD-FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
              FI+   I   I ++ A++    +H     GE+A +   E++
Sbjct: 454 GRLFIE--AISRDICMWNAIITGFAMHG---YGEEALDIFAEME 492



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 15/305 (4%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++   I+++G        T LV ++ K + + +A  +F+   ++   ++  ML  YA+ 
Sbjct: 318 KQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA 377

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
             +D A +   +MR   V P       LL +C   G +  GK +H  +      +D    
Sbjct: 378 NCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN 437

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           T +V+MYAKCG I  A ++F     RD+  WN I+ GFA +G+ E ALD+   M  +G +
Sbjct: 438 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497

Query: 237 GDFITIVSILPAVANVGSLRIGKA-----VHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            + IT + +L A ++ G +  GK      VH +    G    +     +VD+  + G ++
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF----GLVPQIEHYGCMVDLLGRAGLLD 553

Query: 292 TARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---TIMEAL 347
            A  +   M  + N + W +++AA     NP+       ++L+  +EP N     +M  +
Sbjct: 554 EAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE--IEPENCGYNVLMSNI 611

Query: 348 HACAD 352
           +A A+
Sbjct: 612 YAAAN 616


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 271/658 (41%), Positives = 420/658 (63%), Gaps = 4/658 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           ++IH +L+V G     F +T +++  +  G I  A ++FD +P   +  WN I+ G+++N
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + AL + ++M       D  T   +L A   +  L++G+ VH    R GF++ V V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 278 TALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
             L+ +YAKC R+  AR VF+G+    R +VSW ++++AY + G P EA+ IF +M    
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V+P  V ++  L+A   L DLE+G  +H  + ++ L T+  +  SL +MY+KC +V  A 
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F K++   L+ WNAMI GYA+NG   +A++ F +M +K+++PD+ ++ S I A A++ 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  A+W+   V RS +  +VF+ +ALIDM+AKCG+V  AR++FD   +R V  W+ MI 
Sbjct: 338 SLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIV 397

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GYG HG  + A+ L+  M      PND+TFL  + AC+HSG+V EG  +F  +  D+ I 
Sbjct: 398 GYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKIN 456

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P   HY  ++DLLGRAG L++A++ I+ MP++PG+TV+GA+L ACK H++VELG+ AA +
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQ 516

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           LF +DP   G++V L+N+YAAA +WD++A+VR  M++KGL K  GCS VE++  +  F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRV 576

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HP+ + I   +E +   +K  G+V + + S+HD+ D   E  L SHSE++ IA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGL 636

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++  G+T+ I KNLR C +CH ATK IS + GREI+VRD +RFH FK+GVCSCGDYW
Sbjct: 637 ISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 270/495 (54%), Gaps = 7/495 (1%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++  T   +LR+I   ++  GL       TKL+     Y  ++ A +VF+ +P    
Sbjct: 25  ASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQV 84

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ +++GY++     DA+    +M+   V+P  + + +LLK CG +  ++ G+ +H Q
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQ 144

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNTIVAGFAQNGFAE 221
           +   GF  D+F   G++ +YAKC ++  A  +F+   +PER +VSW  IV+ +AQNG   
Sbjct: 145 VFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPV 204

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL++ ++M +   + D + +VS+L A   +  L  G+++H   M+ G ++  ++  +L 
Sbjct: 205 EALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLN 264

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MYAKCG+V TA+++FD MKS N++ WN+MI+ Y + G  ++A+ +F +M+++ V P  +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTI 324

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +I  A+ ACA +G LE+  ++ + + +     DV ++++LI M++KC  V+ A  +F + 
Sbjct: 325 SITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT 384

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + +V W+AMI+GY  +G+  EA++ +  M    + P+  T + ++ A     ++R   
Sbjct: 385 LDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           W    +              +ID+  + G +  A  +   M  +  VT W  ++     H
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504

Query: 521 ---GLGK-AAVELFN 531
               LGK AA +LF+
Sbjct: 505 RHVELGKYAAQQLFS 519


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 302/789 (38%), Positives = 448/789 (56%), Gaps = 6/789 (0%)

Query: 28   LSQRAYIPSRIYRHPSALLLEVCT-SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
            + +  +IP+  Y + S L       +L+ ++ +    + +GL         LV ++ K  
Sbjct: 311  MQREGFIPNS-YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 369

Query: 87   SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            S+ DA  VF+ + ++    +  M+ G A+     +A S  ++M+ +   P +  Y  +L 
Sbjct: 370  SIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILN 429

Query: 147  VCG--DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
                     +   K +H      GF  DL     +++MYAKCG I++A  +FD M +RD+
Sbjct: 430  ASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDV 489

Query: 205  VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            +SWN ++ G AQNG    A  +  +M +EG   D  T +S+L    +  +L     VH +
Sbjct: 490  ISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKH 549

Query: 265  AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            A+  G  S   V +A + MY +CG ++ ARL+FD +  R+V +WN+MI    +     EA
Sbjct: 550  AVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREA 609

Query: 325  MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
            + +F +M  +G  P   T +  L A  D   LE    VH       L  D+ + N+L+  
Sbjct: 610  LSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHT 668

Query: 385  YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
            YSKC  V  A  +F  +  + + +W  MI G AQ+G  ++A ++F +M  + I PD+ T 
Sbjct: 669  YSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTY 728

Query: 445  VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            VS++ A A    + + K +H   + +    ++ V  AL+ MYAKCG++  AR++FD M E
Sbjct: 729  VSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVE 788

Query: 505  RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
            R V +W VMI G   HG G  A++ F KM     KPN  +++  ++ACSH+GLV+EG   
Sbjct: 789  RDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQ 848

Query: 565  FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
            F S+ +DYGIEP M+HY  MVDLLGRAG L EA  FI  MPIEP    +GA+LGAC  + 
Sbjct: 849  FLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYG 908

Query: 625  NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
            N+E+ E AA    +L P     +VLL+NIYAA   W++   VR++M++KG++K PG S +
Sbjct: 909  NLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWI 968

Query: 685  ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSS 743
            E+ N +HSF  G T HP+SK IY  L  LI+ +KA GYVPDT  +  + +   +E  L S
Sbjct: 969  EVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCS 1028

Query: 744  HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
            HSEKLAI +GL+++     I + KNLRVC DCH ATK+IS +TGREI+ RD  RFH FK+
Sbjct: 1029 HSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKD 1088

Query: 804  GVCSCGDYW 812
            GVCSCGDYW
Sbjct: 1089 GVCSCGDYW 1097



 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 192/586 (32%), Positives = 308/586 (52%), Gaps = 14/586 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +L+ C   +++   +++   IIKSG+ +Q+L+   KL+ ++ +   L  A +VF+ +  K
Sbjct: 124 ILQRCLKQEDILLAKQVHVCIIKSGM-EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKK 182

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ TM+ GYA++   +DA+    +MR +   P    Y  +LK C     ++ GK+IH
Sbjct: 183 NIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIH 242

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +I +GF  D+   T +VNMY KCG IE+A  +FD+M ER+++SW  ++ G A  G  +
Sbjct: 243 AHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQ 302

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A  L  +M  EG   +  T VSIL A A+ G+L   K VH +A+ AG    + V  ALV
Sbjct: 303 EAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALV 362

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MYAK G ++ AR+VFDGM  R++ SW  MI    + G  +EA  +F +M   G  P   
Sbjct: 363 HMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLT 422

Query: 342 TIMEALHAC--ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           T +  L+A   A    LE    VHK  ++    +D+ + N+LI MY+KC  +D A  +F 
Sbjct: 423 TYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFD 482

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +  + ++SWNAM+ G AQNG  +EA   F +M+ + + PDS T +S++        + +
Sbjct: 483 GMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEW 542

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              +H   + +    +  V +A I MY +CG++  AR LFD ++ RHVTTWN MI G   
Sbjct: 543 VNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQ 602

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
              G+ A+ LF +M      P+  TF+  +SA     + EE + +   +        ++D
Sbjct: 603 QRCGREALSLFLQMQREGFIPDATTFINILSA----NVDEEALEWVKEVHSHATDAGLVD 658

Query: 580 HY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
                A+V    + G +  A      M +E  +T +  M+G    H
Sbjct: 659 LRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQH 703



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/555 (30%), Positives = 289/555 (52%), Gaps = 23/555 (4%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           DAV+ L       +A   ++Y  +L+ C    +I   K++H  +I +G   +L+    ++
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            +Y +CG+++ A ++FD++ ++++  W T++ G+A+ G AE A+ +  +M +E  + + I
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T +SIL A     +L+ GK +H + +++GF S V V TALV+MY KCG +E A+L+FD M
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             RNV+SW  MI      G  +EA  +F +M  +G  P + T +  L+A A  G LE   
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVK 340

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH       L  D+ + N+L+ MY+K   +D A  +F  +  + + SW  MI G AQ+G
Sbjct: 341 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHG 400

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVI--PALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           R  EA + F +M+     P+  T +S++   A+A  S + + K +H     + F  ++ +
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             ALI MYAKCG++  AR +FD M +R V +WN M+ G   +G G  A  +F +M +   
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520

Query: 539 KPNDITFLCAISACSHSGLVE--EGIHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
            P+  T+L  ++    +  +E    +H     T L  D+ +        A + +  R G 
Sbjct: 521 VPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGS------AFIHMYIRCGS 574

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----PDEGGY-H 647
           +++A     K+ +   +T + AM+G     +    G +A +   ++      PD   + +
Sbjct: 575 IDDARLLFDKLSVRH-VTTWNAMIGGAAQQR---CGREALSLFLQMQREGFIPDATTFIN 630

Query: 648 VLLANIYAAASMWDK 662
           +L AN+   A  W K
Sbjct: 631 ILSANVDEEALEWVK 645



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 157/304 (51%), Gaps = 2/304 (0%)

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             ++A+ + +  + QG+   + + +  L  C    D+     VH  + +  +  ++ + N
Sbjct: 98  TAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            L+ +Y +C ++  A  +F KL  K +  W  MI GYA+ G   +A+  + KMR +  +P
Sbjct: 158 KLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQP 217

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T +S++ A      +++ K IHA +I+S F+ +V V TAL++MY KCG++  A+ +F
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M ER+V +W VMI G   +G G+ A  LF +M      PN  T++  ++A + +G + 
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL- 336

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           E +    S   + G+   +    A+V +  ++G +++A      M  E  I  +  M+G 
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGG 395

Query: 620 CKIH 623
              H
Sbjct: 396 LAQH 399


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/791 (37%), Positives = 459/791 (58%), Gaps = 48/791 (6%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA-------RVFEPI 98
           L+ + ++L  L ++L + + SG     L      SL  +Y SL           R F P 
Sbjct: 30  LISLSSTLGHLDQLLAVSLASG--HYTLDHAPASSLLLRYASLRSPPAHLLRLYRAF-PR 86

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG- 157
           PD+   L +++L+              L  +R D + P   ++++            RG 
Sbjct: 87  PDRF--LRNSLLRS-------------LPTLRADLLFPSPDSFSFAFAATSLASSCSRGG 131

Query: 158 -----------KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
                      + +H   + +GF+ D F  + +  +Y    +  +A K+FD +P  D V 
Sbjct: 132 ISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVL 191

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           WNT++AG + +     AL+   RM   G  R D  T+ S+LPA A V +  +G+ VH + 
Sbjct: 192 WNTLLAGLSGSE----ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFG 247

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
            + G     +V T L+ +YAKCG +E AR +FD M+  ++V++N++I+ Y   G    ++
Sbjct: 248 EKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSV 307

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F++++  G+ P++ T++  +   +  G       +H  + +  L  +  ++ +L ++Y
Sbjct: 308 ELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLY 367

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
            +   +D A   F  +  KT+ SWNAMI GYAQNG    A+  F +M++ N++P+  T+ 
Sbjct: 368 CRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTIS 427

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           S + A A+L  +   KW+H ++     E NV+VMTALIDMY KCG++  AR +FD M+ +
Sbjct: 428 SALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK 487

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
           +V +WNVMI GYG HG G  A++L+  M++    P   TFL  + ACSH GLV+EG   F
Sbjct: 488 NVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVF 547

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACKI 622
            S+  DYGI P ++H   MVDLLGRAG+L EA++ I + P   + PGI  +GA+LGAC +
Sbjct: 548 RSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGI--WGALLGACMV 605

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
           HK+ +L + A+ +LFEL+P+  GY+VLL+N+Y +   + + A VR   + + L KTPGC+
Sbjct: 606 HKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCT 665

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLL 741
           L+E+ +  H F +G   HPQS  IY +LE L  ++  AGY PDT  +++DVE+  +E+++
Sbjct: 666 LIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMV 725

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
             HSEKLAIAFGLLN+ PG+ I I KNLRVC DCHNATK IS VT R I+VRD  RFH F
Sbjct: 726 KVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHF 785

Query: 802 KNGVCSCGDYW 812
           ++GVCSCGDYW
Sbjct: 786 RDGVCSCGDYW 796


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 281/696 (40%), Positives = 431/696 (61%), Gaps = 1/696 (0%)

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           +L +A+  L+      +    + Y  +LK C    ++   K++H  +I +    +   M 
Sbjct: 8   TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            ++++Y +CG+++EA  +FD + ++   SWN ++AG+ ++  AE A+ L   M  EG + 
Sbjct: 68  NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           +  T + IL A A++ +L+ GK VH      G +S V V TAL+ MY KCG +  AR +F
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D + + +++SW  MI AY + GN +EA R+  +M  +G +P  +T +  L+ACA  G L+
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
               VH+      L  DV +  +L+ MY+K   +D A  +F +++ + +VSWN MI  +A
Sbjct: 248 WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFA 307

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           ++GR +EA + F +M+++  KPD+   +S++ A A    + + K IH   + S  E +V 
Sbjct: 308 EHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR 367

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V TAL+ MY+K G++  AR +FD M  R+V +WN MI G   HGLG+ A+E+F +M    
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            KP+ +TF+  +SACSH+GLV+EG   + ++ + YGIEP + H   MVDLLGRAGRL EA
Sbjct: 428 VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA 487

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
             FI  M ++P    +GA+LG+C+ + NVELGE  A    +LDP     +VLL+NIYA A
Sbjct: 488 KLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEA 547

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             WD ++ VRT+M ++G++K PG S +E+ N++H F    + HP+ K I    + +I++I
Sbjct: 548 GKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKI 607

Query: 718 KAAGYVPDTNSIHDVEDYVQENL-LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           KA GY+PDT  +   ++   + L + SHSEKLAI +GL+++ PG+ I + KNLRVC DCH
Sbjct: 608 KAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCH 667

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            ATK IS V GREIIVRD +RFH FK+GVCSCGDYW
Sbjct: 668 GATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/481 (33%), Positives = 259/481 (53%), Gaps = 5/481 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C   K+L   +++   IIKS +         L+ ++ +   L +A  VF+ +  K 
Sbjct: 34  VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKS 93

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            A ++ M+ GY +    +DA+     M ++ V P    Y  +LK C  +  ++ GKE+H 
Sbjct: 94  GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA 153

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +   G   D+   T ++ MY KCG I EA ++FD +   D++SW  ++  +AQ+G  + 
Sbjct: 154 CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKE 213

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L+ +M +EG + + IT VSIL A A+ G+L+  K VH +A+ AG +  V V TALV 
Sbjct: 214 AYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQ 273

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G ++ AR+VFD MK R+VVSWN MI A+ E G   EA  +F +M  +G +P  + 
Sbjct: 274 MYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIM 333

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L+ACA  G LE    +H+      L  DV +  +L+ MYSK   +D A  +F +++
Sbjct: 334 FLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK 393

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSWNAMI G AQ+G   +AL  F +M +  +KPD  T V+V+ A +   ++   + 
Sbjct: 394 VRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRS 453

Query: 463 IH-ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            + A+      E +V     ++D+  + G +  A+   D M  +    TW  ++    T+
Sbjct: 454 QYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTY 513

Query: 521 G 521
           G
Sbjct: 514 G 514


>gi|298205132|emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/440 (62%), Positives = 335/440 (76%), Gaps = 31/440 (7%)

Query: 27  TLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           T S R YIPS +Y+HPSA+LLE+CTS+KEL + +PLIIK+GL  +HLFQTKLVSLFCK+ 
Sbjct: 70  TPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFG 129

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           SL +AARVF+PI DK+D LYHTMLKGYA+ +SLDDAVSF  RMRYD V PVVYN+TYLLK
Sbjct: 130 SLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLK 189

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
           VCGD  ++R+GKEIH QLIVNGF+ ++FAMTGVVNMYAKC  +EEAYKMFDRMPERDLV 
Sbjct: 190 VCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVC 249

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNTI++G+AQNGF + AL+LV RM EEG+R D ITIVSILPAVA+VGSLRIG+++HGY+M
Sbjct: 250 WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 309

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           RAGF+S VNVSTALVDMY+KCG V TARL+FD M                       AM 
Sbjct: 310 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT----------------------AME 347

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           IFQKM+D+ VE TNVT+M ALHACADLGD+E+G FVHKLLDQL+LG+DVS+ NSLISMYS
Sbjct: 348 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 407

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KCK+      +F  +  + + +WNAMI GY  +G    AL  F KM+ + IKP+  T + 
Sbjct: 408 KCKR------LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLC 461

Query: 447 VIPALAELSVIRYAKWIHAL 466
             P     SV+     +H  
Sbjct: 462 KTPG---WSVVELQNEVHTF 478



 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/535 (41%), Positives = 311/535 (58%), Gaps = 56/535 (10%)

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T LV ++ K G +  A  VF  ++ +    +++M+  Y    + ++A+  F +M   GV 
Sbjct: 119 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 178

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P        L  C D  DL +G  +H  L      ++V     +++MY+KC+ V+ A  +
Sbjct: 179 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 238

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++  + LV WN +I GYAQNG    AL    +M+ +  +PDS T+VS++PA+A++  +
Sbjct: 239 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 298

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           R  + IH   +R+ FE  V V TAL+DMY+KCG+VGTAR +FD M               
Sbjct: 299 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRM--------------- 343

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
                   A+E+F KM++   +  ++T + A+ AC+  G VE+G  +   L     +   
Sbjct: 344 -------TAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG-RFVHKLLDQLELGSD 395

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           +    +++ +  +  RL +  D       E  +T + AM+     H    LG KAA  LF
Sbjct: 396 VSVMNSLISMYSKCKRLFDMMD-------ERHVTTWNAMIDGYGTHG---LG-KAALELF 444

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           E    E    V+  N                  E   L KTPG S+VEL+NEVH+FYSG+
Sbjct: 445 EKMKKE----VIKPN------------------EVTFLCKTPGWSVVELQNEVHTFYSGT 482

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
           T HPQ+K+IY FLETL + IKAAGY+PDTNS+HDVED V+E LL+SHSEKLAIAF LLN+
Sbjct: 483 TSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNT 542

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           SPG+TIH+RKNLRVCGDCHNATKYISLVT REIIVRDM RFH FK+G CSCGDYW
Sbjct: 543 SPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 597


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/647 (43%), Positives = 417/647 (64%), Gaps = 9/647 (1%)

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F    +V+ Y + G+I EAYK+FD M ERD+ +WN +++G  +N  A  A+ L  RM  
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG  GD +T+ S+LP    +G   +   +H YA++ G D  + V  AL+D+Y K G +E 
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VF GM+ R++V+WNS+I+   + G    A+++FQ M   GV P  +T++    A A 
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 353 LGDLERGIFVHKLLDQLKLGTDVS---MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
            GD      +H  +  ++ G DV      N+++ MY+K   ++ A  +F  +  +  VSW
Sbjct: 283 GGDGRSAKSLHCYV--MRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSW 340

Query: 410 NAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           N +I GY QNG  NEA+  +  M + + +K    T VSV+PA + L  ++    +HAL I
Sbjct: 341 NTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSI 400

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +     +V+V T LID+YAKCG +  A  LF+ M  R    WN +I G G HG G  A+ 
Sbjct: 401 KIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALT 460

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF++M +   KP+ +TF+  ++ACSH+GLV++G  +F  ++  Y I P+  HY  M D+L
Sbjct: 461 LFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADML 520

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAG+L+EA++FIQ MPI+P   V+GA+LGAC+IH NVE+G+ A+  LFELDP+  GY+V
Sbjct: 521 GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYV 580

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG--STKHPQSKRI 706
           L++N+YA    WD + +VR+++ ++ LQKTPG S +E+K  V+ FYSG  +  HPQ + I
Sbjct: 581 LMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEI 640

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
              L +L+ +I++ GYV D + +  DVED  +E++L++HSE+LAIAFG++N+   + +HI
Sbjct: 641 QAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHI 700

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVCGDCHNATKYIS +T REIIVRD +RFH FK+G CSCGD+W
Sbjct: 701 YKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 139/268 (51%), Gaps = 7/268 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAP 136
           +V ++ K +++  A R+F+ +P +    ++T++ GY +    ++AV     M +++ +  
Sbjct: 312 IVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKA 371

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
           +   +  +L     +G +++G  +H   I  G ++D++  T ++++YAKCG++ EA  +F
Sbjct: 372 IQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLF 431

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           ++MP R    WN I++G   +G    AL L +RM +EG + D +T VS+L A ++ G + 
Sbjct: 432 EKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVD 491

Query: 257 IGKAVHGYAMRAGFD--SIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
            G++     M+  +D   I      + DM  + G+++ A      M  + +   W +++ 
Sbjct: 492 QGRSFFD-VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLG 550

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           A    GN E      Q + +  ++P NV
Sbjct: 551 ACRIHGNVEMGKVASQNLFE--LDPENV 576



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCFEKNVFVMTALIDMYAKCGAVGTA 495
            +PD FT  S+I A    +    A  +HA  +R      +VF   +L+  Y + G +  A
Sbjct: 66  FRPDGFTFPSLIRAAPSNA---SAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEA 122

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +FD M+ER V  WN M+ G   +     AV LF +M+      + +T    +  C   
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182

Query: 556 G-LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           G  V   + +  ++K  +G++  +    A++D+ G+ G L EA      M     +T + 
Sbjct: 183 GDQVLALVMHVYAVK--HGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVT-WN 239

Query: 615 AMLGACK 621
           +++  C+
Sbjct: 240 SIISGCE 246



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L++  R+  L IK GL       T L+ L+ K   L++A  +FE +P +    ++ ++ 
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G        +A++   RM+ + + P    +  LL  C   G + +G+     + V   + 
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQV---TY 504

Query: 172 DLFAMTG----VVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELA 223
           D+  +      + +M  + GQ++EA+     MP + D   W  ++     +G  E+ 
Sbjct: 505 DIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMG 561


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 290/734 (39%), Positives = 445/734 (60%), Gaps = 4/734 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++     A RVF  +P++    ++ M+ GY K   LD+A+    RM +  V P 
Sbjct: 129 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPD 188

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG V + R G+E+H  ++  GF  ++  +  ++ MYAKCG +  A K+FD
Sbjct: 189 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFD 248

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +NG     L+L   M  +  + + +TI S+  A   +  +  
Sbjct: 249 SMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTF 308

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +HG A++ GF   V    +L+ MYA  G +  AR VF  M +R+ ++W +MI+ Y +
Sbjct: 309 AKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEK 368

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P ++TI  AL ACA LG L+ G+ +H+L +     + + +
Sbjct: 369 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVV 428

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           TN+++ MY+K K++D+A ++F  +  K +VSW++MI G+  N R  EAL YF  M + ++
Sbjct: 429 TNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DV 487

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R   E   ++  ALID+Y KCG  G A A
Sbjct: 488 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWA 547

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F     + V +WN+MI G+  HG G  A+  FN+M++    P+++TF+  + ACS  G+
Sbjct: 548 QFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGM 607

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V EG   F S+ + Y I P + HY  MVDLL RAG+L EA++FI +MPI P   V+GA+L
Sbjct: 608 VSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALL 667

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
             C+IH++VELGE AA  +  L+P++ GYHVLL ++YA A +WDKLA+VR  M +KGL  
Sbjct: 668 NGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDH 727

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYV- 736
             GCS VE+K  VH+F +    HPQ + I T LE + + +KA+GY P  +  H  ED V 
Sbjct: 728 DSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES--HCPEDEVL 785

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           ++++   HSE+LA+AFGL+N++PG++I + KN   C  CH   K IS +  R+IIVRD  
Sbjct: 786 KDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVRDSK 845

Query: 797 RFHCFKNGVCSCGD 810
           + H FK+G CSCGD
Sbjct: 846 QLHHFKDGSCSCGD 859



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 253/506 (50%), Gaps = 20/506 (3%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +   +++ G  ++      L++++ K   +  A +VF+ +       ++ M+ G+ + 
Sbjct: 209 REVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFEN 268

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              +  +   + M +D+V P +   T +    G + ++   KE+HG  +  GF+ D+   
Sbjct: 269 GECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFC 328

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++ MYA  G + +A  +F RM  RD ++W  +++G+ +NGF + AL++   M      
Sbjct: 329 NSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVS 388

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D ITI S L A A +GSL +G  +H  A   GF S + V+ A+++MYAK  R++ A  V
Sbjct: 389 PDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEV 448

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  M  ++VVSW+SMIA +       EA+  F+ ML   V+P +VT + AL ACA  G L
Sbjct: 449 FKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGAL 507

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  +H  + +  +  +  + N+LI +Y KC +   A   F     K +VSWN MI G+
Sbjct: 508 RSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 567

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKN 475
             +G  + AL++F +M      PD  T V+++ A +   ++    +  H++  +     N
Sbjct: 568 VAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPN 627

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVT----TWNVMIDGYGTH---GLGKAAVE 528
           +     ++D+ ++ G +  A   ++ +NE  +T     W  +++G   H    LG+ A +
Sbjct: 628 LKHYACMVDLLSRAGQLTEA---YNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAK 684

Query: 529 LFNKMLEGPTKPNDITF---LCAISA 551
               +     +PND  +   LC + A
Sbjct: 685 YVLAL-----EPNDAGYHVLLCDLYA 705



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 178/354 (50%), Gaps = 1/354 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +  A++ M  + G    A  VF  M  R+V SWN M+  Y + G  +EA+ ++ +M+ 
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            GV P   T    L +C  + D   G  VH  + +   G +V + N+L++MY+KC  V  
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  +     +SWNAMI G+ +NG  N  L  F  M    ++P+  T+ SV  A   
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS + +AK +H L ++  F  +V    +LI MYA  G +  AR +F  M+ R   TW  M
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G    A+E++  M      P+DIT   A++AC+  G ++ G+     L +  G
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHELAESKG 421

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               +    A++++  ++ R+++A +  + M  +  ++    + G C  H+N E
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFE 475


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/736 (38%), Positives = 450/736 (61%), Gaps = 7/736 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY-DDVAP 136
            +++F ++ +L DA  VF  + ++    ++ ++ GYAK    D+A+    RM +   V P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            VY +  +L+ CG + ++ RGKE+H  ++  G+ LD+  +  ++ MY KCG ++ A  +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           DRMP RD++SWN +++G+ +NG     L+L   M       D +T+ S++ A   +G  R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           +G+ +H Y +  GF   ++V  +L  MY   G    A  +F  M+ +++VSW +MI+ Y 
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
               P++A+  ++ M    V+P  +T+   L ACA LGDL+ G+ +HKL  + +L + V 
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+LI+MYSKCK +D+A DIF  +  K ++SW ++I G   N R  EAL +  +M+   
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MT 493

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P++ T+ + + A A +  +   K IHA V+R+    + F+  AL+DMY +CG + TA 
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
           + F+   ++ VT+WN+++ GY   G G   VELF++M++   +P++ITF+  +  CS S 
Sbjct: 554 SQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ 612

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           +V +G+ YF+ + +DYG+ P + HY  +VDLLGRAG L EA  FIQKMP+ P   V+GA+
Sbjct: 613 MVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L AC+IH  ++LGE +A  +FELD    GY++LL N+YA    W ++AKVR +M++ GL 
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY--VPDTNSIHDVED 734
              GCS VE+K +VH+F S    HPQ+K I T LE   +++   G   + +++S+ + E 
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETE- 790

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             ++ +   HSE+ AIAFGL+N+ PG  I + KNL +C +CH+  K+IS    REI VRD
Sbjct: 791 ISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRD 850

Query: 795 MHRFHCFKNGVCSCGD 810
              FH FK+G CSCGD
Sbjct: 851 AEHFHHFKDGECSCGD 866



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 254/492 (51%), Gaps = 7/492 (1%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L G      L++A+  L  M+   VA     +  L+++C        G +++   + +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           SL +      + M+ + G + +A+ +F +M ER+L SWN +V G+A+ G+ + A+ L  R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 230 M-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M    G + D  T   +L     +  L  GK VH + +R G++  ++V  AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            V++ARL+FD M  R+++SWN+MI+ Y E G   E + +F  M    V+P  +T+   + 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           AC  LGD   G  +H  +       D+S+ NSL  MY        A  +FS+++ K +VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W  MI GY  N   ++A++ +  M   ++KPD  T+ +V+ A A L  +     +H L I
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           ++     V V   LI+MY+KC  +  A  +F  +  ++V +W  +I G   +     A+ 
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL- 484

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVD 586
           +F + ++   +PN IT   A++AC+  G +  G  IH    L+   G++  + +  A++D
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGVGLDDFLPN--ALLD 541

Query: 587 LLGRAGRLNEAW 598
           +  R GR+N AW
Sbjct: 542 MYVRCGRMNTAW 553



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 2/345 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R I   +I +G          L  ++    S  +A ++F  +  K    + TM+ GY   
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              D A+     M  D V P       +L  C  +G++  G E+H   I       +   
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++NMY+KC  I++A  +F  +P ++++SW +I+AG   N     AL  + +M +   +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQ 495

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + IT+ + L A A +G+L  GK +H + +R G      +  AL+DMY +CGR+ TA   
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+  K ++V SWN ++  Y E G     + +F +M+   V P  +T +  L  C+    +
Sbjct: 556 FNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +G+     ++   +  ++     ++ +  +  ++  A     K+
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/771 (36%), Positives = 453/771 (58%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT ++  +   ++   I+K GL  +      LV+L+ ++ +L  A ++F  +  + 
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              Y++++ G A+    D A+    +M+ D + P       LL  C  VG   +GK++H 
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  G S DL     ++++Y KC  IE A++ F      ++V WN ++  + Q G    
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +  +  +M  EG   +  T  SIL    ++G+L +G+ +H   +++GF   V V + L+D
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLID 458

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G ++TAR +   ++  +VVSW +MIA Y +     EA+++FQ+M +QG+   N+ 
Sbjct: 459 MYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIG 518

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
              A+ ACA +  L +G  +H          D+S+ N+L+S+Y++C +   A   F K+ 
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  +SWNA+I G+AQ+G   EAL  F +M    ++ + FT  S + A A  + I+  K 
Sbjct: 579 AKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ 638

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA++I++ ++        LI +Y+KCG++  A+  F  M E++V +WN MI GY  HG 
Sbjct: 639 IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGY 698

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  AV LF +M +    PN +TF+  +SACSH GLV EG+ YF S+ K++G+ P  +HY 
Sbjct: 699 GSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYV 758

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VDLLGRA  L  A +FI++MPIEP   ++  +L AC +HKN+E+GE AA  L EL+P+
Sbjct: 759 CVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPE 818

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N+YA +  WD   + R +M+ +G++K PG S +E+KN +H+F+ G   HP 
Sbjct: 819 DSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPL 878

Query: 703 SKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +++IY +++ L +     GYV D  N ++DVE   ++     HSEKLA+AFGLL+ +   
Sbjct: 879 AEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTM 938

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I + KNLRVC DCHN  K++S ++ R I+VRD +RFH F+ GVCSC DYW
Sbjct: 939 PIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 318/627 (50%), Gaps = 20/627 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           II  G     L    L+ L+ K   +  A  VFE +  K    +  M+ G ++    D+A
Sbjct: 138 IIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEA 197

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +    +M    V P  Y ++ +L  C  +   + G+++HG ++  G S + F    +V +
Sbjct: 198 ILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL 257

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y++ G +  A ++F +M  RD +S+N++++G AQ GF++ AL L  +M  +  + D +T+
Sbjct: 258 YSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTV 317

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+L A A+VG+   GK +H Y ++ G  S + +  +L+D+Y KC  +ETA   F   ++
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTET 377

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            NVV WN M+ AY + GN  E+  IF +M  +G+ P   T    L  C  LG L+ G  +
Sbjct: 378 ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI 437

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + +     +V + + LI MY+K  ++D A  I  +L+ + +VSW AMI GY Q+   
Sbjct: 438 HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLF 497

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EAL  F +M ++ I+ D+    S I A A +  +   + IHA    S + +++ +  AL
Sbjct: 498 AEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNAL 557

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           + +YA+CG    A   F+ ++ +   +WN +I G+   G  + A+++F++M +   + N 
Sbjct: 558 VSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANL 617

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            TF  A+SA +++  +++G      + K  G +   +    ++ L  + G + +A     
Sbjct: 618 FTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFF 676

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE------LDPDEGGYHVLLANIYAA 656
           +MP E  +  + AM+     H     G +A + LFE      L P+    HV    + +A
Sbjct: 677 EMP-EKNVVSWNAMITGYSQHG---YGSEAVS-LFEEMKQLGLMPN----HVTFVGVLSA 727

Query: 657 AS----MWDKLAKVRTIMEKKGLQKTP 679
            S    + + L+  R++ ++ GL   P
Sbjct: 728 CSHVGLVNEGLSYFRSMSKEHGLVPKP 754



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 298/575 (51%), Gaps = 15/575 (2%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L E C    SL + +++   I KSG   + +  ++L+ ++  +  + +A ++F+ IP   
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEIH 161
            + ++ ++ G          +     M  ++V P    +  +L+ C G     +  ++IH
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            ++I +GF         ++++Y+K G ++ A  +F+R+  +D VSW  +++G +QNG  +
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+ L  +MH+           S+L A   +   ++G+ +HG+ ++ G  S   V  ALV
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            +Y++ G +  A  +F  M  R+ +S+NS+I+   + G  + A+++F+KM    ++P  V
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L ACA +G   +G  +H  + ++ + +D+ +  SL+ +Y KC  ++ A + F   
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +V WN M++ Y Q G ++E+   F +M+ + + P+ +T  S++     L  +   +
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  VI+S F+ NV+V + LIDMYAK G + TAR +   + E  V +W  MI GY  H 
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH---YFTSLKKDYGIEP 576
           L   A++LF +M     + ++I F  AISAC+    + +G  IH   Y +   +D  I  
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG- 554

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
                 A+V L  R GR  +A+   +K+  +  I+
Sbjct: 555 -----NALVSLYARCGRAQDAYLAFEKIDAKDNIS 584



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 241/487 (49%), Gaps = 3/487 (0%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           V  Y +L + C + G +   K++H ++  +GF  +    + ++++Y   G+++ A K+FD
Sbjct: 10  VQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN-VGSLR 256
            +P  ++  WN +++G      A   L L + M  E    D  T  S+L A +      +
Sbjct: 70  DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQ 129

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           + + +H   +  GF S   V   L+D+Y+K G V+ A+LVF+ +  ++ VSW +MI+   
Sbjct: 130 VTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G  +EA+ +F +M    V PT       L AC  +   + G  +H  + +  L ++  
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+L+++YS+   +  A  IFSK+  +  +S+N++I G AQ G  + AL  F KM+   
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +KPD  T+ S++ A A +      K +H+ VI+     ++ +  +L+D+Y KC  + TA 
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             F      +V  WNVM+  YG  G    +  +F +M      PN  T+   +  C+  G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            ++ G    T + K  G +  +     ++D+  + G L+ A   +Q++  E  +  + AM
Sbjct: 430 ALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAM 487

Query: 617 LGACKIH 623
           +     H
Sbjct: 488 IAGYTQH 494



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 217/481 (45%), Gaps = 44/481 (9%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M E G R +  T + +     N GSL   K +H    ++GFD    + + L+D+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           V+ A  +FD + S NV  WN +I+  +      + + +F  M+ + V P   T    L A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 350 CA-DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           C+      +    +H  +     G+   + N LI +YSK   VD A  +F +L  K  VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI G +QNGR +EA+  FC+M    + P  +   SV+ A  ++ + +  + +H  ++
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +       FV  AL+ +Y++ G +  A  +F  M+ R   ++N +I G    G    A++
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT---SLKKDYGIE-PVMDHYG 582
           LF KM     KP+ +T    +SAC+  G   +G  +H +     +  D  IE  ++D Y 
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 583 AMVDL------------------------LGRAGRLNEA-WDFIQKMPIE---PGITVFG 614
              D+                         G+ G L+E+ W F+Q M IE   P    + 
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQ-MQIEGLMPNQYTYP 419

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           ++L  C     ++LGE+   ++      + G+     N+Y  + + D  AK   +   +G
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVI-----KSGFQF---NVYVCSVLIDMYAKHGELDTARG 471

Query: 675 L 675
           +
Sbjct: 472 I 472


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/658 (41%), Positives = 420/658 (63%), Gaps = 4/658 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K+IH +L+V G     F +T +++  +  G I  A ++FD +P   +  WN I+ G+++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + AL + + M       D  T   +L A + +  L++G+ VH    R GFD+ V V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 278 TALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
             L+ +YAKC R+ +AR VF+G+    R +VSW ++++AY + G P EA+ IF +M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V+P  V ++  L+A   L DL++G  +H  + ++ L  +  +  SL +MY+KC +V  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F K++   L+ WNAMI GYA+NG   EA++ F +M +K+++PD+ ++ S I A A++ 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  A+ ++  V RS +  +VF+ +ALIDM+AKCG+V  AR +FD   +R V  W+ MI 
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GYG HG  + A+ L+  M  G   PND+TFL  + AC+HSG+V EG  +F  +  D+ I 
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKIN 456

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P   HY  ++DLLGRAG L++A++ I+ MP++PG+TV+GA+L ACK H++VELGE AA +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           LF +DP   G++V L+N+YAAA +WD++A+VR  M++KGL K  GCS VE++  + +F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HP+ + I   +E +   +K  G+V + + S+HD+ D   E  L SHSE++AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++  G+ + I KNLR C +CH ATK IS +  REI+VRD +RFH FK+GVCSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 268/495 (54%), Gaps = 7/495 (1%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++  T   +L++I   ++  GL       TKL+     +  ++ A +VF+ +P    
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ +++GY++     DA+     M+   V+P  + + +LLK C  +  ++ G+ +H Q
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNTIVAGFAQNGFAE 221
           +   GF  D+F   G++ +YAKC ++  A  +F+   +PER +VSW  IV+ +AQNG   
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL++ ++M +   + D++ +VS+L A   +  L+ G+++H   ++ G +   ++  +L 
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MYAKCG+V TA+++FD MKS N++ WN+MI+ Y + G   EA+ +F +M+++ V P  +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +I  A+ ACA +G LE+   +++ + +     DV ++++LI M++KC  V+ A  +F + 
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + +V W+AMI+GY  +GR  EA++ +  M    + P+  T + ++ A     ++R   
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           W    +              +ID+  + G +  A  +   M  +  VT W  ++     H
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504

Query: 521 ---GLGK-AAVELFN 531
               LG+ AA +LF+
Sbjct: 505 RHVELGEYAAQQLFS 519


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/734 (39%), Positives = 446/734 (60%), Gaps = 4/734 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++     A RVF  +P++    ++ M+ GY K   L++A+    RM +  V P 
Sbjct: 135 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPD 194

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG V + R G+E+H  ++  GF+ ++  +  ++ MYAKCG +  A K+FD
Sbjct: 195 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD 254

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +NG     L+L   M ++  + + +TI S+  A   +  +  
Sbjct: 255 SMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITF 314

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +HG A++ GF + V    +L+ MYA  G +  AR VF  M +R+ +SW +MI+ Y +
Sbjct: 315 AKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEK 374

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P ++TI  AL ACA LG L+ G+ +H+L +     + V +
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVV 434

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           TN+L+ MY+K K++D+A ++F  +  K +VSW++MI G+  N R  EAL YF  M + ++
Sbjct: 435 TNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DV 493

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R       ++  ALID+Y KCG  G A A
Sbjct: 494 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWA 553

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F     + V +WN+MI G+  HG G+ A+  FN+M++    P+++TF+  + ACS  G+
Sbjct: 554 QFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGM 613

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V EG   F S+   Y I P + HY  MVDLL R G+L EA++FI +MPI P   V+GA+L
Sbjct: 614 VSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALL 673

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
             C+IH++VELGE AA  + EL+P++ GYHVLL ++YA A +WDKLA+VR  M +KGL  
Sbjct: 674 NGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDH 733

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYV- 736
             GCS VE+K  VH+F +    HPQ + I T LE + + +KA+G  P  +  H  ED V 
Sbjct: 734 DSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES--HSPEDKVL 791

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           ++++   HSE+LA+AFGL+N++PG++I + KN   C  CH   K IS +  R+IIVRD  
Sbjct: 792 KDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIVRDSK 851

Query: 797 RFHCFKNGVCSCGD 810
           + H FK+G CSCGD
Sbjct: 852 QVHHFKDGSCSCGD 865



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 252/506 (49%), Gaps = 20/506 (3%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +   +++ G  ++      L++++ K   +  A +VF+ +       ++ M+ G+ + 
Sbjct: 215 REVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFEN 274

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              +  +   + M  D+V P +   T +    G + +I   KE+HG  +  GF+ D+   
Sbjct: 275 GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFC 334

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++ MYA  G + +A  +F RM  RD +SW  +++G+ +NGF + AL++   M      
Sbjct: 335 NSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVS 394

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D ITI S L A A +GSL +G  +H  A   GF S V V+ AL++MYAK  R++ A  V
Sbjct: 395 PDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEV 454

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  M  ++VVSW+SMIA +       EA+  F+ ML   V+P +VT + AL ACA  G L
Sbjct: 455 FKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGAL 513

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  +H  + +  +  +  + N+LI +Y KC +   A   F     K +VSWN MI G+
Sbjct: 514 RSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 573

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKN 475
             +G    AL++F +M      PD  T V+++ A +   ++    +  H++  +     N
Sbjct: 574 VAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPN 633

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVT----TWNVMIDGYGTH---GLGKAAVE 528
           +     ++D+ ++ G +  A   ++ +NE  +T     W  +++G   H    LG+ A +
Sbjct: 634 LKHYACMVDLLSRVGQLTEA---YNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAK 690

Query: 529 LFNKMLEGPTKPNDITF---LCAISA 551
              ++     +PND  +   LC + A
Sbjct: 691 YVLEL-----EPNDAGYHVLLCDLYA 711



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 179/354 (50%), Gaps = 1/354 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +  A++ M  + G    A  VF  M  R+V SWN M+  Y + G  EEA+ ++ +M+ 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            GV P   T    L +C  + D   G  VH  + +     +V + N+L++MY+KC  V  
Sbjct: 189 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  +     +SWNAMI G+ +NG  N  L  F  M    ++P+  T+ SV  A   
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS I +AK +H L ++  F  +V    +LI MYA  G +G AR +F  M+ R   +W  M
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G    A+E++  M      P+DIT   A++AC+  G ++ G+     L +  G
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHELAESKG 427

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               +    A++++  ++ R+++A +  + MP +  ++    + G C  H+N E
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFE 481


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/658 (41%), Positives = 420/658 (63%), Gaps = 4/658 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K+IH +L+V G     F +T +++  +  G I  A ++FD +P   +  WN I+ G+++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + AL + + M       D  T   +L A + +  L++G+ VH    R GFD+ V V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 278 TALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
             L+ +YAKC R+ +AR VF+G+    R +VSW ++++AY + G P EA+ IF  M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V+P  V ++  L+A   L DL++G  +H  + ++ L  +  +  SL +MY+KC +V  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F K++   L+ WNAMI GYA+NG   EA++ F +M +K+++PD+ ++ S I A A++ 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  A+ ++  V RS +  +VF+ +ALIDM+AKCG+V  AR +FD   +R V  W+ MI 
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GYG HG  + A+ L+  M  G   PND+TFL  + AC+HSG+V EG  +F +L  D+ I 
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF-NLMADHKIN 456

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P   HY  ++DLLGRAG L++A++ I+ MP++PG+TV+GA+L ACK H++VELGE AA +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           LF +DP   G++V L+N+YAAA +WD++A+VR  M++KGL K  GCS VE++  + +F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HP+ + I   +E +   +K  G+V + + S+HD+ D   E  L SHSE++AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++  G+ + I KNLR C +CH ATK IS +  REI+VRD +RFH FK+GVCSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 268/495 (54%), Gaps = 7/495 (1%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++  T   +L++I   ++  GL       TKL+     +  ++ A +VF+ +P    
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ +++GY++     DA+     M+   V+P  + + +LLK C  +  ++ G+ +H Q
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNTIVAGFAQNGFAE 221
           +   GF  D+F   G++ +YAKC ++  A  +F+   +PER +VSW  IV+ +AQNG   
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL++ + M +   + D++ +VS+L A   +  L+ G+++H   ++ G +   ++  +L 
Sbjct: 205 EALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MYAKCG+V TA+++FD MKS N++ WN+MI+ Y + G   EA+ +F +M+++ V P  +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +I  A+ ACA +G LE+   +++ + +     DV ++++LI M++KC  V+ A  +F + 
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + +V W+AMI+GY  +GR  EA++ +  M    + P+  T + ++ A     ++R   
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           W   L+              +ID+  + G +  A  +   M  +  VT W  ++     H
Sbjct: 445 WFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504

Query: 521 ---GLGK-AAVELFN 531
               LG+ AA +LF+
Sbjct: 505 RHVELGEYAAQQLFS 519


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/757 (36%), Positives = 447/757 (59%), Gaps = 2/757 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
           ++  + + +G          LV+++  +  + DA RVF+    + +A+ ++ ++  Y K 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA+     M +  + P  + ++ ++  C     I  G+++H  ++  G+  D+F  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY K G+++ A  +F++MP+ D+VSWN +++G   NG    A++L+ +M   G  
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +   + SIL A A  G+  +G+ +HG+ ++A  DS   +   LVDMYAK   ++ A  V
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 360

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD M  R+++ WN++I+    GG  +EA  IF  +  +G+     T+   L + A L   
Sbjct: 361 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 420

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                VH L +++    D  + N LI  Y KC  +  A  +F +     +++  +MI   
Sbjct: 421 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 480

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           +Q      A+  F +M  K ++PD F + S++ A A LS     K +HA +I+  F  + 
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F   AL+  YAKCG++  A   F  + ER V +W+ MI G   HG GK A+ELF +M++ 
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN IT    + AC+H+GLV+E   YF S+K+ +GI+   +HY  M+DLLGRAG+L++
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A + +  MP +   +V+GA+LGA ++HK+ ELG+ AA +LF L+P++ G HVLLAN YA+
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           + MW+++AKVR +M+   ++K P  S VE+K++VH+F  G   HP +K IY+ L+ L D 
Sbjct: 721 SGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDL 780

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           +  AGY+P+ +  +HD++   +E LLS HSE+LA+AF LL++ PG+ I ++KNLR+C DC
Sbjct: 781 MSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H A K+IS +  REII+RD++RFH F++G CSCGDYW
Sbjct: 841 HMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 266/583 (45%), Gaps = 12/583 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++KSG       +  L+S + K      A RVF+ IPD     + +++  Y+       A
Sbjct: 30  LLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSA 87

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     MR + V    +    +LK   D    + G ++H   +  GF  D+F    +V M
Sbjct: 88  IQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAM 144

Query: 183 YAKCGQIEEAYKMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           Y   G +++A ++FD    ER+ VSWN +++ + +N     A+ +   M   G +     
Sbjct: 145 YGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG 204

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
              ++ A     ++  G+ VH   +R G++  V  + ALVDMY K GRV+ A ++F+ M 
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VVSWN++I+  V  G+   A+ +  +M   G+ P    +   L ACA  G  + G  
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H  + +    +D  +   L+ MY+K   +D A  +F  +  + L+ WNA+I G +  GR
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 384

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            +EA + F  +R + +  +  T+ +V+ + A L      + +HAL  +  F  +  V+  
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           LID Y KC  +  A  +F+  +   +     MI        G+ A++LF +ML    +P+
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
                  ++AC+     E+G      L K   +        A+V    + G + +A    
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAF 563

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
             +P E G+  + AM+G    H +     K A  LF    DEG
Sbjct: 564 SSLP-ERGVVSWSAMIGGLAQHGH----GKRALELFGRMVDEG 601



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 267/544 (49%), Gaps = 17/544 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  CT  + +   R++  ++++ G          LV ++ K   +  A+ +FE +PD  
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ G         A+  L++M+   + P V+  + +LK C   G    G++IHG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I      D +   G+V+MYAK   +++A K+FD M  RDL+ WN +++G +  G  + 
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  +   + +EG   +  T+ ++L + A++ +    + VH  A + GF    +V   L+D
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  +  A  VF+   S ++++  SMI A  +  + E A+++F +ML +G+EP    
Sbjct: 448 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L+ACA L   E+G  VH  L + +  +D    N+L+  Y+KC  ++ A   FS L 
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK- 461
            + +VSW+AMI G AQ+G    AL  F +M  + I P+  TM SV+ A     ++  AK 
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           + +++      ++     + +ID+  + G +  A  L + M  + + + W  ++     H
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687

Query: 521 G---LGKAAVE-LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI-- 574
               LGK A E LF  +LE P K      L    A   SG+  E +     L KD  I  
Sbjct: 688 KDPELGKLAAEKLF--ILE-PEKSGTHVLLANTYAS--SGMWNE-VAKVRKLMKDSNIKK 741

Query: 575 EPVM 578
           EP M
Sbjct: 742 EPAM 745



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 197/375 (52%), Gaps = 6/375 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  +H  L+ +GF   L     +++ Y+KC +   A ++FD +P+   VSW+++V  ++ 
Sbjct: 23  GAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    A+     M  EG   +   +  +L  V +    ++G  VH  AM  GF S V V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFV 137

Query: 277 STALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + ALV MY   G ++ AR VFD   S RN VSWN +++AYV+     +A+++F +M+  G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++PT       ++AC    +++ G  VH ++ ++    DV   N+L+ MY K  +VD A+
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF K+    +VSWNA+I G   NG  + A+    +M+S  + P+ F + S++ A A   
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                + IH  +I++  + + ++   L+DMYAK   +  A  +FD M+ R +  WN +I 
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 516 GYGTHGLGKAAVELF 530
           G    G    A  +F
Sbjct: 378 GCSHGGRHDEAFSIF 392



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 160/328 (48%), Gaps = 8/328 (2%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI   L   A   +L  G  +H   +++GF  + ++   L+  Y+KC R   AR VFD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEI 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY   G P  A++ F  M  +GV   N   +  +  C  + D + G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGV-CCNEFALPVVLKC--VPDAQLGA 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQN 419
            VH +      G+DV + N+L++MY     +D A  +F +    +  VSWN ++  Y +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            +  +A+  F +M    I+P  F    V+ A      I   + +HA+V+R  +EK+VF  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY K G V  A  +F+ M +  V +WN +I G   +G    A+EL  +M      
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYF 565
           PN       + AC+ +G  + G  IH F
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGF 328



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 12/292 (4%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           TI + L   A    L  G  +H  L  LK G   S+ N LIS YSKC++   A  +F ++
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANL--LKSGFLASLRNHLISFYSKCRRPCCARRVFDEI 63

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
                VSW++++  Y+ NG    A+  F  MR++ +  + F +  V+  + +  +     
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GA 120

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM-NERHVTTWNVMIDGYGTH 520
            +HA+ + + F  +VFV  AL+ MY   G +  AR +FD   +ER+  +WN ++  Y  +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
                A+++F +M+    +P +  F C ++AC+ S  ++ G      + +  G E  +  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVR-MGYEKDVFT 239

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI----HKNVEL 628
             A+VD+  + GR++ A    +KMP +  +  + A++  C +    H+ +EL
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL 290


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/757 (36%), Positives = 447/757 (59%), Gaps = 2/757 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
           ++  + + +G          LV+++  +  + DA RVF+    + +A+ ++ ++  Y K 
Sbjct: 28  QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA+     M +  + P  + ++ ++  C     I  G+++H  ++  G+  D+F  
Sbjct: 88  DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 147

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY K G+++ A  +F++MP+ D+VSWN +++G   NG    A++L+ +M   G  
Sbjct: 148 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 207

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +   + SIL A A  G+  +G+ +HG+ ++A  DS   +   LVDMYAK   ++ A  V
Sbjct: 208 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 267

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD M  R+++ WN++I+    GG  +EA  IF  +  +G+     T+   L + A L   
Sbjct: 268 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 327

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                VH L +++    D  + N LI  Y KC  +  A  +F +     +++  +MI   
Sbjct: 328 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 387

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           +Q      A+  F +M  K ++PD F + S++ A A LS     K +HA +I+  F  + 
Sbjct: 388 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 447

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F   AL+  YAKCG++  A   F  + ER V +W+ MI G   HG GK A+ELF +M++ 
Sbjct: 448 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 507

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN IT    + AC+H+GLV+E   YF S+K+ +GI+   +HY  M+DLLGRAG+L++
Sbjct: 508 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 567

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A + +  MP +   +V+GA+LGA ++HK+ ELG+ AA +LF L+P++ G HVLLAN YA+
Sbjct: 568 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 627

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           + MW+++AKVR +M+   ++K P  S VE+K++VH+F  G   HP +K IY+ L+ L D 
Sbjct: 628 SGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDL 687

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           +  AGY+P+ +  +HD++   +E LLS HSE+LA+AF LL++ PG+ I ++KNLR+C DC
Sbjct: 688 MSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 747

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H A K+IS +  REII+RD++RFH F++G CSCGDYW
Sbjct: 748 HMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 267/544 (49%), Gaps = 17/544 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  CT  + +   R++  ++++ G          LV ++ K   +  A+ +FE +PD  
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ G         A+  L++M+   + P V+  + +LK C   G    G++IHG
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I      D +   G+V+MYAK   +++A K+FD M  RDL+ WN +++G +  G  + 
Sbjct: 235 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 294

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  +   + +EG   +  T+ ++L + A++ +    + VH  A + GF    +V   L+D
Sbjct: 295 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  +  A  VF+   S ++++  SMI A  +  + E A+++F +ML +G+EP    
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L+ACA L   E+G  VH  L + +  +D    N+L+  Y+KC  ++ A   FS L 
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 474

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK- 461
            + +VSW+AMI G AQ+G    AL  F +M  + I P+  TM SV+ A     ++  AK 
Sbjct: 475 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 534

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           + +++      ++     + +ID+  + G +  A  L + M  + + + W  ++     H
Sbjct: 535 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594

Query: 521 G---LGKAAVE-LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI-- 574
               LGK A E LF  +LE P K      L    A   SG+  E +     L KD  I  
Sbjct: 595 KDPELGKLAAEKLF--ILE-PEKSGTHVLLANTYAS--SGMWNE-VAKVRKLMKDSNIKK 648

Query: 575 EPVM 578
           EP M
Sbjct: 649 EPAM 652



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 239/517 (46%), Gaps = 10/517 (1%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           MR + V    +    +LK   D    + G ++H   +  GF  D+F    +V MY   G 
Sbjct: 1   MRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 189 IEEAYKMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
           +++A ++FD    ER+ VSWN +++ + +N     A+ +   M   G +        ++ 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           A     ++  G+ VH   +R G++  V  + ALVDMY K GRV+ A ++F+ M   +VVS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN++I+  V  G+   A+ +  +M   G+ P    +   L ACA  G  + G  +H  + 
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +    +D  +   L+ MY+K   +D A  +F  +  + L+ WNA+I G +  GR +EA +
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F  +R + +  +  T+ +V+ + A L      + +HAL  +  F  +  V+  LID Y 
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYW 357

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KC  +  A  +F+  +   +     MI        G+ A++LF +ML    +P+      
Sbjct: 358 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 417

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            ++AC+     E+G      L K   +        A+V    + G + +A      +P E
Sbjct: 418 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-E 475

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
            G+  + AM+G    H +     K A  LF    DEG
Sbjct: 476 RGVVSWSAMIGGLAQHGH----GKRALELFGRMVDEG 508


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 288/771 (37%), Positives = 452/771 (58%), Gaps = 31/771 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C+ +K+LR   ++  +++ SG          LV ++ K +   D+ R+F+ IP++ 
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ +   Y +     +AV     M    + P  ++ + ++  C  + +  RGK IHG
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            LI  G+  D F+   +V+MYAK G + +A  +F+++ + D+VSWN ++AG   +   E 
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL+L+ +M  +                           +H   M+   +S + VS  LVD
Sbjct: 343 ALELLGQMKRQ---------------------------LHSSLMKMDMESDLFVSVGLVD 375

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KC  +E AR+ F+ +  +++++WN++I+ Y +     EA+ +F +M  +G+     T
Sbjct: 376 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 435

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L + A L  +     VH L  +    +D+ + NSLI  Y KC  V+ A  IF +  
Sbjct: 436 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 495

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
              LVS+ +MI  YAQ G+  EAL  F +M+   +KPD F   S++ A A LS     K 
Sbjct: 496 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  +++  F  ++F   +L++MYAKCG++  A   F  + ER + +W+ MI G   HG 
Sbjct: 556 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 615

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A++LFN+ML+    PN IT +  + AC+H+GLV E   YF S+++ +G +P+ +HY 
Sbjct: 616 GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYA 675

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DLLGRAG++NEA + + KMP E   +V+GA+LGA +IHK+VELG +AA  LF L+P+
Sbjct: 676 CMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 735

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G HVLLANIYA+A  W+ +A+VR +M    ++K PG S +E+K++V++F  G   H +
Sbjct: 736 KSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYR 795

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S+ IY  L+ L D +  AGYVP     +HDVE   +E LL  HSEKLA+AFGL+ +  G+
Sbjct: 796 SQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGA 855

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I ++KNLRVC DCH A KYI  +  REIIVRD++RFH FK+G CSCGDYW
Sbjct: 856 PIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 279/618 (45%), Gaps = 75/618 (12%)

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+P P         +++   +F+      + L  +   +  P   +Y+ LL  C     +
Sbjct: 21  FKPAP--------KLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSL 72

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R G +IH  +  +G S D      ++N+Y+KC     A K+ D   E DLVSW+ +++G+
Sbjct: 73  RPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGY 132

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           AQNG    AL     MH  G + +  T  S+L A + V  LRIGK VHG  + +GF+  V
Sbjct: 133 AQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV 192

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V+  LV MYAKC     ++ +FD +  RNVVSWN++ + YV+     EA+ +F +M+  
Sbjct: 193 FVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLS 252

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G++P   ++   ++AC  L D  RG  +H  L +L    D    N+L+ MY+K   +  A
Sbjct: 253 GIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F K++   +VSWNA+I G   +    +AL    +M+ +                   
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ------------------- 353

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
                   +H+ +++   E ++FV   L+DMY+KC  +  AR  F+++ E+ +  WN +I
Sbjct: 354 --------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAII 405

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITF---------LCAISACS--HSGLVEEGIH 563
            GY  +     A+ LF +M +     N  T          L  +  C   H   V+ G H
Sbjct: 406 SGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH 465

Query: 564 ----YFTSLKKDYG-------IEPVMDH--------YGAMVDLLGRAGRLNEAWDF---I 601
                  SL   YG        E + +         + +M+    + G+  EA      +
Sbjct: 466 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM 525

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL----FELDPDEGGYHVLLANIYAAA 657
           Q M ++P   V  ++L AC      E G++    +    F LD   G     L N+YA  
Sbjct: 526 QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS---LVNMYAKC 582

Query: 658 SMWDKLAKVRTIMEKKGL 675
              D   +  + + ++G+
Sbjct: 583 GSIDDAGRAFSELTERGI 600


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 282/786 (35%), Positives = 461/786 (58%), Gaps = 9/786 (1%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           +P   +  P  ++L+    ++   ++  L + + L         LV+++  +  + +A R
Sbjct: 99  VPCNEFALP--VVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARR 156

Query: 94  VFEP---IPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           +F+    +  + +A+ ++TM+  Y K     DA+     M +    P  + ++ ++  C 
Sbjct: 157 MFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACT 216

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
              ++  G+++HG ++  G+  D+F    +V+MY+K G IE A  +F++MP  D+VSWN 
Sbjct: 217 GSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNA 276

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
            ++G   +G    AL+L+ +M   G   +  T+ S+L A A  G+  +G+ +HG+ ++A 
Sbjct: 277 FISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV 336

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            D    V+  LVDMYAK G ++ AR VFD M  R+++ WN++I+     G   E + +F 
Sbjct: 337 ADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFH 396

Query: 330 KMLDQGVE--PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           +M  +G++      T+   L + A    +     VH L +++ L +D  + N LI  Y K
Sbjct: 397 RMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWK 456

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C ++D A  +F + +   ++S   M+   +Q     +A+  F +M  K ++PDSF + S+
Sbjct: 457 CGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSL 516

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + A   LS     K +HA +I+  F  +VF   AL+  YAKCG++  A   F  + ER +
Sbjct: 517 LNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGI 576

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +W+ MI G   HG GK A++LF++ML+    PN IT    +SAC+H+GLV++   YF S
Sbjct: 577 VSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFES 636

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           +K+ +GI+   +HY  M+D+LGRAG+L +A + +  MP +    V+GA+LGA ++H++ E
Sbjct: 637 MKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPE 696

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG  AA +LF L+P++ G HVLLAN YA+A MWD++AKVR +M+   ++K P  S VE+K
Sbjct: 697 LGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIK 756

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSE 746
           ++VH+F  G   HP ++ IY  L  L D +  AGYVP+    +HDV+   +E LLS HSE
Sbjct: 757 DKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSE 816

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           +LA+AF L+++  G+ I ++KNLR+C DCH A KYIS +  REII+RD++RFH F NG C
Sbjct: 817 RLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTC 876

Query: 807 SCGDYW 812
           SCGDYW
Sbjct: 877 SCGDYW 882



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 174/628 (27%), Positives = 290/628 (46%), Gaps = 23/628 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++KSGL     F   L++L+ +    S A  VF+ IPD     + +++  Y+      DA
Sbjct: 30  LLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDA 87

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     MR   V    +    +LK   DV   R G ++H   +      D+F    +V +
Sbjct: 88  LLAFRAMRGRGVPCNEFALPVVLKCAPDV---RFGAQVHALAVATRLVHDVFVANALVAV 144

Query: 183 YAKCGQIEEAYKMFDRM----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           Y   G ++EA +MFD       ER+ VSWNT+++ + +N  +  A+ +   M   G R +
Sbjct: 145 YGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPN 204

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
                 ++ A      L  G+ VHG  +R G++  V  + ALVDMY+K G +E A  VF+
Sbjct: 205 EFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFE 264

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M + +VVSWN+ I+  V  G+   A+ +  +M   G+ P   T+   L ACA  G    
Sbjct: 265 KMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNL 324

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H  + +     D  +   L+ MY+K   +D A  +F  +  + L+ WNA+I G + 
Sbjct: 325 GRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSH 384

Query: 419 NGRVNEALNYFCKMRSKNIKPD--SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           +GR  E L+ F +MR + +  D    T+ SV+ + A    I + + +HAL  +     + 
Sbjct: 385 DGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDS 444

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V+  LID Y KCG +  A  +F       + +   M+        G+ A++LF +ML  
Sbjct: 445 HVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRK 504

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             +P+       ++AC+     E+G      L K      V     A+V    + G + +
Sbjct: 505 GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG-NALVYAYAKCGSIED 563

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG--GYHVLLANIY 654
           A      +P E GI  + AM+G    H +   G++A + LF    DEG    H+ L ++ 
Sbjct: 564 ADMAFSGLP-ERGIVSWSAMIGGLAQHGH---GKRALD-LFHRMLDEGVAPNHITLTSVL 618

Query: 655 AA---ASMWDKLAK-VRTIMEKKGLQKT 678
           +A   A + D   K   ++ E  G+ +T
Sbjct: 619 SACNHAGLVDDAKKYFESMKETFGIDRT 646



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 190/381 (49%), Gaps = 9/381 (2%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  +H  L+ +G  L  F+   ++ +Y++C     A  +FD +P+   VSW+++V  ++ 
Sbjct: 23  GAHLHSHLLKSGL-LAGFS-NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    AL     M   G   +   +  +L    +V   R G  VH  A+       V V
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV---RFGAQVHALAVATRLVHDVFV 137

Query: 277 STALVDMYAKCGRVETARLVFDGM----KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           + ALV +Y   G V+ AR +FD        RN VSWN+MI+AYV+     +A+ +F++M+
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             G  P        ++AC    DLE G  VH  + +     DV   N+L+ MYSK   ++
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIE 257

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            AA +F K+    +VSWNA I G   +G  + AL    +M+S  + P+ FT+ SV+ A A
Sbjct: 258 MAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACA 317

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
                   + IH  ++++  + + FV   L+DMYAK G +  AR +FD M  R +  WN 
Sbjct: 318 GAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNA 377

Query: 513 MIDGYGTHGLGKAAVELFNKM 533
           +I G    G     + LF++M
Sbjct: 378 LISGCSHDGRHGEVLSLFHRM 398



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 185/389 (47%), Gaps = 21/389 (5%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI S L       SL  G  +H + +++G   +   S  L+ +Y++C     AR VFD +
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGL--LAGFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY   G P +A+  F+ M  +GV P N   +  +  CA   D+  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV-PCNEFALPVVLKCAP--DVRFGA 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGY 416
            VH L    +L  DV + N+L+++Y     VD A  +F +  G    +  VSWN MI  Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            +N +  +A+  F +M     +P+ F    V+ A      +   + +H  V+R+ +EK+V
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F   AL+DMY+K G +  A  +F+ M    V +WN  I G  THG    A+EL  +M   
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300

Query: 537 PTKPNDITFLCAISACSHSGLVEEG--IHYF-TSLKKDYGIEPVMDHYGA--MVDLLGRA 591
              PN  T    + AC+ +G    G  IH F      D+      D + A  +VD+  + 
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADF------DEFVAVGLVDMYAKH 354

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G L++A      MP    + ++ A++  C
Sbjct: 355 GFLDDARKVFDFMP-RRDLILWNALISGC 382



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 11/289 (3%)

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
           T  TI  AL        L  G  +H  L  LK G     +N L+++YS+C+    A  +F
Sbjct: 3   TPETIGSALARFGTSRSLFAGAHLHSHL--LKSGLLAGFSNHLLTLYSRCRLPSAARAVF 60

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++     VSW++++  Y+ NG   +AL  F  MR + +  + F +  V+    +   +R
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VR 117

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD----MMNERHVTTWNVMI 514
           +   +HAL + +    +VFV  AL+ +Y   G V  AR +FD    +  ER+  +WN MI
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
             Y  +     A+ +F +M+    +PN+  F C ++AC+ S  +E G     ++ +  G 
Sbjct: 178 SAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT-GY 236

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           E  +    A+VD+  + G +  A    +KMP    +  + A +  C  H
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTH 284


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/735 (37%), Positives = 443/735 (60%), Gaps = 5/735 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY-DDVAP 136
            +++F ++ +L DA  VF  + ++    ++ ++ GYAK    D+A+    RM +   V P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            VY +  +L+ CG + ++ RG+E+H  ++  G+ LD+  +  ++ MY KCG ++ A  +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           DRMP RD++SWN +++G+ +NG     L L   M       D +T+ S++ A   +G  R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           +G+ +H Y +  GF   ++V  +L  MY   G    A  +F  M  +++VSW +MI+ Y 
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
               PE+A+  ++ M    V+P  +T+   L ACA LGDL+ G+ +HKL  + +L + V 
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+LI+MYSKCK +D+A DIF  +  K ++SW ++I G   N R  EAL +F +M+   
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK-MT 493

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P++ T+ + + A A +  +   K IHA V+R+    + F+  AL+DMY +CG +  A 
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAW 553

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             F+   ++ V++WN+++ GY   G G   VELF++M++   +P++ITF+  +  C  S 
Sbjct: 554 NQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQ 612

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           +V +G+ YF+ + ++YG+ P + HY  +VDLLGRAG L EA  FIQKMP+ P   V+GA+
Sbjct: 613 MVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L AC+IH N++LGE +A R+FELD    GY++LL N+YA    W ++AKVR +M++ GL 
Sbjct: 672 LNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDY 735
              GCS VE+K +VH+F S    HPQ+K I T L+   +++   G    + S   D  + 
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEI 791

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            ++ +   HSE+ AIAFGL+NS PG  I + KNL +C  CH+  K+IS    REI VRD 
Sbjct: 792 SRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDS 851

Query: 796 HRFHCFKNGVCSCGD 810
             FH FK+G CSCGD
Sbjct: 852 EHFHHFKDGECSCGD 866



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 253/493 (51%), Gaps = 7/493 (1%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L G      L++A+  L  M+   VA     +  L+++C        G +++   + +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           SL +      + M+ + G + +A+ +F +M ER+L SWN +V G+A+ G+ + A+ L  R
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 230 M-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M    G + D  T   +L     +  L  G+ VH + +R G++  ++V  AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            V++ARL+FD M  R+++SWN+MI+ Y E G   E +++F  M    V+P  +T+   + 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           AC  LGD   G  +H  +       D+S+ NSL  MY        A  +FS++  K +VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W  MI GY  N    +A++ +  M   ++KPD  T+ +V+ A A L  +     +H L I
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           ++     V V   LI+MY+KC  +  A  +F  +  ++V +W  +I G   +     A+ 
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVD 586
            F +M +   +PN IT   A++AC+  G +  G  IH    L+   G++  + +  A++D
Sbjct: 486 FFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGVGLDDFLPN--ALLD 541

Query: 587 LLGRAGRLNEAWD 599
           +  R GR+N AW+
Sbjct: 542 MYVRCGRMNIAWN 554



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 2/345 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R I   +I +G          L  ++    S  +A ++F  +  K    + TM+ GY   
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYN 376

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              + A+     M  D V P       +L  C  +G++  G E+H   I       +   
Sbjct: 377 FLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++NMY+KC  I++A  +F  +P ++++SW +I+AG   N     AL +  R  +   +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFFRQMKMTLQ 495

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + IT+ + L A A +G+L  GK +H + +R G      +  AL+DMY +CGR+  A   
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQ 555

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+  K ++V SWN ++  Y E G     + +F +M+   V P  +T +  L  C     +
Sbjct: 556 FNSQK-KDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMV 614

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +G+     +++  +  ++     ++ +  +  ++  A     K+
Sbjct: 615 RQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/714 (39%), Positives = 433/714 (60%), Gaps = 7/714 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +  ++  YA      +A+S    M      P  Y +T + + C +   I  GK I G L+
Sbjct: 10  WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69

Query: 166 VNG-FSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
             G F  D+     +++M+ K  G +E AYK+FDRMP+R++V+W  ++  F Q GF+  A
Sbjct: 70  KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +DL   M   G   D  T+  ++ A A +G L +G+  H   M++G D  V V  +LVDM
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDM 189

Query: 284 YAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPT 339
           YAKC   G V+ AR VFD M   NV+SW ++I  YV+ GG   EA+ +F +M+   V+P 
Sbjct: 190 YAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPN 249

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           + T    L ACA+L D+  G  V+ L+ +++L +   + NSLISMYS+C  ++ A   F 
Sbjct: 250 HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFD 309

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L  K LVS+N ++  YA++    EA   F ++       ++FT  S++   + +  I  
Sbjct: 310 VLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGK 369

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + IH+ +++S F+ N+ +  ALI MY++CG +  A  +F+ M + +V +W  MI G+  
Sbjct: 370 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 429

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG    A+E F+KMLE    PN++T++  +SACSH GL+ EG+ +F S+K ++GI P M+
Sbjct: 430 HGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRME 489

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  +VDLLGR+G L EA + +  MP +    V    LGAC++H N++LG+ AA  + E 
Sbjct: 490 HYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQ 549

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP +   ++LL+N++A+A  W+++A++R  M+++ L K  GCS +E++N+VH FY G T 
Sbjct: 550 DPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTS 609

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQ++ IY  L+ L  +IK  GY+P T+ + HDVE+  +E  L  HSEK+A+A+G +++S
Sbjct: 610 HPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTS 669

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
               I + KNLRVCGDCH A KY S+V  +EI++RD +RFH FK+G CSC DYW
Sbjct: 670 TSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 218/405 (53%), Gaps = 6/405 (1%)

Query: 59  ILPLIIKSGLCDQHL-FQTKLVSLFCKYNS-LSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           I   ++K+G  +  +     L+ +F K N  L  A +VF+ +PD+    +  M+  + + 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DAV   + M      P  +  + ++  C ++G +  G++ H  ++ +G  LD+   
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 177 TGVVNMYAKC---GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL-ALDLVTRMHE 232
             +V+MYAKC   G +++A K+FDRMP  +++SW  I+ G+ Q+G  +  A++L   M +
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
              + +  T  S+L A AN+  + +G+ V+   ++    SI  V  +L+ MY++CG +E 
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR  FD +  +N+VS+N+++ AY +  N EEA  +F ++   G      T    L   + 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           +G + +G  +H  + +    +++ + N+LISMYS+C  ++ A  +F+++    ++SW +M
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           I G+A++G    AL  F KM    + P+  T ++V+ A + + +I
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLI 468



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 216/410 (52%), Gaps = 7/410 (1%)

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +RDLVSW+ +++ +A N  A  A+     M E G   +      +  A +N  ++ +GK 
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 261 VHGYAMRAG-FDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + G+ ++ G F+S V V  AL+DM+ K  G +E+A  VFD M  RNVV+W  MI  + + 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G   +A+ +F  M+  G  P   T+   + ACA++G L  G   H L+ +  L  DV + 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 379 NSLISMYSKC---KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN-EALNYFCKMRS 434
            SL+ MY+KC     VD A  +F ++    ++SW A+I GY Q+G  + EA+  F +M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             +KP+ FT  SV+ A A LS I   + ++ALV++        V  +LI MY++CG +  
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR  FD++ E+++ ++N +++ Y      + A ELFN++    T  N  TF   +S  S 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
            G + +G    + + K  G +  +    A++ +  R G +  A+    +M
Sbjct: 364 IGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEM 412



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 160/312 (51%), Gaps = 6/312 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C +L ++    ++  L++K  L   +     L+S++ +  ++ +A + F+ + +K 
Sbjct: 256 VLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKN 315

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              Y+T++  YAK  + ++A      +         + +  LL     +G I +G++IH 
Sbjct: 316 LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHS 375

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++ +GF  +L     +++MY++CG IE A+++F+ M + +++SW +++ GFA++GFA  
Sbjct: 376 RILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATR 435

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
           AL+   +M E G   + +T +++L A ++VG +  G K      +  G    +     +V
Sbjct: 436 ALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVV 495

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV-EPT 339
           D+  + G +E A  + + M  + + +   + + A    GN +      + +L+Q   +P 
Sbjct: 496 DLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPA 555

Query: 340 NVTIMEALHACA 351
              ++  LHA A
Sbjct: 556 AYILLSNLHASA 567



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 1/106 (0%)

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           M N+R + +W+ +I  Y  +     A+  F  MLE    PN+  F     ACS+   +  
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA-GRLNEAWDFIQKMP 605
           G   F  L K    E  +    A++D+  +  G L  A+    +MP
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/772 (37%), Positives = 444/772 (57%), Gaps = 76/772 (9%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C  LK     +++  +I  + +        KLVS +     L +  RVF+ +  K 
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ M+  YAK     +++                             +I   K I G
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLF--------------------------KIMVEKGIEG 198

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +                        + E A+++FD++ +RD++SWN++++G+  NG  E 
Sbjct: 199 K------------------------RPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +  +M   G   D  TI+S+L   AN G+L +GKAVH  A+++ F+  +N S  L+D
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KCG ++ A  VF+ M  RNVVSW SMIA Y   G  + A+++ Q+M  +GV+   V 
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           I   LHACA  G L+ G  VH  +    + +++ + N+L+ MY+KC  ++ A  +FS + 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SWN MI                       +KPDS TM  V+PA A LS +   K 
Sbjct: 415 VKDIISWNTMI---------------------GELKPDSRTMACVLPACASLSALERGKE 453

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  ++R+ +  +  V  AL+D+Y KCG +G AR LFDM+  + + +W VMI GYG HG 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A+  FN+M +   +P++++F+  + ACSHSGL+E+G  +F  +K D+ IEP ++HY 
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLL R G L++A++FI+ +PI P  T++GA+L  C+ + ++EL EK A R+FEL+P+
Sbjct: 574 CMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPE 633

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG-STKHP 701
             GY+VLLANIYA A  W+++ ++R  + K+GL+K PGCS +E+K +V+ F SG ++ HP
Sbjct: 634 NSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            SK I + L+ +  ++K  G+ P T  ++ + ++  +E  L  HSEKLA+AFGLL   P 
Sbjct: 694 HSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPR 753

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI + KNLRVCGDCH   K++S  T REI++RD +RFH FK+G CSC  +W
Sbjct: 754 KTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 7/195 (3%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C SL  L R   I   I+++G          LV L+ K   L  A  +F+ IP 
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  M+ GY      ++A++    MR   + P   ++  +L  C   G + +G   
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 161 HGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
              ++ N F+++  L     +V++ ++ G + +AY+  + +P   D   W  ++ G    
Sbjct: 556 F-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNY 614

Query: 218 GFAELALDLVTRMHE 232
              ELA  +  R+ E
Sbjct: 615 HDIELAEKVAERVFE 629


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 297/783 (37%), Positives = 456/783 (58%), Gaps = 25/783 (3%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           LLL  CT  +        I+ SG    H     L++++ K  SLS A +VF+  P++   
Sbjct: 93  LLLGKCTHAR--------IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLV 144

Query: 105 LYHTMLKGYAKFASLD-------DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
            ++ +L  YA  AS+D       + +     +R    +        +LK+C + G +   
Sbjct: 145 TWNAILGAYA--ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +HG  I  G   D+F    +VN+Y+KCG++ +A  +FD M ERD+V WN ++ G+ Q 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAV--ANVGSLRIGKAVHGYAMRAGFDSIVN 275
           G  + A  L +  H  G R D  ++  IL     A    L +GK VHG A+++G DS V+
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V+ +LV+MY+K G    AR VF+ MK  +++SWNSMI++  +    EE++ +F  +L +G
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 336 VEP-----TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ++P      ++T+  A  AC  L  L++G  +H    +    +D+ + + ++ MY KC  
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A  +F+ +     V+W +MI G   NG  ++AL  + +MR   + PD +T  ++I A
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 502

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            + ++ +   + +HA VI+     + FV T+L+DMYAKCG +  A  LF  MN R++  W
Sbjct: 503 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 562

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N M+ G   HG  + AV LF  M     +P+ ++F+  +SACSH+GL  E   Y  S+  
Sbjct: 563 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 622

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           DYGIEP ++HY  +VD LGRAG + EA   I+ MP +   ++  A+LGAC+I  +VE G+
Sbjct: 623 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGK 682

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
           + A RLF L+P +   +VLL+NIYAAA+ WD +   R +M++K ++K PG S +++KN +
Sbjct: 683 RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNML 742

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H F      HPQ+  IY  +E ++  I+  GYVPDT  +  DVED  +E  L  HSEKLA
Sbjct: 743 HLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLA 802

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           IA+GL+++   +TI + KNLRVCGDCHNA KYIS V  REI++RD +RFH F++GVCSCG
Sbjct: 803 IAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCG 862

Query: 810 DYW 812
           DYW
Sbjct: 863 DYW 865


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/771 (36%), Positives = 448/771 (58%), Gaps = 4/771 (0%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT     ++ R +   + K G C + +    L++L+ ++ SLS A RVF  +P   
Sbjct: 149 VLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCD 208

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++  +A+  + + A+     MR     P       LL  C  +G++ +GK++H 
Sbjct: 209 RVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHS 268

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L+  G S D      ++++Y KCG I EA ++F      ++V WN ++  + Q      
Sbjct: 269 YLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK 328

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           + DL  +M   G R +  T   +L      G + +G+ +H  +++ GF+S + VS  L+D
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLID 388

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+K G ++ AR + + +++++VVSW SMIA YV+    +EA+  F+ M   G+ P N+ 
Sbjct: 389 MYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  A+ ACA +  + +G  +H  +       DVS+ N+L+++Y++C +   A  +F  ++
Sbjct: 449 LASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  ++WN M+ G+AQ+G   EAL  F KM    +K + FT VS I A A L+ I+  K 
Sbjct: 509 HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQ 568

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA VI++       V  ALI +Y KCG++  A+  F  M+ER+  +WN +I     HG 
Sbjct: 569 IHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGW 628

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++LF++M +   KPND+TF+  ++ACSH GLVEEG+ YF S+  ++GI P  DHY 
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYA 688

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L+ A  F+++MP+     V+  +L AC++HKN+E+GE AA  L EL+P 
Sbjct: 689 CVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPH 748

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N YA    W     VR +M+ +G++K PG S +E+KN VH+F+ G   HP 
Sbjct: 749 DSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           + +IY +L  L D +   GY+     + H+ E   ++     HSEKLA+AFGL++  P  
Sbjct: 809 AHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSM 868

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLRVC DCH   K+ S V GREI++RD++RFH F NG CSCGD+W
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 165/543 (30%), Positives = 276/543 (50%), Gaps = 5/543 (0%)

Query: 59  ILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           ++P+I    I  GL +  +    L+ L+ K   +  A RVFE +  + +  +  ML GYA
Sbjct: 60  LVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYA 119

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +    ++AV    +M    V P  Y  + +L  C       +G+ +H Q+   G   +  
Sbjct: 120 RNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               ++ +Y + G +  A ++F  MP  D V++NT+++  AQ G  E AL++   M   G
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              D +TI S+L A A++G L  GK +H Y ++AG      +  +L+D+Y KCG +  A 
Sbjct: 240 WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL 299

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            +F      NVV WN M+ AY +  +  ++  +F +M+  GV P   T    L  C   G
Sbjct: 300 EIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
           ++  G  +H L  +    +D+ ++  LI MYSK   +D+A  I   L+ K +VSW +MI 
Sbjct: 360 EINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           GY Q+    EAL  F  M+   I PD+  + S I A A +  +R  + IH+ V  S +  
Sbjct: 420 GYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSA 479

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           +V +  AL+++YA+CG    A +LF+ +  +   TWN M+ G+   GL + A+E+F KM 
Sbjct: 480 DVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMY 539

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +   K N  TF+ +ISA ++   +++G     ++ K  G     +   A++ L G+ G +
Sbjct: 540 QAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSI 598

Query: 595 NEA 597
            +A
Sbjct: 599 EDA 601


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/720 (37%), Positives = 437/720 (60%), Gaps = 2/720 (0%)

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+ +  +    ++ ++   AK      ++    +M    V    Y ++ + K    +  +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G+++HG ++ +GF         +V  Y K  +++ A K+FD M ERD++SWN+I+ G+
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
             NG AE  L +  +M   G   D  TIVS+    A+   + +G+AVH   ++A F    
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
                L+DMY+KCG +++A+ VF  M  R+VVS+ SMIA Y   G   EA+++F++M ++
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G+ P   T+   L+ CA    L+ G  VH+ + +  LG D+ ++N+L+ MY+KC  +  A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF-CKMRSKNIKPDSFTMVSVIPALAE 453
             +FS+++ K ++SWN +I GY++N   NEAL+ F   +  K   PD  T+  V+PA A 
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS     + IH  ++R+ +  +  V  +L+DMYAKCGA+  A  LFD +  + + +W VM
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GYG HG GK A+ LFN+M +   + ++I+F+  + ACSHSGLV+EG  +F  ++ +  
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           IEP ++HY  +VD+L R G L +A+ FI+ MPI P  T++GA+L  C+IH +V+L EK A
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++FEL+P+  GY+VL+ANIYA A  W+++ ++R  + ++GL+K PGCS +E+K  V+ F
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAF 752
            +G + +P+++ I  FL  +   +   GY P T  ++ D E+  +E  L  HSEKLA+A 
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 660

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+++S  G  I + KNLRVCGDCH   K++S +T REI++RD +RFH FK+G CSC  +W
Sbjct: 661 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 238/479 (49%), Gaps = 7/479 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            I+KSG  +++     LV+ + K   +  A +VF+ + ++    +++++ GY      + 
Sbjct: 69  FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 128

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
            +S  ++M    +   +     +   C D   I  G+ +H   +   FS +      +++
Sbjct: 129 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 188

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY+KCG ++ A  +F  M +R +VS+ +++AG+A+ G A  A+ L   M EEG   D  T
Sbjct: 189 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 248

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           + ++L   A    L  GK VH +      GFD  + VS AL+DMYAKCG ++ A LVF  
Sbjct: 249 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFSE 306

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLER 358
           M+ ++++SWN++I  Y +     EA+ +F  +L++    P   T+   L ACA L   ++
Sbjct: 307 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 366

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H  + +    +D  + NSL+ MY+KC  +  A  +F  +  K LVSW  MI GY  
Sbjct: 367 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 426

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVF 477
           +G   EA+  F +MR   I+ D  + VS++ A +   ++        ++   C  E  V 
Sbjct: 427 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 486

Query: 478 VMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
               ++DM A+ G +  A R + +M      T W  ++ G   H   K A ++  K+ E
Sbjct: 487 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 190/362 (52%), Gaps = 3/362 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +  + +K+    +  F   L+ ++ K   L  A  VF  + D+    Y +M+ GYA+ 
Sbjct: 165 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 224

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               +AV     M  + ++P VY  T +L  C     +  GK +H  +  N    D+F  
Sbjct: 225 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 284

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR- 235
             +++MYAKCG ++EA  +F  M  +D++SWNTI+ G+++N +A  AL L   + EE R 
Sbjct: 285 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 344

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             D  T+  +LPA A++ +   G+ +HGY MR G+ S  +V+ +LVDMYAKCG +  A +
Sbjct: 345 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 404

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           +FD + S+++VSW  MIA Y   G  +EA+ +F +M   G+E   ++ +  L+AC+  G 
Sbjct: 405 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 464

Query: 356 LERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
           ++ G  F + +  + K+   V     ++ M ++   + +A      +        W A++
Sbjct: 465 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524

Query: 414 LG 415
            G
Sbjct: 525 CG 526


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/790 (36%), Positives = 452/790 (57%), Gaps = 80/790 (10%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           + Q++ + ++ Y      +L++C  LK     +++  +I  + +        KLVS +  
Sbjct: 91  MCQKSELETKTY----GSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYAT 146

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              L +  RVF+ +  K   L++ M+  YAK     +++                     
Sbjct: 147 CGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF------------------ 188

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
                   +I   K I G+                        + E A+++FD++ +RD+
Sbjct: 189 --------KIMVEKGIEGK------------------------RPESAFELFDKLCDRDV 216

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           +SWN++++G+  NG  E  L +  +M   G   D  TI+S+L   AN G+L +GKAVH  
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+++ F+  +N S  L+DMY+KCG ++ A  VF+ M  RNVVSW SMIA Y   G  + A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +++ Q+M  +GV+   V I   LHACA  G L+ G  VH  +    + +++ + N+L+ M
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDM 396

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC  ++ A  +FS +  K ++SWN MI                       +KPDS TM
Sbjct: 397 YAKCGSMEAANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTM 435

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
             V+PA A LS +   K IH  ++R+ +  +  V  AL+D+Y KCG +G AR LFDM+  
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + + +W VMI GYG HG G  A+  FN+M +   +P++++F+  + ACSHSGL+E+G  +
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +K D+ IEP ++HY  MVDLL R G L++A++F++ +PI P  T++GA+L  C+ + 
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYH 615

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           ++EL EK A R+FEL+P+  GY+VLLANIYA A  W+++ ++R  + K+GL+K PGCS +
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675

Query: 685 ELKNEVHSFYSG-STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLS 742
           E+K +V+ F SG ++ HP SK I + L+ +  ++K  G+ P T  ++ + ++  +E  L 
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALC 735

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLA+AFGLL   P  TI + KNLRVCGDCH   K++S  T REI++RD +RFH FK
Sbjct: 736 GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795

Query: 803 NGVCSCGDYW 812
           +G CSC  +W
Sbjct: 796 DGYCSCRGFW 805


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 304/821 (37%), Positives = 460/821 (56%), Gaps = 26/821 (3%)

Query: 14  NSTPTQTLHEHKHTLSQRA-----------YIPSRIYRHPS-----ALLLEVCTSLKEL- 56
           + TP Q L  + H L + +           ++  R    P+     + +L+VC  L +  
Sbjct: 50  DETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRI 109

Query: 57  --RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
             +++    IK G  +     T LV ++ K  S+ D  RVF+ +  K    + ++L GY 
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYR 169

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +    + A+    +M+ + + P  + +  +L      G + +G ++H  +I +G    +F
Sbjct: 170 QNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               +VNMY+K   + +A  +FD M  R+ VSWN+++AGF  NG    A +L  RM  EG
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEG 289

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            +       +++   AN+  +   K +H   ++ G D  +N+ TAL+  Y+KC  ++ A 
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349

Query: 295 LVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
            +F  M   +NVVSW ++I+ YV+ G  + AM +F +M  +GV P + T    L A A +
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV 409

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              +    +H L+ +       S+  +L   YSK    + AA IF  +  K +V+W+AM+
Sbjct: 410 SPSQ----IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCF 472
            GYAQ G +  A+  F ++  + ++P+ FT  SV+ A A  +  +   K  H+  I+S F
Sbjct: 466 SGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF 525

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
              + V +AL+ MYAK G + +A  +F    +R + +WN MI GY  HG GK ++++F +
Sbjct: 526 SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEE 585

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M     + + ITF+  ISAC+H+GLV EG  YF  + KDY I P M+HY  MVDL  RAG
Sbjct: 586 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAG 645

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
            L +A D I KMP   G T++  +L AC++H NV+LGE AA +L  L P +   +VLL+N
Sbjct: 646 MLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSN 705

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           IYA A  W + AKVR +M+ K ++K  G S +E+KN+  SF +G   HPQS RIY  LE 
Sbjct: 706 IYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEE 765

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L   +K AGY PDT  + HDVE+  +E +LS HSE+LAIAFGL+ + PG+ I I KNLRV
Sbjct: 766 LSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRV 825

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCH   K IS + GR+I+VRD +RFH FK G CSCGDYW
Sbjct: 826 CGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 167/556 (30%), Positives = 309/556 (55%), Gaps = 12/556 (2%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           + ++F+  P +  +  + +L  +++     +A++  + +R         + + +LKVCG 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   GK++H Q I  GF  D+   T +V+MY K   +E+  ++FD M  +++VSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +AG+ QNG  E AL L ++M  EG + +  T  ++L  +A  G++  G  VH   +++G 
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DS + V  ++V+MY+K   V  A+ VFD M++RN VSWNSMIA +V  G   EA  +F +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M  +GV+ T       +  CA++ ++     +H  + +     D+++  +L+  YSKC +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 391 VDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +D A  +F  + G + +VSW A+I GY QNGR + A+N FC+MR + ++P+ FT  +++ 
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A +S       IHALV+++ +E +  V TAL D Y+K G    A  +F++++E+ +  
Sbjct: 405 ANAAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-SGLVEEGIHYFTSL 568
           W+ M+ GY   G  + AV++F ++ +   +PN+ TF   ++AC+  +  VE+G   F S 
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG-KQFHSC 519

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----K 624
               G    +    A+V +  + G + E+ + + K  ++  +  + +M+     H    K
Sbjct: 520 SIKSGFSNALCVSSALVTMYAKRGNI-ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKK 578

Query: 625 NVELGEKAANRLFELD 640
           ++++ E+  ++  ELD
Sbjct: 579 SLKIFEEMRSKNLELD 594



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 237/460 (51%), Gaps = 9/460 (1%)

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD  P++ L   N ++  F++N   + AL+L   +   G   D  ++  +L     + 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
              +GK VH   ++ GF   V+V T+LVDMY K   VE    VFD M+ +NVVSW S++A
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G  E+A+++F +M  +G++P   T    L   A  G +E+G+ VH ++ +  L +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            + + NS+++MYSK   V  A  +F  ++ +  VSWN+MI G+  NG   EA   F +MR
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + +K       +VI   A +  + +AK +H  VI++  + ++ + TAL+  Y+KC  + 
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 494 TARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            A  LF MM+  ++V +W  +I GY  +G    A+ LF +M     +PN  T+   ++A 
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA- 405

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
            ++ +    IH    +K +Y   P +    A+ D   + G  NEA    + +  E  I  
Sbjct: 406 -NAAVSPSQIHALV-VKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVA 460

Query: 613 FGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLL 650
           + AML       ++E   K   +L +  ++P+E  +  +L
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVL 500


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/661 (41%), Positives = 415/661 (62%), Gaps = 11/661 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            + +HG  +  G++ D F  + +  +Y K  + ++A K+FD +P  D + WNT++AG   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 217 NGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           +     AL+   RM + GR R D  T+ S L A A    + +G+ VHGY ++ G     +
Sbjct: 193 SE----ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V T L+ +Y+KCG +++A+ +FD M + ++V++N++I+ Y   G  E ++ +F+++   G
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
             P + T++  +   +  G       +H  + + +L  D  ++ +L ++Y +   ++ A 
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF  +  KT+ SWNAMI GYAQNG    A+  F  M+  N++P+  T+ S + A A L 
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +   KW+H ++ +   E NV+VMTALIDMYAKCG++  AR++FD M+ ++V +WN MI 
Sbjct: 429 ALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GYG HG G  A++L+  ML+    P   TFL  I ACSH GLV+EG   F  +  +Y I 
Sbjct: 489 GYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRIT 548

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACKIHKNVELGEKA 632
           P ++H   MVDLLGRAG+LNEA + I + P   I PG  V+GA+LGAC +HKN +L + A
Sbjct: 549 PGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVHKNSDLAKLA 606

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           + +LFELD +  GY+VLL+N+Y +   + + A VR   + + L KTPGC+L+E+ +  H 
Sbjct: 607 SQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHV 666

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIA 751
           F +G   HPQS+ IY++LE L  ++  AGY P T  +++DVE+  +E+++  HSEKLAIA
Sbjct: 667 FMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIA 726

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           FGLL++ PG+ I I KNLRVC DCHNATK+IS VT R I+VRD  RFH F++GVCSCGDY
Sbjct: 727 FGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDY 786

Query: 812 W 812
           W
Sbjct: 787 W 787


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/790 (36%), Positives = 450/790 (56%), Gaps = 80/790 (10%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           + Q++ + ++ Y      +L++C  LK L   +++  +I  + +        KLVS +  
Sbjct: 91  MCQKSELETKTY----GSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYAT 146

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              L +  RVF+ +  K   L++ M+  YAK     +++                     
Sbjct: 147 CGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF------------------ 188

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
                   +I   K I G+                        + E A ++FD++ +RD+
Sbjct: 189 --------KIMVEKGIEGK------------------------RPESASELFDKLCDRDV 216

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           +SWN++++G+  NG  E  L +  +M   G   D  TI+S+L   AN G+L +GKAVH  
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+++ F+  +N S  L+DMY+KCG ++ A  VF+ M  RNVVSW SMIA Y   G  + A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 336

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + + Q+M  +GV+   V I   LHACA  G L+ G  VH  +    + +++ + N+L+ M
Sbjct: 337 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDM 396

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC  ++ A  +FS +  K ++SWN M+                       +KPDS TM
Sbjct: 397 YAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GELKPDSRTM 435

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
             ++PA A LS +   K IH  ++R+ +  +  V  AL+D+Y KCG +G AR LFDM+  
Sbjct: 436 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + + +W VMI GYG HG G  A+  FN+M +   +P++++F+  + ACSHSGL+E+G  +
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +K D+ IEP ++HY  MVDLL R G L++A+ FI+ +PI P  T++GA+L  C+I+ 
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYH 615

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           ++EL EK A R+FEL+P+  GY+VLLANIYA A   +++ ++R  + KKGL+K PGCS +
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675

Query: 685 ELKNEVHSFYSG-STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLS 742
           E+K  V+ F SG ++ HP SK+I + L+ +  ++K  GY P T  ++ + ++  +E  L 
Sbjct: 676 EIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALC 735

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLA+AFGLL   P  TI + KNLRVCGDCH   K++S  T REI++RD +RFH FK
Sbjct: 736 GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795

Query: 803 NGVCSCGDYW 812
           +G CSC  +W
Sbjct: 796 DGYCSCRGFW 805


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/655 (42%), Positives = 411/655 (62%), Gaps = 2/655 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +++ QLIV+G     F M   +N     G +  A+K F  + E D++ WN I+ G+ Q  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             +  + +   M       +  T + +L A        IGK +HG   + GF S V V  
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +LV MYAK G++  AR+VFD +  R VVSW S+I+ YV+ G+P EA+ +F++M    V+P
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             + ++  + A  ++ DL +G  +H L+ +L L  +  +  SL +MY+K   V+ A   F
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           ++++   L+ WNAMI GYA NG   EA+  F +M +KNI+ DS TM S + A A++  + 
Sbjct: 260 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 319

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
            A+W+   + +S +  + FV T LIDMYAKCG++  AR +FD + ++ V  W+VMI GYG
Sbjct: 320 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 379

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A+ L+N+M +    PND TF+  ++AC +SGLV+EG   F  L  D+GIEP  
Sbjct: 380 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGIEPHH 438

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  +VDLLGRAG LN+A+DFI  MPI+PG++V+GA+L ACKIH+ V LGE AA +LF 
Sbjct: 439 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 498

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP   G++V L+N+YA+A +W ++A VR +M +KGL K  G S +E+   + +F  G  
Sbjct: 499 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDR 558

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+SK I+  L+ L   +KAAGYVP   S+ HD+     E  L  HSE+LA+A+G++++
Sbjct: 559 SHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIIST 618

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +PG+T+ I KNLR C +CH+A K IS +  REII+RD  RFH FK+GVCSCGD+W
Sbjct: 619 APGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 248/480 (51%), Gaps = 4/480 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           LK L ++   +I SGL        K ++    +  ++ A + F  + +    L++ ++KG
Sbjct: 15  LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y +   +D  +   + M+   V P  + + Y+LK CG       GK+IHGQ    GF  +
Sbjct: 75  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F    +V+MYAK GQI  A  +FD++ +R +VSW +I++G+ QNG    AL++   M +
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
              + D+I +VS++ A  NV  L  GK++HG   + G +   ++  +L  MYAK G VE 
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR  F+ M+  N++ WN+MI+ Y   G  EEA+++F++M+ + +   ++T+  A+ A A 
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           +G LE   ++   + + +   D  +   LI MY+KC  +  A  +F ++  K +V W+ M
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I+GY  +G   EA+  + +M+   + P+  T + ++ A     +++    +  L+     
Sbjct: 375 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 434

Query: 473 EKNVFVMTALIDMYAKCGAVGTARA-LFDMMNERHVTTWNVMIDGYGTH---GLGKAAVE 528
           E +    + ++D+  + G +  A   +  M  +  V+ W  ++     H    LG+ A E
Sbjct: 435 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 494



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 2/173 (1%)

Query: 43  SALLLEVCTSLKELRRILP-LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           SA+L        EL R L   I KS   D     T L+ ++ K  S+  A  VF+ + DK
Sbjct: 307 SAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADK 366

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              L+  M+ GY       +A+     M+   V P    +  LL  C + G ++ G E+ 
Sbjct: 367 DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF 426

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAG 213
             +  +G        + VV++  + G + +AY     MP +  VS W  +++ 
Sbjct: 427 HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           ++++   ++  +I S   K  F+M   I+     G V  A   F  ++E  +  WN +I 
Sbjct: 14  LLKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIK 73

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           GY    +  A + ++  M      PN  TFL  + AC   G   EGI
Sbjct: 74  GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC--GGTSVEGI 118


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/655 (42%), Positives = 411/655 (62%), Gaps = 2/655 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +++ QLIV+G     F M   +N     G +  A+K F  + E D++ WN I+ G+ Q  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             +  + +   M       +  T + +L A        IGK +HG   + GF S V V  
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +LV MYAK G++  AR+VFD +  R VVSW S+I+ YV+ G+P EA+ +F++M    V+P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             + ++  + A  ++ DL +G  +H L+ +L L  +  +  SL +MY+K   V+ A   F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           ++++   L+ WNAMI GYA NG   EA+  F +M +KNI+ DS TM S + A A++  + 
Sbjct: 245 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 304

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
            A+W+   + +S +  + FV T LIDMYAKCG++  AR +FD + ++ V  W+VMI GYG
Sbjct: 305 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 364

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A+ L+N+M +    PND TF+  ++AC +SGLV+EG   F  L  D+GIEP  
Sbjct: 365 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGIEPHH 423

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  +VDLLGRAG LN+A+DFI  MPI+PG++V+GA+L ACKIH+ V LGE AA +LF 
Sbjct: 424 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 483

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP   G++V L+N+YA+A +W ++A VR +M +KGL K  G S +E+   + +F  G  
Sbjct: 484 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDR 543

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+SK I+  L+ L   +KAAGYVP   S+ HD+     E  L  HSE+LA+A+G++++
Sbjct: 544 SHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIIST 603

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +PG+T+ I KNLR C +CH+A K IS +  REII+RD  RFH FK+GVCSCGD+W
Sbjct: 604 APGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 247/479 (51%), Gaps = 4/479 (0%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           K L ++   +I SGL        K ++    +  ++ A + F  + +    L++ ++KGY
Sbjct: 1   KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
            +   +D  +   + M+   V P  + + Y+LK CG       GK+IHGQ    GF  ++
Sbjct: 61  TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F    +V+MYAK GQI  A  +FD++ +R +VSW +I++G+ QNG    AL++   M + 
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             + D+I +VS++ A  NV  L  GK++HG   + G +   ++  +L  MYAK G VE A
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 240

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R  F+ M+  N++ WN+MI+ Y   G  EEA+++F++M+ + +   ++T+  A+ A A +
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           G LE   ++   + + +   D  +   LI MY+KC  +  A  +F ++  K +V W+ MI
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           +GY  +G   EA+  + +M+   + P+  T + ++ A     +++    +  L+     E
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 420

Query: 474 KNVFVMTALIDMYAKCGAVGTARA-LFDMMNERHVTTWNVMIDGYGTH---GLGKAAVE 528
            +    + ++D+  + G +  A   +  M  +  V+ W  ++     H    LG+ A E
Sbjct: 421 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 479



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 2/173 (1%)

Query: 43  SALLLEVCTSLKELRRILP-LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           SA+L        EL R L   I KS   D     T L+ ++ K  S+  A  VF+ + DK
Sbjct: 292 SAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADK 351

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              L+  M+ GY       +A+     M+   V P    +  LL  C + G ++ G E+ 
Sbjct: 352 DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF 411

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAG 213
             +  +G        + VV++  + G + +AY     MP +  VS W  +++ 
Sbjct: 412 HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/693 (40%), Positives = 422/693 (60%), Gaps = 5/693 (0%)

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           V+ +  M    ++P  ++ + +L  C  + +   G ++HG LI  G+  D F+   +++M
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAK G  E A  +F  +P+ D+VSWN ++AG   +   +LAL L+ +M          T+
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S L A A +G +++G+ +H   M+   +    V   L+DMY+KCG ++ AR+VFD M  
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF- 361
           ++V+ WNS+I+ Y   G   EAM +F  M  +G+E    T+   L + A  G    G   
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA--GSQANGFCE 410

Query: 362 -VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH +  +     D  + NSL+  Y KC  ++ AA +F     + LV++ +MI  Y+Q G
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              EAL  + +M+ ++IKPD+F   S+  A A LS     K IH  V++     +VF   
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +L++MYAKCG++  A  +F+ ++ R + +W+ MI G   HG G+ A++LF +ML+    P
Sbjct: 531 SLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILP 590

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N IT +  +SAC+H+GLV E   +F  ++K +GI P  +HY  MVD+LGR GRL+EA   
Sbjct: 591 NHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVL 650

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           +++MP +    V+GA+LGA +IHKN+ELG  AA  L  L+P++ G H+LLANIYA+  MW
Sbjct: 651 VKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMW 710

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           D +AKVR  M+   ++K PG S +ELK++V++F  G   HP+SK IY  L+ L + + +A
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSA 770

Query: 721 GYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVP   + +HDVE   +E LL  HSEKLA+AFGL+ + PG+ I ++KNLRVC DCH A 
Sbjct: 771 GYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAF 830

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS V  REIIVRD++RFH F++G CSCGDYW
Sbjct: 831 KFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 257/499 (51%), Gaps = 20/499 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  L++     ++   +IK G          L+ ++ K      A  VF  IP   
Sbjct: 194 VLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPD 253

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ G       D A+  L +M    VAP ++  +  LK C  +G ++ G+++H 
Sbjct: 254 IVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHS 313

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L+      D F   G+++MY+KCG +++A  +FD MP +D++ WN+I++G++  G+   
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIE 373

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L T M++EG   +  T+ +IL + A   +    + VH  ++++G+     V+ +L+D
Sbjct: 374 AMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLD 433

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  +E A  VF+   + ++V++ SMI AY + G  EEA++++ +M D+ ++P    
Sbjct: 434 SYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFI 493

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
                +ACA+L   E+G  +H  + +  L +DV   NSL++MY+KC  +D A+ IF+++ 
Sbjct: 494 FSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS 553

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSW+AMI G AQ+G   +AL  F +M    I P+  T+VSV+ A     ++  A+ 
Sbjct: 554 WRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARR 613

Query: 463 IHALVIRSCFEKNVFVMT-------ALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMI 514
              L+      + +F +T        ++D+  + G +  A  L  +M  +     W  ++
Sbjct: 614 FFGLM------EKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667

Query: 515 DGYGTHG---LGKAAVELF 530
                H    LG+ A E+ 
Sbjct: 668 GAARIHKNIELGRHAAEML 686



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 272/581 (46%), Gaps = 57/581 (9%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN---------YTYLLKVCGDVGEIRRGK 158
           T+L+   K   ++ +V ++  +R +DV+  + +         Y  LL       ++  G 
Sbjct: 11  TVLRKPLKPFIVNTSVKYISNLRPNDVSGFILDSSSNPSSISYPKLLLQFTASKDVSSGM 70

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IH ++I       L     +VN+Y+KC     A K+     E DLVSW+ +++G+ QNG
Sbjct: 71  AIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNG 127

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA------------------ 260
             E AL     M+  G +G+  T  S+L   +   +L +GK                   
Sbjct: 128 RGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPN 187

Query: 261 ----------------------VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
                                 VHGY ++ G+DS    + AL+DMYAK G  E A  VF 
Sbjct: 188 EFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFY 247

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +   ++VSWN++IA  V     + A+++  KM    V P+  T+  AL ACA +G ++ 
Sbjct: 248 EIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKL 307

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H  L ++ +  D  +   LI MYSKC  +  A  +F  +  K ++ WN++I GY+ 
Sbjct: 308 GRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSN 367

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
            G   EA++ F  M  + ++ +  T+ +++ + A      + + +H + I+S ++ + +V
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             +L+D Y KC  +  A  +F++     +  +  MI  Y  +GLG+ A++++ +M +   
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           KP+   F    +AC++    E+G      + K  G+   +    ++V++  + G +++A 
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLK-CGLLSDVFAGNSLVNMYAKCGSIDDAS 546

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
               ++    GI  + AM+G    H +   G KA    +++
Sbjct: 547 CIFNEISWR-GIVSWSAMIGGLAQHGH---GRKALQLFYQM 583


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/786 (37%), Positives = 459/786 (58%), Gaps = 11/786 (1%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           +P   +  P   +L+ C  ++++ R   I  LIIK G          LVS++ K N +  
Sbjct: 6   VPFDSFTFPC--VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63

Query: 91  AARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           A ++F+ + ++ D + +++++  Y+      +A+     M+   V    Y     L+ C 
Sbjct: 64  ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           D    + G EIH  ++ +   LD++    +V M+ + G++  A ++FD + E+D ++WN+
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           ++AGF QNG    AL     + +   + D ++++SIL A   +G L  GK +H YAM+  
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            DS + +   L+DMY+KC  V  A LVFD M +++++SW ++IAAY +     EA+++ +
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG-TDVSMTNSLISMYSKC 388
           K+  +G++   + I   L AC+ L  L     VH     LK G +D+ M N +I +Y+ C
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGY--TLKRGLSDLMMQNMIIDVYADC 361

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             ++ A  +F  ++ K +VSW +MI  Y  NG  NEAL  F  M+  +++PDS T+VS++
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSIL 421

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A LS +   K IH  + R  F      + +L+DMYA CG++  A  +F     + + 
Sbjct: 422 SAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLV 481

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            W  MI+ YG HG GKAAVELF+ M +    P+ ITFL  + ACSHSGL+ EG     ++
Sbjct: 482 LWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETM 541

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           K  Y +EP  +HY  +VDLLGRA  L EA+ F++ M IEP   V+ A LGAC+IH N +L
Sbjct: 542 KCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKL 601

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           GE AA +L +LDPD  G +VL++N++AA+  W  + +VR  M+  GL+K PGCS +E+ N
Sbjct: 602 GEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGN 661

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
           +VH+F      HP+S +IY  L  + +++ K  GYVP T  + H+V    +  +L  HSE
Sbjct: 662 KVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSE 721

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           +LAIA+GL+++S G+ I I KNLRVC DCH   K +S    RE+IVRD  RFH F++GVC
Sbjct: 722 RLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVC 781

Query: 807 SCGDYW 812
           SCGD+W
Sbjct: 782 SCGDFW 787



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 129/234 (55%), Gaps = 3/234 (1%)

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           GV   + T    L AC  + D+ RG  +H L+ +    + V + NSL+SMY+KC  +  A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 395 ADIFSKLQGKT-LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
             +F ++  +  +VSWN++I  Y+ NG+  EAL  F +M+   +  +++T+V+ + A  +
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            S  +    IHA +++S    +V+V  AL+ M+ + G +  A  +FD ++E+   TWN M
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYF 565
           I G+  +GL   A++ F  + +   KP++++ +  ++A    G +  G  IH +
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           MR   +  DSFT   V+ A   +  I     IH L+I+  ++  VFV  +L+ MYAKC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 492 VGTARALFDMMNERH-VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           +  AR LFD MNER+ V +WN +I  Y  +G    A+ LF +M +     N  T + A+ 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           AC  S   + G+    ++ K      V+D Y   A+V +  R G+++ A     ++  + 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKS---NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177

Query: 609 GIT 611
            IT
Sbjct: 178 NIT 180


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/759 (36%), Positives = 453/759 (59%), Gaps = 4/759 (0%)

Query: 56  LRRILPLIIKSGLC-DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           L++I+  +IK+G+C D HL+ + LV+++ K  SL  A +V E +P +    ++  L    
Sbjct: 8   LKKIIFRVIKNGICPDSHLW-SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSAN 66

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
               L +AV     MR+  +    + +  L+     +G+   G+ IH  +   GF  D+ 
Sbjct: 67  SPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDIL 126

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
                V MY K   +E  ++ F  M   +L S N +++GF      +    ++ ++  EG
Sbjct: 127 ISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG 186

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              +  T +SIL   A+ G L  GKA+HG  +++G +   ++  +LV++YAKCG    A 
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VF  +  R+VVSW ++I  +V  G     +RIF +ML +G  P   T +  L +C+ L 
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLS 305

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
           D++ G  VH  + +  L  +  +  +L+ MY+K + ++ A  IF++L  + L +W  ++ 
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           GYAQ+G+  +A+  F +M+ + +KP+ FT+ S +   + ++ +   + +H++ I++    
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           ++FV +AL+DMYAKCG V  A  +FD +  R   +WN +I GY  HG G  A++ F  ML
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +  T P+++TF+  +SACSH GL+EEG  +F SL K YGI P ++HY  MVD+LGRAG+ 
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           +E   FI++M +   + ++  +LGACK+H N+E GE+AA +LFEL+P+    ++LL+N++
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           AA  MWD +  VR +M  +G++K PGCS VE+  +VH F S    HP+ + I+  L+ L 
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 665

Query: 715 DEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
            ++ + GY P+T+ + H+V D  ++ LL  HSE+LA+AF LL++S   TI I KNLR+CG
Sbjct: 666 QKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICG 725

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH+  K IS +T +E++VRD++ FH FKNG CSC ++W
Sbjct: 726 DCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 185/318 (58%), Gaps = 6/318 (1%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLC-DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +L+ C S   L E + I   +IKSG+  D HL+ + LV+++ K  S + A +VF  IP++
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS-LVNVYAKCGSANYACKVFGEIPER 255

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  ++ G+         +    +M  +   P +Y +  +L+ C  + ++  GK++H
Sbjct: 256 DVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 314

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            Q++ N    + F  T +V+MYAK   +E+A  +F+R+ +RDL +W  IVAG+AQ+G  E
Sbjct: 315 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+    +M  EG + +  T+ S L   + + +L  G+ +H  A++AG    + V++ALV
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAKCG VE A +VFDG+ SR+ VSWN++I  Y + G   +A++ F+ MLD+G  P  V
Sbjct: 435 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 494

Query: 342 TIMEALHACADLGDLERG 359
           T +  L AC+ +G +E G
Sbjct: 495 TFIGVLSACSHMGLIEEG 512


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 281/771 (36%), Positives = 447/771 (57%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT +K      ++  L+ K G   +      LV+L+ +  +   A +VF  +  K 
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           +  +++++ G A+    D A+    +M+ D + P       LL  C   G + +G+++H 
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  G S D+     ++++Y  C  I+ A++MF      ++V WN ++  F +      
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +  +  +M  +G   +  T  SIL    +VG+L +G+ +H   ++ GF   V V + L+D
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G+++TA ++   +   +VVSW ++I+ Y +     EA++ F++ML++G++  N+ 
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
              A+ ACA +  L +G  +H          D+S+ N+L+S+Y++C ++  A   F K+ 
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  +SWN +I G+AQ+G   +AL  F +M    ++   FT  S + A A ++ I+  K 
Sbjct: 579 AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ 638

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA++I+  F+ ++ V  ALI  YAKCG++  AR  F  M E++  +WN MI GY  HG 
Sbjct: 639 IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGY 698

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  AV LF KM +    PN +TF+  +SACSH GLV +G+ YF S+ K++G+ P   HY 
Sbjct: 699 GNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYA 758

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VDL+ RAG L+ A  FI++MPIEP  T++  +L AC +HKNVE+GE AA  L EL+P+
Sbjct: 759 CVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPE 818

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N+YA +  WD   + R +M  +G++K PG S +E+KN VH+FY G   HP 
Sbjct: 819 DSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPL 878

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           + +IY FL  L  +    GY  D  S ++DVE   ++  +  HSEKLAI FGLL+ S   
Sbjct: 879 ADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTV 938

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IH+ KNLRVC DCH+  K++S ++ R IIVRD +RFH F+ G+CSC DYW
Sbjct: 939 PIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/621 (27%), Positives = 312/621 (50%), Gaps = 12/621 (1%)

Query: 44  ALLLEVCTS----LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A +L  C+     ++   +I   II  GL    +    L+ L+ K   +  A +VF+ + 
Sbjct: 115 ASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC 174

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    +  M+ G+++    ++A+     M    + P  Y ++ +L  C  +     G++
Sbjct: 175 TKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQ 234

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  +   G SL+ +    +V +Y++      A K+F +M  +D VS+N++++G AQ GF
Sbjct: 235 LHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGF 294

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           ++ AL+L T+M  +  + D +T+ S+L A A+ G+L  G+ +H Y ++AG  S + V  A
Sbjct: 295 SDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGA 354

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y  C  ++TA  +F   ++ NVV WN M+ A+ +  N  E+ RIF++M  +G+ P 
Sbjct: 355 LLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPN 414

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C  +G L+ G  +H  + +     +V + + LI MY+K  K+D A  I  
Sbjct: 415 QFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILR 474

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L    +VSW A+I GYAQ+    EAL +F +M ++ I+ D+    S I A A +  +  
Sbjct: 475 TLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQ 534

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + IHA    S + +++ +  AL+ +YA+CG +  A   F+ ++ +   +WN +I G+  
Sbjct: 535 GRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ 594

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            G  + A+++F +M     + +  TF  A+SA ++   +++G      + K  G +  ++
Sbjct: 595 SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKR-GFDSDIE 653

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
              A++    + G + +A     +MP E     + AM+     H     G +A N LFE 
Sbjct: 654 VSNALITFYAKCGSIEDARREFCEMP-EKNDVSWNAMITGYSQHG---YGNEAVN-LFEK 708

Query: 640 DPDEGGY--HVLLANIYAAAS 658
               G    HV    + +A S
Sbjct: 709 MKQVGEMPNHVTFVGVLSACS 729



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 294/582 (50%), Gaps = 15/582 (2%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C    SL E +++   I+K G  ++ +   KLV ++     L    +VFE +P++ 
Sbjct: 16  LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEIH 161
              +  ++ G+ +    +  +     M  ++V+P   ++  +L+ C G    IR  ++IH
Sbjct: 76  VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIH 135

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            ++I +G          ++ +YAK G I  A K+FD +  +D VSW  +++GF+QNG+ E
Sbjct: 136 ARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEE 195

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+ L   MH  G         S+L     +    +G+ +H    + G      V  ALV
Sbjct: 196 EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALV 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            +Y++     +A  VF  M+S++ VS+NS+I+   + G  + A+ +F KM    ++P  V
Sbjct: 256 TLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCV 315

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L ACA  G L +G  +H  + +  + +D+ +  +L+ +Y  C  +  A ++F   
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           Q + +V WN M++ + +   ++E+   F +M+ K + P+ FT  S++     +  +   +
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  VI++ F+ NV+V + LIDMYAK G + TA  +   + E  V +W  +I GY  H 
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH---YFTSLKKDYGIEP 576
           L   A++ F +ML    + ++I F  AISAC+    + +G  IH   Y +   +D  I  
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIG- 554

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
                 A+V L  R GR+ EA+   +K+  +  I+  G + G
Sbjct: 555 -----NALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG 591



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 237/471 (50%), Gaps = 4/471 (0%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M +  +      Y +LL +C + G +   K++HG+++  GF  +      +V++Y   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           ++   K+F+ MP R + SW+ I++GF +   +   LDL + M EE      I+  S+L A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 249 VAN--VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            +   +G +R  + +H   +  G      +S  L+ +YAK G + +AR VFD + +++ V
Sbjct: 121 CSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SW +MI+ + + G  EEA+ +F +M   G+ PT       L  C  +   + G  +H L+
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +     +  + N+L+++YS+      A  +FSK+Q K  VS+N++I G AQ G  + AL
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F KM+   +KPD  T+ S++ A A    +   + +H+ VI++    ++ V  AL+D+Y
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLY 359

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
             C  + TA  +F      +V  WNVM+  +G       +  +F +M      PN  T+ 
Sbjct: 360 VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYP 419

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             +  C+  G ++ G    T + K  G +  +     ++D+  + G+L+ A
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTA 469


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/771 (35%), Positives = 442/771 (57%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT  K   + R I   + K   C +      L++L+  + S   A RVF  +    
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ G+A+    + A+     M+   + P       LL  C  VG++++GK++H 
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L+  G S D      ++++Y KCG IE A+ +F+     ++V WN ++  + Q      
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           + ++  +M   G   +  T   IL      G + +G+ +H  +++ GF+S + VS  L+D
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+K G ++ AR + + ++ R+VVSW SMIA YV+    EEA+  F++M D GV P N+ 
Sbjct: 390 MYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  A  ACA +  + +G+ +H  +       D+S+ N+L+++Y++C + + A  +F +++
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  ++WN +I G+ Q+    +AL  F KM     K + FT +S I ALA L+ I+  K 
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H   +++       V  ALI +Y KCG++  A+ +F  M+ R+  +WN +I     HG 
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++LF++M +   KPND+TF+  ++ACSH GLVEEG+ YF S+   YG+ P+ DHY 
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L+ A  F+ +MPI     ++  +L ACK+HKN+E+GE AA  L EL+P 
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N YA    W    +VR +M+ +G++K PG S +E+KN VH+F+ G   HP 
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809

Query: 703 SKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S +IY FL  L D +   GY  +  N  H+ E   ++     HSEKLA+AFGL+   P  
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLRVC DCH+  K  S VT REI++RD++RFH F +G CSCGDYW
Sbjct: 870 PLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 170/559 (30%), Positives = 277/559 (49%), Gaps = 6/559 (1%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           GL    L    L+ L+ K   +  A +VF+ +  +    +  ML GYA+     +A    
Sbjct: 73  GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY 132

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
            +M +  V P  Y  + +L  C       +G+ IH Q+    F  + F    ++ +Y   
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G  + A ++F  M   D V++NT+++G AQ G  E AL +   M   G R D +T+ S+L
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252

Query: 247 PAVANVGSLRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            A A+VG L+ GK +H Y ++AG  FD I   S  L+D+Y KCG +ETA  +F+     N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGS--LLDLYVKCGDIETAHDIFNLGDRTN 310

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VV WN M+ AY +  +  ++  IF +M   G+ P   T    L  C   G +E G  +H 
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS 370

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L  +    +D+ ++  LI MYSK   +D+A  I   L+ + +VSW +MI GY Q+    E
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEE 430

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M+   + PD+  + S   A A +  +R    IHA V  S +  ++ +   L++
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVN 490

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +YA+CG    A +LF  +  +   TWN +I G+G   L K A+ +F KM +   K N  T
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+ AISA ++   +++G        K  G     +   A++ L G+ G + +A     +M
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEM 609

Query: 605 PIEPGITVFGAMLGACKIH 623
            +   ++ +  ++ +C  H
Sbjct: 610 SLRNEVS-WNTIITSCSQH 627



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 268/566 (47%), Gaps = 38/566 (6%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           EIH   +V G   D      ++++YAK G + +A ++F  +  RD VSW  +++G+AQ+G
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A  L ++MH          + S+L A         G+ +H    +  F S   V  
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+ +Y   G  + A  VF  M   + V++N++I+ + + G+ E A++IF +M   G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT+   L ACA +GDL++G  +H  L +  +  D     SL+ +Y KC  ++ A DIF
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           +      +V WN M++ Y Q   + ++   F +M++  I P+ FT   ++        I 
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + IH+L I++ FE +++V   LIDMY+K G +  AR + +M+ +R V +W  MI GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-----YFTSLKKDYG 573
            H   + A+  F +M +    P++I    A SAC+    + +G+      Y +    D  
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM--LGACKIHKN-----V 626
           I      +  +V+L  R GR  EA+   +++  +  IT  G +   G  +++K      +
Sbjct: 484 I------WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ----KTPGCS 682
           ++G+  A                  N++   S    LA +  I + K +     KT   S
Sbjct: 538 KMGQAGAKY----------------NVFTFISAISALANLADIKQGKQVHGRAVKTGHTS 581

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYT 708
             E+ N + S Y        +K I++
Sbjct: 582 ETEVANALISLYGKCGSIEDAKMIFS 607


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 446/757 (58%), Gaps = 2/757 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
           ++  + + +G          LV+++  +  + DA RVF     + +A+ ++ ++  Y K 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA+     M +  + P  + ++ ++  C     I  G+++H  ++  G+  D+F  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY K G+++ A  +F++MP+ D+VSWN +++G   NG    A++L+ +M   G  
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T+ SIL A +  G+  +G+ +HG+ ++A  DS   +   LVDMYAK   ++ AR V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD M  R+++  N++I+    GG  +EA+ +F ++  +G+     T+   L + A L   
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                VH L  ++    D  + N LI  Y KC  +  A  +F +     +++  +MI   
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           +Q      A+  F +M  K ++PD F + S++ A A LS     K +HA +I+  F  + 
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F   AL+  YAKCG++  A   F  + ER V +W+ MI G   HG GK A+ELF +M++ 
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN IT    + AC+H+GLV+E   YF S+K+ +GI+   +HY  M+DLLGRAG+L++
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A + +  MP +   +++GA+LGA ++HK+ ELG+ AA +LF L+P++ G HVLLAN YA+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           A MW+++AKVR +M+   ++K P  S +E+K++VH+F  G   HP +K IY  L  L D 
Sbjct: 721 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 780

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           +  AG+VP+ +  +HD++   +E LLS HSE+LA+AF LL++ PG+ I ++KNLR+C DC
Sbjct: 781 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H A K+IS +  REII+RD++RFH F++G CSCGDYW
Sbjct: 841 HVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 264/572 (46%), Gaps = 10/572 (1%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
           F+  L+S + K      A R F+ IPD     + +++  Y+       A+     MR + 
Sbjct: 39  FRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V    +    +LK   D    R G ++H   +  GF  D+F    +V MY   G +++A 
Sbjct: 99  VCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDAR 155

Query: 194 KMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           ++F+    ER+ VSWN +++ + +N     A+ +   M   G +        ++ A    
Sbjct: 156 RVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 215

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            ++  G+ VH   +R G+D  V  + ALVDMY K GRV+ A ++F+ M   +VVSWN++I
Sbjct: 216 RNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALI 275

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           +  V  G+   A+ +  +M   G+ P   T+   L AC+  G  + G  +H  + +    
Sbjct: 276 SGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANAD 335

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +D  +   L+ MY+K   +D A  +F  +  + L+  NA+I G +  GR +EAL+ F ++
Sbjct: 336 SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYEL 395

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R + +  +  T+ +V+ + A L      + +HAL ++  F  +  V+  LID Y KC  +
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  +F+  +   +     MI        G+ A++LF +ML    +P+       ++AC
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +     E+G      L K   +        A+V    + G + +A      +P E G+  
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVS 573

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           + AM+G    H +     K A  LF    DEG
Sbjct: 574 WSAMIGGLAQHGH----GKRALELFGRMVDEG 601



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 252/492 (51%), Gaps = 10/492 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDK 101
           ++  CT  + +   R++  ++++ G  D+ +F    LV ++ K   +  A+ +FE +PD 
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               ++ ++ G         A+  L++M+Y  + P V+  + +LK C   G    G++IH
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIH 326

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G +I      D +   G+V+MYAK   +++A K+FD M  RDL+  N +++G +  G  +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L   + +EG   +  T+ ++L + A++ +    + VH  A++ GF    +V   L+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           D Y KC  +  A  VF+   S ++++  SMI A  +  + E A+++F +ML +G+EP   
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +   L+ACA L   E+G  VH  L + +  +D    N+L+  Y+KC  ++ A   FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + +VSW+AMI G AQ+G    AL  F +M  + I P+  TM SV+ A     ++  AK
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            + +++      ++     + +ID+  + G +  A  L + M  + + + W  ++     
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 520 HG---LGKAAVE 528
           H    LGK A E
Sbjct: 687 HKDPELGKLAAE 698



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 199/378 (52%), Gaps = 6/378 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  +H  L+ +G SL  F    +++ Y+KC +   A + FD +P+   VSW+++V  ++ 
Sbjct: 23  GAHLHASLLKSG-SLASF-RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    A+     M  EG   +   +  +L  V +    R+G  VH  AM  GF S V V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137

Query: 277 STALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + ALV MY   G ++ AR VF+   S RN VSWN +++AYV+     +A+++F +M+  G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++PT       ++AC    ++E G  VH ++ ++    DV   N+L+ MY K  +VD A+
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF K+    +VSWNA+I G   NG  + A+    +M+   + P+ FT+ S++ A +   
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                + IH  +I++  + + ++   L+DMYAK   +  AR +FD M  R +   N +I 
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 516 GYGTHGLGKAAVELFNKM 533
           G    G    A+ LF ++
Sbjct: 378 GCSHGGRHDEALSLFYEL 395



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 159/328 (48%), Gaps = 8/328 (2%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI   L   A   +L  G  +H   +++G  S+ +    L+  Y+KC R   AR  FD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEI 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY   G P  A++ F  M  +GV   N   +  +  C  + D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGV-CCNEFALPVVLKC--VPDARLGA 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQN 419
            VH +      G+DV + N+L++MY     +D A  +F++    +  VSWN ++  Y +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            +  +A+  F +M    I+P  F    V+ A      I   + +HA+V+R  ++K+VF  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY K G V  A  +F+ M +  V +WN +I G   +G    A+EL  +M      
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYF 565
           PN  T    + ACS +G  + G  IH F
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGF 328



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 39/357 (10%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           TI + L   A    L  G  +H  L  LK G+  S  N LIS YSKC++   A   F ++
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASL--LKSGSLASFRNHLISFYSKCRRPCCARRFFDEI 63

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
                VSW++++  Y+ NG    A+  F  MR++ +  + F +  V+  + +    R   
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGA 120

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            +HA+ + + F  +VFV  AL+ MY   G +  AR +F+  + ER+  +WN ++  Y  +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
                A+++F +M+    +P +  F C ++AC+ S  +E G      + +  G +  +  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR-MGYDKDVFT 239

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI----HKNVELGEKAANRL 636
             A+VD+  + GR++ A    +KMP +  +  + A++  C +    H+ +EL       L
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL-------L 291

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++      Y  L+ N++  +S+               L+   G    +L  ++H F
Sbjct: 292 LQMK-----YSGLVPNVFTLSSI---------------LKACSGAGAFDLGRQIHGF 328


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 281/738 (38%), Positives = 427/738 (57%), Gaps = 73/738 (9%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           KLVS +     L +  RVF+ +  K   L++ M+  YAK     +++             
Sbjct: 1   KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF---------- 50

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
                           +I   K I G+                        + E A ++F
Sbjct: 51  ----------------KIMVEKGIEGK------------------------RSESASELF 70

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D++ +RD++SWN++++G+  NG  E  L +  +M   G   D  TI+S+L   A  G+L 
Sbjct: 71  DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           +GKAVH  A+++ F+  +N S  L+DMY+KCG ++ A  VF+ M  RNVVSW SMIA Y 
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
             G  + A+ + Q+M  +GV+   V I   LHACA  G L+ G  VH  +    + +++ 
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+L+ MY+KC  ++ A  +FS +  K ++SWN M+                       
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GE 289

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +KPDS TM  ++PA A LS +   K IH  ++R+ +  +  V  AL+D+Y KCG +G AR
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            LFDM+  + + +W VMI GYG HG G  A+  FN+M +   +P++++F+  + ACSHSG
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           L+E+G  +F  +K D+ IEP ++HY  MVDLL R G L++A+ FI+ +PI P  T++GA+
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L  C+I+ ++EL EK A R+FEL+P+  GY+VLLANIYA A  W+++ ++R  + KKGL+
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529

Query: 677 KTPGCSLVELKNEVHSFYSG-STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVED 734
           K PGCS +E+K  V+ F SG ++ HP SK+I + L+ +  ++K  GY P T  ++ + ++
Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 589

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E  L  HSEKLA+AFGLL   P  TI + KNLRVCGDCH   K++S  T REI++RD
Sbjct: 590 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 649

Query: 795 MHRFHCFKNGVCSCGDYW 812
            +RFH FK+G CSC  +W
Sbjct: 650 SNRFHHFKDGYCSCRGFW 667



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 178/356 (50%), Gaps = 23/356 (6%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L IKS    +  F   L+ ++ K   L  A RVFE + ++    + +M+ GY +    D 
Sbjct: 138 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 197

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+  L +M  + V   V   T +L  C   G +  GK++H  +  N  + +LF    +++
Sbjct: 198 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMD 257

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MYAKCG +E A  +F  M  +D++SWNT+V                        + D  T
Sbjct: 258 MYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL---------------------KPDSRT 296

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +  ILPA A++ +L  GK +HGY +R G+ S  +V+ ALVD+Y KCG +  ARL+FD + 
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI- 360
           S+++VSW  MIA Y   G   EA+  F +M D G+EP  V+ +  L+AC+  G LE+G  
Sbjct: 357 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG 415
           F + + +   +   +     ++ + S+   + +A      L        W A++ G
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 7/195 (3%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C SL  L R   I   I+++G          LV L+ K   L  A  +F+ IP 
Sbjct: 298 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 357

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  M+ GY      ++A++    MR   + P   ++  +L  C   G + +G   
Sbjct: 358 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 417

Query: 161 HGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
              ++ N F+++  L     +V++ ++ G + +AYK  + +P   D   W  ++ G    
Sbjct: 418 F-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476

Query: 218 GFAELALDLVTRMHE 232
              ELA  +  R+ E
Sbjct: 477 HDIELAEKVAERVFE 491


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 446/757 (58%), Gaps = 2/757 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
           ++  + + +G          LV+++  +  + DA RVF     + +A+ ++ ++  Y K 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA+     M +  + P  + ++ ++  C     I  G+++H  ++  G+  D+F  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY K G+++ A  +F++MP+ D+VSWN +++G   NG    A++L+ +M   G  
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T+ SIL A +  G+  +G+ +HG+ ++A  DS   +   LVDMYAK   ++ AR V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD M  R+++  N++I+    GG  +EA+ +F ++  +G+     T+   L + A L   
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                VH L  ++    D  + N LI  Y KC  +  A  +F +     +++  +MI   
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           +Q      A+  F +M  K ++PD F + S++ A A LS     K +HA +I+  F  + 
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F   AL+  YAKCG++  A   F  + ER V +W+ MI G   HG GK A+ELF +M++ 
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN IT    + AC+H+GLV+E   YF S+K+ +GI+   +HY  M+DLLGRAG+L++
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A + +  MP +   +++GA+LGA ++HK+ ELG+ AA +LF L+P++ G HVLLAN YA+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           A MW+++AKVR +M+   ++K P  S +E+K++VH+F  G   HP +K IY  L  L D 
Sbjct: 721 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 780

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           +  AG+VP+ +  +HD++   +E LLS HSE+LA+AF LL++ PG+ I ++KNLR+C DC
Sbjct: 781 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H A K+IS +  REII+RD++RFH F++G CSCGDYW
Sbjct: 841 HVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 265/572 (46%), Gaps = 10/572 (1%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
           F+  L+S + K      A RVF+ IPD     + +++  Y+       A+     MR + 
Sbjct: 39  FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V    +    +LK   D    R G ++H   +  GF  D+F    +V MY   G +++A 
Sbjct: 99  VCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDAR 155

Query: 194 KMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           ++F+    ER+ VSWN +++ + +N     A+ +   M   G +        ++ A    
Sbjct: 156 RVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 215

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            ++  G+ VH   +R G+D  V  + ALVDMY K GRV+ A ++F+ M   +VVSWN++I
Sbjct: 216 RNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALI 275

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           +  V  G+   A+ +  +M   G+ P   T+   L AC+  G  + G  +H  + +    
Sbjct: 276 SGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANAD 335

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +D  +   L+ MY+K   +D A  +F  +  + L+  NA+I G +  GR +EAL+ F ++
Sbjct: 336 SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYEL 395

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R + +  +  T+ +V+ + A L      + +HAL ++  F  +  V+  LID Y KC  +
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  +F+  +   +     MI        G+ A++LF +ML    +P+       ++AC
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +     E+G      L K   +        A+V    + G + +A      +P E G+  
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP-ERGVVS 573

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           + AM+G    H +     K A  LF    DEG
Sbjct: 574 WSAMIGGLAQHGH----GKRALELFGRMVDEG 601



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 252/492 (51%), Gaps = 10/492 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDK 101
           ++  CT  + +   R++  ++++ G  D+ +F    LV ++ K   +  A+ +FE +PD 
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               ++ ++ G         A+  L++M+Y  + P V+  + +LK C   G    G++IH
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIH 326

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G +I      D +   G+V+MYAK   +++A K+FD M  RDL+  N +++G +  G  +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L   + +EG   +  T+ ++L + A++ +    + VH  A++ GF    +V   L+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           D Y KC  +  A  VF+   S ++++  SMI A  +  + E A+++F +ML +G+EP   
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +   L+ACA L   E+G  VH  L + +  +D    N+L+  Y+KC  ++ A   FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + +VSW+AMI G AQ+G    AL  F +M  + I P+  TM SV+ A     ++  AK
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            + +++      ++     + +ID+  + G +  A  L + M  + + + W  ++     
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 520 HG---LGKAAVE 528
           H    LGK A E
Sbjct: 687 HKDPELGKLAAE 698



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 200/378 (52%), Gaps = 6/378 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  +H  L+ +G SL  F    +++ Y+KC +   A ++FD +P+   VSW+++V  ++ 
Sbjct: 23  GAHLHASLLKSG-SLASF-RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    A+     M  EG   +   +  +L  V +    R+G  VH  AM  GF S V V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137

Query: 277 STALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + ALV MY   G ++ AR VF+   S RN VSWN +++AYV+     +A+++F +M+  G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++PT       ++AC    ++E G  VH ++ ++    DV   N+L+ MY K  +VD A+
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF K+    +VSWNA+I G   NG  + A+    +M+   + P+ FT+ S++ A +   
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                + IH  +I++  + + ++   L+DMYAK   +  AR +FD M  R +   N +I 
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 516 GYGTHGLGKAAVELFNKM 533
           G    G    A+ LF ++
Sbjct: 378 GCSHGGRHDEALSLFYEL 395



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 8/328 (2%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI   L   A   +L  G  +H   +++G  S+ +    L+  Y+KC R   AR VFD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY   G P  A++ F  M  +GV   N   +  +  C  + D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGV-CCNEFALPVVLKC--VPDARLGA 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQN 419
            VH +      G+DV + N+L++MY     +D A  +F++    +  VSWN ++  Y +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            +  +A+  F +M    I+P  F    V+ A      I   + +HA+V+R  ++K+VF  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY K G V  A  +F+ M +  V +WN +I G   +G    A+EL  +M      
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYF 565
           PN  T    + ACS +G  + G  IH F
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGF 328



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 167/357 (46%), Gaps = 39/357 (10%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           TI + L   A    L  G  +H  L  LK G+  S  N LIS YSKC++   A  +F ++
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASL--LKSGSLASFRNHLISFYSKCRRPCCARRVFDEI 63

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
                VSW++++  Y+ NG    A+  F  MR++ +  + F +  V+  + +    R   
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---ARLGA 120

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            +HA+ + + F  +VFV  AL+ MY   G +  AR +F+  + ER+  +WN ++  Y  +
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
                A+++F +M+    +P +  F C ++AC+ S  +E G      + +  G +  +  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR-MGYDKDVFT 239

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI----HKNVELGEKAANRL 636
             A+VD+  + GR++ A    +KMP +  +  + A++  C +    H+ +EL       L
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL-------L 291

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++      Y  L+ N++  +S+               L+   G    +L  ++H F
Sbjct: 292 LQMK-----YSGLVPNVFTLSSI---------------LKACSGAGAFDLGRQIHGF 328


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/733 (38%), Positives = 439/733 (59%), Gaps = 3/733 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++  +  A RVF  +P++    ++ M+ GY K   L++A+    RM +  + P 
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPD 196

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG + + R G+E+H  ++  GF  ++  +  +V MYAKCG I  A K+FD
Sbjct: 197 VYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +N   E  L+L   M E   + + +TI S+  A   +  +  
Sbjct: 257 GMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF 316

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +HG+A++ GF   V    +L+ MY   GR+  A  +F  M++++ +SW +MI+ Y +
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P +VTI  AL ACA LG L+ GI +H+L         V +
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ MY+K K +D+A ++F  +  K +VSW++MI G+  N R  EAL YF  M   ++
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HV 495

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R       +V  AL+D+Y KCG    A A
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F + +E+ V +WN+M+ G+  HGLG  A+ LFN+M+E    P+++TF+  + ACS +G+
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G   F  + + + I P + HY  MVDLL R G+L EA++ I +MPI+P   V+GA+L
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
             C+IH++VELGE AA  + EL+P++  YHVLL ++Y  A  W ++A+VR  M +KGL++
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ 737
             GCS VE+K   H+F +    HPQ K I   L  + + +KA G+ P   S+ D E   +
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP-VESLEDKE-VSE 793

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           +++L  HSE+LA+AFGL+N++PG+TI + KN   C  CH   K IS +  REI VRD  +
Sbjct: 794 DDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQ 853

Query: 798 FHCFKNGVCSCGD 810
            HCFK+G CSCGD
Sbjct: 854 LHCFKDGDCSCGD 866



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 1/354 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +  A++ M  + G +  A  VF  M  R+V SWN M+  Y + G  EEA+ ++ +ML 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+ P   T    L  C  + D   G  VH  + +   G +V + N+L++MY+KC  +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  +     +SWNAMI G+ +N      L  F  M    ++P+  T+ SV  A   
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS + +AK +H   ++  F  +V    +LI MY   G +G A  +F  M  +   +W  M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G    A+E++  M      P+D+T   A++AC+  G ++ GI     L ++ G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK-LHELAQNKG 429

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               +    A++++  ++  +++A +  + M  +  ++    + G C  H++ E
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 3/354 (0%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K G      F   L+ ++     + DA ++F  +  K    +  M+ GY K    D A+
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                M   +V+P        L  C  +G +  G ++H      GF   +     ++ MY
Sbjct: 385 EVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AK   I++A ++F  M E+D+VSW++++AGF  N  +  AL     M     + + +T +
Sbjct: 445 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFI 503

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           + L A A  G+LR GK +H Y +R G  S   V  AL+D+Y KCG+   A   F     +
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FV 362
           +VVSWN M++ +V  G  + A+ +F +M++ G  P  VT +  L AC+  G + +G    
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILG 415
           H + ++  +  ++     ++ + S+  K+  A ++ +++  K   + W A++ G
Sbjct: 624 HMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/771 (35%), Positives = 441/771 (57%), Gaps = 4/771 (0%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT  K   + R I   + K   C +      L++L+  + S   A RVF  +    
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ G+A+    + A+     M+   + P       LL  C  VG++++GK++H 
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L+  G S D      ++++Y KCG IE A+ +F+     ++V WN ++  + Q      
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           + ++  +M   G   +  T   IL      G + +G+ +H  +++ GF+S + VS  L+D
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+K   ++ AR + + ++ R+VVSW SMIA YV+    EEA+  F++M D GV P N+ 
Sbjct: 390 MYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  A  ACA +  + +G+ +H  +       D+S+ N+L+++Y++C + + A  +F ++ 
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  ++WN +I G+ Q+    +AL  F KM     K + FT +S I ALA L+ I+  K 
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H   +++       V  ALI +Y KCG++  A+ +F  M+ R+  +WN +I     HG 
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++LF++M +   KPND+TF+  ++ACSH GLVEEG+ YF S+   YG+ P+ DHY 
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L+ A  F+ +MPI     ++  +L ACK+HKN+E+GE AA  L EL+P 
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N YA    W    +VR +M+ +G++K PG S +E+KN VH+F+ G   HP 
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809

Query: 703 SKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S +IY FL  L D +   GY  +  N  H+ E   ++     HSEKLA+AFGL+   P  
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCI 869

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLRVC DCH+  K+ S VT REI++RD++RFH F +G CSCGDYW
Sbjct: 870 PLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 279/559 (49%), Gaps = 6/559 (1%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           GL    L    L+ L+ K   +  A +VF+ +  +    +  ML GYA+     +A    
Sbjct: 73  GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY 132

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
            +M +  V P  Y  + +L  C       +G+ IH Q+    F  + F    ++ +Y   
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G  + A ++F  M   D V++NT+++G AQ G  E AL +   M   G R D +T+ S+L
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252

Query: 247 PAVANVGSLRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            A A+VG L+ GK +H Y ++AG  FD I   S  L+D+Y KCG +ETA  +F+     N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGS--LLDLYVKCGDIETAHDIFNLGDRTN 310

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VV WN M+ AY +  +  ++  IF +M   G+ P   T    L  C   G +E G  +H 
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHS 370

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L  +    +D+ ++  LI MYSK + +D+A  I   L+ + +VSW +MI GY Q+    E
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEE 430

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M+   + PD+  + S   A A +  +R    IHA V  S +  ++ +   L++
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVN 490

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +YA+CG    A +LF  ++ +   TWN +I G+G   L + A+ +F KM +   K N  T
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+ AISA ++   +++G        K  G     +   A++ L G+ G + +A     +M
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEM 609

Query: 605 PIEPGITVFGAMLGACKIH 623
            +   ++ +  ++ +C  H
Sbjct: 610 SLRNEVS-WNTIITSCSQH 627



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 263/559 (47%), Gaps = 24/559 (4%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           EIH   +V G   D      ++++YAK G + +A ++F  +  RD VSW  +++G+AQ G
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A  L ++MH          + S+L A         G+ +H    +  F S   V  
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+ +Y   G  + A  VF  M   + V++N++I+ + + G+ E A++IF +M   G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT+   L ACA +GDL++G  +H  L +  +  D     SL+ +Y KC  ++ A DIF
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           +      +V WN M++ Y Q   + ++   F +M++  I P+ FT   ++        I 
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + IH+L I++ FE +++V   LIDMY+K   +  AR + +M+ +R V +W  MI GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-----YFTSLKKDYG 573
            H   + A+  F +M +    P++I    A SAC+    + +G+      Y +    D  
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I      +  +V+L  R GR  EA+   +++  +  IT  G + G         L E+A 
Sbjct: 484 I------WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISG----FGQSRLYEQAL 533

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ----KTPGCSLVELKNE 689
               ++      Y     N++   S    LA +  I + K +     KT   S  E+ N 
Sbjct: 534 MVFMKMSQAGAKY-----NVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588

Query: 690 VHSFYSGSTKHPQSKRIYT 708
           + S Y        +K I++
Sbjct: 589 LISLYGKCGSIEDAKMIFS 607


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/712 (39%), Positives = 418/712 (58%), Gaps = 37/712 (5%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEA 192
           +P  +    LL+ C  + ++   +++H Q I  G + +      V+      + G  + A
Sbjct: 15  SPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 71

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            ++FD +PE +L  WNT++ G+++  F +L + L   M   G + D  T   +       
Sbjct: 72  RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            +L  G+ +HG+ ++ G    V V TALV MY  CG+++TAR VFD     +V++WN +I
Sbjct: 132 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           +AY + G  EE+ R+F  M D+ V PT VT++  L AC+ L DL  G  VH  +   K+ 
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIF-------------------------------SKL 401
           +++ + N++I MY+ C ++D A  IF                                K+
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K  VSW AMI GY ++ R  EAL  F  M++ N+KPD FTMVSV+ A A L  +   +
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 371

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           WI   + R+  + ++FV  ALIDMY KCG V  A ++F  M++R   TW  MI G   +G
Sbjct: 372 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 431

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G+ A+++F+ ML+    P++IT++  +SAC+H+GLV++G  YF  +   +GIEP + HY
Sbjct: 432 HGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHY 491

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G +VDLL RAGRL EA++ I+ MPI+    V+GA+L  C++++  ++ E    ++ EL+P
Sbjct: 492 GCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEP 551

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           D G  +VLL NIYAA   W+ L ++R +M  KG++KTPGCSL+E+   VH F +G   HP
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHP 611

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q+K I   L+ +  ++K AGY PD + +  D+ +  +EN +  HSEKLAIAFGL+NS PG
Sbjct: 612 QTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPG 671

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI I KNLR+C DCHN  K +S V  RE+IVRD  RFH FK+G+CSC DYW
Sbjct: 672 VTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 265/547 (48%), Gaps = 36/547 (6%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC--KYNSLSDAARVFEPI 98
           HP   LLE C S+ +L+++    IK GL    + Q ++++  C  +Y     A R+F+ I
Sbjct: 19  HPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEI 78

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           P+    +++TM++GY++       VS  + M    V P  Y + +L K       +  G+
Sbjct: 79  PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGR 138

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++HG ++ +G   ++F  T +V MY  CGQ++ A  +FD  P+ D+++WN I++ + + G
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 198

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             E +  L   M ++      +T+V +L A + +  LR GK VH Y      +S + +  
Sbjct: 199 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 258

Query: 279 ALVDMYAKC-------------------------------GRVETARLVFDGMKSRNVVS 307
           A++DMYA C                               G ++ AR  FD M  ++ VS
Sbjct: 259 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVS 318

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           W +MI  Y+     +EA+ +F+ M    V+P   T++  L ACA LG LE G ++   +D
Sbjct: 319 WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYID 378

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           + K+  D+ + N+LI MY KC  VD+A  IF ++  +   +W AMI+G A NG   +AL+
Sbjct: 379 RNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 438

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMY 486
            F  M   +I PD  T + V+ A     ++ +  K+   +  +   E N+     L+D+ 
Sbjct: 439 MFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLL 498

Query: 487 AKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDIT 544
           A+ G +  A  + + M  + +   W  ++ G   +     A  +  ++LE  P       
Sbjct: 499 ARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYV 558

Query: 545 FLCAISA 551
            LC I A
Sbjct: 559 LLCNIYA 565



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 14/290 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +VS F     +  A   F+ +P+K    +  M+ GY +     +A+     M+  +V 
Sbjct: 289 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  +G +  G+ I   +  N    DLF    +++MY KCG +++A  +
Sbjct: 349 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 408

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  M +RD  +W  ++ G A NG  E ALD+ + M +     D IT + +L A  + G +
Sbjct: 409 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 468

Query: 256 RIGKAVHGYAMRA----GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNS 310
             G+    Y +R     G +  +     LVD+ A+ GR++ A  V + M  + N + W +
Sbjct: 469 DKGRK---YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGA 525

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDL 356
           ++A        + A  + +++L+  +EP N    V +     AC    DL
Sbjct: 526 LLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKRWNDL 573


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 285/751 (37%), Positives = 431/751 (57%), Gaps = 43/751 (5%)

Query: 97  PIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           P+P +   L +H  +K   +  ++    S L        +P  +    LL+ C  + ++ 
Sbjct: 2   PVPVRFRTLLHHRHVKKPKQMTTIAATSSAL-----KSFSPPTHPLISLLETCESMDQL- 55

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
             +++H Q I  G + +      V+      + G  + A ++FD +PE +L  WNT++ G
Sbjct: 56  --QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRG 113

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +++  F +L + L   M   G + D  T   +        +L  G+ +HG+ ++ G    
Sbjct: 114 YSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYN 173

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V TALV MY  CG+++TAR VFD     +V++WN +I+AY + G  EE+ R+F  M D
Sbjct: 174 VFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMED 233

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           + V PT VT++  L AC+ L DL  G  VH  +   K+ +++ + N++I MY+ C ++D 
Sbjct: 234 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 293

Query: 394 AADIF-------------------------------SKLQGKTLVSWNAMILGYAQNGRV 422
           A  IF                                K+  K  VSW AMI GY ++ R 
Sbjct: 294 ALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRF 353

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EAL  F  M++ N+KPD FTMVSV+ A A L  +   +WI   + R+  + ++FV  AL
Sbjct: 354 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 413

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMY KCG V  A ++F  M++R   TW  MI G   +G G+ A+++F+ ML+    P++
Sbjct: 414 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 473

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           IT++  +SAC+H+GLV++G  YF  +   +GIEP + HYG +VDLL RAGRL EA++ I+
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 533

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            MPI+    V+GA+L  C++++  ++ E    ++ EL+PD G  +VLL NIYAA   W+ 
Sbjct: 534 NMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWND 593

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           L ++R +M  KG++K PGCSL+E+   VH F +G   HPQ+K I   L+ +  ++K AGY
Sbjct: 594 LRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGY 653

Query: 723 VPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
            PD + +  D+ +  +EN +  HSEKLAIAFGL+NS PG TI I KNLR+C DCHN  K 
Sbjct: 654 SPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKL 713

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +S V  RE+IVRD  RFH FK+G+CSC DYW
Sbjct: 714 VSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 265/547 (48%), Gaps = 36/547 (6%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC--KYNSLSDAARVFEPI 98
           HP   LLE C S+ +L+++    IK GL    + Q ++++  C  +Y     A R+F+ I
Sbjct: 40  HPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEI 99

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           P+    +++TM++GY++       VS  + M    V P  Y + +L K       +  G+
Sbjct: 100 PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGR 159

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++HG ++ +G   ++F  T +V MY  CGQ++ A  +FD  P+ D+++WN I++ + + G
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 219

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             E +  L   M ++      +T+V +L A + +  LR GK VH Y      +S + +  
Sbjct: 220 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 279

Query: 279 ALVDMYAKC-------------------------------GRVETARLVFDGMKSRNVVS 307
           A++DMYA C                               G ++ AR  FD M  ++ VS
Sbjct: 280 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVS 339

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           W +MI  Y+     +EA+ +F+ M    V+P   T++  L ACA LG LE G ++   +D
Sbjct: 340 WTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYID 399

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           + K+  D+ + N+LI MY KC  VD+A  IF ++  +   +W AMI+G A NG   +AL+
Sbjct: 400 RNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 459

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMY 486
            F  M   +I PD  T + V+ A     ++ +  K+   +  +   E N+     L+D+ 
Sbjct: 460 MFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLL 519

Query: 487 AKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDIT 544
           A+ G +  A  + + M  + +   W  ++ G   +     A  +  ++LE  P       
Sbjct: 520 ARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYV 579

Query: 545 FLCAISA 551
            LC I A
Sbjct: 580 LLCNIYA 586



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 14/290 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +VS F     +  A   F+ +P+K    +  M+ GY +     +A+     M+  +V 
Sbjct: 310 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  +G +  G+ I   +  N    DLF    +++MY KCG +++A  +
Sbjct: 370 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 429

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  M +RD  +W  ++ G A NG  E ALD+ + M +     D IT + +L A  + G +
Sbjct: 430 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 489

Query: 256 RIGKAVHGYAMRA----GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNS 310
             G+    Y +R     G +  +     LVD+ A+ GR++ A  V + M  + N + W +
Sbjct: 490 DKGRK---YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGA 546

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDL 356
           ++A        + A  + +++L+  +EP N    V +     AC    DL
Sbjct: 547 LLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAACKRWNDL 594


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/750 (36%), Positives = 447/750 (59%), Gaps = 4/750 (0%)

Query: 64   IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA-LYHTMLKGYAKFASLDDA 122
            ++SG+ D  L  +KLV ++ K   ++ A RVF+ +  K +  +++ ++ GYAK    +++
Sbjct: 343  VQSGIDDAAL-GSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401

Query: 123  VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            +S  ++M    +AP  +  + LLK    +   R G   HG ++  GF         +++ 
Sbjct: 402  LSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISF 461

Query: 183  YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
            YAK   I +A  +F+RMP +D +SWN++++G + NG    A++L  RM  +G+  D +T+
Sbjct: 462  YAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTL 521

Query: 243  VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            +S+LPA A       G+ VHGY+++ G     +++ AL+DMY+ C   ++   +F  M  
Sbjct: 522  LSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQ 581

Query: 303  RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            +NVVSW +MI +Y+  G  ++   + Q+M+  G+ P    +  ALHA A    L++G  V
Sbjct: 582  KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSV 641

Query: 363  HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
            H    +  +   + + N+L+ MY KC+ V+ A  IF ++  K ++SWN +I GY++N   
Sbjct: 642  HGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFP 701

Query: 423  NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            NE+ + F  M  +  +P++ TM  ++PA A +S +   + IHA  +R  F ++ +   AL
Sbjct: 702  NESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNAL 760

Query: 483  IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
            +DMY KCGA+  AR LFD + ++++ +W +MI GYG HG GK A+ LF +M     +P+ 
Sbjct: 761  VDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDA 820

Query: 543  ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
             +F   + AC HSGL  EG  +F +++K+Y IEP + HY  +VDLL R G L EA +FI+
Sbjct: 821  ASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIE 880

Query: 603  KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
             MPIEP  +++ ++L  C+IHKNV+L EK A+++F+L+P+  GY+VLLANIYA A  W+ 
Sbjct: 881  SMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEA 940

Query: 663  LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
            + K++  +  +GL++  G S +E++++VH F + +  HP   RI  FL+ +   ++  G+
Sbjct: 941  VKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGH 1000

Query: 723  VPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
             P    ++   +D V +  L  HS KLA+AFG+LN   G  I + KN +VC  CH A K+
Sbjct: 1001 DPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKF 1060

Query: 782  ISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            IS +  REII+RD  RFH F+ G CSC  Y
Sbjct: 1061 ISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 280/536 (52%), Gaps = 18/536 (3%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLD--ALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +LV  + K   L +A  VF+ +P +     ++ +++  YAK     +AVS   +M+   V
Sbjct: 141 RLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGV 200

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           +P  +  + +LK    +G +  G+ IHG L   G          ++ +Y++CG++E+A +
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD M  RD +SWN+++ G   NG+   A+DL ++M  +G     +T++S+LPA A +G 
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320

Query: 255 LRIGKAVHGYAMRA----GFDSIVN------VSTALVDMYAKCGRVETARLVFDGMKSR- 303
             IGKAVHGY++++    G DS+ +      + + LV MY KCG + +AR VFD M S+ 
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           NV  WN ++  Y + G  EE++ +F +M + G+ P    I   L     L     G+  H
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
             + +L  G   ++ N+LIS Y+K   +  A  +F+++  +  +SWN++I G + NG  +
Sbjct: 441 GYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNS 500

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EA+  F +M ++  + DS T++SV+PA A+       + +H   +++       +  AL+
Sbjct: 501 EAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALL 560

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMY+ C    +   +F  M +++V +W  MI  Y   GL      L  +M+    +P+  
Sbjct: 561 DMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVF 620

Query: 544 TFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
               A+ A +    +++G  +H +T      G+E ++    A++++  +   + EA
Sbjct: 621 AVTSALHAFAGDESLKQGKSVHGYTIRN---GMEKLLPVANALMEMYVKCRNVEEA 673



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 264/558 (47%), Gaps = 21/558 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL E   I  L+ K GL         L++++ +   + DAARVF+ +  +    +++M+ 
Sbjct: 219 SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIG 278

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G         AV    +M              +L  C  +G    GK +HG  + +G   
Sbjct: 279 GCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLW 338

Query: 172 DLFAM----------TGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAGFAQNGFA 220
            L ++          + +V MY KCG +  A ++FD M  +  V  WN I+ G+A+ G  
Sbjct: 339 GLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEF 398

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E +L L  +MHE G   D   I  +L  +  +   R G   HGY ++ GF +   V  AL
Sbjct: 399 EESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNAL 458

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +  YAK   +  A LVF+ M  ++ +SWNS+I+     G   EA+ +F +M  QG E  +
Sbjct: 459 ISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDS 518

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VT++  L ACA       G  VH    +  L  + S+ N+L+ MYS C        IF  
Sbjct: 519 VTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRS 578

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K +VSW AMI  Y + G  ++      +M    I+PD F + S + A A    ++  
Sbjct: 579 MGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQG 638

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H   IR+  EK + V  AL++MY KC  V  AR +FD +  + V +WN +I GY  +
Sbjct: 639 KSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRN 698

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
                +  LF+ ML    +PN +T  C + A +    +E G  IH + +L++ +    + 
Sbjct: 699 NFPNESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGREIHAY-ALRRGF----LE 752

Query: 579 DHYG--AMVDLLGRAGRL 594
           D Y   A+VD+  + G L
Sbjct: 753 DSYASNALVDMYVKCGAL 770



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 236/500 (47%), Gaps = 6/500 (1%)

Query: 41  HPSALLLEVCTSLKELRRIL---PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H  + LL+  T L   R  L     I+K G   Q      L+S + K N + DA  VF  
Sbjct: 418 HAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNR 477

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +P +    +++++ G +      +A+   IRM              +L  C        G
Sbjct: 478 MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +HG  +  G   +      +++MY+ C   +   ++F  M ++++VSW  ++  + + 
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  +    L+  M  +G R D   + S L A A   SL+ GK+VHGY +R G + ++ V+
Sbjct: 598 GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            AL++MY KC  VE ARL+FD + +++V+SWN++I  Y     P E+  +F  ML Q   
Sbjct: 658 NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FR 716

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VT+   L A A +  LERG  +H    +     D   +N+L+ MY KC  +  A  +
Sbjct: 717 PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F +L  K L+SW  MI GY  +G    A+  F +MR   I+PD+ +  +++ A     + 
Sbjct: 777 FDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLA 836

Query: 458 RYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
               ++  A+      E  +   T ++D+ ++ G +  A    + M  E   + W  ++ 
Sbjct: 837 AEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLH 896

Query: 516 GYGTHGLGKAAVELFNKMLE 535
           G   H   K A ++ +K+ +
Sbjct: 897 GCRIHKNVKLAEKVADKVFK 916


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/687 (40%), Positives = 418/687 (60%), Gaps = 3/687 (0%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M  + V   V  +  +L    D   +R+GK IH  +  +  SLD+F  T +VN Y KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           + +A K+FD MP R + +WN++++ ++ +  +  A  +  RM  EG R D +T +SIL A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
             N  +L+ GK V        F+  + V TAL+ MYA+C   E A  VF  MK +N+++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           +++I A+ + G+  EA+R F+ M  +G+ P  VT +  L+       LE    +H L+ +
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 369 LKLGTDVSMTNSLISMYSKCK--KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
             L    +M+N+L+++Y +C+  ++D A  I  ++  + + +WN +I GY  +GR  EAL
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             + +++ + I  D  T +SV+ A    + +   K IH+  +    + +V V  AL +MY
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMY 360

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           +KCG++  AR +FD M  R   +WN M+  Y  HG  +  ++L  KM +   K N ITF+
Sbjct: 361 SKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 420

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             +S+CSH+GL+ EG  YF SL  D GIE   +HYG +VDLLGRAG+L EA  +I KMP 
Sbjct: 421 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPS 480

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP I  + ++LGAC++HK+++ G+ AA +L ELDP      V+L+NIY+    W   AK+
Sbjct: 481 EPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKL 540

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R  M  + ++K PG S +++KN+VH F    T HP++  IY  +E L   ++ AGYVPDT
Sbjct: 541 RRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDT 600

Query: 727 NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
             + HDV++  +E+LL+ HSEKLAIAFGL+++   S++HI KNLRVC DCH ATK+IS +
Sbjct: 601 KMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKI 660

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TGREI+VRD HRFH F++G CSC DYW
Sbjct: 661 TGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 217/449 (48%), Gaps = 4/449 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV+ + K  SL+DA +VF+ +P +    +++M+  Y+      +A     RM+++   
Sbjct: 49  TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGER 108

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                +  +L  C +   ++ GK +   +    F LDLF  T ++ MYA+C   E A ++
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F RM +++L++W+ I+  FA +G    AL     M +EG   + +T +S+L        L
Sbjct: 169 FGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 228

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC--GRVETARLVFDGMKSRNVVSWNSMIA 313
                +H      G D    +S ALV++Y +C  G ++ A ++   M  + + +WN +I 
Sbjct: 229 EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLIN 288

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y   G   EA+  +Q++  + +    VT +  L+AC     L  G  +H    +  L +
Sbjct: 289 GYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDS 348

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV + N+L +MYSKC  ++ A  IF  +  ++ VSWN M+  YAQ+G   E L    KM 
Sbjct: 349 DVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKME 408

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
            + +K +  T VSV+ + +   +I    ++ H+L      E        L+D+  + G +
Sbjct: 409 QEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 468

Query: 493 GTA-RALFDMMNERHVTTWNVMIDGYGTH 520
             A + +  M +E  + TW  ++     H
Sbjct: 469 QEAEKYISKMPSEPEIVTWASLLGACRVH 497



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           TSL E + I    ++ GL    + +  L +++ K  S+ +A R+F+ +P +    ++ ML
Sbjct: 329 TSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGML 388

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVNGF 169
           + YA+    ++ +  + +M  + V      +  +L  C   G I  G +  H      G 
Sbjct: 389 QAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGI 448

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
            +       +V++  + G+++EA K   +MP E ++V+W +++  
Sbjct: 449 EVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/814 (36%), Positives = 465/814 (57%), Gaps = 39/814 (4%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGL-CDQHLFQ-TKLVSLFCKYNSLS--DAAR 93
           I R+ S+ LL  C +LKEL+++   ++K GL C +      KL++   +  +L   D AR
Sbjct: 23  ITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYAR 82

Query: 94  -VFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
             F      + +L  Y+ +++GYA     D A+   ++M    + P  Y + +LL  C  
Sbjct: 83  NAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSK 142

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +  +  G ++HG ++  G   D+F    +++ YA+CG+++   K+FD M ER++VSW ++
Sbjct: 143 ILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSL 202

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + G++    ++ A+ L  +M E G   + +T+V ++ A A +  L +GK V  Y    G 
Sbjct: 203 INGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGM 262

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           +    +  ALVDMY KCG +  AR +FD   ++N+V +N++++ YV      + + I  +
Sbjct: 263 ELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDE 322

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML +G  P  VT++  + ACA LGDL  G   H  + +  L    +++N++I MY KC K
Sbjct: 323 MLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGK 382

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN--------------------------- 423
            + A  +F  +  KT+V+WN++I G  ++G +                            
Sbjct: 383 REAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQV 442

Query: 424 ----EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
               EA+  F +M+++ I  D  TMV +  A   L  +  AKW+   + ++    ++ + 
Sbjct: 443 SMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLG 502

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TAL+DM+++CG   +A  +F  M +R V+ W   I      G  + A+ELFN+MLE   K
Sbjct: 503 TALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+D+ F+  ++ACSH G V++G   F S++K +GI P + HYG MVDLLGRAG L EA D
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            IQ MPIEP   V+G++L AC+ HKNVEL   AA +L +L P+  G HVLL+NIYA+A  
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGK 682

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  +A+VR  M++KG+QK PG S +E++  +H F SG   H ++  I   LE +   +  
Sbjct: 683 WTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSE 742

Query: 720 AGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AGYVPD TN + DV++  +E+LLS HSEKLA+A+GL+ +  G  I + KNLR+C DCH+ 
Sbjct: 743 AGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSF 802

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K +S +  REI VRD +R+H FK G CSC DYW
Sbjct: 803 AKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/753 (36%), Positives = 445/753 (59%), Gaps = 2/753 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLD 120
           L + +GL         LV+++  +  + +A  VF+    + + + ++ ++  Y K     
Sbjct: 125 LAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCS 184

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            AV     M +  V P  + ++ ++  C    ++  G+++H  +I  G+  D+F    +V
Sbjct: 185 HAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY+K G I  A  +F ++PE D+VSWN  ++G   +G  + AL+L+ +M   G   +  
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVF 304

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+ SIL A A  G+  +G+ +HG+ ++A  DS   ++  LVDMYAK G ++ A+ VFD +
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R++V WN++I+    G    EA+ +F +M  +G +    T+   L + A L  +    
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH L ++L   +D  + N LI  Y KC  ++ A  +F K     ++++ +MI   +Q  
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD 484

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +A+  F +M  K + PD F + S++ A A LS     K +HA +I+  F  +VF   
Sbjct: 485 HGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGN 544

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+  YAKCG++  A   F  + E+ V +W+ MI G   HG GK A+++F++M++    P
Sbjct: 545 ALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISP 604

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N IT    + AC+H+GLV+E   YF S+K+ +GIE   +HY  M+DLLGRAG+L++A + 
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMEL 664

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           +  MP +    V+GA+L A ++H++ ELG  AA +LF L+P++ G HVLLAN YA+A MW
Sbjct: 665 VNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMW 724

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           D +AKVR +M+   ++K P  S VELK++VH+F  G   HP+++ IY  L+ L D +  A
Sbjct: 725 DDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKA 784

Query: 721 GYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVP+    +HDV+   +E LLS HSE+LA+AF L+++  G+ I ++KNLR+C DCH A 
Sbjct: 785 GYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAF 844

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+IS +  REII+RD++RFH F++G CSC DYW
Sbjct: 845 KFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 258/492 (52%), Gaps = 10/492 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDK 101
           ++  CT  ++L   R++  ++I++G  D+ +F    LV ++ K   +  AA VF  +P+ 
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGY-DKDVFTANALVDMYSKLGDIRMAAVVFGKVPET 266

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               ++  + G         A+  L++M+   + P V+  + +LK C   G    G++IH
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIH 326

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G ++      D +   G+V+MYAK G +++A K+FD +P+RDLV WN +++G +      
Sbjct: 327 GFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHA 386

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L  RM +EG   +  T+ ++L + A++ ++   + VH  A + GF S  +V   L+
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLI 446

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           D Y KC  +  A  VF+   S +++++ SMI A  +  + E+A+++F +ML +G++P   
Sbjct: 447 DSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPF 506

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +   L+ACA L   E+G  VH  L + +  +DV   N+L+  Y+KC  ++ A   FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGL 566

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +VSW+AMI G AQ+G    AL+ F +M  ++I P+  TM SV+ A     ++  AK
Sbjct: 567 PEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK 626

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            + +++      E+       +ID+  + G +  A  L + M  + +   W  ++     
Sbjct: 627 RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRV 686

Query: 520 H---GLGKAAVE 528
           H    LG+ A E
Sbjct: 687 HRDPELGRLAAE 698



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 263/573 (45%), Gaps = 8/573 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL +   I   ++KSGL    +F+  L+S + K      A RVF+ IPD     + +++ 
Sbjct: 19  SLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y+  A   DA+     MR   V    +    +LK   D G    G ++H   +  G   
Sbjct: 77  AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGG 133

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
           D+F    +V MY   G ++EA  +FD    ER+ VSWN +++ + +N     A+ +   M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
              G + +      ++ A      L  G+ VH   +R G+D  V  + ALVDMY+K G +
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
             A +VF  +   +VVSWN+ I+  V  G+ + A+ +  +M   G+ P   T+   L AC
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A  G    G  +H  + +    +D  +   L+ MY+K   +D A  +F  +  + LV WN
Sbjct: 314 AGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWN 373

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           A+I G +   +  EAL+ FC+MR +    +  T+ +V+ + A L  I   + +HAL  + 
Sbjct: 374 ALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
            F  +  V+  LID Y KC  +  A  +F+      +  +  MI        G+ A++LF
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
            +ML     P+       ++AC+     E+G      L K   +  V     A+V    +
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG-NALVYTYAK 552

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            G + +A      +P E G+  + AM+G    H
Sbjct: 553 CGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQH 584



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 247/527 (46%), Gaps = 23/527 (4%)

Query: 156 RGKEIHGQLIVNGFSLDLFAM--TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +G  IH  L+ +G    LFA+    +++ Y+KC     A ++FD +P+   VSW+++V  
Sbjct: 22  QGAHIHAHLLKSG----LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTA 77

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           ++ N     AL     M     R +   +  +L    + G    G  +H  AM  G    
Sbjct: 78  YSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGGD 134

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           + V+ ALV MY   G V+ AR+VFD     RN VSWN +++AYV+      A+++F +M+
Sbjct: 135 IFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMV 194

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             GV+P        ++AC    DLE G  VH ++ +     DV   N+L+ MYSK   + 
Sbjct: 195 WGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIR 254

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            AA +F K+    +VSWNA I G   +G    AL    +M+S  + P+ FT+ S++ A A
Sbjct: 255 MAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
                   + IH  ++++  + + ++   L+DMYAK G +  A+ +FD + +R +  WN 
Sbjct: 315 GSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNA 374

Query: 513 MIDGYGTHGLGKA-AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
           +I G  +HG   A A+ LF +M +     N  T L A+   + S           +L + 
Sbjct: 375 LISGC-SHGAQHAEALSLFCRMRKEGFDVNRTT-LAAVLKSTASLEAISDTRQVHALAEK 432

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
            G          ++D   +   LN A+   +K      I  F +M+ A       + GE 
Sbjct: 433 LGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG-SYDIIAFTSMITAL---SQCDHGED 488

Query: 632 AANRLFE-----LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           A     E     LDPD      LL N  A+ S +++  +V   + K+
Sbjct: 489 AIKLFMEMLRKGLDPDPFVLSSLL-NACASLSAYEQGKQVHAHLIKR 534



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 181/385 (47%), Gaps = 16/385 (4%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI  +L   A   SL  G  +H + +++G  ++      L+  Y+KC    +AR VFD +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEI 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY     P +A+  F+ M    V      +   L    D G    G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGT 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQN 419
            +H L     LG D+ + N+L++MY     VD A  +F +    +  VSWN ++  Y +N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R + A+  F +M    ++P+ F    V+ A      +   + +HA+VIR+ ++K+VF  
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY+K G +  A  +F  + E  V +WN  I G   HG  + A+EL  +M      
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA--MVDLLGRAGRLN 595
           PN  T    + AC+ SG    G  IH F             D+Y A  +VD+  + G L+
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFM-----VKANADSDNYIAFGLVDMYAKHGLLD 355

Query: 596 EAWDFIQKMPIEPGITVFGAMLGAC 620
           +A      +P +  + ++ A++  C
Sbjct: 356 DAKKVFDWIP-QRDLVLWNALISGC 379


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/740 (38%), Positives = 433/740 (58%), Gaps = 7/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++ K++S+ D  +VFE +P +    + ++L GY +  +L D +    RMR + V 
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVW 202

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  +L V    G +  G+ +H Q +  G    +F    ++NMYAKCG +EEA  +
Sbjct: 203 PNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 262

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  M  RD+VSWNT++AG   NG    AL L              T  +++   AN+  L
Sbjct: 263 FCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQL 322

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
            + + +H   ++ GF S  NV TAL+D Y+K G++  A  +F  M  S+NVVSW +MI  
Sbjct: 323 GLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMING 382

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            ++ G+   A  +F +M + GV P + T    L   A +  L   I    +    +  + 
Sbjct: 383 CIQNGDVPLAAALFSRMREDGVAPNDFTYSTIL--TASVASLPPQIHAQVIKTNYECTSI 440

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V    +L++ YSK    + A  IF  +  K +VSW+AM+  YAQ G  + A N F KM  
Sbjct: 441 VG--TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTM 498

Query: 435 KNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
             +KP+ FT+ SVI A A  +  +   +  HA+ I+      + V +AL+ MYA+ G++ 
Sbjct: 499 HGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIE 558

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +A+ +F+   +R + +WN M+ GY  HG  + A+++F +M     + + +TFL  I  C+
Sbjct: 559 SAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCA 618

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLVEEG  YF S+ +DYGI P M+HY  MVDL  RAG+L+EA   I+ M    G  V+
Sbjct: 619 HAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVW 678

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +LGACK+HKNVELG+ AA +L  L+P +   +VLL+NIY+AA  W +  +VR +M+ K
Sbjct: 679 RTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
            ++K  GCS +++KN+VHSF +    HP S++IY  L  +  ++K  GY PDT+ ++H+V
Sbjct: 739 KVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEV 798

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  +E +L+ HSE+LA+AFGL+ + PG+ +HI KNLRVCGDCH   K +S +  REI++
Sbjct: 799 AEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVM 858

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F +GVCSCGD+W
Sbjct: 859 RDCSRFHHFNSGVCSCGDFW 878



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 262/515 (50%), Gaps = 9/515 (1%)

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYL 144
           N  + A + F+ IP + + L H +   +A+  S+  A+  FL   R             +
Sbjct: 52  NDATGARQAFDEIPHR-NTLDHALFD-HARRGSVHQALDHFLDVHRCHGGRVGGGALVGV 109

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LKVCG V +   GK++HG  I  G    D+   T +V+MY K   + +  K+F+ MP+R+
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRN 169

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +V+W +++ G+ Q+G     ++L  RM  EG   + +T  S+L  VA+ G + +G+ VH 
Sbjct: 170 VVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHA 229

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
            +++ G  S V V  +L++MYAKCG VE AR+VF GM++R++VSWN+++A  V  G+  E
Sbjct: 230 QSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLE 289

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+++F          T  T    +  CA++  L     +H  + +    +  ++  +L+ 
Sbjct: 290 ALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMD 349

Query: 384 MYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            YSK  ++  A DIF  + G + +VSW AMI G  QNG V  A   F +MR   + P+ F
Sbjct: 350 AYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDF 409

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T  +++ A    SV      IHA VI++ +E    V TAL+  Y+K      A ++F M+
Sbjct: 410 TYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMI 465

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           +++ V +W+ M+  Y   G    A  +F KM     KPN+ T    I AC+      +  
Sbjct: 466 DQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLG 525

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             F ++   +     +    A+V +  R G +  A
Sbjct: 526 RQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 233/485 (48%), Gaps = 23/485 (4%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           RR+    +K G C        L++++ K   + +A  VF  +  +    ++T++ G    
Sbjct: 225 RRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLN 284

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               +A+      R          Y  ++K+C ++ ++   +++H  ++  GF      M
Sbjct: 285 GHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVM 344

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
           T +++ Y+K GQ+  A  +F  M   +++VSW  ++ G  QNG   LA  L +RM E+G 
Sbjct: 345 TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGV 404

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             +  T  +IL   A+V SL     +H   ++  ++    V TAL+  Y+K    E A  
Sbjct: 405 APNDFTYSTIL--TASVASLP--PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALS 460

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA---- 351
           +F  +  ++VVSW++M+  Y + G+ + A  IF KM   G++P   TI   + ACA    
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520

Query: 352 --DLGDLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
             DLG     I + H+  D L       ++++L+SMY++   ++ A  IF +   + LVS
Sbjct: 521 GVDLGRQFHAISIKHRCHDAL------CVSSALVSMYARKGSIESAQCIFERQTDRDLVS 574

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           WN+M+ GYAQ+G   +AL+ F +M ++ I+ D  T +SVI   A   ++    ++  ++ 
Sbjct: 575 WNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMA 634

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LG 523
                   +     ++D+Y++ G +  A +L + M+       W  ++     H    LG
Sbjct: 635 RDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELG 694

Query: 524 KAAVE 528
           K A E
Sbjct: 695 KLAAE 699



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 170/357 (47%), Gaps = 11/357 (3%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           +I   +IK+      +  T L++ + K  +  +A  +F+ I  K    +  ML  YA+  
Sbjct: 425 QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 484

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD-VGEIRRGKEIHGQLIVNGFSLDLFAM 176
             D A +  I+M    + P  +  + ++  C      +  G++ H   I +     L   
Sbjct: 485 DSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVS 544

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +V+MYA+ G IE A  +F+R  +RDLVSWN++++G+AQ+G+++ ALD+  +M  EG  
Sbjct: 545 SALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIE 604

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARL 295
            D +T +S++   A+ G +  G+       R  G    +     +VD+Y++ G+++ A  
Sbjct: 605 MDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMS 664

Query: 296 VFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADL 353
           + +GM      + W +++ A     N E      +K+L  +  +     ++  +++ A  
Sbjct: 665 LIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAA-- 722

Query: 354 GDLERGIFVHKLLDQLKLGTD-----VSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           G  +    V KL+D  K+  +     + + N + S  +  K    +  I++KL+  T
Sbjct: 723 GKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMT 779


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/704 (40%), Positives = 419/704 (59%), Gaps = 38/704 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPE 201
           LL  C     +   K+IH Q+I  G     FA++ ++   A    G +  A  +F+ + +
Sbjct: 38  LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +   WNT++ G + +     A+D   RM   G   +  T   +L + A VG+ + GK +
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRV------------------------------- 290
           HG+ ++ G +S   V T+L++MYA+ G +                               
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + AR +F+ +  R+ VSWN+MIA Y + G  EEA+  FQ+M    V P   T++  L AC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A  G LE G +V   ++   LG+++ + N+LI MYSKC  +D+A D+F  +  K ++SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
            MI GY+      EAL  F KM+  N++P+  T VS++PA A L  +   KWIHA + + 
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 471 CFE-KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                N  + T+LIDMYAKCG +  A+ +F  M  + + +WN MI G   HG    A+EL
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F +M +   +P+DITF+  +SACSH+GLVE G   F+S+ +DY I P + HYG M+DLLG
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG  +EA   ++ M ++P   ++G++LGAC++H NVELGE AA  LFEL+P+  G +VL
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYA A  WD +A++RT +  KG++K PGCS +E+ + VH F  G   H QS+ IY  
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKM 634

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L+ +   ++ AG+VPDT+ + +D+++  +E  LS HSEKLAIAFGL+++ P +TI I KN
Sbjct: 635 LDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 694

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVCG+CH+A K IS +  REII RD +RFH FK+G CSC DYW
Sbjct: 695 LRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 186/571 (32%), Positives = 289/571 (50%), Gaps = 64/571 (11%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYR-HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQ 75
           P  TLH         +  P ++ + HPS  LL  C S + L++I   IIK+GL +     
Sbjct: 13  PPPTLH-----FQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFAL 67

Query: 76  TKLVSLFC---KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +KL+  FC    + +LS A  +FE I      +++TM++G +  +S   A+ F +RM   
Sbjct: 68  SKLIE-FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLC 126

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI--- 189
            V P  Y + +LLK C  VG  + GK+IHG ++  G   D F  T ++NMYA+ G++   
Sbjct: 127 GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYA 186

Query: 190 ----------------------------EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
                                       ++A ++F+ +P RD VSWN ++AG+AQ+G  E
Sbjct: 187 ELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFE 246

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL     M       +  T+V++L A A  GSL +G  V  +    G  S + +  AL+
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY+KCG ++ AR +F+G+  ++++SWN MI  Y    + +EA+ +F+KM    VEP +V
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDV 366

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLG-TDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L ACA LG L+ G ++H  +D+  LG T+ S+  SLI MY+KC  ++ A  +F+ 
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K+L SWNAMI G A +G  N AL  F +MR +  +PD  T V V+ A +   ++   
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486

Query: 461 KWIHALVIRSCFEKNV--FVMTA-------LIDMYAKCGAVGTARALFDMMNER-HVTTW 510
                   R CF   V  + ++        +ID+  + G    A AL   M  +     W
Sbjct: 487 --------RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538

Query: 511 NVMIDGYGTHG---LGK-AAVELFNKMLEGP 537
             ++     HG   LG+ AA  LF    E P
Sbjct: 539 GSLLGACRVHGNVELGEFAAKHLFELEPENP 569


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/769 (36%), Positives = 456/769 (59%), Gaps = 35/769 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + +   L+ A  +F  +P +    +++++     F     A+  L  M  +     
Sbjct: 102 LLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLS 161

Query: 138 VYNYTYLLKVCGDVGE-IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYK 194
            +    +L  C  + E +R G+E H   + NGF    + FA   +++MYA+ G +++A  
Sbjct: 162 SFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQM 221

Query: 195 MFDRM-----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           +F  +     P   +V+WNT+V+   Q+G    A++++  M   G R D IT  S LPA 
Sbjct: 222 LFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPAC 281

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKS--RNV 305
           + +  L +G+ +H Y ++   D   N  V++ALVDMYA   RV  AR VFD +    R +
Sbjct: 282 SQLEMLSLGREMHAYVLKDS-DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQL 340

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
             WN+M+  Y + G  EEA+ +F +M  + GV P+  TI   L ACA          VH 
Sbjct: 341 GLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHG 400

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            + +  +  +  + N+L+ +Y++   ++ A  IF+ ++ + +VSWN +I G    G +++
Sbjct: 401 YVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHD 460

Query: 425 ALNYFCKMRSKN------------------IKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           A     +M+ +                   + P++ T+++++P  A L+     K IH  
Sbjct: 461 AFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGY 520

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
            +R   + ++ V +AL+DMYAKCG +  +RA+FD + +R+V TWNV+I  YG HGLG  A
Sbjct: 521 AMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEA 580

Query: 527 VELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           + LF++M +    KPN++TF+ A++ACSHSG+V+ G+  F S+K+++G++P  D +   V
Sbjct: 581 IALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAV 640

Query: 586 DLLGRAGRLNEAWDFIQKM-PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           D+LGRAGRL+EA+  I  M P E  ++ + + LGAC++H+NV LGE AA RLF+L+PDE 
Sbjct: 641 DILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEA 700

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            ++VLL NIY+AA +W+K ++VR  M ++G+ K PGCS +EL   +H F +G + HP+S 
Sbjct: 701 SHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPEST 760

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            ++  ++ L + ++  GY PDT+S+ HD+E+  +  +L  HSEKLAIAFGLL + PG+TI
Sbjct: 761 LVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATI 820

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + KNLRVC DCH A K+IS + GREI++RD+ RFH F +G CSCGDYW
Sbjct: 821 RVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 207/406 (50%), Gaps = 31/406 (7%)

Query: 244 SILPAVANVGSLR---IGKAVHGYAMRA----GFDSIVNVSTALVDMYAKCGRVETARLV 296
           ++ PA  +  +LR     +++HG A+R     GF   V  + AL+  YA+CG +  A  +
Sbjct: 61  ALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAV--ANALLTAYARCGDLTAALAL 118

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG-D 355
           F+ M SR+ V++NS+IAA         A+   + ML +G   ++ T++  L AC+ L  D
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAED 178

Query: 356 LERGIFVH--KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-----GKTLVS 408
           L  G   H   L +    G +    N+L+SMY++   VD A  +F  +      G  +V+
Sbjct: 179 LRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVT 238

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN M+    Q+GR  EA+     M ++ ++PD  T  S +PA ++L ++   + +HA V+
Sbjct: 239 WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298

Query: 469 R-SCFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKA 525
           + S    N FV +AL+DMYA    VG AR +FDM+    R +  WN M+ GY   G+ + 
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEE 358

Query: 526 AVELFNKM-LEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYGIEPVMDHYG 582
           A+ELF +M  E    P++ T    + AC+ S     +E +H +  LK+     P + +  
Sbjct: 359 ALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYV-LKRGMADNPFVQN-- 415

Query: 583 AMVDLLGRAGRLNEA-WDFIQKMPIEP-GITVFGAMLGACKIHKNV 626
           A++DL  R G +  A W F     IEP  +  +  ++  C +  ++
Sbjct: 416 ALMDLYARLGDMEAARWIFAA---IEPRDVVSWNTLITGCVVQGHI 458


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/756 (36%), Positives = 447/756 (59%), Gaps = 5/756 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L +K+G          L++++ K   +  A +VFE + ++    +++++   ++     +
Sbjct: 220 LALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGE 279

Query: 122 AVSFLIRM---RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
                 R+     + + P V     ++  C  VGE+R G  +HG     G + ++     
Sbjct: 280 CCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNS 339

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRG 237
           +V+MY+KCG + EA  +FD    +++VSWNTI+ G+++ G      +L+  M  EE  R 
Sbjct: 340 LVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRV 399

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           + +T++++LPA +    L   K +HGYA R GF     V+ A V  YAKC  ++ A  VF
Sbjct: 400 NEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVF 459

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
            GM+ + V SWN++I A+ + G P +++ +F  M+D G++P   TI   L ACA L  L 
Sbjct: 460 CGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLR 519

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H  + +  L  D  +  SL+S+Y +C  +     IF K++ K+LV WN MI G++
Sbjct: 520 CGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFS 579

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           QN    EAL+ F +M S  IKP    +  V+ A +++S +R  K +H+  +++   ++ F
Sbjct: 580 QNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAF 639

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V  ALIDMYAKCG +  ++ +FD +NE+    WNV+I GYG HG G  A+ELF  M    
Sbjct: 640 VTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKG 699

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +P+  TFL  + AC+H+GLV EG+ Y   ++  YG++P ++HY  +VD+LGRAG+L EA
Sbjct: 700 GRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEA 759

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
              + +MP EP   ++ ++L +C+ + ++E+GE+ + +L EL+P++   +VLL+N+YA  
Sbjct: 760 LKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGL 819

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             WD++ KVR  M++ GL K  GCS +E+   V+ F        +SK+I      L  +I
Sbjct: 820 GKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKI 879

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
              GY PDT+ + H++E+  +  +L SHSEKLAI+FGLLN++ G+T+ + KNLR+C DCH
Sbjct: 880 SKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCH 939

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NA K +S V  R+IIVRD  RFH FKNG+C+CGD+W
Sbjct: 940 NAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 197/633 (31%), Positives = 332/633 (52%), Gaps = 22/633 (3%)

Query: 26  HTLSQRAYIPSR-IYRHPSALLLEVCTSLKEL---RRILPLIIKS-GLCDQHLFQTKLVS 80
           H+ +Q   + S  I +    +LL  C   K +   R++  L+  S  L +  +  T++++
Sbjct: 77  HSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIA 136

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVY 139
           ++    S SD+  VF+   +K   LY+ +L GY++ A   DA+S FL  +   D+AP  +
Sbjct: 137 MYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNF 196

Query: 140 NYTYLLKVCGDVGEIRRGKEIHG-QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
               + K C  V ++  G+ +H   L   GFS D F    ++ MY KCG +E A K+F+ 
Sbjct: 197 TLPCVAKACAGVADVELGEAVHALALKAGGFS-DAFVGNALIAMYGKCGFVESAVKVFET 255

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRM---HEEGRRGDFITIVSILPAVANVGSL 255
           M  R+LVSWN+++   ++NG       +  R+    EEG   D  T+V+++PA A VG +
Sbjct: 256 MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R+G  VHG A + G    V V+ +LVDMY+KCG +  AR +FD    +NVVSWN++I  Y
Sbjct: 316 RMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY 375

Query: 316 VEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            + G+      + Q+M  ++ V    VT++  L AC+    L     +H    +     D
Sbjct: 376 SKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD 435

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             + N+ ++ Y+KC  +D A  +F  ++GKT+ SWNA+I  +AQNG   ++L+ F  M  
Sbjct: 436 ELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMD 495

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             + PD FT+ S++ A A L  +R  K IH  ++R+  E + F+  +L+ +Y +C ++  
Sbjct: 496 SGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLL 555

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
            + +FD M  + +  WNVMI G+  + L   A++ F +ML G  KP +I     + ACS 
Sbjct: 556 GKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615

Query: 555 SGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
              +  G  +H F +LK     +  +    A++D+  + G + ++ +   ++  E    V
Sbjct: 616 VSALRLGKEVHSF-ALKAHLSEDAFVT--CALIDMYAKCGCMEQSQNIFDRVN-EKDEAV 671

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           +  ++    IH +   G KA   LFEL  ++GG
Sbjct: 672 WNVIIAGYGIHGH---GLKAI-ELFELMQNKGG 700



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 3/318 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L  L+ I     + G     L     V+ + K +SL  A RVF  +  K  + ++ ++  
Sbjct: 417 LLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGA 476

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           +A+      ++   + M    + P  +    LL  C  +  +R GKEIHG ++ NG  LD
Sbjct: 477 HAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELD 536

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
            F    ++++Y +C  +     +FD+M  + LV WN ++ GF+QN     ALD   +M  
Sbjct: 537 EFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLS 596

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            G +   I +  +L A + V +LR+GK VH +A++A       V+ AL+DMYAKCG +E 
Sbjct: 597 GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQ 656

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           ++ +FD +  ++   WN +IA Y   G+  +A+ +F+ M ++G  P + T +  L AC  
Sbjct: 657 SQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNH 716

Query: 353 LGDLERGIFVHKLLDQLK 370
            G +  G+   K L Q++
Sbjct: 717 AGLVTEGL---KYLGQMQ 731



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 9/224 (4%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCD 70
           N  P + L   +  LS     P  I       +L  C+ +  LR    +    +K+ L +
Sbjct: 581 NELPCEALDTFRQMLSG-GIKPQEI---AVTGVLGACSQVSALRLGKEVHSFALKAHLSE 636

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
                  L+ ++ K   +  +  +F+ + +K +A+++ ++ GY        A+     M+
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQ 696

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQI 189
                P  + +  +L  C   G +  G +  GQ+  + G    L     VV+M  + GQ+
Sbjct: 697 NKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQL 756

Query: 190 EEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
            EA K+ + MP E D   W+++++     G  E+  ++  ++ E
Sbjct: 757 TEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE 800


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/769 (36%), Positives = 449/769 (58%), Gaps = 9/769 (1%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           +C +L   +++     K GL       + LV L+ K   +  A+++F  +P++ D  ++ 
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L GYA+   +   +     M   DV    +  T +LK C +   +++G+ IH  +I  G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +  + F   G+V+MY+KCG   +A  +F  + + D+V W+ ++    Q G +E ++ L  
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404

Query: 229 RMHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            M    R GD +    TI S+L A  N G+L+ G+++H    + GF++ V VS ALV MY
Sbjct: 405 LM----RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G V     +++ M  R+++SWN+ ++   + G  +  + IF  ML++G  P   T +
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +C+ L D+  G  VH  + + +L  +  +  +LI MY+KC  ++ A   F++L  +
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            L +W  +I  YAQ  +  +ALNYF +M+ + +KP+ FT+   +   + L+ +   + +H
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLH 640

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           ++V +S    ++FV +AL+DMYAKCG +  A ALF+ +  R    WN +I GY  +G G 
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGN 700

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+  F  ML+    P+ +TF   +SACSH GLVEEG  +F S+ +D+GI P +DH   M
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VD+LGR G+ +E  DFIQKM +     ++  +LGA K+H N+ LGEKAAN+LFEL P+E 
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             ++LL+NI+A    WD + +VR++M  KG++K PGCS VE   +VH+F S    HPQ +
Sbjct: 821 SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I+  L+ L  E+ +  YVP T  + H+V +  ++  L  HSE+LA+ F L+++S    I
Sbjct: 881 EIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKI 940

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLR+C DCH+  K+IS +T +EI+VRD+ RFH FKNG CSC D+W
Sbjct: 941 RIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/710 (38%), Positives = 432/710 (60%), Gaps = 7/710 (0%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYD---DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           +K   +  +L +A+ FL R   D   D A        LL+ CG   +I  G+ +H  +  
Sbjct: 74  IKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSA 133

Query: 167 NG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           +  F  D    T ++ MY+ CG   ++  +FD++  ++L  WN IV+ + +N   E A+ 
Sbjct: 134 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 193

Query: 226 LVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           + + +      + D  T+  ++ A A +  L +G+ +HG A +    S V V  AL+ MY
Sbjct: 194 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY 253

Query: 285 AKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
            KCG VE A + VFD M ++ V SWN+++  Y +  +P +A+ ++ +M D G++P   TI
Sbjct: 254 GKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 313

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L AC+ +  L  G  +H    +  L  D  +  SL+S+Y  C K   A  +F  ++ 
Sbjct: 314 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEH 373

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           ++LVSWN MI GY+QNG  +EA+N F +M S  I+P    ++ V  A ++LS +R  K +
Sbjct: 374 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 433

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H   +++   +++FV +++IDMYAK G +G ++ +FD + E+ V +WNV+I GYG HG G
Sbjct: 434 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 493

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           K A+ELF KML    KP+D TF   + ACSH+GLVE+G+ YF  +   + IEP ++HY  
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 553

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           +VD+LGRAGR+++A   I++MP +P   ++ ++L +C+IH N+ LGEK AN+L EL+P++
Sbjct: 554 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 613

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              +VL++N++A +  WD + +VR  M+  GLQK  GCS +E+  +VH+F  G    P+ 
Sbjct: 614 PENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPEL 673

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
           + +      L  +I + GY PDT S+ HD+E+  +  +L  HSEKLAI+FGLLN++ G  
Sbjct: 674 EEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLP 733

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + KNLR+CGDCHNA K+IS V  R+I+VRD  RFH F++G+CSCGDYW
Sbjct: 734 VRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 271/519 (52%), Gaps = 9/519 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            +LL+ C   K++   RR+  ++  S   C+  +  T++++++    S SD+  VF+ + 
Sbjct: 109 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 168

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            K    ++ ++  Y +    +DA+S    +    +  P  +    ++K C  + ++  G+
Sbjct: 169 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 228

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK-MFDRMPERDLVSWNTIVAGFAQN 217
            IHG         D+F    ++ MY KCG +EEA K +FD M  + + SWN ++ G+AQN
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                ALDL  +M + G   D+ TI S+L A + + SL  G+ +HG+A+R G      + 
Sbjct: 289 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +L+ +Y  CG+   A+++FDGM+ R++VSWN MIA Y + G P+EA+ +F++ML  G++
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  + IM    AC+ L  L  G  +H    +  L  D+ +++S+I MY+K   +  +  I
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F +L+ K + SWN +I GY  +GR  EAL  F KM    +KPD FT   ++ A +   ++
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 528

Query: 458 RYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMID 515
               ++ + ++     E  +   T ++DM  + G +  A R + +M  +     W+ ++ 
Sbjct: 529 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588

Query: 516 GYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACS 553
               HG      ++ NK+LE  P KP +   +  + A S
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 627



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 13/317 (4%)

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK- 330
           S+ ++ T +  +       +T  L F    +    S    I    E GN +EA+   Q+ 
Sbjct: 34  SLHSIFTPIASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRE 93

Query: 331 ----MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMY 385
               +LD       + ++  L AC    D+E G  +H+++    +   D  +   +I+MY
Sbjct: 94  SDDVVLDSAQRSEAMGVL--LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMY 151

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTM 444
           S C     +  +F KL+ K L  WNA++  Y +N    +A++ F ++ S    KPD+FT+
Sbjct: 152 SMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTL 211

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMN 503
             VI A A L  +   + IH +  +     +VFV  ALI MY KCG V  A + +FD+M+
Sbjct: 212 PCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMD 271

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG-- 561
            + V++WN ++ GY  +   + A++L+ +M +    P+  T    + ACS    +  G  
Sbjct: 272 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 331

Query: 562 IHYFTSLKKDYGIEPVM 578
           IH F +L+    ++P +
Sbjct: 332 IHGF-ALRNGLAVDPFI 347


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/753 (37%), Positives = 444/753 (58%), Gaps = 5/753 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G       Q  L++ + + NSL DA+++F+ +P      + T+ +GY++      A
Sbjct: 61  ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA 120

Query: 123 VSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           + F++R+  +  +V P V+  T LLK+   +        +H  +   G   D F  T ++
Sbjct: 121 LHFILRIFKEGHEVNPFVF--TTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALI 178

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           + Y+  G ++ A  +FD +  +D+VSW  +VA +A+N F E +L L  +M   G + +  
Sbjct: 179 DAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TI   L +   + +  +GK+VHG A++  +D  + V  AL+++YAK G +  A+ +F+ M
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +++ W+ MIA Y +    +EA+ +F +M    V P N T    L ACA    L+ G 
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +  L ++V ++N+++ +Y+KC +++ +  +F +L  +  V+WN +I+GY Q G
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
               A+N F  M   +++P   T  SV+ A A L+ +     IH+L I++ + K+  V  
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +LIDMYAKCG +  AR  FD MN+R   +WN MI GY  HG+   A+ LF+ M     KP
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKP 538

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TF+  +SACS++GL+ +G  +F S+ KDY I+P ++HY  MV LLGR GR +EA   
Sbjct: 539 NKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKL 598

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I ++  +P + V+ A+LGAC IHK V+LG   A  + E++P +   HVLL+N+YA A  W
Sbjct: 599 IGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRW 658

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           D +A VR  M+KK ++K PG S VE +  VH F  G T HP  K I   LE L  + + A
Sbjct: 659 DNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDA 718

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPD N++  DV+D  +E  L  HSE+LA+A+GL+ +    +I I KNLR+C DCH   
Sbjct: 719 GYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVM 778

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K IS V  REI++RD++RFH F++GVCSCGDYW
Sbjct: 779 KLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 252/469 (53%), Gaps = 6/469 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK +H  ++  G SLDLFA   ++N Y +   +++A K+FD MP+ + +S+ T+  G+++
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +     AL  + R+ +EG   +     ++L  + ++    +   +H    + G  +   V
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TAL+D Y+  G V+ AR VFD +  +++VSW  M+A Y E    EE++++F +M   G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P N TI  AL +C  L     G  VH    +     D+ +  +L+ +Y+K  ++  A  
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++    L+ W+ MI  YAQ+ R  EAL+ F +MR  ++ P++FT  SV+ A A    
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   K IH+ V++     NVFV  A++D+YAKCG +  +  LF+ + +R+  TWN +I G
Sbjct: 354 LDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVG 413

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGI 574
           Y   G G+ A+ LF  MLE   +P ++T+   + A +    +E G  IH  T +K  Y  
Sbjct: 414 YVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT-IKTMYNK 472

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           + V+    +++D+  + GR+N+A     KM     ++ + AM+    +H
Sbjct: 473 DTVV--ANSLIDMYAKCGRINDARLTFDKMNKRDEVS-WNAMICGYSMH 518



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 149/295 (50%), Gaps = 10/295 (3%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           + Q + +P+       A +L+ C S   L   ++I   ++K GL         ++ ++ K
Sbjct: 329 MRQTSVVPNNF---TFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAK 385

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              + ++ ++FE +PD+ D  ++T++ GY +    + A++    M   D+ P    Y+ +
Sbjct: 386 CGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSV 445

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L+    +  +  G +IH   I   ++ D      +++MYAKCG+I +A   FD+M +RD 
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDE 505

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSWN ++ G++ +G +  AL+L   M     + + +T V +L A +N G L  G+A H  
Sbjct: 506 VSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQA-HFE 564

Query: 265 AMRAGFD--SIVNVSTALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYV 316
           +M   +D    +   T +V +  + GR + A +L+ +     +V+ W +++ A V
Sbjct: 565 SMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACV 619


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 269/658 (40%), Positives = 411/658 (62%), Gaps = 3/658 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKC--GQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           +++H  L+     LD      V+   A      I+ A  +F+ + + +  ++N ++ G A
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                + AL L  +MHE+  + D  T  S+L A + + +LR G+ VH   +++GF S   
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V   L+ MYA CG++  AR VFDGM  R++V+WNSM++ Y + G  +E +++F+K+L+  
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           +E  +VT++  L AC  L +LE G  + + +    L  + ++T SLI MY+KC +VD A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F ++  + +V+W+AMI GYAQ  R  EALN F +M+  N+ P+  TMVSV+ + A L 
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                KW+H  + +   +  V + T LID YAKCG +  +  +F  M+ ++V TW  +I 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G   +G GK A+E F+ MLE   KPND+TF+  +SACSH+ LV++G H F S+++D+ IE
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P ++HYG MVD+LGRAG L EA+ FI  MP  P   V+  +L +C+ HKN+E+ EK+   
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEH 517

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           +  L+P   G ++LL+N YA     +   +VR+++++K ++K PGCSL+EL   VH F+S
Sbjct: 518 ITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFS 577

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGL 754
              +H  SK I+  L+ ++ +IK  GYVP+T+    + E+  +E  +S HSEKLAIA+GL
Sbjct: 578 EDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGL 637

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +SP +TI I KNLR+C DCHNATK+IS V  R IIVRD +RFH FK+G+CSC DYW
Sbjct: 638 IRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 278/534 (52%), Gaps = 38/534 (7%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSG-LCDQHLFQTKLVSL-FCKYNSLSDAARVFEPI 98
           +P +L+L+ C + K+L+++   ++K+  L D  + +  L S      +++  A  +F  I
Sbjct: 22  NPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHI 81

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
                + Y+ M++G A   S D+A+    +M    V    + ++ +LK C  +  +R G+
Sbjct: 82  DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGE 141

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  ++ +GF  + F    ++ MYA CGQI  A  +FD MPER +V+WN++++G+ +NG
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNG 201

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             +  + L  ++ E     D +T++S+L A   + +L IG+ +  Y +  G      ++T
Sbjct: 202 LWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTT 261

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +L+DMYAKCG+V+TAR +FD M  R+VV+W++MI+ Y +    +EA+ +F +M    V P
Sbjct: 262 SLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYP 321

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT++  L++CA LG  E G +VH  + + K+   V++   LI  Y+KC  +DR+ ++F
Sbjct: 322 NEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF 381

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  K + +W A+I G A NG    AL +F  M   ++KP+  T + V+ A +   ++ 
Sbjct: 382 KEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVD 441

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + +                              + R  FD+  E  +  +  M+D  G
Sbjct: 442 QGRHL----------------------------FNSMRRDFDI--EPRIEHYGCMVDILG 471

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISAC-SHSG--LVEEGIHYFTSLK 569
             G  + A +  + M   P  PN + +   +++C +H    + E+ + + T L+
Sbjct: 472 RAGFLEEAYQFIDNM---PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLE 522


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 271/674 (40%), Positives = 414/674 (61%), Gaps = 7/674 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LL+   +    ++G+++H  +I   FS+   + +  T +   YA CG + +A  +FD + 
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMI--SFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIV 122

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            ++   WN ++ G+A NG    +L L   M   G+R D  T   +L A  ++  + IG+ 
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR 182

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH   +  G +S + V  +L+ MYAK G + TAR+VFD M  R++ SWN+MI+ Y +  +
Sbjct: 183 VHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNAD 242

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT-DVSMTN 379
              A  +F  M   G+     T++  L ACADL  ++ G  +H    +  +G  +   TN
Sbjct: 243 SGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTN 302

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SLI MY  C  +  A  +F +++ K  VSWN+MILGYA+NG   E+L  F +M      P
Sbjct: 303 SLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGP 362

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  T ++V+ A  +++ +RY   IH+ +++  F+ N  V TAL+DMY+KCG++  +R +F
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M ++ + +W+ M+ GYG HG G+ A+ + + M      P++  F   +SACSH+GLV 
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F  ++K+Y ++P + HY  MVDLLGRAG L+EA+  I+ M I+P   ++ A+L A
Sbjct: 483 EGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
            ++HKN++L E +A ++F+++P     ++ L+NIYAA   WD + +VR ++ +KGL+K+P
Sbjct: 543 SRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSP 602

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           GCS +EL N VH F  G   H Q++ IY  L  L  ++K AGY PDT+ + +DVE+ V+E
Sbjct: 603 GCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKE 662

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +L  HSE+LAIAF L+N+ PG+ I I KNLRVCGDCH  TK IS +TGREII+RD+HRF
Sbjct: 663 KMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRF 722

Query: 799 HCFKNGVCSCGDYW 812
           H F  G CSCGDYW
Sbjct: 723 HHFIKGFCSCGDYW 736



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 215/394 (54%), Gaps = 7/394 (1%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             TKL + +     +S A  +F+ I  K   L++ M++GYA       ++     M    
Sbjct: 97  LNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFG 156

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
                + Y ++LK CGD+  +  G+ +H +++V G   D++    ++ MYAK G +  A 
Sbjct: 157 QRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTAR 216

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +FDRM ERDL SWNT+++G+A+N  +  A  +   M + G   D  T++ +L A A++ 
Sbjct: 217 MVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLK 276

Query: 254 SLRIGKAVHGYAMRAGFDSIVN----VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           +++ GK +HGYA+R   +SI N     + +L++MY  C  +  AR +F+ ++ ++ VSWN
Sbjct: 277 AVKEGKVIHGYAVR---NSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWN 333

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           SMI  Y   G+  E++R+F++M   G  P  VT +  L AC  +  L  G+ +H  L + 
Sbjct: 334 SMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK 393

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               +  +  +L+ MYSKC  +  +  +F ++  K+LVSW+AM+ GY  +GR  EA++  
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL 453

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
             M++ ++ PD+    S++ A +   ++   K I
Sbjct: 454 DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 8/295 (2%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCD-QHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LL  C  LK ++    I    +++ + +    F   L+ ++C  N + DA R+FE +  K
Sbjct: 268 LLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWK 327

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +++M+ GYA+     +++    RM  D   P    +  +L  C  +  +R G  IH
Sbjct: 328 DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIH 387

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             L+  GF  +    T +V+MY+KCG +  + ++FD MP++ LVSW+ +VAG+  +G   
Sbjct: 388 SYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGR 447

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TA 279
            A+ ++  M       D     SIL A ++ G +  GK +  Y M   ++    +S  + 
Sbjct: 448 EAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF-YKMEKEYNVKPALSHYSC 506

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD 333
           +VD+  + G ++ A ++   M+ +     W +++ A     N + A    QK+ D
Sbjct: 507 MVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFD 561


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 296/806 (36%), Positives = 453/806 (56%), Gaps = 41/806 (5%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSL---FCKYNSLSDAARVFEPIPDKL- 102
           L  C +L +L+++   I K+GL       TKLV+         SL  A + FE   + + 
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91

Query: 103 --DALY--HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             DAL+  +++++GY+      +A+   +RM    V P  Y + ++L  C  +     G 
Sbjct: 92  SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGI 151

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++HG ++  G   D+F    +++ YA+CG ++  +K+F+ M ER++VSW +++ G+A+  
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A+ L   M E G R   +T+V ++ A A +  L +G+ V  Y    G      +  
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALVDMY KCG ++ A+ +FD    RN+V +N++++ Y   G   EA+ I  +ML QG  P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT++ A+ A A L DL  G   H  + +  L    S+ N +I MY KC K + A  +F
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVN-------------------------------EALN 427
             +  KT+VSWN++  G+ +NG V                                +A+ 
Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F +M+ + IK D  TM+ +  A   L     AKW+H  + ++    ++ + TAL+DM+A
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           +CG   +A  +F+ M ER V+ W   I      G G+ A  LFN+ML    KP+ + F+ 
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 571

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            ++ACSH G VE+G+H F SL +D+GI P ++HYG MVDLLGRAG L EA+D I+ MP+E
Sbjct: 572 VLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPME 630

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   V+G++L AC++HKNVE+   AA R+ EL P   G HVLL+NIYA+A  W  +A+VR
Sbjct: 631 PNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVR 690

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-T 726
             + +KG++K PG S V++   +H F SG   HP+   I   L+ +      AG++PD +
Sbjct: 691 LNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLS 750

Query: 727 NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
           N + DV++  +E LLS HSEKLAIAFGL+ +     I + KNLR+C DCH+  K  S++ 
Sbjct: 751 NVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIY 810

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            REIIVRD +RFH F+ G+CSC DYW
Sbjct: 811 NREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 38/392 (9%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  C  L++L    R+   I + GL    +    LV ++ K  ++  A R+F+   D+ 
Sbjct: 238 VISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRN 297

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             LY+T+L  YA+     +A++ L  M      P        +     + ++  GK  HG
Sbjct: 298 LVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG 357

Query: 163 QLIVNGFSLDLFAMTG--VVNMYAKCGQ-------------------------------I 189
            +I NG  L+ +   G  +++MY KCG+                               +
Sbjct: 358 YVIRNG--LEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDV 415

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           E A+++F+++PER+ V WNT+++G  Q    E A++L   M  EG + D +T++ I  A 
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASAC 475

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
             +G+  + K VH Y  + G    + ++TALVDM+A+CG  ++A  VF+ M  R+V +W 
Sbjct: 476 GYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWT 535

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           + I      GN E A  +F +ML QGV+P  V  ++ L AC+  G +E+G+ +  L++  
Sbjct: 536 AAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDH 595

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +   +     ++ +  +   +  A D+   +
Sbjct: 596 GISPQIEHYGCMVDLLGRAGLLREAFDLIKSM 627


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/658 (39%), Positives = 406/658 (61%), Gaps = 2/658 (0%)

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           + K++H Q I    SL   + + V+++Y     + EA  +F  +    +++W +++  F 
Sbjct: 23  QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                  AL     M   GR  D     S+L +   +  LR G++VHG+ +R G D  + 
Sbjct: 82  DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
              AL++MY+K   +++ R VF+ M  ++VVS+N++IA Y + G  E+A+R+ ++M    
Sbjct: 142 TGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD 201

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++P   T+   L   ++  D+ +G  +H  + +  + +DV + +SL+ MY+K  +++ + 
Sbjct: 202 LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 261

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +FS L  +  +SWN+++ GY QNGR NEAL  F +M S  ++P +    SVIPA A L+
Sbjct: 262 RVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLA 321

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +   K +H  V+R  F +N+F+ +AL+DMY+KCG +  AR +FD MN     +W  +I 
Sbjct: 322 TLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIM 381

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G+  HG G  AV LF +M     KPN + F+  ++ACSH GLV+E   YF S+ K YG+ 
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
             ++HY A+ DLLGRAG+L EA+DFI KM +EP  +V+  +L +C +HKN+EL EK A +
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           +F +D +  G +VL+ N+YA+   W ++AK+R  + KKGL+K P CS +E+KN+ H F S
Sbjct: 502 IFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVS 561

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HP   RI  FL+ ++++++  GYV DT+ + HDV++  +  LL  HSE+LA+AFG+
Sbjct: 562 GDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 621

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +N+ PG+TI + KN+R+C DCH A K+IS +T REIIVRD  RFH F  G CSCGDYW
Sbjct: 622 INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 240/451 (53%), Gaps = 2/451 (0%)

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           H   + ++S++     L +A  VF+ +       + ++++ +   +    A++  + MR 
Sbjct: 39  HTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRA 98

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
               P    +  +LK C  + ++R G+ +HG ++  G   DL+    ++NMY+K   I+ 
Sbjct: 99  SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDS 158

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
             K+F+ MP +D+VS+NT++AG+AQ+G  E AL +V  M     + D  T+ S+LP  + 
Sbjct: 159 VRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSE 218

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
              +  GK +HGY +R G DS V + ++LVDMYAK  R+E +  VF  +  R+ +SWNS+
Sbjct: 219 YVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSL 278

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           +A YV+ G   EA+R+F++M+   V P  V     + ACA L  L  G  +H  + +   
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           G ++ + ++L+ MYSKC  +  A  IF ++     VSW A+I+G+A +G  +EA++ F +
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M+ + +KP+    V+V+ A + + ++  A  + +++       + +    A+ D+  + G
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458

Query: 491 AVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            +  A      M  E   + W+ ++     H
Sbjct: 459 KLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 137/278 (49%), Gaps = 2/278 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           + I   +I+ G+       + LV ++ K   + D+ RVF  +  +    +++++ GY + 
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              ++A+    +M    V P    ++ ++  C  +  +  GK++HG ++  GF  ++F  
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +V+MY+KCG I+ A K+FDRM   D VSW  I+ G A +G    A+ L   M  +G +
Sbjct: 346 SALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 405

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARL 295
            + +  V++L A ++VG +           +  G +  +    A+ D+  + G++E A  
Sbjct: 406 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYD 465

Query: 296 VFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKML 332
               M+     S W++++++     N E A ++ +K+ 
Sbjct: 466 FISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 503


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/755 (37%), Positives = 446/755 (59%), Gaps = 4/755 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           ++IK GL         L++++ K+  +  A +VF  +P +    +++++ G+++     D
Sbjct: 56  MVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKD 115

Query: 122 AVSFLIRMRYDD--VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
               L+ M   +  + P +     +L VC    +++ G  IHG  +  G S D+     +
Sbjct: 116 CFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSL 175

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRGD 238
           V+MY+KCG + EA  +FD+   ++ VSWNT++ G    G+   A +L   M  +E    +
Sbjct: 176 VDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVN 235

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
            +T+++ILPA   +  LR  K +HGY++R GF     V+   V  YAKCG +  A  VF 
Sbjct: 236 EVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFY 295

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M+++ V SWN++I    + G+P +A+ ++ +M   G+ P   TI   L A A L  L  
Sbjct: 296 SMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRY 355

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  VH  + +  L  D  +  SL+S+Y  C +   A  +F  ++ K+ VSWNAMI GY+Q
Sbjct: 356 GKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ 415

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           NG   +AL  F K+ S   +P    +VSV+ A ++ S +R  K  H   +++   ++VFV
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFV 475

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             + IDMYAK G +  +R++FD +  + + +WN +I  YG HG G+ ++ELF +M +   
Sbjct: 476 ACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQ 535

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+  TF+  ++ CSH+GLVEEG+ YF  ++  +GIEP ++HY  ++D+LGRAGRL++A 
Sbjct: 536 MPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDAL 595

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
             + +MP +P   V+ ++L  C+    +E+G+  A +L EL+P     +V L+N+YA + 
Sbjct: 596 RLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSG 655

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            WD + +VR +++  GLQK  GCS +EL  +VHSF +G    PQSK +      L  ++ 
Sbjct: 656 RWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMC 715

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GY P+T+++ HDV++  +   L  HSEKLAI FGLLN++ G+T+ I KNLR+C DCHN
Sbjct: 716 KIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHN 775

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           A+K++S VTGREII+RD  RFH FK+G+CSCGDYW
Sbjct: 776 ASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 282/522 (54%), Gaps = 16/522 (3%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTY--LLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAM 176
           DA+   +++   D      N+T+  ++K C   G + RG  + IHG +I  G  LD+F  
Sbjct: 13  DAIDMFVKL-ITDTEFNADNFTFPCVIKAC--TGSLDRGLGEVIHGMVIKMGLLLDVFVG 69

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH--EEG 234
             ++ MY K G ++ A K+F  MP R+LVSWN+I++GF++NGF++   D++  M   EEG
Sbjct: 70  NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              D  T+V++LP  A    +++G  +HG A++ G    V V+ +LVDMY+KCG +  A+
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADL 353
           ++FD    +N VSWN+MI      G   EA  +F++M + + +E   VT++  L AC ++
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             L     +H    +     D  + N  ++ Y+KC  +  A  +F  ++ KT+ SWNA+I
Sbjct: 250 SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            G AQNG   +ALN + +M    + PD FT+ S++ A A L  +RY K +H  V+R   E
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            + F+  +L+ +Y  CG   +AR LFD M E+   +WN MI GY  +GL + A+ LF K+
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
           +    +P+DI  +  + ACS    +  G        K   +E V     + +D+  ++G 
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVAC-STIDMYAKSGC 488

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVELGEK 631
           + E+      +     +  + A++ A  +H    +++EL E+
Sbjct: 489 IKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFER 529



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 173/318 (54%), Gaps = 3/318 (0%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  + +LR +  L    I+ G     L     V+ + K   L  A RVF  +  K 
Sbjct: 242 ILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT 301

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ G A+      A++  I+M Y  + P  +    LL     +  +R GKE+HG
Sbjct: 302 VNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHG 361

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ +G  +D F    ++++Y  CG+   A  +FD M E+  VSWN +++G++QNG  E 
Sbjct: 362 FVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPED 421

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L  ++  +G +   I +VS+L A +   +LR+GK  H YA++A     V V+ + +D
Sbjct: 422 ALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTID 481

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G ++ +R VFDG+K++++ SWN++IAAY   G+ EE++ +F++M   G  P   T
Sbjct: 482 MYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFT 541

Query: 343 IMEALHACADLGDLERGI 360
            +  L  C+  G +E G+
Sbjct: 542 FIGILTVCSHAGLVEEGL 559


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/619 (42%), Positives = 394/619 (63%), Gaps = 1/619 (0%)

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F ++ + ++  WNT++ G   N   + A++    M  EG   +  T   +L A A +  
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L++G  +H   ++ GFD  V V T+LV +YAKCG +E A  VFD +  +NVVSW ++I+ 
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y+  G   EA+ +F+++L+  + P + TI+  L AC  LGDL  G ++HK + ++ +  +
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  SL+ MY+KC  +++A  +F  +  K +VSW AMI GYA NG   EA++ F +M+ 
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +N+KPD +T+V V+ A A L  +   +W+  LV R+ F  N  + TALID+YAKCG++  
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  M E+    WN +I G   +G  K +  LF ++ +   KP+  TF+  +  C+H
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTH 427

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GLV+EG  YF S+ + + + P ++HYG MVDLLGRAG L+EA   I+ MP+E    V+G
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 487

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+LGAC+IH++ +L E A  +L EL+P   G +VLL+NIY+A   WD+ AKVR  M +K 
Sbjct: 488 ALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
           +QK PGCS +E+   VH F  G   HP S++IY  L+ L  ++K AGYVP T+ +  D+E
Sbjct: 548 IQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIE 607

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           +  +E+ L  HSEKLAIAFGL++++P + I + KNLRVCGDCH A K IS +TGREI VR
Sbjct: 608 EEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVR 667

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFHCF+ G CSC DYW
Sbjct: 668 DNNRFHCFREGSCSCNDYW 686


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 286/781 (36%), Positives = 459/781 (58%), Gaps = 10/781 (1%)

Query: 39  YRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           +  PS  +++ C  + ++R    I  ++IK GL         LV ++ K  ++ +A +VF
Sbjct: 147 FTFPS--VIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVF 204

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEI 154
           + +P+     +++M+  +++     D+   L+ M  ++ + P V     +L VC   GE+
Sbjct: 205 DFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEV 264

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G  IHG  +  G S ++     +V MY+KCG + EA   F +   +++VSWNT+++ F
Sbjct: 265 DIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF 324

Query: 215 AQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           +  G    A +L+  M  +G   + + +TI+++LPA  +   LR  K +HGY+ R  F  
Sbjct: 325 SLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH 384

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V +S A +  YAKCG + +A  VF G+  + V SWN++I  + + G+P +A+ +  +M 
Sbjct: 385 -VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             G +P   TI   L ACA L  L+ G  +H  + +  L TD  +  SL+S Y  C K  
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKAS 503

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F +++ K LVSWNAMI GY+QNG   E+L  F K  S+ I+     +VSV  A +
Sbjct: 504 SARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACS 563

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
           +LS +R  K  H  V+++   ++ FV  ++IDMYAK G +  +R +FD + +++V +WN 
Sbjct: 564 QLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNA 623

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           +I  +G HG GK A+EL+ +M +    P+  T++  + AC H+GLVEEG+ YF  ++   
Sbjct: 624 IIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFN 683

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            IEP ++HY  ++D+L RAGRL++A   + +MP E    ++ ++L +C+    +E+GEK 
Sbjct: 684 LIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKV 743

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +L EL+PD+   +VLL+N+YA    WD + +VR +M++ GLQK  GCS +E+   V+S
Sbjct: 744 AKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYS 803

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           F  G +  P+S  I      L + I   GY P+T+S+ H+V +  + ++L  HSEKLAI+
Sbjct: 804 FVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAIS 863

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           FGLL ++ G+T+ I KNLR+C DCHNA K IS    REI+VRD  RFH F++G+CSC DY
Sbjct: 864 FGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDY 923

Query: 812 W 812
           W
Sbjct: 924 W 924


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 285/771 (36%), Positives = 444/771 (57%), Gaps = 4/771 (0%)

Query: 46  LLEVCT--SLKELRRILPL-IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT   L +L R++ + + K G   +      L+SL+ +  S   A RVF  +    
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ G+A+    D A+     M+   ++P       LL  C  VG++R+GK++H 
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L+  G SLD      ++++Y K G IEEA ++FD     ++V WN ++  + Q      
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAK 328

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           + D+  RM   G R +  T   +L    + G + +G+ +H   ++ GF S + VS  L+D
Sbjct: 329 SFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLID 388

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+K G ++ A+ + D ++ ++VVSW SMIA YV+    +EA+  F++M   G+ P N+ 
Sbjct: 389 MYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG 448

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  A+ ACA +  + +G  +H  +       DVS+ N L+ +Y++C     A   F  ++
Sbjct: 449 LASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE 508

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  ++WN +I G+AQ+G   EAL  F KM     K + FT VS I A A L+ I+  K 
Sbjct: 509 HKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQ 568

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IHA VI++ +     +  ALI +Y KCG++  A+  F  M +R+  +WN +I     HG 
Sbjct: 569 IHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGR 628

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G  A++LF++M +   KP+D+TF+  ++ACSH GLVEEG+ YF S+  ++GI P  DHY 
Sbjct: 629 GLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYA 688

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VD+LGRAG+L+ A  F+++MPI     V+  +L ACK+HKN+E+GE AA  L EL+P 
Sbjct: 689 CVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPH 748

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N YA    W    ++R IM+ +G++K PG S +E+KN VH+F+ G   HP 
Sbjct: 749 DSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           + +IY FL  L D +   GY  +   + H+ E   ++     HSEKLA+AFGL++     
Sbjct: 809 ADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCM 868

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLRVC DCH   K+ S V GREI++RD++RFH F NG CSCGDYW
Sbjct: 869 PLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 281/566 (49%), Gaps = 10/566 (1%)

Query: 44  ALLLEVCTSLKELRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A  L  C        ++P I    I  GL    +    L+ L+ K   +  A RVFE + 
Sbjct: 45  ACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELS 104

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + +  +  +L GYA+    ++AV     M    V P  Y  + +L  C      + G+ 
Sbjct: 105 VRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRL 164

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH Q+   GF  + F    ++++Y +C     A ++F  M   D V++NT+++G AQ G 
Sbjct: 165 IHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGH 224

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            + AL +   M   G   D +TI S+L A + VG LR GK +H Y ++AG      +  +
Sbjct: 225 GDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y K G +E A  +FD     NVV WN M+ AY +  +  ++  IF +ML  GV P 
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C   G++  G  +H L  +    +D+ ++  LI MYSK   +D+A  I  
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            ++ K +VSW +MI GY Q+    EAL  F +M++  I PD+  + S I A A +  +  
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IHA V  S +  +V +   L+ +YA+CG    A + F+ +  +   TWN +I G+  
Sbjct: 465 GSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQ 524

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPV 577
            GL + A+++F KM +   K N  TF+ +ISA ++   +++G  IH    +K  Y  E  
Sbjct: 525 SGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHA-RVIKTGYTSETE 583

Query: 578 MDHYGAMVDLLGRAGRLNEA-WDFIQ 602
           + +  A++ L G+ G + +A  DF +
Sbjct: 584 ISN--ALISLYGKCGSIEDAKMDFFE 607



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 146/303 (48%), Gaps = 10/303 (3%)

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  R   S+N  +A ++   +PE+ + +F     Q +    V    AL AC   G   R 
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSG--RRW 58

Query: 360 IFVHKLLDQ---LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             V ++  +     L     + N LI +Y+K   V RA  +F +L  +  VSW A++ GY
Sbjct: 59  PLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGY 118

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           AQNG   EA+  + +M    + P  + + S++ A  +  + +  + IH  V +  F    
Sbjct: 119 AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSET 178

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           FV  ALI +Y +C +   A  +F  M      T+N +I G+   G G  A+ +F++M   
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLS 238

Query: 537 PTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
              P+ +T    ++ACS  G + +G  +H +  LK    ++ +M+  G+++DL  ++G +
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYL-LKAGMSLDYIME--GSLLDLYVKSGDI 295

Query: 595 NEA 597
            EA
Sbjct: 296 EEA 298


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/738 (36%), Positives = 436/738 (59%), Gaps = 7/738 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++ ++  L +A  VFE + ++    +++++ GY      +DA+    + R   + P 
Sbjct: 162 LIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPD 221

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  CG +  ++ G  +HG +   G + D+    G+++MY K  ++ EA ++F 
Sbjct: 222 CFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M  +D V+WNT++ G+AQ G  E ++ L   M + G   D ++I S + A    G L++
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQV 340

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK VH Y + +GF+        L+DMYAKCG +  A+ VFD  K ++ V+WNS+I  Y +
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  +E +  F KM+    +P +VT +  L   + L D+ +G  +H   D +K G +  +
Sbjct: 401 SGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIH--CDVIKFGFEAEL 457

Query: 378 T--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
              NSL+ +Y+KC ++D    +FS +    ++SWN +I                 +MR++
Sbjct: 458 IIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTE 517

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            + PD  T++ ++P  + L+V R  K IH  + +S FE NV +  ALI+MY+KCG++   
Sbjct: 518 GLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENC 577

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F  M E+ V TW  +I  +G +G GK A++ F  M      P+ + F+  I ACSHS
Sbjct: 578 IKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHS 637

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G+V+EG+ +F  +K DY +EP M+HY  +VDLL R+G L +A +FI  MP++P  +++GA
Sbjct: 638 GMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC+   N  + ++ + ++ EL+ D+ GY+VL++NIYA    WD++  VR  M+ KGL
Sbjct: 698 LLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGL 757

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVED 734
           +K PG S +E++  V+ F +G     Q  ++   LE L+  +   GYV D   ++HDVE+
Sbjct: 758 KKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEE 817

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             + ++L  HSE+LAIAFGLLN+ PGS + + KNLRVCGDCH  TKYI+ +  REI+VRD
Sbjct: 818 DDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRD 877

Query: 795 MHRFHCFKNGVCSCGDYW 812
            +RFH FK+G CSCGD+W
Sbjct: 878 ANRFHRFKDGACSCGDHW 895



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 239/454 (52%), Gaps = 4/454 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PER 202
           LLK         + + +H  +I +G SL +     +++ YA+      +  +F  + P  
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++  WN+I+     NG    AL   T M E+  + D  T  S++ + A +  L +G  VH
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            +AM  GF+S + +  AL+DMY++   ++ AR VF+ M +R+ VSWNS+I+ Y   G  E
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A+ ++ K    G+ P   T+   L AC  L  ++ G+ VH +++++ +  DV + N L+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           SMY K +++  A  +FSK+  K  V+WN MI GYAQ GR   ++  F  M    + PD  
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDML 323

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ S I A  +   ++  K++H  +I S FE +      LIDMYAKCG +  A+ +FD  
Sbjct: 324 SITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTT 383

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
             +   TWN +I+GY   G  K  +E F KM++   KP+ +TF+  +S  S    + +G 
Sbjct: 384 KCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGR 442

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
                + K +G E  +    +++D+  + G +++
Sbjct: 443 GIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDD 475



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 429 FCKMRSKNIKP-DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
           FC   +   +P   F   S++  L+        + +H+L+I S    +V     LI  YA
Sbjct: 6   FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65

Query: 488 KCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           +     ++ ++F  ++   +V  WN +I     +GL   A+  + +M E   +P+  TF 
Sbjct: 66  QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125

Query: 547 CAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
             I++C+    +E G  +H       + G E  +    A++D+  R   L+ A    ++M
Sbjct: 126 SVINSCARILDLELGCIVHEHA---MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 605 PIEPGITVFGAMLGAC 620
                ++    + G C
Sbjct: 183 SNRDSVSWNSLISGYC 198


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/733 (37%), Positives = 439/733 (59%), Gaps = 3/733 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++     A +VF  +P++    ++ M+ GY K   L++A+    RM +    P 
Sbjct: 135 MLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPD 194

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG V ++  G+E+H  ++  G  +++  +  +V MYAKCG +E A K+FD
Sbjct: 195 VYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFD 254

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +N   E  L+L   M E+    + +TI S+  A   +  L  
Sbjct: 255 GMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDF 314

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +H  A++ GF + V    +L+ MY+  GR+  A  VF  M++R+ +SW +MI+ Y +
Sbjct: 315 AKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEK 374

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P +VT+  AL ACA LG L+ GI +H+L         + +
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVV 434

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ MY+K K +++A ++F  +  K ++SW++MI G+  N +  EAL YF  M + ++
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DV 493

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R       +V  AL+D+Y KCG  G A A
Sbjct: 494 KPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F     + V +WN+M+ G+  HG G  A+  FN+MLE    P+++TF+  +  CS +G+
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGM 613

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G   F S+ + Y I P + HY  MVDLL R GRL E ++FI +MPI P   V+GA+L
Sbjct: 614 VSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALL 673

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
             C+IH+N+ELGE AA  + EL+P++ GYHVLL+++YA A MW +++KVR  M  KGL+ 
Sbjct: 674 NGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEH 733

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP-DTNSIHDVEDYV 736
             GCS VE+K  +H+F +    HPQ K I   L+ + + +KA+G+ P ++ S+ D E   
Sbjct: 734 DYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLEDKE-VS 792

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           ++++L  HSE+LA+AFGL+N++PG++I + KN   C  CH   + IS +  REI VRD  
Sbjct: 793 KDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTK 852

Query: 797 RFHCFKNGVCSCG 809
            FH F++G CSCG
Sbjct: 853 EFHHFRDGSCSCG 865



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 181/369 (49%), Gaps = 10/369 (2%)

Query: 260 AVHG-YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           A HG + +R G         A++ M  + G    A  VF  M  R+V SWN M+  Y + 
Sbjct: 122 AAHGTFGLRLG--------NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKA 173

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+ ++ +ML  G  P   T    L +C  + DL  G  VH  + +  LG +V + 
Sbjct: 174 GFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVL 233

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+L++MY+KC  V+ A  +F  +     +SWNAMI G+ +N      L  F  M    ++
Sbjct: 234 NALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVE 293

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+  T+ SV  A   LS + +AK IHAL ++  F  +V    +LI MY+  G +G A  +
Sbjct: 294 PNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTV 353

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R   +W  MI GY  +G    A+E++  M      P+D+T   A++AC+  G +
Sbjct: 354 FSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRL 413

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           + GI     L    G    +    A+V++  ++  + +A +  + MP +  I+    + G
Sbjct: 414 DVGIK-LHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAG 472

Query: 619 ACKIHKNVE 627
            C  HKN E
Sbjct: 473 FCFNHKNFE 481



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 177/371 (47%), Gaps = 6/371 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           + L   + I  L +K G      F   L+ ++     + +A  VF  +  +    +  M+
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY K    D A+     M  ++V+P        L  C  +G +  G ++H      GF 
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFI 429

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +     +V MYAK   IE+A ++F  MP++D++SW++++AGF  N     AL     M
Sbjct: 430 RYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM 489

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +  + + +T ++ L A A  GSLR GK +H + +R G  S   V  AL+D+Y KCG+ 
Sbjct: 490 LAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT 548

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
             A   F    +++VVSWN M+A +V  G+ + A+  F +ML+ G  P  VT +  L  C
Sbjct: 549 GYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGC 608

Query: 351 ADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           +  G + +G    H + ++  +  ++     ++ + S+  ++    +  +++     ++ 
Sbjct: 609 SRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMP----ITP 664

Query: 410 NAMILGYAQNG 420
           +A + G   NG
Sbjct: 665 DAAVWGALLNG 675


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/658 (41%), Positives = 402/658 (61%), Gaps = 6/658 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           K+IH Q++     +D F+ + +V   A    G +  A  +F+++P     + N+I+ G+ 
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                  A+     M  +G   D  T  S+     + G L  GK +H ++ + GF S   
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLF---KSCGVLCEGKQLHCHSTKLGFASDAY 173

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +   L++MY+ CG + +AR VFD M +++VVSW +MI AY +   P EA+++F++M    
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V+P  +T++  L ACA   DLE    VHK +D+  +G    +T++L+ +Y KC     A 
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
           D+F+K+  K L  WN MI G+ ++    EAL+ F +M+   +K D  TM S++ A   L 
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +   KW+H  + +   E +V + TAL+DMYAKCG++ +A  +F  M E+ V TW  +I 
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G    G G  A+ELF++M     KP+ ITF+  ++ACSH+GLV EGI YF S+   YGI+
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P ++HYG MVD+LGRAGR+ EA D IQ MP+ P   V   +L AC+IH N+ + E+AA +
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQ 533

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           L ELDP  GG +VLL+NIY++   W+   K+R +M ++ ++K PGCS +E+   VH F  
Sbjct: 534 LIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVK 593

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HPQS  IY  L+ ++  +K+AGYVPD + +  D+++  +EN LS HSEKLAIAFGL
Sbjct: 594 GDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGL 653

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+++PG+ I + KNLRVC DCH+A K+IS V  REIIVRD +RFH F  G CSC D+W
Sbjct: 654 LSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 247/471 (52%), Gaps = 8/471 (1%)

Query: 36  SRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN---SLSDAA 92
           S+I  HP  L LE CT++ +L++I   ++++ L       +K+V+ FC  +   SL  A 
Sbjct: 36  SQIQLHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVA-FCALHDSGSLPYAR 94

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
            VF  IP+      +++++GY        A+ F   M    + P  + +  L K CG + 
Sbjct: 95  LVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC 154

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           E   GK++H      GF+ D +    ++NMY+ CG +  A K+FD+M  + +VSW T++ 
Sbjct: 155 E---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIG 211

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            +AQ      A+ L  RM     + + IT+V++L A A    L   K VH Y    G   
Sbjct: 212 AYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGF 271

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              +++AL+D+Y KCG    AR +F+ M  +N+  WN MI  +VE  + EEA+ +F +M 
Sbjct: 272 HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ 331

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             GV+   VT+   L AC  LG LE G ++H  +++ K+  DV++  +L+ MY+KC  ++
Sbjct: 332 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F ++  K +++W A+I+G A  G+  +AL  F +M+   +KPD+ T V V+ A +
Sbjct: 392 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 451

Query: 453 ELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
              ++     + +++  +   + ++     ++DM  + G +  A  L   M
Sbjct: 452 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 303/828 (36%), Positives = 462/828 (55%), Gaps = 25/828 (3%)

Query: 8   QLSVFTNSTP----------TQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL- 56
           Q   FTN  P             LH+   TL    +  S       +L L+ C   +   
Sbjct: 24  QFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD 83

Query: 57  --RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGY 113
               +   + +S L    +    L+SL+ K      A  +F+ +    D + +  M+  +
Sbjct: 84  IGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCF 143

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLD 172
           A       A+   + M  +   P  Y +    + C     +  G  I G ++  G+   D
Sbjct: 144 ANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSD 203

Query: 173 LFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +    G+++M+ K  G +  A+K+F++MPER+ V+W  ++    Q G+A  A+DL   M 
Sbjct: 204 VCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI 263

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---G 288
             G   D  T+  ++ A AN+  L +G+ +H  A+R G      V   L++MYAKC   G
Sbjct: 264 LSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDG 323

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
            +  AR +FD +   NV SW +MI  YV+ GG  EEA+ +F+ M+   V P + T    L
Sbjct: 324 SMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTL 383

Query: 348 HACADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            ACA+L  L  G  +F H +  +L   +   + NSLISMY++  ++D A   F  L  K 
Sbjct: 384 KACANLAALRIGEQVFTHAV--KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           L+S+N +I  YA+N    EAL  F ++  + +   +FT  S++   A +  I   + IHA
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            VI+S  + N  V  ALI MY++CG + +A  +F+ M +R+V +W  +I G+  HG    
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ELF+KMLE   +PN +T++  +SACSH GLV EG  +F S+  ++G+ P M+HY  MV
Sbjct: 562 ALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMV 621

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           D+LGR+G L+EA  FI  MP +    V+   LGAC++H N+ELG+ AA  + E +P +  
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            ++LL+N+YA+ S WD+++ +R  M++K L K  GCS VE++N+VH FY G T HP++  
Sbjct: 682 AYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY  L+ L  +IK  GYVP+ + + HDVE+  +E LL  HSEK+A+AFGL+++S    I 
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIR 801

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + KNLR+CGDCH+A KYIS+ TGREIIVRD +RFH  K+G CSC +YW
Sbjct: 802 VFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 296/789 (37%), Positives = 459/789 (58%), Gaps = 35/789 (4%)

Query: 40  RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA----RVF 95
           R P   L+ + ++L+ L +IL + + SG     L      SL  +Y SL        R+F
Sbjct: 18  RRPYLRLVALSSTLRHLDQILAVSLASG--HYPLDPAPATSLLLRYASLRAPTGHLLRLF 75

Query: 96  E--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDV 151
              P PD+           + + A L    S   R+ +   D     +  T L  +C   
Sbjct: 76  RGFPRPDR-----------FLRNALLRSLPSLRPRLLFPCPDSFSFAFAATSLAALCSRG 124

Query: 152 GEIRRGKE---IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           G          +H   +  G++ D F  + +  +Y    +++ A K+FD +P  D V WN
Sbjct: 125 GGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWN 184

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           T++AG + +     A++   RM  +G  R D  T+ S+LPA A V  + +G+ VH +A +
Sbjct: 185 TLLAGLSGSE----AVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEK 240

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G     +V T L+ +Y+KCG VE+AR +FD M+  ++V++N++I+ Y   G    ++ +
Sbjct: 241 CGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNL 300

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F +++  G+ P + T++  +   +  G       +H  + +     +  ++ ++ +++ +
Sbjct: 301 FTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCR 360

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
              ++ A   F  +  KT+ SWNAMI GYAQNG    A+  F +M   N++P+  T+ S 
Sbjct: 361 LNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISST 420

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + A A+L  +   KW+H ++     E NV+VMTALIDMYAKCG++  AR +F+ M+ ++V
Sbjct: 421 LSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN MI GYG HG G  A++L+  ML+    P   TFL  + ACSH GLVEEG   F S
Sbjct: 481 VSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRS 540

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGACKIHK 624
           +  DY I P ++H   MVDLLGRAG+L EA++ I + P   + PG  V+GA+LGAC +HK
Sbjct: 541 MTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVHK 598

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           + +L + A+ +LFELDP+  GY+VLL+N++ +   + + A VR   + + L KTPG +L+
Sbjct: 599 DSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLI 658

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSS 743
           E+ N+ H F +G   HPQS+ IY++LE L  ++  AGY P+T  +++DVE+  +E+++  
Sbjct: 659 EIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKV 718

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLAIAFGLL++ PG+ I I KNLRVC DCHNATK+IS VT R I+VRD  RFH F++
Sbjct: 719 HSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRD 778

Query: 804 GVCSCGDYW 812
           GVCSCGDYW
Sbjct: 779 GVCSCGDYW 787


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/626 (42%), Positives = 392/626 (62%), Gaps = 5/626 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           AYK+FD+MPER+LV+W  ++  FAQ G A  A+DL   M   G   D  T  S+L A   
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNVVSW 308
           +G L +GK +H   +R G    V V  +LVDMYAKC   G V+ +R VF+ M   NV+SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 309 NSMIAAYVEGGN-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            ++I AY + G   +EA+ +F KM+   + P + +    L AC +L D   G  V+    
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +L + +   + NSLISMY++  +++ A   F  L  K LVS+NA++ GYA+N +  EA  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F ++    I   +FT  S++   A +  +   + IH  +++  ++ N  +  ALI MY+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           +CG +  A  +F+ M +R+V +W  MI G+  HG    A+E+F+KMLE  TKPN+IT++ 
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH G++ EG  +F S+ K++GI P M+HY  MVDLLGR+G L EA +FI  MP+ 
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
               V+  +LGAC++H N ELG  AA  + E +PD+   ++LL+N++A+A  W  + K+R
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+++ L K  GCS +E++N VH F+ G T HPQ+ +IY  L+ L  +IK  GY+PDT+
Sbjct: 489 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 548

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HD+E+  +E  L  HSEK+A+AFGL+++S    I I KNLRVCGDCH A KYIS+ T
Sbjct: 549 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 608

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GREI+VRD +RFH  KNGVCSC DYW
Sbjct: 609 GREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 240/477 (50%), Gaps = 37/477 (7%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A +VF+ +P++    +  M+  +A+     DA+   + M      P  + Y+ +L  C +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC---GQIEEAYKMFDRMPERDLVSW 207
           +G +  GK++H ++I  G +LD+     +V+MYAKC   G ++++ K+F++MPE +++SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 208 NTIVAGFAQNGFAEL-ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
             I+  +AQ+G  +  A++L  +M     R +  +  S+L A  N+     G+ V+ YA+
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           + G  S+  V  +L+ MYA+ GR+E AR  FD +  +N+VS+N+++  Y +    EEA  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F ++ D G+  +  T    L   A +G + +G  +H  L +    ++  + N+LISMYS
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           +C  ++ A  +F++++ + ++SW +MI G+A++G    AL  F KM     KP+  T V+
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A + + +I   +                       MY + G V              
Sbjct: 369 VLSACSHVGMISEGQ------------------KHFNSMYKEHGIV------------PR 398

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           +  +  M+D  G  GL   A+E  N M   P   + + +   + AC   G  E G H
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGNTELGRH 452



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 182/335 (54%), Gaps = 10/335 (2%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKY--- 85
            Y+P R + + S  +L  CT L  L   +++   +I+ GL         LV ++ K    
Sbjct: 51  GYVPDR-FTYSS--VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD 107

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD-DAVSFLIRMRYDDVAPVVYNYTYL 144
            S+ D+ +VFE +P+     +  ++  YA+    D +A+    +M    + P  ++++ +
Sbjct: 108 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 167

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           LK CG++ +   G++++   +  G +        +++MYA+ G++E+A K FD + E++L
Sbjct: 168 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 227

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VS+N IV G+A+N  +E A  L   + + G      T  S+L   A++G++  G+ +HG 
Sbjct: 228 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 287

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            ++ G+ S   +  AL+ MY++CG +E A  VF+ M+ RNV+SW SMI  + + G    A
Sbjct: 288 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 347

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           + +F KML+ G +P  +T +  L AC+ +G +  G
Sbjct: 348 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 382



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C +L +     ++    +K G+   +     L+S++ +   + DA + F+ + +K 
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              Y+ ++ GYAK    ++A      +    +    + +  LL     +G + +G++IHG
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +L+  G+  +      +++MY++CG IE A+++F+ M +R+++SW +++ GFA++GFA  
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
           AL++  +M E G + + IT V++L A ++VG +  G K  +      G    +     +V
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406

Query: 282 DMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV-EPT 339
           D+  + G +  A    + M    + + W +++ A    GN E      + +L+Q   +P 
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 466

Query: 340 NVTIMEALHACA 351
              ++  LHA A
Sbjct: 467 AYILLSNLHASA 478


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 294/845 (34%), Positives = 467/845 (55%), Gaps = 45/845 (5%)

Query: 8   QLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSG 67
            LS    +TPT     +++ L     I ++    P+    + C ++ EL+++   I K+G
Sbjct: 6   HLSTLIPATPTSVALPNQNELK----ILTKHRSSPTGSF-KKCKTMTELKQLHSQITKNG 60

Query: 68  LCDQHLFQTKLVSLFCK---YNSLSDAARVFEP-IPDK----LDALYHTMLKGYAKFASL 119
           L    L  T L+S   +   + SL  A +  E  I D        ++ ++++G++     
Sbjct: 61  LNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLG 120

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
             A+    ++      P  + + ++L  C     +  G ++HG ++  GF  D+F    +
Sbjct: 121 YKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSL 180

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           ++ Y +CG+I+   ++FD+M ER++VSW +++ G+A+ G  + A+ L   M E G R + 
Sbjct: 181 IHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNS 240

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T+V ++ A A +  L++G+ V         +    +  ALVDMY KCG ++ AR +FD 
Sbjct: 241 VTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDE 300

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
              +N+V +N++++ YV  G   E + +  +ML  G  P  +T++ A+ AC++L D+  G
Sbjct: 301 CVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG 360

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            + H  + +  L    ++ N++I+MY KC K + A  +F ++  KT VSWN++I G+ +N
Sbjct: 361 KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRN 420

Query: 420 GRVN-------------------------------EALNYFCKMRSKNIKPDSFTMVSVI 448
           G +                                EA+  F  M+S+ I  D  TMV V 
Sbjct: 421 GDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVA 480

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A   L  +  AKWIH  + +     ++ + TAL+DM+A+CG   +A  +F+ M +R V+
Sbjct: 481 SACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVS 540

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            W   I      G G  A+ELF++ML+   KP+ + F+  ++A SH GLVE+G H F S+
Sbjct: 541 AWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSM 600

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           K  YGI P   HYG MVDLLGRAG L+EA   I  M +EP   ++G++L AC++HKNV++
Sbjct: 601 KDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDI 660

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
              AA R+ ELDP+  G HVLL+NIYA+A  WD +AKVR  +++KG  K PG S +E+  
Sbjct: 661 AAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEING 720

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEK 747
           ++  F +G   HP+   I   L+ +   ++  GYVPD TN + DV +  +E LLS HSEK
Sbjct: 721 KIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEK 780

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           LAIAF L+++  G  I + KNLR+C DCH+  K +S    REIIVRD +RFH F+ G CS
Sbjct: 781 LAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCS 840

Query: 808 CGDYW 812
           CGDYW
Sbjct: 841 CGDYW 845


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/626 (42%), Positives = 392/626 (62%), Gaps = 5/626 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           AYK+FD+MPER+LV+W  ++  FAQ G A  A+DL   M   G   D  T  S+L A   
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNVVSW 308
           +G L +GK +H   +R G    V V  +LVDMYAKC   G V+ +R VF+ M   NV+SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 309 NSMIAAYVEGGN-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            ++I AY + G   +EA+ +F KM+   + P + +    L AC +L D   G  V+    
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +L + +   + NSLISMY++  +++ A   F  L  K LVS+NA++ GYA+N +  EA  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F ++    I   +FT  S++   A +  +   + IH  +++  ++ N  +  ALI MY+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           +CG +  A  +F+ M +R+V +W  MI G+  HG    A+E+F+KMLE  TKPN+IT++ 
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH G++ EG  +F S+ K++GI P M+HY  MVDLLGR+G L EA +FI  MP+ 
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
               V+  +LGAC++H N ELG  AA  + E +PD+   ++LL+N++A+A  W  + K+R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+++ L K  GCS +E++N VH F+ G T HPQ+ +IY  L+ L  +IK  GY+PDT+
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 543

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HD+E+  +E  L  HSEK+A+AFGL+++S    I I KNLRVCGDCH A KYIS+ T
Sbjct: 544 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 603

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GREI+VRD +RFH  KNGVCSC DYW
Sbjct: 604 GREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 240/477 (50%), Gaps = 37/477 (7%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A +VF+ +P++    +  M+  +A+     DA+   + M      P  + Y+ +L  C +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC---GQIEEAYKMFDRMPERDLVSW 207
           +G +  GK++H ++I  G +LD+     +V+MYAKC   G ++++ K+F++MPE +++SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 208 NTIVAGFAQNGFAEL-ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
             I+  +AQ+G  +  A++L  +M     R +  +  S+L A  N+     G+ V+ YA+
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           + G  S+  V  +L+ MYA+ GR+E AR  FD +  +N+VS+N+++  Y +    EEA  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F ++ D G+  +  T    L   A +G + +G  +H  L +    ++  + N+LISMYS
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           +C  ++ A  +F++++ + ++SW +MI G+A++G    AL  F KM     KP+  T V+
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A + + +I   +                       MY + G V              
Sbjct: 364 VLSACSHVGMISEGQ------------------KHFNSMYKEHGIV------------PR 393

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           +  +  M+D  G  GL   A+E  N M   P   + + +   + AC   G  E G H
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHGNTELGRH 447



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 182/335 (54%), Gaps = 10/335 (2%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKY--- 85
            Y+P R + + S  +L  CT L  L   +++   +I+ GL         LV ++ K    
Sbjct: 46  GYVPDR-FTYSS--VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD 102

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD-DAVSFLIRMRYDDVAPVVYNYTYL 144
            S+ D+ +VFE +P+     +  ++  YA+    D +A+    +M    + P  ++++ +
Sbjct: 103 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 162

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           LK CG++ +   G++++   +  G +        +++MYA+ G++E+A K FD + E++L
Sbjct: 163 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 222

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VS+N IV G+A+N  +E A  L   + + G      T  S+L   A++G++  G+ +HG 
Sbjct: 223 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 282

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            ++ G+ S   +  AL+ MY++CG +E A  VF+ M+ RNV+SW SMI  + + G    A
Sbjct: 283 LLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 342

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           + +F KML+ G +P  +T +  L AC+ +G +  G
Sbjct: 343 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 377



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C +L +     ++    +K G+   +     L+S++ +   + DA + F+ + +K 
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              Y+ ++ GYAK    ++A      +    +    + +  LL     +G + +G++IHG
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +L+  G+  +      +++MY++CG IE A+++F+ M +R+++SW +++ GFA++GFA  
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
           AL++  +M E G + + IT V++L A ++VG +  G K  +      G    +     +V
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401

Query: 282 DMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV-EPT 339
           D+  + G +  A    + M    + + W +++ A    GN E      + +L+Q   +P 
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 461

Query: 340 NVTIMEALHACA 351
              ++  LHA A
Sbjct: 462 AYILLSNLHASA 473


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 299/821 (36%), Positives = 455/821 (55%), Gaps = 91/821 (11%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR----Y 131
           + LV L+ K   + +A +VFE        L+ +M+ GY +    ++A++   +M     +
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCF 202

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
           D   P+V +   LL +    G     ++I   L       D+ + + ++  YA      E
Sbjct: 203 DGDLPLVNS---LLNLYAKTG----CEKIAANLFSKMPEKDVISWSTMIACYANNEAANE 255

Query: 192 AYKMFDRMPER-----------------------------------DLVSWNTIVAGFAQ 216
           A  +F  M E+                                   D+VSW  +++G+AQ
Sbjct: 256 ALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQ 315

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG A  ++ +   M  +G + D + +V IL A + +G  +    +HGY +R+GF+S V V
Sbjct: 316 NGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFV 375

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD--Q 334
             +L+++Y+KCG +  A  +F GM  R+VV W+SMIAAY   G   EA+ IF +M+   Q
Sbjct: 376 GASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQ 435

Query: 335 GVEPTNVTIME-------ALHACADLGDLERGIFVHKLLDQLKL--------------GT 373
           G+       M+       A+ +C     +   +    +    +                 
Sbjct: 436 GITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAA 495

Query: 374 DVSMTN--------------SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           D+S +N                  MY    ++D A+ +F  +       WN MI G+A +
Sbjct: 496 DMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 555

Query: 420 GRVNEALNYFCKMRSKNIKPDS-------FTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           GR   +L  + KM  K +KPD+        +++SV+ A   L  +R  +W H+ VI++ F
Sbjct: 556 GRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGF 615

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E ++ V TA++DMY+KCG++  AR LFD    + +  W+ MI  YG HG G+ A++LF++
Sbjct: 616 EFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQ 675

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M++   +P+ +TF C +SACSHSGL+EEG  YF  + +++ I   + +Y  MVDLLGRAG
Sbjct: 676 MVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAG 735

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           +L+EA D I+ MP+EP  +++G++LGAC+IH N++L EK A+ LF LDP   GYHVLL+N
Sbjct: 736 QLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSN 795

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           IYAA S W+++ KVR +M ++G  K  G SLVE  N+VH F  G   HPQ +++Y  LE 
Sbjct: 796 IYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEE 855

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L   +K  GYVP T+ + HD+E+  +E  LS HSE+LAIAFGL+N+SPG+T+ I KNLR+
Sbjct: 856 LAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRI 915

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCHNA K IS +  R I+VRDMHRFH F++GVCSCGDYW
Sbjct: 916 CGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 155/630 (24%), Positives = 279/630 (44%), Gaps = 79/630 (12%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L + C + + + ++   + K+G+     F TKL SL+ K  SL  A +VF+  P     L
Sbjct: 10  LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL 69

Query: 106 YHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +++ L+ Y +    ++ +  F + +     AP  +     LK C  +  +  GK IHG  
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 165 IVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
             N     D+F  + +V +Y+KCGQ+ EA K+F+     D V W ++V G+ QN   E A
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 224 LDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHG----------------YAM 266
           L L ++M   +   GD   + S+L   A  G  +I   +                  YA 
Sbjct: 190 LALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYAN 249

Query: 267 RAGFDSIVNV------------STALVDMYAKCG---RVETARLVFDGMKSRNVVSWNSM 311
               +  +N+            S  +V     C     +E  + +      ++VVSW ++
Sbjct: 250 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVAL 309

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           ++ Y + G   ++M +F+ ML  G++P  V +++ L A ++LG  ++ + +H  + +   
Sbjct: 310 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 369

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            ++V +  SLI +YSKC  +  A  +F  +  + +V W++MI  Y  +GR  EAL  F +
Sbjct: 370 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 429

Query: 432 MRSKNIKPDSFTMVSVIP------ALAELSVIRYAKW-IHALVIRSCF------------ 472
           M        S   +S+ P      A+   ++  +  W + A  +R+ F            
Sbjct: 430 MIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPT 489

Query: 473 ---------EKNVF---------VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
                    + N+F         ++T    MY     +  A  +F+ +       WNVMI
Sbjct: 490 YPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 549

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTK-------PNDITFLCAISACSHSGLVEEGIHYFTS 567
            G+ T G   +++EL++KM+E   K       PN ++ L  + AC + G + +G  +F S
Sbjct: 550 RGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG-EWFHS 608

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
                G E  +    A++D+  + G L+ A
Sbjct: 609 YVIQTGFEFDILVATAIMDMYSKCGSLDLA 638



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 11/264 (4%)

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D      L S+Y+KC  +  A  +F +     +  WN+ +  Y +  +  E L  F  M 
Sbjct: 35  DTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMI 94

Query: 434 -SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGA 491
            +    PD+FT+   + A A L ++   K IH    ++     ++FV +AL+++Y+KCG 
Sbjct: 95  CTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQ 154

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI-S 550
           +G A  +F+         W  M+ GY  +   + A+ LF++M+       D+  + ++ +
Sbjct: 155 MGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLN 214

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM---PIE 607
             + +G  +   + F+ + +   I      +  M+         NEA +   +M     E
Sbjct: 215 LYAKTGCEKIAANLFSKMPEKDVIS-----WSTMIACYANNEAANEALNLFHEMIEKRFE 269

Query: 608 PGITVFGAMLGACKIHKNVELGEK 631
           P      + L AC + +N+E G+K
Sbjct: 270 PNSVTVVSALQACAVSRNLEEGKK 293


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/605 (42%), Positives = 398/605 (65%), Gaps = 2/605 (0%)

Query: 210 IVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++GF +N   E ++ +   M    G R D  T++++LPAVA +  L++G  +   A++ 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           GF S V++ T L+ +++KCG VE ARL+F  ++ ++++S N+MI+ +   G  E+++R+F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           +++L  G   ++ TI+  +   +  G       +H    +L + +  S++ +L ++Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            ++  A  +F +   KTL SWNAMI G  QNG  + A++ F  M+  N+ P+  T+ S++
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A++  +   +W+H+L+  + FE NV+V TALIDMYAKCG++  AR LFD+M E++  
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           TWN MI GYG HG G+ A++LF  ML    KP  +TFL  + ACSH+GLV+EG   F ++
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
             D+G EP+ +HY  MVD+LGRAG+L +A +FI+ MP+EPG  V+GA+LGAC IHK+  L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
              A+ +LFELDP+  GY+VL++NIY+    + + A VR + +KK L KTPGC+L+E+  
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEK 747
             H F SG   HPQSK IY  L+ L  ++  AG+  +T ++ HD+E+  +E  +  HSEK
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           LAIAFGL+++ PG+ I I KNLRVC DCHN TK++S +T R I+VRD +RFH FK+G+CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600

Query: 808 CGDYW 812
           CGDYW
Sbjct: 601 CGDYW 605



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 209/420 (49%), Gaps = 13/420 (3%)

Query: 109 MLKGYAKFASLDDAVSFLIRM------RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           M+ G+ K +  +D++     M      R+D    +      +L    ++ E++ G +I  
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIA-----VLPAVAELQELKLGMQILC 55

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I  GF   +  +TG++++++KCG++E A  +F  + ++DL+S N +++GF  NG  E 
Sbjct: 56  LAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETED 115

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           ++ L   +   G R    TIV ++P  +  G   +   +HG+ ++ G  S  +VSTAL  
Sbjct: 116 SVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTT 175

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +Y +   +  AR +FD    + + SWN+MI+   + G  + A+ +FQ M    V P  VT
Sbjct: 176 VYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVT 235

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L ACA +G L  G +VH L+   +  ++V ++ +LI MY+KC  +  A ++F  + 
Sbjct: 236 VTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMP 295

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  V+WNAMI GY  +G   EAL  F  M S ++KP   T +SV+ A +   +++    
Sbjct: 296 EKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDG 355

Query: 463 I-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           I H +V    FE        ++D+  + G +  A      M  E     W  ++     H
Sbjct: 356 IFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 139/280 (49%), Gaps = 4/280 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K G+       T L +++C+ N +  A ++F+   +K  A ++ M+ G  +    D A+
Sbjct: 159 VKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAI 218

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           S    M+ ++V P     T +L  C  +G +  G+ +H  +  N F  +++  T +++MY
Sbjct: 219 SLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMY 278

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A ++FD MPE++ V+WN +++G+  +G  + AL L   M     +   +T +
Sbjct: 279 AKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFL 338

Query: 244 SILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           S+L A ++ G ++ G  + H      GF+ +      +VD+  + G+++ A      M  
Sbjct: 339 SVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPV 398

Query: 303 R-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
                 W +++ A +   +   A    +K+ +  ++P N+
Sbjct: 399 EPGPPVWGALLGACMIHKDTNLAHVASEKLFE--LDPENI 436


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/702 (39%), Positives = 411/702 (58%), Gaps = 34/702 (4%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPER 202
           LK+      IR  K+IH  +I  G    LFA++ ++   A  + G I  A  +F+ + E 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           +L  WN+++ G + +    LAL    RM   G   +  T   +L + A + S   GK +H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG----------------------- 299
            + ++ GF S V + T+L++MYA+ G +  A+LVFD                        
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 300 --------MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
                   M  ++VVSWN+MIA Y + G  +EA+ +F+ M    V P   TI+  L ACA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
               L+ G  +   ++   L +++ + N+LI MYSKC  +  A ++F  +  + ++SWN 
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI GY       EAL  F +M +  ++P   T +S++P+ A L  I   KWIHA + ++ 
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
              +  + T+LID+YAKCG +  AR +FD M  + + +WN MI G   HG    A ELF+
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           KM     +PN+ITF+  +SAC H+GLV+ G  +F+S+ +DY I P   HYG M+DLLGRA
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRA 512

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G   EA   +Q M ++P   ++G++LGAC+ H  VELGE  A RLFEL+PD  G +VLL+
Sbjct: 513 GLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLS 572

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           NIYA A  WD +A++RT +  +G++K PGC+ +E+ N VH F  G   HPQS+ IY  LE
Sbjct: 573 NIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLE 632

Query: 712 TLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLR 770
            + +++K  G+V DT+ + +D+++  +E  LS HSEKLAIAFGL+++ PG+ I I KNLR
Sbjct: 633 EVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLR 692

Query: 771 VCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           VC +CH+ATK IS +  REII RD +RFH FK+G CSC DYW
Sbjct: 693 VCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/556 (30%), Positives = 280/556 (50%), Gaps = 41/556 (7%)

Query: 35  PSRIYR-HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLV--SLFCKYNSLSDA 91
           P R+ + HPS  LL  C S++  ++I   IIK+GL +     +KL+  S   +   +S A
Sbjct: 23  PYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
             +F  I +    ++++M++G +   S   A+ F +RM Y  V P  Y + +LLK C  +
Sbjct: 83  ISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKL 142

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI---------------------- 189
                GK+IH  ++  GF  D+F  T ++NMYA+ G++                      
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202

Query: 190 ---------EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
                    + A ++FD MP +D+VSWN ++AG+AQ G ++ AL L   M +     +  
Sbjct: 203 AGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNES 262

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TIVS+L A A   +L +G ++  +    G  S + +  AL+DMY+KCG ++TAR +FD M
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R+V+SWN MI  Y    + +EA+ +F++ML  GVEPT +T +  L +CA LG ++ G 
Sbjct: 323 LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           ++H  +++       S++ SLI +Y+KC  +  A  +F  ++ K+L SWNAMI G A +G
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHG 442

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
           + ++A   F KM S  I+P+  T V ++ A     ++    ++  ++V            
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY 502

Query: 480 TALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG---LGKAAVELFNKMLE 535
             +ID+  + G    A +L   M  +     W  ++     HG   LG+   E   ++  
Sbjct: 503 GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFEL-- 560

Query: 536 GPTKPNDITFLCAISA 551
            P  P     L  I A
Sbjct: 561 EPDNPGAYVLLSNIYA 576


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/747 (36%), Positives = 438/747 (58%), Gaps = 5/747 (0%)

Query: 64   IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA-LYHTMLKGYAKFASLDDA 122
            ++SG+ D+ L  +KLV ++ K   +  A RVF+ +P K +  +++ ++ GYAK A  +++
Sbjct: 337  VQSGI-DEAL-GSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEES 394

Query: 123  VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            +    +M    + P  +  + LLK    +   R G   HG L+  GF         +++ 
Sbjct: 395  LLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISF 454

Query: 183  YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
            YAK   I+ A  +FDRMP +D +SWN++++G   NG    A++L  RM  +G   D  T+
Sbjct: 455  YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTL 514

Query: 243  VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            +S+LPA A      +G+ VHGY+++ G     +++ AL+DMY+ C    +   +F  M  
Sbjct: 515  LSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQ 574

Query: 303  RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            +NVVSW +MI +Y   G  ++   + Q+M+  G++P    +   LH  A    L++G  V
Sbjct: 575  KNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSV 634

Query: 363  HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
            H    +  +   + + N+L+ MY  C+ ++ A  +F  +  K ++SWN +I GY++N   
Sbjct: 635  HGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFA 694

Query: 423  NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            NE+ + F  M  +  KP++ TM  ++PA+A +S +   + IHA  +R  F ++ +   AL
Sbjct: 695  NESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNAL 753

Query: 483  IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
            +DMY KCGA+  AR LFD + ++++ +W +MI GYG HG GK AV LF +M     +P+ 
Sbjct: 754  VDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDT 813

Query: 543  ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
             +F   + AC HSGL  EG  +F +++K+Y IEP + HY  +VDLL   G L EA++FI+
Sbjct: 814  ASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIE 873

Query: 603  KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
             MPIEP  +++ ++L  C+IH++V+L EK A+R+F+L+P+  GY+VLLANIYA A  W+ 
Sbjct: 874  SMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEA 933

Query: 663  LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
            + K++  +  +GL++  GCS +E++ +VH F + +  HP+  RI  FL+ +   ++  G+
Sbjct: 934  VKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGH 993

Query: 723  VPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
             P    S+    D V +  L  HS KLA+ FG+L+   G  I + KN +VC  CH A K+
Sbjct: 994  DPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKF 1053

Query: 782  ISLVTGREIIVRDMHRFHCFKNGVCSC 808
            IS +  REII+RD  RFH F+ G CSC
Sbjct: 1054 ISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 261/503 (51%), Gaps = 13/503 (2%)

Query: 52  SLKELRRILPLI-IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD--ALYHT 108
           SL+  RR   L+   +G     +   +LV  + K   L  A  VF+ +P ++    ++ +
Sbjct: 109 SLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTS 168

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++  YAK     + VS   +M+   V+P  +  + +LK    +G I  G+ IHG L   G
Sbjct: 169 LMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLG 228

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
                     ++ +Y++CG +E+A ++FD M  RD +SWN+ ++G+  NG+ + A+DL +
Sbjct: 229 LGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFS 288

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG----FDSIVN-----VSTA 279
           +M  EG     +T++S+LPA A +G   +GK VHGY+M++G     +S+ +     + + 
Sbjct: 289 KMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSK 348

Query: 280 LVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           LV MY KCG + +AR VFD M S+ NV  WN ++  Y +    EE++ +F++M + G+ P
Sbjct: 349 LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITP 408

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
               +   L     L     G+  H  L +L  GT  ++ N+LIS Y+K   +D A  +F
Sbjct: 409 DEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVF 468

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  +  +SWN++I G   NG  +EA+  F +M  +  + DS T++SV+PA A      
Sbjct: 469 DRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWF 528

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + +H   +++       +  AL+DMY+ C    +   +F  M +++V +W  MI  Y 
Sbjct: 529 VGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYT 588

Query: 519 THGLGKAAVELFNKMLEGPTKPN 541
             GL      L  +M+    KP+
Sbjct: 589 RAGLFDKVAGLLQEMVLDGIKPD 611



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 166/557 (29%), Positives = 267/557 (47%), Gaps = 20/557 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S+ E   I  L+ K GL +       L++L+ +   + DA +VF+ +  +    +++ + 
Sbjct: 213 SITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTIS 272

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY      D AV    +M  +           +L  C ++G    GK +HG  + +G   
Sbjct: 273 GYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLW 332

Query: 172 DLFAM---------TGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAGFAQNGFAE 221
           DL ++         + +V MY KCG +  A ++FD MP +  V  WN I+ G+A+    E
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE 392

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            +L L  +MHE G   D   +  +L  +  +   R G   HGY ++ GF +   V  AL+
Sbjct: 393 ESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALI 452

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
             YAK   ++ A LVFD M  ++ +SWNS+I+     G   EA+ +F +M  QG E  + 
Sbjct: 453 SFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDST 512

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  L ACA       G  VH    +  L  + S+ N+L+ MYS C        IF  +
Sbjct: 513 TLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNM 572

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +VSW AMI  Y + G  ++      +M    IKPD F + SV+   A    ++  K
Sbjct: 573 AQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGK 632

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H   IR+  EK + V  AL++MY  C  +  AR +FD +  + + +WN +I GY  + 
Sbjct: 633 SVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNN 692

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMD 579
               +  LF+ ML    KPN +T  C + A +    +E G  IH + +L++ +    + D
Sbjct: 693 FANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERGREIHAY-ALRRGF----LED 746

Query: 580 HY--GAMVDLLGRAGRL 594
            Y   A+VD+  + G L
Sbjct: 747 SYTSNALVDMYVKCGAL 763



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 228/485 (47%), Gaps = 6/485 (1%)

Query: 41  HPSALLLEVCTSLKELRRIL---PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H  + LL+  T L   R  L     ++K G   Q      L+S + K N + +A  VF+ 
Sbjct: 411 HALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDR 470

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +P +    +++++ G        +A+   +RM              +L  C        G
Sbjct: 471 MPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVG 530

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +HG  +  G   +      +++MY+ C       ++F  M ++++VSW  ++  + + 
Sbjct: 531 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA 590

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  +    L+  M  +G + D   + S+L   A   SL+ GK+VHGYA+R G + ++ V+
Sbjct: 591 GLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            AL++MY  C  +E ARLVFD + +++++SWN++I  Y       E+  +F  ML Q  +
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FK 709

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VT+   L A A +  LERG  +H    +     D   +N+L+ MY KC  +  A  +
Sbjct: 710 PNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVL 769

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F +L  K L+SW  MI GY  +G   +A+  F +MR   ++PD+ +  +++ A     + 
Sbjct: 770 FDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLT 829

Query: 458 RYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
               K+ +A+      E  +   T ++D+ +  G +  A    + M  E   + W  ++ 
Sbjct: 830 AEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLH 889

Query: 516 GYGTH 520
           G   H
Sbjct: 890 GCRIH 894


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/783 (36%), Positives = 450/783 (57%), Gaps = 6/783 (0%)

Query: 36   SRIYRHPSAL--LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
            S +Y  P     +L  CT ++  +   ++  L++K G   +      LV+L+ +  +   
Sbjct: 265  SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324

Query: 91   AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
            A +VF  +  + +  Y++++ G ++    D A+    +M  D + P       LL  C  
Sbjct: 325  AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384

Query: 151  VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
            VG +  GK+ H   I  G S D+     ++++Y KC  I+ A++ F      ++V WN +
Sbjct: 385  VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444

Query: 211  VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
            +  +        +  + T+M  EG   +  T  SIL   +++ ++ +G+ +H   ++ GF
Sbjct: 445  LVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF 504

Query: 271  DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
               V VS+ L+DMYAK G+++ A  +F  +K ++VVSW +MIA Y +     EA+ +F++
Sbjct: 505  QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE 564

Query: 331  MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
            M DQG+   N+    A+ ACA +  L +G  +H          D+S+ N+L+S+Y++C K
Sbjct: 565  MQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGK 624

Query: 391  VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
            V  A   F K+  K  +SWN++I G+AQ+G   EAL+ F +M     + +SFT    + A
Sbjct: 625  VRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSA 684

Query: 451  LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
             A ++ ++  K IHA++I++  +    V   LI +YAKCG +  A   F  M E++  +W
Sbjct: 685  AANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISW 744

Query: 511  NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
            N M+ GY  HG G  A+ LF  M +    PN +TF+  +SACSH GLV+EGI YF S+++
Sbjct: 745  NAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMRE 804

Query: 571  DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
             +G+ P  +HY  +VDLLGR+G L+ A  F+++MPI+P   V   +L AC +HKN+++GE
Sbjct: 805  VHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGE 864

Query: 631  KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
             AA+ L EL+P +   +VLL+N+YA    W    + R +M+ +G++K PG S +E+ N V
Sbjct: 865  FAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSV 924

Query: 691  HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLA 749
            H+F++G  KHP   +IY +L  L +     GY+P TNS ++D E   +      HSEKLA
Sbjct: 925  HAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLA 984

Query: 750  IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
            IAFGLL+ S  + IH+ KNLRVCGDCHN  KY+S ++ R I+VRD +RFH FK G+CSC 
Sbjct: 985  IAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCK 1044

Query: 810  DYW 812
            DYW
Sbjct: 1045 DYW 1047



 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 262/468 (55%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ L+ K   L+ A +VF+ +  +    +  ML G ++    ++AV    +M    V P 
Sbjct: 211 LIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPT 270

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y ++ +L  C  V   + G+++HG ++  GFSL+ +    +V +Y++ G    A ++F+
Sbjct: 271 PYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFN 330

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M +RD VS+N++++G +Q G+++ AL+L  +M  +  + D +T+ S+L A ++VG+L +
Sbjct: 331 AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK  H YA++AG  S + +  AL+D+Y KC  ++TA   F   ++ NVV WN M+ AY  
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGL 450

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             N  E+ +IF +M  +G+EP   T    L  C+ L  ++ G  +H  + +     +V +
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYV 510

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           ++ LI MY+K  K+D A  IF +L+ K +VSW AMI GYAQ+ +  EALN F +M+ + I
Sbjct: 511 SSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGI 570

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
             D+    S I A A +  +   + IHA    S +  ++ V  AL+ +YA+CG V  A  
Sbjct: 571 HSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYF 630

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
            FD +  +   +WN +I G+   G  + A+ LF++M +   + N  TF
Sbjct: 631 AFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF 678



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 275/540 (50%), Gaps = 8/540 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G C + +   +L+ L+  +  L  A  VF+ +P +  + ++ +L  +         
Sbjct: 94  ILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRV 153

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +    RM  + V P    Y  +L+ C  GDV      ++IH + I +G+   LF    ++
Sbjct: 154 LGLFRRMLQEKVKPDERTYAGVLRGCGGGDV-PFHCVEKIHARTITHGYENSLFVCNPLI 212

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           ++Y K G +  A K+FD + +RD VSW  +++G +Q+G  E A+ L  +MH  G      
Sbjct: 213 DLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPY 272

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
              S+L A   V   ++G+ +HG  ++ GF     V  ALV +Y++ G    A  VF+ M
Sbjct: 273 IFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R+ VS+NS+I+   + G  ++A+ +F+KM    ++P  VT+   L AC+ +G L  G 
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
             H    +  + +D+ +  +L+ +Y KC  +  A + F   + + +V WN M++ Y    
Sbjct: 393 QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            +NE+   F +M+ + I+P+ FT  S++   + L  +   + IH  V+++ F+ NV+V +
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            LIDMYAK G +  A  +F  + E+ V +W  MI GY  H     A+ LF +M +     
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572

Query: 541 NDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           ++I F  AISAC+    + +G  IH    +    G    +    A+V L  R G++ +A+
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVS---GYSDDLSVGNALVSLYARCGKVRDAY 629



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 248/525 (47%), Gaps = 7/525 (1%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           + ++FL  M    V      Y +LL  C   G    G ++HG+++  GF  ++     ++
Sbjct: 51  NGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLM 110

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           ++Y   G ++ A  +FD MP R L  WN ++  F     A   L L  RM +E  + D  
Sbjct: 111 DLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDER 170

Query: 241 TIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           T   +L             + +H   +  G+++ + V   L+D+Y K G + +A+ VFDG
Sbjct: 171 TYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDG 230

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++ R+ VSW +M++   + G  EEA+ +F +M   GV PT       L AC  +   + G
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H L+ +     +  + N+L+++YS+      A  +F+ +  +  VS+N++I G +Q 
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G  ++AL  F KM    +KPD  T+ S++ A + +  +   K  H+  I++    ++ + 
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+D+Y KC  + TA   F      +V  WNVM+  YG       + ++F +M     +
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN  T+   +  CS    V+ G    T + K  G +  +     ++D+  + G+L+ A  
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALK 529

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
             +++  E  +  + AM+     H+        A  LF+   D+G
Sbjct: 530 IFRRLK-EKDVVSWTAMIAGYAQHEKF----AEALNLFKEMQDQG 569



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 18/307 (5%)

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY         +     M ++GV   + T +  L  C   G    G  +H  + ++    
Sbjct: 42  AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +V +   L+ +Y     +D A  +F ++  + L  WN ++  +         L  F +M 
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161

Query: 434 SKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
            + +KPD  T   V+       V     + IHA  I   +E ++FV   LID+Y K G +
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFL 221

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            +A+ +FD + +R   +W  M+ G    G  + AV LF +M      P    F   +SAC
Sbjct: 222 NSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281

Query: 553 SHSGL--VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           +      V E +H    LK+ + +E  + +  A+V L  R G      +FI      P  
Sbjct: 282 TKVEFYKVGEQLHGLV-LKQGFSLETYVCN--ALVTLYSRLG------NFI------PAE 326

Query: 611 TVFGAML 617
            VF AML
Sbjct: 327 QVFNAML 333


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/754 (37%), Positives = 448/754 (59%), Gaps = 5/754 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD-ALYHTMLKGYAKFASLD 120
           L +KSGL    L    LV ++ K   L  A RVFE + D  D A +++ + G  +     
Sbjct: 188 LAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFL 247

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +A+    RM+ D  +   Y    +L+VC ++ ++  G+E+H  L+  G   ++     ++
Sbjct: 248 EALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALL 306

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MYA+CG ++ A ++F  + ++D +SWN++++ + QN     A+D    M + G   D  
Sbjct: 307 VMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHA 366

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            IVS+L AV ++G L  G+ VH YA++   DS + ++  L+DMY KC  VE +  VFD M
Sbjct: 367 CIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRM 426

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           + ++ VSW ++IA Y +     EA+  F+    +G++   + +   L AC+ L  +    
Sbjct: 427 RIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLK 486

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH    +  L  D+ + N +I +Y +C +V  A +IF  L  K +V+W +M+  +A+NG
Sbjct: 487 QVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            ++EA+  F KM +  I+PDS  +V ++ A+A LS +   K IH  +IR  F     V++
Sbjct: 546 LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVS 605

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +L+DMY+ CG++  A  +FD    + V  W  MI+  G HG GK A+ +F +MLE    P
Sbjct: 606 SLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSP 665

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + ++FL  + ACSHS LV+EG  Y   +   Y ++P  +HY  +VDLLGR+G+  EA+ F
Sbjct: 666 DHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKF 725

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+ MP+EP   V+ A+LGAC+IHKN EL   A ++L EL+PD  G +VL++N++A    W
Sbjct: 726 IKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKW 785

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           + + ++RT M ++GL+K P CS +E+ N VH+F +    H  S+ I+  L  + ++++  
Sbjct: 786 NNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRRE 845

Query: 721 G-YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           G YV DT+ + HDV +  + +LL  HSE+LAI+FGL++++ G+ + I KNLRVCGDCH  
Sbjct: 846 GQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEF 905

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TK +S +  REI+VRD +RFH F  G CSCGD+W
Sbjct: 906 TKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/590 (29%), Positives = 299/590 (50%), Gaps = 15/590 (2%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D     TKL+ ++ K   L DA R+F+ +P +    ++ ++          +AV     M
Sbjct: 91  DAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAM 150

Query: 130 RYDD----VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
           R  +     AP       +LK CG  G+ R G E+HG  + +G          +V MYAK
Sbjct: 151 RASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAK 210

Query: 186 CGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           CG ++ A ++F+ M + RD+ SWN+ ++G  QNG    ALDL  RM  +G   +  T V 
Sbjct: 211 CGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVG 270

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L   A +  L  G+ +H   ++ G +  +  +  LV MYA+CG V++A  VF  +  ++
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKD 329

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
            +SWNSM++ YV+     EA+  F +M+  G  P +  I+  L A   LG L  G  VH 
Sbjct: 330 YISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHA 389

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              + +L +D+ + N+L+ MY KC  V+ +A +F +++ K  VSW  +I  YAQ+ R +E
Sbjct: 390 YAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSE 449

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A+  F   + + IK D   M S++ A + L  I   K +H+  IR+    ++ +   +ID
Sbjct: 450 AIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIID 508

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y +CG V  A  +F+M++++ + TW  M++ +  +GL   AV LF KML    +P+ + 
Sbjct: 509 IYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVA 568

Query: 545 FLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            +  + A +    + +G  IH F  ++  + +E  +    ++VD+    G +N A     
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFL-IRGKFPVEGAV--VSSLVDMYSGCGSMNYALKVFD 625

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLL 650
           +   +  + ++ AM+ A  +H + +       R+ E  + PD   +  LL
Sbjct: 626 EAKCKD-VVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 235/477 (49%), Gaps = 14/477 (2%)

Query: 89  SDAARVFEPIPDKL--DALYHTMLKGYAKFASLDDAVSFLI-RMRYDDVAPVVYNYTYLL 145
           + AA  F P P +    A     L+   K   L +A+  L  R       P   +Y ++L
Sbjct: 3   TTAALPFHPTPRRKLPPASAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVL 62

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLD---LFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +      +  G+++H   +  G   D    F  T ++ MY KCG++ +A+++FD MP R
Sbjct: 63  DLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPAR 122

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEE----GRRGDFITIVSILPAVANVGSLRIG 258
            + SWN ++     +G A  A+ +   M       G   D  T+ S+L A    G  R G
Sbjct: 123 TVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCG 182

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVE 317
             VHG A+++G D    V+ ALV MYAKCG +++A  VF+ M+  R+V SWNS I+  V+
Sbjct: 183 SEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQ 242

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F++M   G    + T +  L  CA+L  L  G  +H  L  LK GT+ ++
Sbjct: 243 NGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAAL--LKCGTEFNI 300

Query: 378 T-NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
             N+L+ MY++C  VD A  +F ++  K  +SWN+M+  Y QN    EA+++F +M    
Sbjct: 301 QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG 360

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
             PD   +VS++ A+  L  +   + +HA  ++   + ++ +   L+DMY KC +V  + 
Sbjct: 361 FNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSA 420

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            +FD M  +   +W  +I  Y        A+  F    +   K + +     + ACS
Sbjct: 421 RVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 171/325 (52%), Gaps = 9/325 (2%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGF---DSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +L  VA   ++  G+ +H +A+  G    D    ++T L+ MY KCGR+  A  +FDGM 
Sbjct: 61  VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ----GVEPTNVTIMEALHACADLGDLE 357
           +R V SWN++I A +  G   EA+ +++ M       G  P   T+   L AC   GD  
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGY 416
            G  VH L  +  L     + N+L+ MY+KC  +D A  +F  ++ G+ + SWN+ I G 
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QNG   EAL+ F +M+S     +S+T V V+   AEL+ + + + +HA +++   E N+
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI 300

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
               AL+ MYA+CG V +A  +F  + ++   +WN M+  Y  + L   A++ F +M++ 
Sbjct: 301 -QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359

Query: 537 PTKPNDITFLCAISACSHSGLVEEG 561
              P+    +  +SA  H G +  G
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLING 384



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 163/305 (53%), Gaps = 1/305 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R +    +K  L         L+ ++ K  S+  +ARVF+ +  K    + T++  YA+ 
Sbjct: 385 REVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQS 444

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
           +   +A+      + + +         +L+ C  +  I   K++H   I NG  LDL   
Sbjct: 445 SRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILK 503

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++++Y +CG++  A  +F+ + ++D+V+W ++V  FA+NG    A+ L  +M   G +
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D + +V IL A+A + SL  GK +HG+ +R  F     V ++LVDMY+ CG +  A  V
Sbjct: 564 PDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKV 623

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD  K ++VV W +MI A    G+ ++A+ IF++ML+ GV P +V+ +  L+AC+    +
Sbjct: 624 FDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLV 683

Query: 357 ERGIF 361
           + G F
Sbjct: 684 DEGKF 688



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 4/185 (2%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL + + I   +I+     +    + LV ++    S++ A +VF+    K   L+  M+
Sbjct: 580 SSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMI 639

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
                      A+    RM    V+P   ++  LL  C     +  GK  +  ++V+ + 
Sbjct: 640 NATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGK-FYLDMMVSKYK 698

Query: 171 LDLFA--MTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLV 227
           L  +      VV++  + GQ EEAYK    MP E   V W  ++     +   ELA+   
Sbjct: 699 LQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIAT 758

Query: 228 TRMHE 232
            ++ E
Sbjct: 759 DKLLE 763


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 303/828 (36%), Positives = 462/828 (55%), Gaps = 25/828 (3%)

Query: 8   QLSVFTNSTP----------TQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL- 56
           Q   FTN  P             LH+   TL    +  S       +L L+ C   +   
Sbjct: 24  QFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFD 83

Query: 57  --RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGY 113
               +   + +S L    +    L+SL+ K      A  +F  +    D + +  M+  +
Sbjct: 84  IGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCF 143

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLD 172
           A       A+   + M  +   P  Y +    + C     +  G  I G +I  G+   D
Sbjct: 144 ANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSD 203

Query: 173 LFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +    G+++M+ K  G +  A+K+F++MPER+ V+W  ++    Q G+A  A+DL   M 
Sbjct: 204 VCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMI 263

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---G 288
             G   D  T+  ++ A AN+  L +G+ +H  A+R G      V   L++MYAKC   G
Sbjct: 264 FSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDG 323

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
            +  AR +FD +   NV SW +MI  YV+ GG  EEA+ +F+ M+   V P + T    L
Sbjct: 324 SMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTL 383

Query: 348 HACADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            ACA+L  L  G  +F H +  +L   +   + NSLISMY++  ++D A   F  L  K 
Sbjct: 384 KACANLAALRIGEQVFTHAV--KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           L+S+N +I  YA+N    EAL  F ++  + +   +FT  S++   A +  I   + IHA
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            VI+S  + N  V  ALI MY++CG + +A  +F+ M +R+V +W  +I G+  HG    
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ELF+KMLE   +PN++T++  +SACSH GLV EG  +F S+  ++G+ P M+HY  +V
Sbjct: 562 ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIV 621

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           D+LGR+G L+EA  FI  MP +    V+   LGAC++H N+ELG+ AA  + E +P +  
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPA 681

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            ++LL+N+YA+ S WD+++ +R  M++K L K  GCS VE++N+VH FY G T HP++  
Sbjct: 682 AYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY  L+ L  +IK  GYVP+ + + HDVE+  +E LL  HSEK+A+AFGL+++S    I 
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIR 801

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + KNLR+CGDCH+A KYIS+ TGREIIVRD +RFH  K+G CSC +YW
Sbjct: 802 VFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/807 (34%), Positives = 461/807 (57%), Gaps = 11/807 (1%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCD 70
           N    + +H     +S   + P   +  P   L++ CT   ++   + +  + +K GL  
Sbjct: 187 NELYDEAIHTFLELISVTEFQPDN-FTFPC--LIKACTGKCDIHLGKSVHGMAVKMGLIM 243

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM- 129
                  +++L+ K   L +A  +F+ +P++    ++++++G+++     +A      + 
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303

Query: 130 -RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
              D + P V     LL VC   G +  G  IHG  +  G   +L     +++MY+KCG 
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSIL 246
           + EA  +F ++  + +VSWN+++  +++ GF     DL+ +M   EE    + +TI+++L
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLL 423

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           PA      L   +A+HGY++R  F     ++ A +  YAKCG +  A  VF GM +++V 
Sbjct: 424 PACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS 483

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN++I  + + G+P +A+  + +M   G+ P + +I+  L AC  LG L+ G  +H  +
Sbjct: 484 SWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +  L  +  +  SL+S+Y  C K       F ++  K  V WNAM+ GY+QN   NEAL
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEAL 603

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + F +M S  ++PD   + S++ A ++LS +   K +H   +++   ++ FV  +L+DMY
Sbjct: 604 SLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMY 663

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AK G +G ++ +F+ +N + V +WNVMI G+G HG G  AVELF  M     +P+  TFL
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + AC H+GLV EG++Y   ++  Y +EP ++HY  ++D+LGRAGRLNEA +FI +MP 
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP   ++ ++L +   + ++E+GEK A +L  L+ ++   ++LL+N+YA A  WD +  V
Sbjct: 784 EPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMV 843

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R  M+   LQK  GCS +EL+ +V+SF +G   +P S  I      L  +I   GY PD 
Sbjct: 844 RQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDC 903

Query: 727 NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
           + + H++E+  +  +L  HSEK+AI FG LN+  G+T+ I KNLR+C DCHNA KYIS  
Sbjct: 904 SCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKA 963

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
             REI++RD  RFH FK G+CSCGDYW
Sbjct: 964 AKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 181/586 (30%), Positives = 312/586 (53%), Gaps = 23/586 (3%)

Query: 30  QRAYIPSRIY-----RHPSALLLEVCTSLK--ELRRILP--LIIKSGLCDQHLFQTKLVS 80
           QRA+  +  Y     +    +LL+ C   K  E+ R L   L + S      +  T+L++
Sbjct: 92  QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV-SFLIRMRYDDVAPVVY 139
           ++       ++  VF+ + +K    ++ ++ GY +    D+A+ +FL  +   +  P  +
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            +  L+K C    +I  GK +HG  +  G  +DLF    ++ +Y KCG ++EA ++FD+M
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHE--EGRRGDFITIVSILPAVANVGSLRI 257
           PE++L+SWN+++ GF++NGF   A      + E  +G   D  T+V++LP  +  G++ +
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +HG A++ G    + V  AL+DMY+KCG +  A ++F  +++++VVSWNSMI AY  
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 318 GGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            G   E   + +KM   ++ +E   VTI+  L AC +  +L     +H    +       
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+ I+ Y+KC  +  A  +F  +  K++ SWNA+I G+AQNG   +AL+++ +M   
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I PD F++VS++ A   L +++Y K IH  V+R+  E N FV  +L+ +Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH- 554
           R  F+ M +++   WN M+ GY  + L   A+ LF +ML    +P++I     + ACS  
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 555 --SGLVEEGIHYF---TSLKKDYGIE-PVMDHYGAMVDLLGRAGRL 594
              GL +E +H F    SL +D  +   +MD Y A    LG + R+
Sbjct: 632 SALGLGKE-VHCFALKNSLMEDNFVACSLMDMY-AKSGFLGHSQRI 675


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 275/705 (39%), Positives = 413/705 (58%), Gaps = 37/705 (5%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPER 202
           L +     E ++ K+IH Q++  G   D F+ + ++   A      ++ A ++FD++P  
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +L +WNT++  +A +     +L +  RM H+     D  T   ++ A + +  L  GKA 
Sbjct: 99  NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           HG  ++    S V +  +L+  YAKCG +     VF  +  R+VVSWNSMI A+V+GG P
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EEA+ +FQ+M  Q V+P  +T++  L ACA   D E G +VH  +++ ++G  ++++N++
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA------------------------ 417
           + MY+KC  V+ A  +F K+  K +VSW  M++GYA                        
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338

Query: 418 -------QNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
                  Q G+  EAL  F +++ SK  KPD  T+VS + A A+L  +    WIH  + +
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
              + N  + T+LIDMY KCG +  A  +F  +  + V  W+ MI G   HG GK A+ L
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIAL 458

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F+KM E   KPN +TF   + ACSH GLVEEG  +F  ++  YG+ P + HY  MVD+LG
Sbjct: 459 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILG 518

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG L EA + I+KMP+ P  +V+GA+LGAC IH+NV L E+A ++L EL+P   G +VL
Sbjct: 519 RAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVL 578

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYA A  WD+++ +R +M   GL+K PGCS +E+   VH F  G   HP +K+IY  
Sbjct: 579 LSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAK 638

Query: 710 LETLIDEIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
           L+ ++  ++  GYVP+ + +  +  E+ V+E  L  HSEKLAIAFGL+++     I I K
Sbjct: 639 LDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVK 698

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVCGDCH+  K +S +  REI++RD +RFH F+ G CSC DYW
Sbjct: 699 NLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/718 (38%), Positives = 429/718 (59%), Gaps = 5/718 (0%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIR 155
           +PD+    + T+++GY +   LD+ V    R+  +  ++ P V+  T +LK+   V    
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVF--TTILKLLVSVECAE 58

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
               +H  +   G   + F  T +++ YA CG +  A + FD +  +D+VSW  +VA +A
Sbjct: 59  LAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           +N   + +L L   M   G   +  T   +L A   + +  +GK+VHG  ++  ++  + 
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V   L+D+Y K G       VF+ M   +V+ W+ MI+ Y +     EA+ +F +M    
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V P   T    L +CA + +L+ G  VH  + ++ L  +V ++N+L+ +Y+KC ++D + 
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F +L  +  V+WN MI+GY Q+G  ++AL+ +  M    ++    T  SV+ A A L+
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +     IH+L +++ ++K+V V  ALIDMYAKCG++  AR +FDM++ER   +WN MI 
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GY  HGL   A++ F  M E    PN +TF+  +SACS++GL++ G +YF S+ +DYGIE
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P M+HY  MV LLGR+G L++A   I+++P+EP + V+ A+LGAC IH +V+LG  +A +
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQ 538

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           + ++DP +   HVLL+NIYA    W+ +A VR  M+ KG++K PG S +E +  VH F  
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G T HP  K I   LE L  + + AGYVPD N++  DVED  ++  L  HSE+LA+AFGL
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +     I I KNLR+C DCH+A K IS +  R+II+RDM+RFH F++G+CSCGDYW
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 237/451 (52%), Gaps = 10/451 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+  +    S++ A + F+ I  K    +  M+  YA+     D++     MR     
Sbjct: 80  TALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFN 139

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + +  +LK C  +     GK +HG ++   + +DL+   G++++Y K G   +  ++
Sbjct: 140 PNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRV 199

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ MP+ D++ W+ +++ +AQ+  +  A++L  +M       +  T  S+L + A++ +L
Sbjct: 200 FEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENL 259

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           ++GK VH + ++ G D  V VS AL+D+YAKCGR++ +  +F  + +RN V+WN+MI  Y
Sbjct: 260 QLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGY 319

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+ G+ ++A+ +++ ML+  V+ + VT    L ACA L  +E G  +H L  +     DV
Sbjct: 320 VQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDV 379

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+LI MY+KC  +  A  +F  L  +  +SWNAMI GY+ +G V EAL  F  M+  
Sbjct: 380 VVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQET 439

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAK-WIHALV----IRSCFEKNVFVMTALIDMYAKCG 490
              P+  T VS++ A +   ++   + +  ++V    I  C E      T ++ +  + G
Sbjct: 440 ECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH----YTCMVWLLGRSG 495

Query: 491 AVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            +  A  L + +  E +V  W  ++     H
Sbjct: 496 HLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 158/321 (49%), Gaps = 9/321 (2%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           +RA++    +   S  +L+ C S++ L   +++   ++K GL         L+ ++ K  
Sbjct: 235 RRAFVLPNQFTFAS--VLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            L ++ ++F  +P++ +  ++TM+ GY +    D A+S    M    V      Y+ +L+
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C  +  +  G +IH   +   +  D+     +++MYAKCG I+ A  +FD + ERD +S
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEIS 412

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN +++G++ +G    AL     M E     + +T VSIL A +N G L IG+      +
Sbjct: 413 WNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMV 472

Query: 267 RA-GFDSIVNVSTALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           +  G +  +   T +V +  + G ++ A +L+ +     NV  W +++ A V   + +  
Sbjct: 473 QDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLG 532

Query: 325 MRIFQKML--DQGVEPTNVTI 343
           +   Q++L  D   E T+V +
Sbjct: 533 IMSAQQILQIDPQDEATHVLL 553


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/807 (34%), Positives = 460/807 (57%), Gaps = 11/807 (1%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCD 70
           N    + +H     +S   + P   +  P   L++ CT   ++   + +  + +K GL  
Sbjct: 187 NELYDEAIHTFLELISVTEFQPDN-FTFPC--LIKACTGKCDIHLGKSVHGMAVKMGLIM 243

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM- 129
                  +++L+ K   L +A  +F+ +P++    ++++++G+++     +A      + 
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303

Query: 130 -RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
              D + P V     LL VC   G +  G  IHG  +  G   +L     +++MY+KCG 
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSIL 246
           + EA  +F ++  + +VSWN+++  +++ GF     DL+ +M   EE    + +TI+++L
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLL 423

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           PA      L   +A+HGY++R  F     ++ A +  YAKCG +  A  VF GM +++V 
Sbjct: 424 PACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS 483

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN++I  + + G+P +A+  + +M   G+ P + +I+  L AC  LG L+ G  +H  +
Sbjct: 484 SWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +  L  +  +  SL+S+Y  C K       F  +  K  V WNAM+ GY+QN   NEAL
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEAL 603

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + F +M S  ++PD   + S++ A ++LS +   K +H   +++   ++ FV  +L+DMY
Sbjct: 604 SLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMY 663

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AK G +G ++ +F+ +N + V +WNVMI G+G HG G  AVELF  M     +P+  TFL
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + AC H+GLV EG++Y   ++  Y +EP ++HY  ++D+LGRAGRLNEA +FI +MP 
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP   ++ ++L +   + ++E+GEK A +L  L+ ++   ++LL+N+YA A  WD +  V
Sbjct: 784 EPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMV 843

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R  M+   LQK  GCS +EL+ +V+SF +G   +P S  I      L  +I   GY PD 
Sbjct: 844 RQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDC 903

Query: 727 NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
           + + H++E+  +  +L  HSEK+AI FG LN+  G+T+ I KNLR+C DCHNA KYIS  
Sbjct: 904 SCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKA 963

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
             REI++RD  RFH FK G+CSCGDYW
Sbjct: 964 AKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 181/586 (30%), Positives = 312/586 (53%), Gaps = 23/586 (3%)

Query: 30  QRAYIPSRIY-----RHPSALLLEVCTSLK--ELRRILP--LIIKSGLCDQHLFQTKLVS 80
           QRA+  +  Y     +    +LL+ C   K  E+ R L   L + S      +  T+L++
Sbjct: 92  QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV-SFLIRMRYDDVAPVVY 139
           ++       ++  VF+ + +K    ++ ++ GY +    D+A+ +FL  +   +  P  +
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            +  L+K C    +I  GK +HG  +  G  +DLF    ++ +Y KCG ++EA ++FD+M
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHE--EGRRGDFITIVSILPAVANVGSLRI 257
           PE++L+SWN+++ GF++NGF   A      + E  +G   D  T+V++LP  +  G++ +
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +HG A++ G    + V  AL+DMY+KCG +  A ++F  +++++VVSWNSMI AY  
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 318 GGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            G   E   + +KM   ++ +E   VTI+  L AC +  +L     +H    +       
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+ I+ Y+KC  +  A  +F  +  K++ SWNA+I G+AQNG   +AL+++ +M   
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I PD F++VS++ A   L +++Y K IH  V+R+  E N FV  +L+ +Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH- 554
           R  F+ M +++   WN M+ GY  + L   A+ LF +ML    +P++I     + ACS  
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 555 --SGLVEEGIHYF---TSLKKDYGIE-PVMDHYGAMVDLLGRAGRL 594
              GL +E +H F    SL +D  +   +MD Y A    LG + R+
Sbjct: 632 SALGLGKE-VHCFALKNSLMEDNFVACSLMDMY-AKSGFLGHSQRI 675


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/765 (36%), Positives = 446/765 (58%), Gaps = 9/765 (1%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           +C +L   +++     K GL       + LV L+ K   +  A+++F  +P++ D  ++ 
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L GYA+   +   +     M   DV    +  T +LK C +   +++G+ IH  +I  G
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +  + F   G+V+MY+KCG   +A  +F  + + D+V W+ ++    Q G +E ++ L  
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404

Query: 229 RMHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            M    R GD +    TI S+L A  N G+L+ G+++H    + GF++ V VS ALV MY
Sbjct: 405 LM----RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G V     +++ M  R+++SWN+ ++   + G  +  + IF  ML++G  P   T +
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +C+ L D+  G  VH  + + +L  +  +  +LI MY+KC  ++ A   F++L  +
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            L +W  +I  YAQ  +  +ALNYF +M+ + +KP+ FT+   +   + L+ +   + +H
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLH 640

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           ++V +S    ++FV +AL+DMYAKCG +  A ALF+ +  R    WN +I GY  +G G 
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGN 700

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+  F  ML+    P+ +TF   +SACSH GLVEEG  +F S+ +D+GI P +DH   M
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VD+LGR G+ +E  DFIQKM +     ++  +LGA K+H N+ LGEKAAN+LFEL P+E 
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEE 820

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             ++LL+NI+A    WD + +VR++M  KG++K PGCS VE   +VH+F S    HPQ +
Sbjct: 821 SSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQ 880

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I+  L+ L  E+ +  YVP T  + H+V +  ++  L  HSE+LA+ F L+++S    I
Sbjct: 881 EIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKI 940

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
            I KNLR+C DCH+  K+IS +T +EI+VRD+ RFH FKNG CSC
Sbjct: 941 RIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 272/756 (35%), Positives = 450/756 (59%), Gaps = 9/756 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD-ALYHTMLKGYAKFASLD 120
           L +K GL         L++++ K   L  A RVFE + D  D A +++M+ G  +     
Sbjct: 189 LAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFL 248

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            A+     M+   ++   Y    +L+VC ++ ++  G+E+H  L+ +G  +++     ++
Sbjct: 249 QALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI-QCNALL 307

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY KCG+++ A ++F  + E+D +SWN++++ + QNG    A++ ++ M   G + D  
Sbjct: 308 VMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHA 367

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            IVS+  AV ++G L  GK VH YA++   DS   V   L+DMY KC  +E +  VFD M
Sbjct: 368 CIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRM 427

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD--LER 358
           + ++ +SW ++I  Y +     EA+ IF++   +G++   + I   L AC+ L    L +
Sbjct: 428 RIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAK 487

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
            +  + + + L    D+ + N +I +Y +C +V  +  +F  ++ K +V+W +MI  YA 
Sbjct: 488 QLHCYAIRNGL---LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           +G +NEAL  F +M+S +++PDS  +VS++ A+  LS +   K +H  +IR  F     +
Sbjct: 545 SGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI 604

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
           +++L+DMY+ CG++  A  +F+ +  + +  W  MI+  G HG GK A++LF +ML+   
Sbjct: 605 VSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGV 664

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+ ++FL  + ACSHS LV EG  Y   +   Y +EP  +HY  +VDLLGR+G+  EA+
Sbjct: 665 TPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAY 724

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           +FI+ MP++P   V+ ++LGAC++HKN EL   AANRL EL+PD  G +VL++N++A   
Sbjct: 725 EFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMG 784

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI- 717
            W+   +VR  + ++GL+K P CS +E+ N VH+F +    H  ++RI   L  + + + 
Sbjct: 785 KWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLR 844

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           K  GY  DT S+ HDV +  + ++L  HSE+LAI+FGL+N+ PG  + I KNLRVCGDCH
Sbjct: 845 KEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCH 904

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             TK +S +  R+I+VRD +RFH F  G CSCGD+W
Sbjct: 905 EFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/590 (28%), Positives = 298/590 (50%), Gaps = 16/590 (2%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D     TKL+ ++ K   ++DA  +F+ +  +    ++ ++  Y    S  +A+     M
Sbjct: 93  DDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAM 152

Query: 130 RYD---DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           R      VAP       +LK  G  G+ R G E+HG  + +G     F    ++ MYAKC
Sbjct: 153 RLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKC 212

Query: 187 GQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           G ++ A ++F+ M + RD+ SWN++++G  QNG    ALDL   M       +  T V +
Sbjct: 213 GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGV 272

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS-TALVDMYAKCGRVETARLVFDGMKSRN 304
           L     +  L +G+ +H   +++G  S VN+   AL+ MY KCGRV++A  VF  +  ++
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKD 330

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
            +SWNSM++ YV+ G   EA+    +ML  G +P +  I+    A   LG L  G  VH 
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              + +L +D  + N+L+ MY KC+ ++ +A +F +++ K  +SW  +I  YAQ+ R  E
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F + + + IK D   + S++ A + L  I  AK +H   IR+    ++ V   +ID
Sbjct: 451 ALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIID 509

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y +CG V  +  +F+ + ++ + TW  MI+ Y   GL   A+ LF +M     +P+ + 
Sbjct: 510 IYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVA 569

Query: 545 FLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            +  + A      + +G  +H F  +++++ +E  +    ++VD+    G L+ A     
Sbjct: 570 LVSILGAIGGLSSLAKGKEVHGFL-IRRNFHMEEAI--VSSLVDMYSGCGSLSGALKVFN 626

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLL 650
            +  +  + ++ AM+ A  +H + +       R+ +  + PD   +  LL
Sbjct: 627 AVKCKD-MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 189/377 (50%), Gaps = 12/377 (3%)

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           YK F   P        T +    + G    AL L+T     GR         +L  VA  
Sbjct: 13  YKKFSTTPPSISPPDPTSLKQLCKEGNLRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAK 71

Query: 253 GSLRIGKAVHGYAMRAGF----DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            ++  G  VH +A+  G     D  +  +T L+ MY KCGRV  ARL+FDGM SR V SW
Sbjct: 72  KAVAQGVQVHAHAVATGSLEGDDGFL--ATKLLFMYGKCGRVADARLLFDGMSSRTVFSW 129

Query: 309 NSMIAAYVEGGNPEEAMRIFQKM---LDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           N++I AY+  G+  EA+ +++ M      GV P   T+   L A    GD   G  VH L
Sbjct: 130 NALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGL 189

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNE 424
             +  L     + N+LI+MY+KC  +D A  +F  +  G+ + SWN+MI G  QNG   +
Sbjct: 190 AVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQ 249

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL+ F  M+   +  +S+T V V+    EL+ +   + +HA +++S  E N+    AL+ 
Sbjct: 250 ALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLV 308

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY KCG V +A  +F  ++E+   +WN M+  Y  +GL   A+E  ++ML G  +P+   
Sbjct: 309 MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHAC 368

Query: 545 FLCAISACSHSGLVEEG 561
            +   SA  H G +  G
Sbjct: 369 IVSLSSAVGHLGWLLNG 385



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 4/185 (2%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL + + +   +I+     +    + LV ++    SLS A +VF  +  K   L+  M+
Sbjct: 581 SSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMI 640

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
                      A+    RM    V P   ++  LL  C     +  GK  +  ++++ + 
Sbjct: 641 NATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGK-CYLDMMMSTYR 699

Query: 171 LDLFA--MTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLV 227
           L+ +      VV++  + GQ EEAY+    MP +   V W +++     +   ELA+   
Sbjct: 700 LEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAA 759

Query: 228 TRMHE 232
            R+ E
Sbjct: 760 NRLLE 764


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/759 (36%), Positives = 448/759 (59%), Gaps = 4/759 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF-EPIPDKLDALYHTMLKGYAKF 116
           ++  + + +GL         LV+++  +  + +A RVF E   D+    ++ M+  + K 
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DAV     M +  V P  + ++ ++  C    ++  G+++H  ++  G+  D+F  
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY+K G I  A  +F ++P+ D+VSWN  ++G   +G  + AL+L+ +M   G  
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 237 GDFITIVSILPAVANVGSLRIG--KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            +  T+ SIL A A  G+      + +HG+ ++A  DS   +  ALVDMYAK G ++ AR
Sbjct: 301 PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDAR 360

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VF+ +  ++++ WN++I+    GG   E++ +F +M  +G +    T+   L + A L 
Sbjct: 361 KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            +     VH L +++   +D  + N LI  Y KC  +  A  +F +     ++++ +MI 
Sbjct: 421 AISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMIT 480

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
             +Q     +A+  F +M  K ++PD F + S++ A A LS     K +HA +I+  F  
Sbjct: 481 ALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT 540

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           +VF   AL+  YAKCG++  A   F  + ++ V +W+ MI G   HG GK A+++F +M+
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMV 600

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +    PN IT    + AC+H+GLV+E   YF+S+K+ +GI+   +HY  M+DLLGRAG+L
Sbjct: 601 DERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKL 660

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           ++A + +  MP E    V+GA+L A ++H++ ELG+ AA +LF L+P++ G HVLLAN Y
Sbjct: 661 DDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTY 720

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           A+A MWD++AKVR +M+   ++K P  S VELK+ VH+F  G   HP+++ IY  LE L 
Sbjct: 721 ASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELG 780

Query: 715 DEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
           D +  AGYVP+    +HDV+   +E LLS HSE+LA+AF L+++  G+ I ++KNLR+C 
Sbjct: 781 DLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICR 840

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH A K+IS +  REII+RD++RFH F +G CSCGDYW
Sbjct: 841 DCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 265/564 (46%), Gaps = 10/564 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++KSGL   H F+  L+S + K      A RVF+  PD     + +++  Y+  A   +A
Sbjct: 30  LLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREA 87

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           ++    MR   V    +    +LK   D G    G ++H   +  G S D+F    +V M
Sbjct: 88  LAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVANALVAM 144

Query: 183 YAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           Y   G ++EA ++FD    +R+ VSWN +++ F +N     A++L   M   G R +   
Sbjct: 145 YGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFG 204

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
              ++ A      L  G+ VH   +R G+D  V  + ALVDMY+K G +  A LVF  + 
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VVSWN+ I+  V  G+ + A+ +  +M   G+ P   T+   L ACA  G     + 
Sbjct: 265 KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALG 324

Query: 362 --VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  + +    +D  +  +L+ MY+K   +D A  +F  +  K L+ WNA+I G +  
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   E+L+ FC+MR +    +  T+ +V+ + A L  I     +HAL  +  F  +  V+
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVV 444

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             LID Y KC  +  A  +F+  +  ++  +  MI        G+ A++LF +ML    +
Sbjct: 445 NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLE 504

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+       ++AC+     E+G      L K   +  V     A+V    + G + +A  
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG-NALVYTYAKCGSIEDADL 563

Query: 600 FIQKMPIEPGITVFGAMLGACKIH 623
               +P + G+  + AM+G    H
Sbjct: 564 AFSGLP-DKGVVSWSAMIGGLAQH 586



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 265/611 (43%), Gaps = 60/611 (9%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  IH  L+ +G  L  F    +++ Y+KC     A ++FD  P+   VSW+++V  ++ 
Sbjct: 23  GAHIHAHLLKSGL-LHAF-RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSN 80

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N     AL     M   G R +   +  +L    + G   +G  VH  A+  G    + V
Sbjct: 81  NALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFV 137

Query: 277 STALVDMYAKCGRVETARLVFD-GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + ALV MY   G V+ AR VFD   + RN VSWN M++A+V+     +A+ +F +M+  G
Sbjct: 138 ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSG 197

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V P        ++AC    DLE G  VH ++ +     DV   N+L+ MYSK   +  AA
Sbjct: 198 VRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAA 257

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP--ALAE 453
            +F K+    +VSWNA I G   +G    AL    +M+S  + P+ FT+ S++   A A 
Sbjct: 258 LVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAG 317

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
                  + IH  +I++C + + ++  AL+DMYAK G +  AR +F+ +  + +  WN +
Sbjct: 318 AGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNAL 377

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITF---------LCAISACSHSGLVEEGIHY 564
           I G    G    ++ LF +M +  +  N  T          L AIS  +    + E I +
Sbjct: 378 ISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF 437

Query: 565 FTSLKKDYGIEPVMDHY------------------------GAMVDLLGRAGRLNEAWDF 600
              L   + +  ++D Y                         +M+  L +     +A   
Sbjct: 438 ---LSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKL 494

Query: 601 IQKM---PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
             +M    +EP   V  ++L AC      E G++    L +           + +++A  
Sbjct: 495 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK--------RKFMTDVFAGN 546

Query: 658 SMWDKLAKVRTIMEKK-GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           ++    AK  +I +        P   +V       +   G  +H   KR       ++DE
Sbjct: 547 ALVYTYAKCGSIEDADLAFSGLPDKGVVSWS----AMIGGLAQHGHGKRALDVFRRMVDE 602

Query: 717 IKAAGYVPDTN 727
             A  ++  T+
Sbjct: 603 RIAPNHITLTS 613



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 6/306 (1%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           +I  +L   A   SL +G  +H + +++G   +      L+  Y+KC    +AR VFD  
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                VSW+S++ AY     P EA+  F+ M  +GV      +   L    D G    G+
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGV 120

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK-LQGKTLVSWNAMILGYAQN 419
            VH +     L  D+ + N+L++MY     VD A  +F +  + +  VSWN M+  + +N
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R ++A+  F +M    ++P+ F    V+ A      +   + +HA+V+R+ ++K+VF  
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY+K G +  A  +F  + +  V +WN  I G   HG  + A+EL  +M      
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 540 PNDITF 545
           PN  T 
Sbjct: 301 PNVFTL 306



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 175/360 (48%), Gaps = 4/360 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   +IK+           LV ++ KY  L DA +VFE IP K   L++ ++ G +  
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               +++S   RMR +           +LK    +  I    ++H      GF  D   +
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVV 444

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            G+++ Y KC  +  A K+F+     +++++ +++   +Q    E A+ L   M  +G  
Sbjct: 445 NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLE 504

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D   + S+L A A++ +   GK VH + ++  F + V    ALV  YAKCG +E A L 
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLA 564

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC--ADLG 354
           F G+  + VVSW++MI    + G+ + A+ +F++M+D+ + P ++T+   L AC  A L 
Sbjct: 565 FSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLV 624

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMI 413
           D  +G F   + +   +       + +I +  +  K+D A ++ + +  +   + W A++
Sbjct: 625 DEAKGYF-SSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALL 683



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 179/381 (46%), Gaps = 19/381 (4%)

Query: 36  SRIYRHPSALLLEVCTSLKELR---RILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDA 91
           S I R   A +L+   SL+ +    ++  L  K G L D H+    L+  + K N L  A
Sbjct: 402 SDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNG-LIDSYWKCNCLRYA 460

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VFE         + +M+   ++    +DA+   + M    + P  +  + LL  C  +
Sbjct: 461 NKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASL 520

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
               +GK++H  LI   F  D+FA   +V  YAKCG IE+A   F  +P++ +VSW+ ++
Sbjct: 521 SAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMI 580

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY--AMRA- 268
            G AQ+G  + ALD+  RM +E    + IT+ S+L A  + G +   K   GY  +M+  
Sbjct: 581 GGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK---GYFSSMKEM 637

Query: 269 -GFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMR 326
            G D      + ++D+  + G+++ A  + + M    N   W +++AA     +PE    
Sbjct: 638 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKL 697

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT-----NSL 381
             +K+     E +   ++ A +  A  G  +    V KL+   K+  + +M+     + +
Sbjct: 698 AAEKLFVLEPEKSGTHVLLA-NTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRV 756

Query: 382 ISMYSKCKKVDRAADIFSKLQ 402
            +     K   RA DI++KL+
Sbjct: 757 HTFIVGDKSHPRARDIYAKLE 777


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 292/785 (37%), Positives = 453/785 (57%), Gaps = 20/785 (2%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP--D 100
           LL+ C   ++ R    +   +I+  +    +    L+SL+ K    + A  VFE +    
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K D + +  M+  Y       DA+   +      + P  Y YT +++ C +   +  G+ 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 160 IHGQLIVNG-FSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
             G L+  G F  D+     +++M+ K     E AYK+FD+M E ++V+W  ++    Q 
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           GF   A+     M   G   D  T+ S+  A A + +L +GK +H +A+R+G   + +V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVE 305

Query: 278 TALVDMYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLD 333
            +LVDMYAKC   G V+  R VFD M+  +V+SW ++I  Y++  N   EA+ +F +M+ 
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 334 QG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           QG VEP + T   A  AC +L D   G  V     +  L ++ S+ NS+ISM+ K  +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A   F  L  K LVS+N  + G  +N    +A     ++  + +   +FT  S++  +A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            +  IR  + IH+ V++     N  V  ALI MY+KCG++ TA  +F+ M  R+V +W  
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI G+  HG     +E FN+M+E   KPN++T++  +SACSH GLV EG  +F S+ +D+
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            I+P M+HY  MVDLL RAG L +A++FI  MP +  + V+   LGAC++H N ELG+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A ++ ELDP+E   ++ L+NIYA A  W++  ++R  M+++ L K  GCS +E+ +++H 
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV----EDYVQENLLSSHSEK 747
           FY G T HP + +IY  L+ LI EIK  GYVPDT+ + H +    ++  +E LL  HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           +A+AFGL+++S    + + KNLRVCGDCHNA KYIS V+GREI++RD++RFH FK+G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845

Query: 808 CGDYW 812
           C DYW
Sbjct: 846 CNDYW 850



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 240/490 (48%), Gaps = 14/490 (2%)

Query: 119 LDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           L  AVS L  M  D + P+    ++ LLK C    + R GK +H +LI      D     
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101

Query: 178 GVVNMYAKCG---QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            ++++Y+K G   + E+ ++   R  +RD+VSW+ ++A +  NG    A+ +     E G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKC-GRVET 292
              +     +++ A +N   + +G+   G+ M+ G F+S V V  +L+DM+ K     E 
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  VFD M   NVV+W  MI   ++ G P EA+R F  M+  G E    T+     ACA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK---KVDRAADIFSKLQGKTLVSW 409
           L +L  G  +H    +  L  DV    SL+ MY+KC     VD    +F +++  +++SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339

Query: 410 NAMILGYAQNGRV-NEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            A+I GY +N  +  EA+N F +M ++ +++P+ FT  S   A   LS  R  K +    
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
            +     N  V  ++I M+ K   +  A+  F+ ++E+++ ++N  +DG   +   + A 
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +L +++ E     +  TF   +S  ++ G + +G    + + K  G+        A++ +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISM 518

Query: 588 LGRAGRLNEA 597
             + G ++ A
Sbjct: 519 YSKCGSIDTA 528



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGIFVHKLLD 367
           + +I  ++  G+   A+     M   G+ P + VT    L +C    D   G  VH  L 
Sbjct: 30  DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ---GKTLVSWNAMILGYAQNGRVNE 424
           +  +  D  + NSLIS+YSK     +A D+F  ++    + +VSW+AM+  Y  NGR  +
Sbjct: 90  EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
           A+  F +     + P+ +   +VI A +    +   +     ++++  FE +V V  +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 484 DMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           DM+ K   +   A  +FD M+E +V TW +MI      G  + A+  F  M+    + + 
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269

Query: 543 ITFLCAISACSH 554
            T     SAC+ 
Sbjct: 270 FTLSSVFSACAE 281


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/777 (35%), Positives = 463/777 (59%), Gaps = 11/777 (1%)

Query: 44   ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            +L++  C  LK+    R+I+  +IKSGL  +   +  L+S+F    ++  A  +F  I +
Sbjct: 265  SLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISE 324

Query: 101  KLDALYHTMLKGYAKFASLDDAVSF--LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +    +++++  YA+   ++++     L+R  +D+V       + LL V GDV   + G+
Sbjct: 325  RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTV--STLLSVLGDVDHQKWGR 382

Query: 159  EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
             IHG ++  GF   +     ++ MYA  G+ EEA  +F +MP +DL+SWN+++A F  +G
Sbjct: 383  GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG 442

Query: 219  FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVS 277
             +  AL ++  M   G+  +++T  S L A  +      G+ +HG  + +G FD+ + + 
Sbjct: 443  RSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQI-IG 501

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             ALV MY K G + T+R V   M  R+VV+WN++I  Y E  +P++A+  FQ +  +GV 
Sbjct: 502  NALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVS 561

Query: 338  PTNVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
               +T++  L AC   GDL ERG  +H  +      +D  + NSLI+MY+KC  +  + D
Sbjct: 562  ANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621

Query: 397  IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
            +F+ L  +++++WNA++   A +G   E L    KMRS  +  D F+    + A A+L+V
Sbjct: 622  LFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAV 681

Query: 457  IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
            +   + +H L ++  FE + F+  A  DMY+KCG +G    +      R + +WN++I  
Sbjct: 682  LEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 741

Query: 517  YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
             G HG  +   E F++MLE   KP  +TF+  ++ACSH GLV++G+ Y+  + KD+G+EP
Sbjct: 742  LGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEP 801

Query: 577  VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
             ++H   ++DLLGR+GRL EA  FI KMP++P   V+ ++L +CKIH++++ G KAA  L
Sbjct: 802  AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENL 861

Query: 637  FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
             +L+P++    VL +N++A    W+ +  VR  M  K ++K   CS V+LK++V SF  G
Sbjct: 862  SKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG 921

Query: 697  STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLL 755
               HPQ+  IY  LE +   IK +GYV DT+ ++ D ++  +E+ L +HSE+LA+A+ L+
Sbjct: 922  DRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALM 981

Query: 756  NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            ++  GST+ I KNLR+C DCH+  K++S V GR I++RD +RFH F++G+CSC DYW
Sbjct: 982  STPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 169/612 (27%), Positives = 314/612 (51%), Gaps = 15/612 (2%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            +E  ++   + KSGL       T ++ L+  Y  +S + +VFE +PD+    + +++ G
Sbjct: 176 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 235

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y+     ++ +     MR + V     + + ++  CG + +   G++I GQ+I +G    
Sbjct: 236 YSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESK 295

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA---LDLVTR 229
           L     +++M+   G ++ A  +F+++ ERD +SWN+IVA +AQNG  E +    +L+ R
Sbjct: 296 LAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRR 355

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
            H+E    +  T+ ++L  + +V   + G+ +HG  ++ GFDS+V V   L+ MYA  GR
Sbjct: 356 FHDE---VNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 412

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
            E A LVF  M +++++SWNS++A++V  G   +A+ I   M+  G     VT   AL A
Sbjct: 413 SEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAA 472

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C      ++G  +H L+    L  +  + N+L+SMY K   +  +  +  ++  + +V+W
Sbjct: 473 CFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAW 532

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVI 468
           NA+I GYA+N   ++AL  F  +R + +  +  T+VSV+ A L    ++   K +HA ++
Sbjct: 533 NALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIV 592

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            + FE +  V  +LI MYAKCG + +++ LF+ ++ R + TWN ++     HG G+  ++
Sbjct: 593 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLK 652

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           L +KM       +  +F   +SA +   ++EEG      L    G E     + A  D+ 
Sbjct: 653 LVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFELDCFIFNAAADMY 711

Query: 589 GRAGRLNEAWDFIQKMP--IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
            + G + E    ++ +P  +   +  +  ++ A   H   E   +  + + E+    G  
Sbjct: 712 SKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPG-- 766

Query: 647 HVLLANIYAAAS 658
           HV   ++  A S
Sbjct: 767 HVTFVSLLTACS 778



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 276/575 (48%), Gaps = 9/575 (1%)

Query: 58  RILPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R L  +   GL    +  T  L++++ K+  +  A  +F+ +P + +  ++TM+ G  + 
Sbjct: 78  RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFA 175
               + + F  +M    + P  +    L+  CG  G + R G ++HG +  +G   D++ 
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 197

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
            T ++++Y   G +  + K+F+ MP+R++VSW +++ G++  G  E  +D+   M  EG 
Sbjct: 198 STAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGV 257

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             +  ++  ++ +   +    +G+ + G  +++G +S + V  +L+ M+   G V+ A  
Sbjct: 258 ECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANY 317

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           +F+ +  R+ +SWNS++AAY + G+ EE+ RIF  M     E  + T+   L    D+  
Sbjct: 318 IFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDH 377

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            + G  +H L+ ++   + V + N+L+ MY+   + + A  +F ++  K L+SWN+++  
Sbjct: 378 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMAS 437

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +  +GR  +AL   C M       +  T  S + A          + +H LV+ S    N
Sbjct: 438 FVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDN 497

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             +  AL+ MY K G + T+R +   M  R V  WN +I GY  +     A+  F  +  
Sbjct: 498 QIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRV 557

Query: 536 GPTKPNDITFLCAISACSHSG-LVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
                N IT +  +SAC   G L+E G  +H +       G E       +++ +  + G
Sbjct: 558 EGVSANYITVVSVLSACLVPGDLLERGKPLHAYIV---SAGFESDEHVKNSLITMYAKCG 614

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
            L+ + D    +     IT + A+L A   H + E
Sbjct: 615 DLSSSQDLFNGLDNRSIIT-WNAILAANAHHGHGE 648



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 241/466 (51%), Gaps = 7/466 (1%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G+ +H   +     L +     ++NMY K G+++ A  +FD+MP R+ VSWNT+++G  +
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL-RIGKAVHGYAMRAGFDSIVN 275
            G     ++   +M + G +     I S++ A    GS+ R G  VHG+  ++G  S V 
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           VSTA++ +Y   G V  +R VF+ M  RNVVSW S++  Y + G PEE + I++ M  +G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           VE    ++   + +C  L D   G  +   + +  L + +++ NSLISM+     VD A 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF+++  +  +SWN+++  YAQNG + E+   F  MR  + + +S T+ +++  L ++ 
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVD 376

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             ++ + IH LV++  F+  V V   L+ MYA  G    A  +F  M  + + +WN ++ 
Sbjct: 377 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMA 436

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYG 573
            +   G    A+ +   M+      N +TF  A++AC      ++G  +H    +   + 
Sbjct: 437 SFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFD 496

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            + + +   A+V + G+ G ++ +   + +MP    +  + A++G 
Sbjct: 497 NQIIGN---ALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGG 538


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/629 (42%), Positives = 401/629 (63%), Gaps = 11/629 (1%)

Query: 195 MFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +F++  ++ ++ SWN+++A  A++G +  AL   + M +   + +  T    + + + + 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  G+  H  A+  GF+  + VS+ALVDMY+KCG +  AR +FD +  RN+VSW SMI 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 314 AYVEGGNPEEAMRIFQKML--------DQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
            YV+  +   A+ +F++ L        D  V    + ++  L AC+ + +      VH  
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L +     D+ + N+L+  Y+KC ++  +  +F  +  + ++SWN++I  YAQNG   E+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 426 LNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           +  F +M +   I  ++ T+ +V+ A A     R  K IH  VI+   E NVFV T++ID
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY KCG V  AR  FD M E++V +W+ M+ GYG HG  K A+E+F +M     KPN IT
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH+GL+EEG H+F ++  ++ +EP ++HYG MVDLLGRAG L EA+D I+ M
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
            + P   V+GA+LGAC++HKNV+LGE +A +LFELDP   GY+VLL+NIYA A  W+ + 
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           ++R +M+  GL K PG SLV++K  VH F  G  +HPQ ++IY +LE L  +++  GYVP
Sbjct: 587 RMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVP 646

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           D  S+ HDV    +E +L  HSEKLA+AFG++N+ PG+TIHI KNLRVCGDCH A K+IS
Sbjct: 647 DMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFIS 706

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  REI+VRD  RFH F++G+CSCGDYW
Sbjct: 707 KIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 230/449 (51%), Gaps = 12/449 (2%)

Query: 84  KYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           +Y++  +   +F    DK +   +++++   A+     +A+     MR   + P    + 
Sbjct: 97  RYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP 156

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
             +K C  + ++  G++ H Q ++ GF  DLF  + +V+MY+KCG++ +A  +FD +  R
Sbjct: 157 CAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR 216

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTR--MHEEGRRGDF------ITIVSILPAVANVGS 254
           ++VSW +++ G+ QN  A  AL L     + E G  GD       I +VS+L A + V  
Sbjct: 217 NIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSE 276

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
             I + VHG+ ++ GF+  + V   L+D YAKCG +  +R VFDGM  R+V+SWNS+IA 
Sbjct: 277 KSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAV 336

Query: 315 YVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           Y + G   E+M IF +M+  G +    VT+   L ACA  G    G  +H  + ++ L +
Sbjct: 337 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 396

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +V +  S+I MY KC KV+ A   F +++ K + SW+AM+ GY  +G   EAL  F +M 
Sbjct: 397 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 456

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
              +KP+  T VSV+ A +   ++     W  A+      E  V     ++D+  + G +
Sbjct: 457 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 516

Query: 493 GTARALFDMMNER-HVTTWNVMIDGYGTH 520
             A  L   M  R     W  ++     H
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMH 545



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 142/279 (50%), Gaps = 14/279 (5%)

Query: 46  LLEVCTSLKE---LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+ + E      +   +IK G       +  L+  + K   L  + RVF+ + ++ 
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL---LKVCGDVGEIRRGKE 159
              +++++  YA+     +++    RM  D    + YN   L   L  C   G  R GK 
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKD--GEINYNAVTLSAVLLACAHSGSQRLGKC 384

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH Q+I  G   ++F  T +++MY KCG++E A K FDRM E+++ SW+ +VAG+  +G 
Sbjct: 385 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 444

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY-AMRAGFDSIVNVS- 277
           A+ AL++   M+  G + ++IT VS+L A ++ G L  G   H + AM   FD    V  
Sbjct: 445 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG--WHWFKAMSHEFDVEPGVEH 502

Query: 278 -TALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
              +VD+  + G ++ A  +  GMK R + V W +++ A
Sbjct: 503 YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 541


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/714 (38%), Positives = 421/714 (58%), Gaps = 24/714 (3%)

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIH 161
           +A Y+ ++  Y        + +  + MR +D A +  +    LLK C        G+E+H
Sbjct: 52  EANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELH 111

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G    NGF+ D+F    ++NMY KCG +  A  +FD+MPERD+VSW T++  + ++    
Sbjct: 112 GFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFG 171

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TA 279
            AL LV  M   G +   + ++S++    N+  ++ G+AVHGY +R   D  + VS  TA
Sbjct: 172 EALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTA 231

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+DMY K G + +A+ +FD +  R+VVSW  MIA  +     +E  + F +ML++ + P 
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPN 291

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
            +T++  +  C  +G L+ G + H  L +   G  +++  +LI MY KC +V  A  +F+
Sbjct: 292 EITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFN 351

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            ++ K +  W+ +I  YA    +++  N F +M + ++KP++ TMVS++   AE   +  
Sbjct: 352 GVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDL 411

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            KW HA + R   E +V + TALI+MYAKCG V  AR+LF+   +R +  WN M+ G+  
Sbjct: 412 GKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSM 471

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG GK A+ELF++M     +PNDITF+    ACSHSGL                    M+
Sbjct: 472 HGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------ME 511

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HYG +VDLLGRAG L+EA + I+ MP+ P   ++GA+L ACK+HKN+ LGE AA ++ EL
Sbjct: 512 HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILEL 571

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP   GY VL +NIYA+A  W+ +  VR  M   G++K PG S +E+   VH F SG   
Sbjct: 572 DPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKA 631

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
             Q+ ++Y  +  +  +++ +GY P+T ++  ++++  +E+ LS HSEKLA AFGL++++
Sbjct: 632 CTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTA 691

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           PG+ I I KNLR+C DCH ATK +S + GR IIVRD +RFH F  G CSC  YW
Sbjct: 692 PGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 262/536 (48%), Gaps = 51/536 (9%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K+G          L++++ K   L  A  VF+ +P++    + TML  Y +  +  +A+ 
Sbjct: 116 KNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALR 175

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI--VNGFSLDLFAMTGVVNM 182
            +  M++  V         L+ V G++ +++ G+ +HG ++  V    +++   T +++M
Sbjct: 176 LVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDM 235

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y K G +  A ++FDR+ +R +VSW  ++AG  ++   +       RM EE    + IT+
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +S++     VG+L +GK  H Y +R GF   + + TAL+DMY KCG+V  AR +F+G+K 
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK 355

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++V  W+ +I+AY      ++   +F +ML+  V+P NVT++  L  CA+ G L+ G + 
Sbjct: 356 KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWT 415

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  +++  L  DV +  +LI+MY+KC  V  A  +F++   + +  WN M+ G++ +G  
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCG 475

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EAL  F +M S  ++P+  T VS+  A +   ++ +                      L
Sbjct: 476 KEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH-------------------YGCL 516

Query: 483 IDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH---GLGKAAVE---------- 528
           +D+  + G +  A  + + M  R +   W  ++     H    LG+ A            
Sbjct: 517 VDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNC 576

Query: 529 ----LFNKMLEGPTKPNDITFLCAISACSHSGLVEE----------GIHYFTSLKK 570
               L + +     + ND+T +    A SHSG+ +E           +H+F S  K
Sbjct: 577 GYSVLKSNIYASAKRWNDVTSV--REAMSHSGMKKEPGLSWIEVSGSVHHFKSGDK 630


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/734 (38%), Positives = 422/734 (57%), Gaps = 41/734 (5%)

Query: 119 LDDAVSFLIRMRYDDVAP---VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
           L   VS L  + + D +P   +V+++  L  +  +   ++  K+IH Q+I  G     FA
Sbjct: 4   LASPVSTLQVLSFSDPSPPYKLVHDHPSL-TLLSNCKTLQTLKQIHSQIIKTGLHNTHFA 62

Query: 176 MTGVVNMYAKC--GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           ++ ++   A    G +  A  +F  +   + V WN ++ G + +    LAL+    M   
Sbjct: 63  LSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISS 122

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   +  T  SI  +   +     GK VH + ++ G +    V T+L++MYA+ G +  A
Sbjct: 123 GTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNA 182

Query: 294 RLVFDG-------------------------------MKSRNVVSWNSMIAAYVEGGNPE 322
           RLVFD                                +  R+VVSWN+MI+ Y + G  E
Sbjct: 183 RLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVE 242

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGD-LERGIFVHKLLDQLKLGTDVSMTNSL 381
           EAM  F++M    V P   T++  L ACA  G  L+ G +V   ++   LG+++ + N L
Sbjct: 243 EAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           I MY KC  ++ A+++F K+Q K +VSWN MI GY       EAL  F +M   NI P+ 
Sbjct: 303 IDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPND 362

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRS--CFEKNVFVMTALIDMYAKCGAVGTARALF 499
            T +S++PA A L  +   KW+HA V ++    +  V + T+LIDMYAKCG +  A+ +F
Sbjct: 363 VTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIF 422

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D MN + + TWN MI G+  HG    A+ LF++M      P+DITF+  ++AC H+GL+ 
Sbjct: 423 DCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLS 482

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G  YF+S+ +DY + P + HYG M+DL GRAG  +EA   ++ M ++P   ++ ++LGA
Sbjct: 483 LGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGA 542

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C+IH+ +EL E  A  LFEL+P+    +VLL+NIYA A  W+ +AK+RT +    ++K P
Sbjct: 543 CRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVP 602

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           GCS +E+ + VH F  G   HPQS  IY  L+ +   ++ AG+VPDT+ + +D+++  +E
Sbjct: 603 GCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKE 662

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +LS HSEKLAIAFGL+++ PG+TI I KNLRVCG+CH+ATK IS +  REII RD +RF
Sbjct: 663 GVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRF 722

Query: 799 HCFKNGVCSCGDYW 812
           H FK+G CSC DYW
Sbjct: 723 HHFKDGSCSCKDYW 736



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 253/503 (50%), Gaps = 39/503 (7%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC---KYNSLSDAARV 94
           ++ HPS  LL  C +L+ L++I   IIK+GL + H   +KL+  FC    +  LS A  +
Sbjct: 26  VHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYALSL 84

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+ I +    +++ M++G +   S   A+ + + M      P  Y +  + K C  +   
Sbjct: 85  FKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGA 144

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ-------------------------- 188
             GK++H  ++  G   + F  T ++NMYA+ G+                          
Sbjct: 145 HEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGY 204

Query: 189 -----IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                ++EA ++FD +P RD+VSWN +++G+AQ+G  E A+     M       +  T++
Sbjct: 205 ASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTML 264

Query: 244 SILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           S+L A A  G SL++G  V  +    G  S + +   L+DMY KCG +E A  +F+ ++ 
Sbjct: 265 SVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQD 324

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           +NVVSWN MI  Y      +EA+ +F++M+   ++P +VT +  L ACA+LG L+ G +V
Sbjct: 325 KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWV 384

Query: 363 HKLLDQ--LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           H  +D+    +   V++  SLI MY+KC  +  A  IF  +  K+L +WNAMI G+A +G
Sbjct: 385 HAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHG 444

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
             + AL  F +M S+   PD  T V V+ A     ++    ++  +++        +   
Sbjct: 445 HTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHY 504

Query: 480 TALIDMYAKCGAVGTARALFDMM 502
             +ID++ + G    A  L   M
Sbjct: 505 GCMIDLFGRAGLFDEAETLVKNM 527



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 205/403 (50%), Gaps = 13/403 (3%)

Query: 10  SVFTNSTPTQTLHE----HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIK 65
           S+F + T  +  HE    H H L  +  +    + H S  L+ +     EL     +  K
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVL--KLGLEHNAFVHTS--LINMYAQNGELVNARLVFDK 188

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           S + D   F T L++ +     L +A  +F+ IP +    ++ M+ GYA+   +++A++F
Sbjct: 189 SSMRDAVSF-TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAF 247

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
              MR   V P V     +L  C   G  ++ G  +   +   G   ++  + G+++MY 
Sbjct: 248 FEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYV 307

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG +EEA  +F+++ ++++VSWN ++ G+      + AL L  RM +     + +T +S
Sbjct: 308 KCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLS 367

Query: 245 ILPAVANVGSLRIGKAVHGYAMR--AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           ILPA AN+G+L +GK VH Y  +      + V + T+L+DMYAKCG +  A+ +FD M +
Sbjct: 368 ILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNT 427

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IF 361
           +++ +WN+MI+ +   G+ + A+ +F +M  +G  P ++T +  L AC   G L  G  +
Sbjct: 428 KSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRY 487

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
              ++   K+   +     +I ++ +    D A  +   ++ K
Sbjct: 488 FSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK 530


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/809 (35%), Positives = 467/809 (57%), Gaps = 40/809 (4%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY---NSLSDAARVFEPI 98
           PS+L  + C ++ EL+     + K GL +     TKLV+  C+     SLS A  VFE  
Sbjct: 36  PSSL--KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93

Query: 99  PDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
                  +Y+++++GYA     ++A+   +RM    ++P  Y + + L  C        G
Sbjct: 94  ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            +IHG ++  G++ DLF    +V+ YA+CG+++ A K+FD M ER++VSW +++ G+A+ 
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213

Query: 218 GFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            FA+ A+DL  RM  +E    + +T+V ++ A A +  L  G+ V+ +   +G +    +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +ALVDMY KC  ++ A+ +FD   + N+   N+M + YV  G   EA+ +F  M+D GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P  ++++ A+ +C+ L ++  G   H  + +    +  ++ N+LI MY KC + D A  
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVN-------------------------------EA 425
           IF ++  KT+V+WN+++ GY +NG V+                               EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 426 LNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           +  FC M+S+  +  D  TM+S+  A   L  +  AKWI+  + ++  + +V + T L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           M+++CG   +A ++F+ +  R V+ W   I      G  + A+ELF+ M+E   KP+ + 
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+ A++ACSH GLV++G   F S+ K +G+ P   HYG MVDLLGRAG L EA   I+ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P+EP   ++ ++L AC++  NVE+   AA ++  L P+  G +VLL+N+YA+A  W+ +A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           KVR  M++KGL+K PG S ++++ + H F SG   HP+   I   L+ +       G+VP
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753

Query: 725 D-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           D +N + DV++  +  +LS HSEKLA+A+GL++S+ G+TI I KNLRVC DCH+  K+ S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            V  REII+RD +RFH  + G CSCGD+W
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDFW 842


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/661 (40%), Positives = 411/661 (62%), Gaps = 2/661 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +RRGK++H  LI  G++   F    +VNMY+KCG+++ A K+FD MP+R+LVSW  +++G
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            +QN     A+     M   G         S + A A++GS+ +GK +H  A++ G  S 
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V + L DMY+KCG +  A  VF+ M  ++ VSW +MI  Y + G  EEA+  F+KM+D
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           + V      +   L AC  L   + G  VH  + +L   +D+ + N+L  MYSK   ++ 
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 394 AADIFS-KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           A+++F    + + +VS+  +I GY +  ++ + L+ F ++R + I+P+ FT  S+I A A
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
             + +     +HA V++  F+++ FV + L+DMY KCG +  A   FD + +     WN 
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 380

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           ++  +G HGLGK A+++F +M++   KPN ITF+  ++ CSH+GLVEEG+ YF S+ K Y
Sbjct: 381 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+ P  +HY  ++DLLGRAGRL EA +FI +MP EP    + + LGAC+IH + E+G+ A
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +L +L+P   G  VLL+NIYA    W+ +  VR  M    ++K PG S V++  + H 
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIA 751
           F +    HP+   IY  L+TL+D+IKAAGYVP T+S+  D++D ++E LL  HSE++A+A
Sbjct: 561 FGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVA 620

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           F L++   G  I ++KNLRVC DCH+A K+IS VTGR+IIVRD  RFH F +G CSCGDY
Sbjct: 621 FALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDY 680

Query: 812 W 812
           W
Sbjct: 681 W 681



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 257/523 (49%), Gaps = 39/523 (7%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +++     K LRR   +  L+I +G          LV+++ K   L  A ++F+ +P 
Sbjct: 9   AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  M+ G ++ +   +A+     MR     P  + ++  ++ C  +G I  GK++
Sbjct: 69  RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   +LF  + + +MY+KCG + +A K+F+ MP +D VSW  ++ G+++ G  
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E AL    +M +E    D   + S L A   + + + G++VH   ++ GF+S + V  AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248

Query: 281 VDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            DMY+K G +E+A  VF G+ S  RNVVS+  +I  YVE    E+ + +F ++  QG+EP
Sbjct: 249 TDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
              T    + ACA+   LE+G  +H  + ++    D  +++ L+ MY KC  +++A   F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 367

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++   T ++WN+++  + Q+G   +A+  F +M  + +KP++ T +S++   +   ++ 
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLV- 426

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
                         E+ +    ++   Y   G V           E H   ++ +ID  G
Sbjct: 427 --------------EEGLDYFYSMDKTY---GVVP---------GEEH---YSCVIDLLG 457

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
             G  K A E  N+M   P +PN   +   + AC   G  E G
Sbjct: 458 RAGRLKEAKEFINRM---PFEPNAFGWCSFLGACRIHGDKEMG 497



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 192/362 (53%), Gaps = 4/362 (1%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D   +  ++   A    LR GK +H   + AG+     ++  LV+MY+KCG ++ A  +F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  RN+VSW +MI+   +     EA+R F  M   G  PT      A+ ACA LG +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L  +  +G+++ + ++L  MYSKC  +  A  +F ++  K  VSW AMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           + G   EAL  F KM  + +  D   + S + A   L   ++ + +H+ V++  FE ++F
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           V  AL DMY+K G + +A  +F + +E R+V ++  +IDGY      +  + +F ++   
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLN 595
             +PN+ TF   I AC++   +E+G      + K ++  +P +     +VD+ G+ G L 
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 596 EA 597
           +A
Sbjct: 362 QA 363


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/751 (38%), Positives = 443/751 (58%), Gaps = 39/751 (5%)

Query: 99  PDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI--R 155
           PD  DA+ Y++++     F     A+  L  M  D      +    +L  C  + +   R
Sbjct: 113 PDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEVSS-FTLVSVLLACSHLADQGHR 171

Query: 156 RGKEIHGQLIVNGF---SLDLFAMTGVVNMYAKCGQIEEAYKMF--DRMPERDLVSWNTI 210
            G+E H   + +GF     + F    +++MYA+ G +++A ++F        DLV+WNT+
Sbjct: 172 LGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTM 231

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++   Q G  E A+ ++  M   G R D +T  S LPA + +  L +G+ VH + ++   
Sbjct: 232 ISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD- 290

Query: 271 DSIVN--VSTALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVE-GGNPEEAM 325
           D   N  V++ALVDMYA   +V  AR VFD +    R +  WN+MI  Y + GG  EEA+
Sbjct: 291 DLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAI 350

Query: 326 RIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
            +F +M  + G  P+  T+   L ACA          VH  + +  + ++  + N+L+ M
Sbjct: 351 ELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDM 410

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR----------- 433
           Y++  ++D A  IF+ +  + +VSWN +I G    G ++EA     +M+           
Sbjct: 411 YARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETM 470

Query: 434 ---------SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
                     +   P++ T+++++P  A L+     K IH   +R   E ++ V +AL+D
Sbjct: 471 LEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVD 530

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDI 543
           MYAKCG +  ARA+FD +  R+V TWNV+I  YG HGLG  A+ LF++M+  G   PN++
Sbjct: 531 MYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEV 590

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+ A++ACSHSGLV+ G+  F  +K+DYG EP    +  +VD+LGRAGRL+EA+  I  
Sbjct: 591 TFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISS 650

Query: 604 M-PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           M P E  ++ +  MLGAC++H+NV+LG  AA RLFEL+PDE  ++VLL NIY+AA +W+ 
Sbjct: 651 MAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWEN 710

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
             +VR +M ++G+ K PGCS +EL   +H F +G + HP+S +++  ++ L + ++  GY
Sbjct: 711 STEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGY 770

Query: 723 VPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           VPDT+ + HDV++  +  +L  HSEKLAIAFGLL + PG+TI + KNLRVC DCH A K+
Sbjct: 771 VPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKF 830

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS + GREI++RD+ RFH F++G CSCGDYW
Sbjct: 831 ISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 213/433 (49%), Gaps = 40/433 (9%)

Query: 244 SILPAVANVGSLRIGK---AVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++ PA+ +  +LR  +   A+HG ++R          VS AL+  YA+CG ++ A  +F 
Sbjct: 50  ALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFA 109

Query: 299 GMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                 R+ VS+NS+I+A         A+   + ML    E ++ T++  L AC+ L D 
Sbjct: 110 ATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHLADQ 168

Query: 357 ------ERGIFV--HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF--SKLQGKTL 406
                 E   F   H  LD+   G +    N+L+SMY++   VD A  +F  S      L
Sbjct: 169 GHRLGREAHAFALKHGFLDK---GRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           V+WN MI    Q GR  EA+     M +  ++PD  T  S +PA + L ++   + +HA 
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285

Query: 467 VIR-SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNVMIDGYGTH-GL 522
           V++      N FV +AL+DMYA    V  AR +FDM+ E  R +  WN MI GY  H G+
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345

Query: 523 GKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYGIEPVMD 579
            + A+ELF++M  E    P++ T    + AC+ S +   +E +H +  +K+D      + 
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYV-VKRDMASNRFVQ 404

Query: 580 HYGAMVDLLGRAGRLNEAW---------DFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           +  A++D+  R GR++EA          D +    +  G  V G +  A ++ + ++L  
Sbjct: 405 N--ALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPS 462

Query: 631 KAANRLFELDPDE 643
            AA+    L+ D+
Sbjct: 463 SAASGETMLEGDD 475


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/800 (35%), Positives = 442/800 (55%), Gaps = 73/800 (9%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLV--SLFCKYNSLSDAARVFEPIPDKLDA 104
           L  C +LK+  RIL  +I +G        ++L+  S    +  L  + ++F+ I +    
Sbjct: 48  LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 107

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +++TM++ Y +  S + A+     M  ++V P  Y Y  +++ C        GKEIH  +
Sbjct: 108 MWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHV 167

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF  D++    ++NMYA CG + +A K+FD  P  D VSWN+I+AG+ + G  E A 
Sbjct: 168 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAK 227

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +  +M +                                         +  S +++ + 
Sbjct: 228 LIFDQMPQRN---------------------------------------IVASNSMIVLL 248

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G+V  A  +F+ M  +++VSW+++I+ Y + G  EEA+ +F +M   G+    V ++
Sbjct: 249 GKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVV 308

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS------------------ 386
             L ACA L  ++ G  +H L+ ++ + + V++ N+LI MYS                  
Sbjct: 309 SVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNL 368

Query: 387 -------------KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
                        KC  V++A  +F  +  K +VSW+A+I GYAQ+   +E L  F +M+
Sbjct: 369 DQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQ 428

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
              I+PD   +VSVI A   L+ +   KW+HA + ++  + NV + T L+DMY KCG V 
Sbjct: 429 LGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVE 488

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F+ M E+ V++WN +I G   +GL + ++++F++M      PN+ITF+  + AC 
Sbjct: 489 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 548

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H GLV+EG  +F S+ + +GIEP + HYG MVDLLGRAG LNEA   I+ MP+ P +  +
Sbjct: 549 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 608

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+LGACK H + E+GE+   +L EL PD  G+HVLL+NI+A+   W+ + +VR +M+++
Sbjct: 609 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 668

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DV 732
           G+ KTPGCSL+E    VH F +G   HP   ++   L  +   +K  GY PDTN +  D+
Sbjct: 669 GVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDI 728

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E  L  HSEKLAIAFGLL  SP + I I KNLR+C DCH A K IS    REI+V
Sbjct: 729 DEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVV 788

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD HRFH FK G CSC DYW
Sbjct: 789 RDRHRFHYFKEGACSCMDYW 808



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 161/380 (42%), Gaps = 60/380 (15%)

Query: 337 EPT-NVTIMEA-LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL-----ISMYSKCK 389
           +PT  ++I+E  LH C +L    R      +L Q+ L   +S T +       S  S   
Sbjct: 36  KPTITLSILETHLHNCHNLKQFNR------ILSQMILTGFISDTFAASRLLKFSTDSPFI 89

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +D +  IF +++      WN M+  Y Q+    +AL  +  M   N+ PD++T   V+ 
Sbjct: 90  GLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQ 149

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A   +    K IH  V++  F+ +V+V   LI+MYA CG +  AR LFD        +
Sbjct: 150 ACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 209

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN ++ GY   G  + A  +F++M +     ++                           
Sbjct: 210 WNSILAGYVKKGDVEEAKLIFDQMPQRNIVASN--------------------------- 242

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
                        +M+ LLG+ G++ EAW    +M  E  +  + A++     ++   + 
Sbjct: 243 -------------SMIVLLGKMGQVMEAWKLFNEMD-EKDMVSWSALISG---YEQNGMY 285

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC-SLVELKN 688
           E+A     E++ +  G  +    + +  S    L+ V+T     GL    G  S V L+N
Sbjct: 286 EEALVMFIEMNAN--GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQN 343

Query: 689 EVHSFYSGSTKHPQSKRIYT 708
            +   YSGS +   +++++ 
Sbjct: 344 ALIHMYSGSGEIMDAQKLFN 363


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/723 (36%), Positives = 425/723 (58%), Gaps = 1/723 (0%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A R+F  +P+K    ++ +L GYA+       +    +M+  +     +  + +LK C +
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
            G +R GK +H   + +G  +D F    +V+MY+KCG + +A K+F ++   D+V+W+ +
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + G  Q G  + A +L   M  +G R +  T+ S++    N+G LR G+++HG   + GF
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           +S   VS  L+ MY K   VE    VF+ M + ++VSWN++++ + +        RIF +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML +G +P   T +  L +C+ L D E G  VH  + +     D  +  +L+ MY+K + 
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A   F +L  + + SW  +I GYAQ  +  +A+ YF +M+ + IKP+ +T+ S +  
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            + ++ +   + +HA+ +++    ++FV +AL+D+Y KCG +  A A+F  +  R + +W
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N +I GY  HG G+ A+E F  ML     P++ TF+  +SACS  GLVEEG   F S+ K
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
            YGI P ++HY  MVD+LGRAG+ NE   FI++M + P   ++  +LGACK+H NV+ GE
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
           KAA +LFE++P     ++LL+NI+A+   WD +  +R +M  +G++K PGCS VE+  +V
Sbjct: 544 KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQV 603

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H F S    HP+ + IY  L+ L   + + GYVP T  + H+V +  +   L  HSE+LA
Sbjct: 604 HVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLA 663

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           ++F LL+++    I I KNLR+C DCH+  K IS +T +EI+VRD+ RFH FK G CSC 
Sbjct: 664 LSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQ 723

Query: 810 DYW 812
           D W
Sbjct: 724 DRW 726



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 231/450 (51%), Gaps = 17/450 (3%)

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           +E A ++F  MPE++ VSWN ++ G+AQ G  +  L L  +M E   +    T+ ++L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            AN GSLR GK +H  A+R+G +    +  +LVDMY+KCG V  A  VF  +++ +VV+W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           ++MI    + G+ +EA  +F  M  +G  P   T+   +    ++GDL  G  +H  + +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
               +D  ++N LI MY K + V+    +F  +    LVSWNA++ G+  +         
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +M  +  KP+ FT +SV+ + + L    + K +HA +I++  + + FV TAL+DMYAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
              +  A   FD +  R + +W V+I GY      + AV+ F +M     KPN+ T    
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG------AMVDLLGRAGRLNEAWDFIQ 602
           +S CSH   +E G       ++ + +     H+G      A+VDL G+ G +  A + I 
Sbjct: 361 LSGCSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHA-EAIF 412

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           K  I   I  +  ++     H     GEKA
Sbjct: 413 KGLISRDIVSWNTIISGYSQHGQ---GEKA 439



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 237/485 (48%), Gaps = 6/485 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL+E + +  L ++SG          LV ++ K  ++ DA +VF  I +     +  M+ 
Sbjct: 66  SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G  +     +A      MR     P  +  + L+    ++G++R G+ IHG +   GF  
Sbjct: 126 GLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D      ++ MY K   +E+  K+F+ M   DLVSWN +++GF  +        +  +M 
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG + +  T +S+L + +++     GK VH + ++   D    V TALVDMYAK   +E
Sbjct: 246 LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLE 305

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A + FD + +R++ SW  +I+ Y +    E+A++ F++M  +G++P   T+   L  C+
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCS 365

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            +  LE G  +H +  +     D+ + ++L+ +Y KC  ++ A  IF  L  + +VSWN 
Sbjct: 366 HMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNT 425

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRS 470
           +I GY+Q+G+  +AL  F  M S+ I PD  T + V+ A + + ++    K   ++    
Sbjct: 426 IISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIY 485

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LG-KA 525
               ++     ++D+  + G     +   + MN   +   W  ++     HG    G KA
Sbjct: 486 GINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKA 545

Query: 526 AVELF 530
           A +LF
Sbjct: 546 AKKLF 550


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/781 (36%), Positives = 448/781 (57%), Gaps = 11/781 (1%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARV 94
           Y  P  +LL+ C  +++L     I  L IK G CD  +F    LV+L+ K N ++ A ++
Sbjct: 59  YTFP--VLLKACGIVEDLFCGAEIHGLAIKYG-CDSFVFVVNSLVALYAKCNDINGARKL 115

Query: 95  FEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           F+ +  + D + +++++  Y+      +A+     M    V    Y +   L+ C D   
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           I+ G +IH  ++ +G  LD++    +V MY + G++ EA  +F  +  +D+V+WN+++ G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           F QNG    AL+    +     + D ++I+SI+ A   +G L  GK +H YA++ GFDS 
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V   L+DMYAKC  +      FD M  ++++SW +  A Y +     +A+ + +++  
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G++     I   L AC  L  L +   +H    +  L +D  + N++I +Y +C  +D 
Sbjct: 356 EGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDY 414

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  IF  ++ K +VSW +MI  Y  NG  N+AL  F  M+   ++PD  T+VS++ A+  
Sbjct: 415 AVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS ++  K IH  +IR  F     +   L+DMYA+CG+V  A  +F     R++  W  M
Sbjct: 475 LSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAM 534

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I  YG HG G+AAVELF +M +    P+ ITFL  + ACSHSGLV EG  +   +K +Y 
Sbjct: 535 ISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQ 594

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           +EP  +HY  +VDLLGR   L EA+  ++ M  EP   V+ A+LGAC+IH N E+GE AA
Sbjct: 595 LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            +L ELD D  G +VL++N++AA   W  + +VR  M+  GL K PGCS +E+ N++H+F
Sbjct: 655 EKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAF 714

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIK-AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
            S    HP+  +IY  L  + +++K   GYV  T  + H+V +  +  +L  HSE+LAIA
Sbjct: 715 LSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIA 774

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +GLL ++ G+ I + KNLRVCGDCH+    +S    RE+IVRD  RFH FK+G+CSCGD+
Sbjct: 775 YGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDF 834

Query: 812 W 812
           W
Sbjct: 835 W 835



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 167/503 (33%), Positives = 258/503 (51%), Gaps = 34/503 (6%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY KCG + +A  +FD+M ER + +WN ++ G+  NG A  AL++   M   G   D  T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
              +L A   V  L  G  +HG A++ G DS V V  +LV +YAKC  +  AR +FD M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 302 SRN-VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
            RN VVSWNS+I+AY   G   EA+ +F +ML  GV     T   AL AC D   ++ G+
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +     DV + N+L++MY +  K+  AA IF  L+GK +V+WN+M+ G+ QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
             +EAL +F  +++ ++KPD  +++S+I A   L  +   K IHA  I++ F+ N+ V  
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEG--- 536
            LIDMYAKC  +      FD+M  + + +W     GY  +     A+EL  ++ +EG   
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 537 -PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
             T    I   C    C   G ++E IH +T   +    +PV+ +   ++D+ G  G ++
Sbjct: 361 DATMIGSILLACRGLNC--LGKIKE-IHGYTI--RGGLSDPVLQN--TIIDVYGECGIID 413

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE---------LDPDEGGY 646
            A    +   IE    V    + +C +H  +      AN+  E         L+PD    
Sbjct: 414 YAVRIFE--SIECKDVVSWTSMISCYVHNGL------ANKALEVFSSMKETGLEPD---- 461

Query: 647 HVLLANIYAAASMWDKLAKVRTI 669
           +V L +I +A      L K + I
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEI 484



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 289/566 (51%), Gaps = 12/566 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K  S+ DA  +F+ + ++    ++ M+ GY        A+     MR+  V+   Y 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LLK CG V ++  G EIHG  I  G    +F +  +V +YAKC  I  A K+FDRM 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 201 ER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            R D+VSWN+I++ ++ NG    AL L + M + G   +  T  + L A  +   +++G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H   +++G    V V+ ALV MY + G++  A ++F  ++ +++V+WNSM+  +++ G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              EA+  F  + +  ++P  V+I+  + A   LG L  G  +H    +    +++ + N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LI MY+KC  +      F  +  K L+SW     GYAQN    +AL    +++ + +  
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D+  + S++ A   L+ +   K IH   IR      V   T +ID+Y +CG +  A  +F
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNT-IIDVYGECGIIDYAVRIF 419

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA-CSHSGLV 558
           + +  + V +W  MI  Y  +GL   A+E+F+ M E   +P+ +T +  +SA CS S L 
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLK 479

Query: 559 E-EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           + + IH F  ++K + +E  + +   +VD+  R G + +A+  I        + ++ AM+
Sbjct: 480 KGKEIHGFI-IRKGFILEGSISN--TLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMI 535

Query: 618 GACKIHKNVELGEKAANRLFELDPDE 643
            A  +H   E    AA  LF    DE
Sbjct: 536 SAYGMHGYGE----AAVELFMRMKDE 557


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 272/722 (37%), Positives = 426/722 (59%), Gaps = 5/722 (0%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDV 151
           VF+ +P++    + T++ GYA+     +A     R+  +  ++ P V+     L V  + 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E+  G+ +HG ++  G+  + F  T +++ Y+  G +  A ++FD +  +D+VSW  ++
Sbjct: 62  AEL--GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           A +A+N     AL+  ++M   G + +  T   +L A   + +   GK VH   ++  ++
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             + V   L+++Y +CG  + A   F  M   +V+ W+ MI+ + + G  E+A+ IF +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
               V P   T    L A AD+  L+    +H    +  L TDV ++N+L++ Y+KC  +
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +++ ++F  L  +  VSWN +I+ Y Q G    AL+ F  M    ++    T  S++ A 
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L+ +     +H L  ++ + ++V V  ALIDMYAKCG++  AR +FDM++ R   +WN
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            +I GY  HGLG  A+++FN M E   KP+++TF+  +SACS++G ++EG  YFTS+K+D
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQD 479

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YGIEP M+HY  MV L+GR+G L++A  FI+ +P EP + ++ A+LGAC IH +VELG  
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRI 539

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           +A R+ EL+P +   HVLL+NIYA A  W  +A VR  M++KG++K PG S +E +  VH
Sbjct: 540 SAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVH 599

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
            F    T H   K I   LE L  + + AGY P  N++  DVED  +E LL  HSE+LA+
Sbjct: 600 CFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLAL 659

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFGL+    G  I I KNLR+C DCH+  K IS + GR+IIVRDM+RFH F+NG CSC D
Sbjct: 660 AFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCAD 719

Query: 811 YW 812
           YW
Sbjct: 720 YW 721



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/409 (33%), Positives = 221/409 (54%), Gaps = 1/409 (0%)

Query: 43  SALLLEVCTSLKELRRIL-PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           + L L V     EL RI+   ++K G        T L+  +     +S A  VF+ I  K
Sbjct: 51  TVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK 110

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  M+  YA+     +A+ F  +MR     P  + +  +LK C  +     GK +H
Sbjct: 111 DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVH 170

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             ++   +  DL+   G++ +Y +CG  ++A++ F  MP+ D++ W+ +++ FAQ+G +E
Sbjct: 171 CSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSE 230

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL++  +M       +  T  S+L A A++ SL + K +HG+A++AG  + V VS AL+
Sbjct: 231 KALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALM 290

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
             YAKCG +E +  +F+ +  RN VSWN++I +YV+ G+ E A+ +F  ML   V+ T V
Sbjct: 291 ACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEV 350

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L ACA L  LE G+ VH L  +   G DV++ N+LI MY+KC  +  A  +F  L
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
             +  VSWNA+I GY+ +G   EA+  F  M+    KPD  T V V+ A
Sbjct: 411 DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSA 459



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%)

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           +VFD M  RN VS+ ++I  Y +     EA  +F ++  +G E         L     + 
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
             E G  VH  + ++  G++  +  +LI  YS    V  A ++F ++  K +VSW  MI 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
            YA+N   +EAL +F +MR    KP++FT   V+ A   L      K +H  V+++ +E+
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           +++V   L+++Y +CG    A   F  M +  V  W+ MI  +   G  + A+E+F +M 
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 535 EGPTKPNDITFLCAISA 551
                PN  TF   + A
Sbjct: 241 RAFVIPNQFTFSSVLQA 257


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 283/752 (37%), Positives = 449/752 (59%), Gaps = 2/752 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G       Q  L++ +  +  L DA+++F+ +P      + T+ +G+++      A
Sbjct: 29  ILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRA 88

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
              L+R+  +      + +T LLK+   +        +H  +   G   D F  T +++ 
Sbjct: 89  RRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDA 148

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+ CG ++ A ++FD +  +D+VSW  +VA +A+N   E +L L  +M   G R +  TI
Sbjct: 149 YSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTI 208

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            + L +   + + ++GK+VHG A++  +D  + V  AL+++Y K G +  A+  F+ M  
Sbjct: 209 SAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPK 268

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIMEALHACADLGDLERGIF 361
            +++ W+ MI+ Y +    +EA+ +F +M    V  P N T    L ACA L  L  G  
Sbjct: 269 DDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQ 328

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H  + ++ L ++V ++N+L+ +Y+KC +++ +  +F+    K  V+WN +I+GY Q G 
Sbjct: 329 IHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGD 388

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             +ALN F  M   +I+P   T  SV+ A A L  +   + IH+L I++ + K+  V  +
Sbjct: 389 GEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANS 448

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           LIDMYAKCG +  AR  FD M+++   +WN +I GY  HGLG  A+ LF+ M +  +KPN
Sbjct: 449 LIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPN 508

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            +TF+  +SACS++GL+++G  +F S+ +DYGIEP ++HY  MV LLGR+G+ +EA   I
Sbjct: 509 KLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLI 568

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
            ++P +P + V+ A+LGAC IHKN++LG+  A R+ E++P +   HVLL+N+YA A  WD
Sbjct: 569 GEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWD 628

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
            +A VR  M+KK ++K PG S VE +  VH F  G T HP  K I+  LE L  + + AG
Sbjct: 629 NVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAG 688

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           YVPD + +  DVED  +E LL  HSE+LA+AFGL+    G +I I KNLR+C DCH   K
Sbjct: 689 YVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIK 748

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +S +  REI++RD++RFH F+ GVCSCGDYW
Sbjct: 749 LVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 264/486 (54%), Gaps = 11/486 (2%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK +H  ++ +G SLDLFA   ++N Y   G +E+A K+FD MP  + VS+ T+  GF++
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +   + A  L+ R+  EG   +     ++L  + ++       +VH Y  + G  +   V
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TAL+D Y+ CG V+ AR VFDG+  +++VSW  M+A Y E    E+++ +F +M   G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P N TI  AL +C  L   + G  VH    ++    D+ +  +L+ +Y+K  ++  A  
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELS 455
            F ++    L+ W+ MI  YAQ+ +  EAL  FC+MR S  + P++FT  SV+ A A L 
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           ++     IH+ V++   + NVFV  AL+D+YAKCG +  +  LF    E++   WN +I 
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYG 573
           GY   G G+ A+ LF+ ML    +P ++T+   + A +    +E G  IH  T +K  Y 
Sbjct: 382 GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLT-IKTMYN 440

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
            + V+ +  +++D+  + GR+++A     KM  +  ++ + A++    IH    LG +A 
Sbjct: 441 KDSVVAN--SLIDMYAKCGRIDDARLTFDKMDKQDEVS-WNALICGYSIHG---LGMEAL 494

Query: 634 NRLFEL 639
           N LF++
Sbjct: 495 N-LFDM 499


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/657 (39%), Positives = 400/657 (60%), Gaps = 2/657 (0%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G  +HG L+  GF         +++ YAK  +IE+A  +FD MP+RD++SWN+I+ G A 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG  + A++L  RM  EG+  D  T++S++PA        IG  VHGY++R G  S  ++
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             AL+DMY+ C    +   +F  M+ +NVVSW +MI +Y   G+ ++   +FQ+M  +G+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P    I  AL A A    L+ G  VH    +  +   + + N+L+ MY KC  ++ A  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           IF  +  K  +SWN +I GY+++   NEA   F +M  + ++P++ TM  ++PA A LS 
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSS 301

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   + +HA  +R  + ++ FV  AL+DMY KCGA+  AR LFDM+  +++ +W +MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           YG HG G+ A+ LF +M     +P+  +F   + ACSHSGL +EG  +F +++ ++ IEP
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            + HY  MVDLL   G L EA++FI+ MPIEP  +++ ++L  C+IH+NV+L EK A  +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           FEL+P+  GY+VLLANIYA A  W+ + K++  +  +GL++  GCS +E++ + H F++ 
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLL 755
           +  HPQ  RI  FL+ +   ++  G+ P    ++   +D V +  L  HS KLA+AFG+L
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 601

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           N S G  I + KN RVC  CH A K+IS + GREII+RD +RFH F+ G CSC  YW
Sbjct: 602 NLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 219/461 (47%), Gaps = 5/461 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G   Q      L+S + K N + DA  VF+ +P +    +++++ G A     D A
Sbjct: 10  LVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKA 69

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           V   +RM  +           ++  C        G  +HG  +  G   +      +++M
Sbjct: 70  VELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDM 129

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+ C       K+F  M ++++VSW  ++  + + G  +    L   M  EG R D   I
Sbjct: 130 YSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAI 189

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S L A A   SL+ GK+VHGYA+R G + ++ V+ AL++MY KCG +E AR +FD +  
Sbjct: 190 TSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTK 249

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++ +SWN++I  Y       EA  +F +ML Q + P  VT+   L A A L  LERG  +
Sbjct: 250 KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREM 308

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H    +     D  + N+L+ MY KC  +  A  +F  L  K L+SW  MI GY  +GR 
Sbjct: 309 HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRG 368

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW--IHALVIRSCFEKNVFVMT 480
            +A+  F +M+   I+PD+ +  +++ A +  S +R   W   +A+      E  +    
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAILYACSH-SGLRDEGWRFFNAMRNEHRIEPKLKHYA 427

Query: 481 ALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            ++D+    G +  A    + M  E   + W  ++ G   H
Sbjct: 428 CMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SLK  + +    I++G+ +       L+ ++ K   + +A  +F+ +  K    ++T++ 
Sbjct: 201 SLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIG 260

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY++    ++A +    M    + P       +L     +  + RG+E+H   +  G+  
Sbjct: 261 GYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLE 319

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D F    +V+MY KCG +  A ++FD +  ++L+SW  ++AG+  +G    A+ L  +M 
Sbjct: 320 DNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMK 379

Query: 232 EEGRRGDFITIVSILPAVANVG 253
             G + D  +  +IL A ++ G
Sbjct: 380 GSGIQPDAGSFSAILYACSHSG 401



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           P+A  L   +SL+  R +    ++ G  + +     LV ++ K  +L  A R+F+ + +K
Sbjct: 294 PAAASL---SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNK 350

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  M+ GY       DA++   +M+   + P   +++ +L  C   G    G    
Sbjct: 351 NLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFF 410

Query: 162 GQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
             +  N   ++  L     +V++    G ++EAY+  + MP E D   W +++ G
Sbjct: 411 NAM-RNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 283/785 (36%), Positives = 456/785 (58%), Gaps = 37/785 (4%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           PS    H  A  L+ C    E  R   L   I+K G C        L++++ K + L DA
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCG 149
           +++F+ +P++    + T+++GYA+     +A+   +R+  +  ++ P V+     L V  
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSM 152

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           D GE+  G  IH  +   G   + F  T +++ Y+ CG+++ A ++FD +  +D+VSW  
Sbjct: 153 DCGELGWG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTG 210

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V  FA+N   + AL L ++M   G + +  T  S+  A   + +  +GK+VHG A+++ 
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           ++  + V  AL+D+Y K G ++ AR  F+ +  ++V+ W+ MIA Y +    +EA+ +F 
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M    V P   T    L ACA +  L  G  +H  + ++ L +DV ++N+L+ +Y+KC 
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 390 KVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           +++ +  +F++   +  V+ WN +I+G+ Q G   +AL  F  M    ++    T  S +
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 450

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A L+ +     IH+L +++ F+K++ V  ALIDMYAKCG++  AR +FD+MN++   
Sbjct: 451 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 510

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +WN MI GY  HGL                            AC+++GL+++G  YFTS+
Sbjct: 511 SWNAMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSM 542

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            +D+GIEP ++HY  MV LLGR G L++A   I ++P +P + V+ A+LGAC IH ++EL
Sbjct: 543 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIEL 602

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G  +A  + E++P +   HVLL+N+YA A  WD +A VR  M++KG++K PG S +E + 
Sbjct: 603 GRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQG 662

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEK 747
            VHSF  G T HP+ + I   LE L  + K AGY+P+ N +  DVED  +E LL  HSE+
Sbjct: 663 TVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSER 722

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           LA++FG++ +  GS I I KNLR+C DCH A K IS V  REI+VRD++RFH F+ G+CS
Sbjct: 723 LALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCS 782

Query: 808 CGDYW 812
           CGDYW
Sbjct: 783 CGDYW 787



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 253/470 (53%), Gaps = 9/470 (1%)

Query: 134 VAPVVYN---YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           V+P  +N   Y   L+ C    E  RGK +H +++  G  LDLFA   ++NMY K   + 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           +A K+FD MPER+ +S+ T++ G+A++     A++L  R+H EG   +     +IL  + 
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           ++    +G  +H    + G +S   V TAL+D Y+ CGRV+ AR VFDG+  +++VSW  
Sbjct: 151 SMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTG 210

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           M+  + E    +EA+++F +M   G +P N T      AC  L   + G  VH    + +
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              D+ +  +L+ +Y+K   +D A   F ++  K ++ W+ MI  YAQ+ +  EA+  F 
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           +MR   + P+ FT  SV+ A A +  +     IH  VI+     +VFV  AL+D+YAKCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 491 AVGTARALFDMMNERH-VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
            +  +  LF     R+ VT WN +I G+   G G+ A+ LF  MLE   +  ++T+  A+
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 450

Query: 550 SACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            AC+    +E G  IH  T +K  +  + V+ +  A++D+  + G + +A
Sbjct: 451 RACASLAALEPGLQIHSLT-VKTTFDKDIVVTN--ALIDMYAKCGSIKDA 497


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/724 (37%), Positives = 425/724 (58%), Gaps = 2/724 (0%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F    D    +++  L  Y +     +AV     M    V      Y  +L V   
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +  +  GK+IHG ++  G+   +      +NMY K G +  A +MF +M E DL+SWNT+
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAG 269
           ++G A++G  E +L L   +   G   D  TI S+L A +++  S  +G+ VH  A++AG
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
                 VSTAL+D+Y+K G++E A L+F      ++ SWN+M+  +    N  EA+R+F 
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            M ++G +   +T   A  A   L  L++G  +H ++ +++   D+ + + ++ MY KC 
Sbjct: 490 LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           ++  A  +F+++     V+W  +I G  +NG   +AL  + +MR   ++PD +T  +++ 
Sbjct: 550 EMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVK 609

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A + L+ +   K IHA +++     + FVMT+L+DMYAKCG +  A  LF  MN R V  
Sbjct: 610 ACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL 669

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN MI G   HG  + A+  FN+M      P+ +TF+  +SACSHSGL  +    F S++
Sbjct: 670 WNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ 729

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           K YG+EP ++HY  +VD L RAG + EA   +  MP E   T++  +L AC++  + E G
Sbjct: 730 KTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETG 789

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           E+ A +LF +DP +   +VLL+NIYAAA+ W+     R +M++  ++K PG S +++KN+
Sbjct: 790 ERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNK 849

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKL 748
           VH F +G   H ++  IY  +E ++  IK  GYVPDT  ++ D+E+  +E+ LS HSEKL
Sbjct: 850 VHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKL 909

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           AIA+GL+ + P +T+ + KNLRVCGDCHNA KYIS V  REI++RD +RFH F++G+CSC
Sbjct: 910 AIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSC 969

Query: 809 GDYW 812
           GDYW
Sbjct: 970 GDYW 973



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 181/713 (25%), Positives = 302/713 (42%), Gaps = 88/713 (12%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYA 114
           +R   +I+ SGL         L++++ K  SL  A ++F+  P  D+    Y+ +L  YA
Sbjct: 33  KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYA 92

Query: 115 KFASLDD------AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
               L D      A      +R   +    +  + L K+C   G     + + G  +  G
Sbjct: 93  HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG 152

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
              D+F    +VN+YAK  +I EA  +FDRMP RD+V WN ++  + + G  +  L L +
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFS 212

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
             H  G R D +++ +IL                   M  G  ++       V  YA   
Sbjct: 213 AFHRSGLRPDCVSVRTIL-------------------MGVGKKTVFERELEQVRAYA--- 250

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
              T   V D     +V  WN  +++Y++ G   EA+  F+ M+   V   ++T +  L 
Sbjct: 251 ---TKLFVCD--DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILS 305

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
             A L  LE G  +H  + +      VS+ NS I+MY K   V+ A  +F +++   L+S
Sbjct: 306 VVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS 365

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL-SVIRYAKWIHALV 467
           WN +I G A++G    +L  F  +    + PD FT+ SV+ A + L       + +H   
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCA 425

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +++    + FV TALID+Y+K G +  A  LF   +   + +WN M+ G+      + A+
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT-SLKKDYGIEPVMDHYGAM 584
            LF+ M E   K + ITF  A  A      +++G  IH     ++  Y +  +      +
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVI----SGI 541

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN-------RLF 637
           +D+  + G +  A     ++P  P    +  ++  C     VE GE+          RL 
Sbjct: 542 LDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC-----VENGEEEQALFTYHQMRLA 595

Query: 638 ELDPDEGGYHVLL----------------ANI---------YAAASMWDKLAKVRTIMEK 672
            + PDE  +  L+                ANI         +   S+ D  AK   I + 
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDA 655

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
            GL +      V L N   +   G  +H  ++    F     +E+K+ G  PD
Sbjct: 656 YGLFRRMNTRSVALWN---AMIVGLAQHGNAEEALNFF----NEMKSRGVTPD 701



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 250/532 (46%), Gaps = 60/532 (11%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGF 214
           GK  H  ++ +G + D +    ++ MYAKCG +  A K+FD  P+  RDLV++N I+A +
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 215 AQNGFAELALDLVTRMHEEG------RRGDFITIVSILPAVANV----GSLRIGKAVHGY 264
           A  G     L  V + HE        R+   +T    L  +  +    GS    +A+ GY
Sbjct: 92  AHTG----ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGY 147

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A++ G    V V+ ALV++YAK  R+  AR++FD M  R+VV WN M+ AYVE G  +E 
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F      G+ P  V++   L     +G  ++ +F  + L+Q++            + 
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTIL-----MGVGKKTVF-ERELEQVR------------AY 249

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
            +K    D  +D+           WN  +  Y Q G   EA++ F  M    +  DS T 
Sbjct: 250 ATKLFVCDDDSDV---------TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTY 300

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           + ++  +A L+ +   K IH  V+R  +++ V V  + I+MY K G+V  AR +F  M E
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS---HSGLVEEG 561
             + +WN +I G    GL + ++ LF  +L     P+  T    + ACS    S  V   
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQ 420

Query: 562 IHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           +H   +LK   GI  V+D +   A++D+  + G++ EA + +        +  + AM+  
Sbjct: 421 VHT-CALKA--GI--VLDSFVSTALIDVYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHG 474

Query: 620 CKIHKNVELGEKAANRLFEL--DPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             +  N     + A RLF L  +  E    +  AN   AA    +L + + I
Sbjct: 475 FTVSDNY----REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI 522



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 2/282 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L++ ++I  ++IK          + ++ ++ K   +  A +VF  IP   D  + T++ G
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
             +    + A+    +MR   V P  Y +  L+K C  +  + +GK+IH  ++    + D
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD 635

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
            F MT +V+MYAKCG IE+AY +F RM  R +  WN ++ G AQ+G AE AL+    M  
Sbjct: 636 PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKS 695

Query: 233 EGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            G   D +T + +L A ++ G +    K         G +  +   + LVD  ++ G ++
Sbjct: 696 RGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQ 755

Query: 292 TARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            A  V   M    +   + +++ A    G+ E   R+ +K+ 
Sbjct: 756 EAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 167/385 (43%), Gaps = 37/385 (9%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD--GMK 301
           SIL        L +GK  H   + +G +    V+  L+ MYAKCG + +AR +FD     
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 302 SRNVVSWNSMIAAYVEGGN------PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
            R++V++N+++AAY   G         EA  IF+ +    +  T  T+      C   G 
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
                 +     ++ L  DV +  +L+++Y+K +++  A  +F ++  + +V WN M+  
Sbjct: 138 PSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKA 197

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y + G  +E L  F       ++PD  ++ +++  + + +V               FE+ 
Sbjct: 198 YVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTV---------------FERE 242

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           +  + A             A  LF   ++  VT WN  +  Y   G G  AV+ F  M++
Sbjct: 243 LEQVRAY------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIK 290

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
                + +T++  +S  +    +E G     ++ + +G +  +    + +++  +AG +N
Sbjct: 291 SRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSVANSAINMYVKAGSVN 349

Query: 596 EAWDFIQKMPIEPGITVFGAMLGAC 620
            A     +M  E  +  +  ++  C
Sbjct: 350 YARRMFGQMK-EVDLISWNTVISGC 373



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 23/203 (11%)

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           C +   ++ P  F+++    A+A+  +I   K  HA+++ S    + +V   LI MYAKC
Sbjct: 5   CSVSPSSLLPQWFSILR--HAIADSDLI-LGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61

Query: 490 GAVGTARALFDM--MNERHVTTWNVMIDGYG----THGLGKA--AVELF-----NKMLEG 536
           G++ +AR LFD+   ++R + T+N ++  Y      H + K   A  +F     + ML  
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
               + +  LC +     +    +G      L+ D  +       GA+V++  +  R+ E
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA------GALVNIYAKFQRIRE 175

Query: 597 AWDFIQKMPIEPGITVFGAMLGA 619
           A     +MP+   + ++  M+ A
Sbjct: 176 ARVLFDRMPVRD-VVLWNVMMKA 197


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/670 (39%), Positives = 406/670 (60%), Gaps = 37/670 (5%)

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGD 238
           + +Y+  G ++ A  +FD++P+ DL +W  +++   ++G +  A+       H+     D
Sbjct: 18  IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
            + ++S+  A A++  +   K VH  A+R GF S V +  AL+DMY KC   E ARLVF+
Sbjct: 78  KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
           GM  R+V+SW SM + YV  G   EA+  F+KM   G  P +VT+   L AC DL DL+ 
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY-- 416
           G  VH  + +  +G +V ++++L++MY+ C  + +A  +F  +  +  VSWN +I  Y  
Sbjct: 198 GREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFL 257

Query: 417 ---------------------------------AQNGRVNEALNYFCKMRSKNIKPDSFT 443
                                             QNGR  +AL    +M++   KP+  T
Sbjct: 258 NKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQIT 317

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           + SV+PA   L  +R  K IH  + R  F +++   TAL+ MYAKCG +  +R +F MM 
Sbjct: 318 ITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMT 377

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           +R   +WN MI     HG G+ A+ LF +M++   +PN +TF   +S CSHS LV+EG+ 
Sbjct: 378 KRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLL 437

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F S+ +D+ +EP  DH+  MVD+L RAGRL EA++FI+KMPIEP    +GA+LG C+++
Sbjct: 438 IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVY 497

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           KNVELG  AANRLFE++ D  G +VLL+NI  +A +W + ++ R +M  +G+ K PGCS 
Sbjct: 498 KNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSW 557

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           ++++N VH+F  G   + QS  IY FL+ + ++++ AGY+P+T+ +  DV+   +E +L 
Sbjct: 558 IQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLC 617

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
           +HSEKLA+AFG+LN +  S+I + KNLR+CGDCHNA K+++ + G +IIVRD  RFH F+
Sbjct: 618 NHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFR 677

Query: 803 NGVCSCGDYW 812
           +G+CSC D+W
Sbjct: 678 DGLCSCQDFW 687



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 232/484 (47%), Gaps = 58/484 (11%)

Query: 25  KHTLSQRAYIPSRIYRH-----PSALLL----EVCTSLKEL---RRILPLIIKSGLCDQH 72
           KH  S  A      +RH     P  LLL    + C SL+++   +R+    I+ G C   
Sbjct: 54  KHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDV 113

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           L    L+ ++ K      A  VFE +P +    + +M   Y     L +A+    +M  +
Sbjct: 114 LLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLN 173

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
              P     + +L  C D+ +++ G+E+HG ++ NG   ++F  + +VNMYA C  I +A
Sbjct: 174 GERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQA 233

Query: 193 YKMFDRMPERDLVS-----------------------------------WNTIVAGFAQN 217
             +FD M  RD VS                                   WN ++ G  QN
Sbjct: 234 QLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQN 293

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  E AL++++RM   G + + ITI S+LPA  N+ SLR GK +HGY  R  F   +  +
Sbjct: 294 GRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTT 353

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           TALV MYAKCG +E +R VF  M  R+ VSWN+MI A    GN EEA+ +F++M+D GV 
Sbjct: 354 TALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVR 413

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           P +VT    L  C+    ++ G+ +   + +   +  D    + ++ + S+  +++ A +
Sbjct: 414 PNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYE 473

Query: 397 IFSKLQ-GKTLVSWNAMILG-----YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
              K+    T  +W A++ G       + GR+  A N   ++ S N  P ++ ++S I  
Sbjct: 474 FIKKMPIEPTAGAWGALLGGCRVYKNVELGRI--AANRLFEIESDN--PGNYVLLSNILV 529

Query: 451 LAEL 454
            A+L
Sbjct: 530 SAKL 533



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 159/300 (53%), Gaps = 6/300 (2%)

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEP 338
            + +Y+  G ++ AR +FD +   ++ +W  +I+A  + G   EA++ +     +  VEP
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAAD 396
             + ++    ACA L D+     VH+  D ++ G  +DV + N+LI MY KC+  + A  
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHE--DAIRFGFCSDVLLGNALIDMYGKCRCSEGARL 134

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +  + ++SW +M   Y   G + EAL  F KM     +P+S T+ S++PA  +L  
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD 194

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           ++  + +H  V+R+    NVFV +AL++MYA C ++  A+ +FD M+ R   +WNV+I  
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  +   +  + +F +M+      N  ++   I  C  +G  E+ +   + + ++ G +P
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKP 313



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 1/190 (0%)

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           +L +L       +    I +YS    + RA  +F K+    L +W  +I    ++GR  E
Sbjct: 1   MLSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLE 60

Query: 425 ALNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           A+ Y+   R KN ++PD   ++SV  A A L  +  AK +H   IR  F  +V +  ALI
Sbjct: 61  AIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALI 120

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMY KC     AR +F+ M  R V +W  M   Y   GL + A+  F KM     +PN +
Sbjct: 121 DMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180

Query: 544 TFLCAISACS 553
           T    + AC+
Sbjct: 181 TVSSILPACT 190


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 271/740 (36%), Positives = 447/740 (60%), Gaps = 6/740 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
           L++++ K+  +  A +VF+ +P +    +++++    +    +++      +   D  + 
Sbjct: 237 LIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLM 296

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P V     ++ +C   GE+R G   HG  +  G   +L   + +++MY+KCG + EA  +
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGS 254
           FD   E++++SWN+++ G++++     A +L+ +M  E + + + +T++++LP       
Sbjct: 357 FD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQ 415

Query: 255 LRIGKAVHGYAMRAGF-DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
               K +HGYA+R GF  S   V+ A V  YAKCG +  A  VF GM+S+ V SWN++I 
Sbjct: 416 FLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIG 475

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            +V+ G P +A+ ++  M   G+EP   TI   L ACA L  L  G  +H  + +     
Sbjct: 476 GHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL 535

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  +  SL+S+Y +C K+  A   F  ++ K LV WN MI G++QN    +AL+ F +M 
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQML 595

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           S  I PD  +++  + A +++S +R  K +H   ++S   ++ FV  +LIDMYAKCG + 
Sbjct: 596 SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCME 655

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            ++ +FD ++ +   TWNV+I GYG HG G+ A+ELF  M     +P+ +TF+  ++AC+
Sbjct: 656 QSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACN 715

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV EG+ Y   ++  +GI+P ++HY  +VD+LGRAGRLNEA + + ++P +P   ++
Sbjct: 716 HAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIW 775

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            ++L +C+ ++++++GEK AN+L EL PD+   +VL++N YA    WD++ K+R  M++ 
Sbjct: 776 SSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEI 835

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           GLQK  GCS +E+  +V  F  G     QS +I      L  +I   GY PDT+ + H++
Sbjct: 836 GLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHEL 895

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  +  +L +HSEKLAI+FGLLN++ G+T+ + KNLR+C DCHNA K +S +  REIIV
Sbjct: 896 EEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIV 955

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FKNG CSCGDYW
Sbjct: 956 RDNKRFHHFKNGFCSCGDYW 975



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/621 (28%), Positives = 323/621 (52%), Gaps = 18/621 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            LLL++C   K +   R+I   I  S    +  +  T+LV+++   +S  D+  VF    
Sbjct: 97  GLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR 156

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            K   L++ +L GY + +   DAV   + M    +  P  +    ++K C  V ++R G+
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +HG  +      D+F    ++ MY K G +E A K+FD+MP+R+LVSWN+++    +NG
Sbjct: 217 AVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENG 276

Query: 219 FAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
             E +  L   +   +EG   D  T+V+++P  A  G +R+G   HG A++ G    + V
Sbjct: 277 VFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKV 336

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQG 335
           +++L+DMY+KCG +  AR++FD    +NV+SWNSMI  Y +  +   A  + +KM ++  
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK 395

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           V+   VT++  L  C +     +   +H   L    + +D  + N+ ++ Y+KC  +  A
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F  ++ K + SWNA+I G+ QNG   +AL+ +  MR   ++PD FT+ S++ A A L
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +   K IH  ++R+ FE + F+  +L+ +Y +CG +  A+  FD M E+++  WN MI
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
           +G+  +     A+++F++ML     P++I+ + A+ ACS    +  G        K +  
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT 635

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVELGE 630
           E       +++D+  + G + ++ +   ++ ++  +T +  ++    IH    K +EL +
Sbjct: 636 EHSFV-TCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITGYGIHGHGRKAIELFK 693

Query: 631 KAANRLFELDPDEGGYHVLLA 651
              N  F   PD   +  LL 
Sbjct: 694 SMQNAGFR--PDSVTFIALLT 712


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/681 (37%), Positives = 422/681 (61%), Gaps = 5/681 (0%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           + P+  ++  +L+   D+  +   ++IH Q+I +G + + F    ++N Y  CG + +A 
Sbjct: 20  LCPLAQSHASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK 76

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++F   P +++VSW  +++G A+N     A+D+   M     + + +TI S+LPA AN+G
Sbjct: 77  QIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLG 136

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +RI K+VH + +R GF+  V V TALVDMY+K G +  AR +F+ M  RNVVSWN++++
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVS 196

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G  EEA+ +F  M  +G+     TIM  + A   +G L+ G  +H  + +     
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  +  +L+ +Y     VD A  +FS++  K + +W  M+ G++     + A+ +F KM 
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316

Query: 434 S-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             +N+K DS  ++ ++ + +    ++  + +HAL I++CF  N+FV +A+IDMYA CG +
Sbjct: 317 GIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNL 376

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+  F  M E+ V  WN MI G G +G G  A++LF +M      P++ TF+  + AC
Sbjct: 377 EDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+G+V EG+  F  + K     P + HY  ++D+LGRAG+L+ A+ FI  MP +P   V
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDV 496

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +  +LGAC+IH N++LG + + ++FE++P++ GY+VLL+N+YA A  W+ +   R  +  
Sbjct: 497 YSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRS 556

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHD 731
           K L+K PG S +E+  E+++F +G   HPQ  +I   L+ LI +IK AGYVP+TN  + D
Sbjct: 557 KRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQD 616

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           V D +++++L  HSEK+AIAFGL+ + PG+ I I KNLR C DCH+A+K++S V GR ++
Sbjct: 617 VSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLV 676

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           ++D +RFH F++GVCSC DYW
Sbjct: 677 IKDANRFHVFQDGVCSCRDYW 697



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 264/510 (51%), Gaps = 5/510 (0%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A +L     LK L++I   II SGL         L++ +     L+DA ++F   P K  
Sbjct: 28  ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNV 87

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             +  ++ G AK     +A+     M   +  P     + +L    ++G IR  K +H  
Sbjct: 88  VSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            +  GF  ++F  T +V+MY+K G +  A ++F+ M ER++VSWN IV+G++ +GF+E A
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEA 207

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +DL   M  +G   DF TI+S++PA  +VG L++G  +HG+ +R G+++  ++ TAL+D+
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVT 342
           Y     V+ A  VF  M  ++V +W  M+  +  G + + A++ F KML  Q ++  ++ 
Sbjct: 268 YVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIV 327

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +M  L +C+  G L++G  VH L  +     ++ + +++I MY+ C  ++ A   F  + 
Sbjct: 328 LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG 387

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +V WNAMI G   NG   +A++ F +M+   + PD  T VSV+ A +   ++     
Sbjct: 388 EKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQ 447

Query: 463 IHALVIRSCFE-KNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           I   ++++  +  N+     +ID+  + G +  A +  + M  +     ++ ++     H
Sbjct: 448 IFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIH 507

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           G  K   E+  K+ E   +PND  +   +S
Sbjct: 508 GNIKLGHEISQKIFE--MEPNDAGYYVLLS 535


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/808 (35%), Positives = 466/808 (57%), Gaps = 40/808 (4%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY---NSLSDAARVFEPI 98
           PS+L  + C ++ EL+     + K GL +     TKLV+  C+     SLS A  VFE  
Sbjct: 36  PSSL--KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93

Query: 99  PDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
                  +Y+++++GYA     ++A+   +RM    ++P  Y + + L  C        G
Sbjct: 94  ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            +IHG ++  G++ DLF    +V+ YA+CG+++ A K+FD M ER++VSW +++ G+A+ 
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213

Query: 218 GFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            FA+ A+DL  RM  +E    + +T+V ++ A A +  L  G+ V+ +   +G +    +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +ALVDMY KC  ++ A+ +FD   + N+   N+M + YV  G   EA+ +F  M+D GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P  ++++ A+ +C+ L ++  G   H  + +    +  ++ N+LI MY KC + D A  
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVN-------------------------------EA 425
           IF ++  KT+V+WN+++ GY +NG V+                               EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 426 LNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           +  FC M+S+  +  D  TM+S+  A   L  +  AKWI+  + ++  + +V + T L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           M+++CG   +A ++F+ +  R V+ W   I      G  + A+ELF+ M+E   KP+ + 
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+ A++ACSH GLV++G   F S+ K +G+ P   HYG MVDLLGRAG L EA   I+ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P+EP   ++ ++L AC++  NVE+   AA ++  L P+  G +VLL+N+YA+A  W+ +A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           KVR  M++KGL+K PG S ++++ + H F SG   HP+   I   L+ +       G+VP
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753

Query: 725 D-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           D +N + DV++  +  +LS HSEKLA+A+GL++S+ G+TI I KNLRVC DCH+  K+ S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            V  REII+RD +RFH  + G CSCGD+
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDF 841


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/645 (42%), Positives = 405/645 (62%), Gaps = 33/645 (5%)

Query: 200 PERDLVSW-NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           P R   SW + + +    N F E A+     M   G R D     ++L AV+ +  L+ G
Sbjct: 53  PSRSTASWVDALRSRTRSNDFRE-AISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 259 KAVHGYAMRAGF-DSIVNVSTALVDMYAKCG--------------------RVETARLVF 297
           + +H  A++ G+  S V V+  LV+MY KCG                    RV+ ++ +F
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           +    R++VSWN+MI+++ +     EA+  F+ M+ +GVE   VTI   L AC+ L  L+
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 358 RGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            G  +H  +L    L  +  + ++L+ MY  C++V+    +F  + G+ +  WNAMI GY
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 417 AQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSCFEK 474
           A+NG   +AL  F +M +   + P++ TM SV+PA +  L+ I   K IHA  IR+    
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           ++ V +AL+DMYAKCG +  +R +F+ M  ++V TWNV+I   G HG G+ A+ELF  M+
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411

Query: 535 E-----GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
                 G  KPN++TF+   +ACSHSGL+ EG++ F  +K D+G+EP  DHY  +VDLLG
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 471

Query: 590 RAGRLNEAWDFIQKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           RAG+L EA++ +  MP E   +  + ++LGAC+IH+NVELGE AA  L  L+P+   ++V
Sbjct: 472 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 531

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+NIY++A +W+K  +VR  M + G++K PGCS +E ++EVH F +G   HPQS++++ 
Sbjct: 532 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 591

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
           FLETL ++++  GYVPDT+ + H+V++  +ENLL  HSEKLAIAFG+LN+ PG+TI + K
Sbjct: 592 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 651

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVC DCH ATK+IS +  REIIVRD+ RFH FK G CSCGDYW
Sbjct: 652 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 31/389 (7%)

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           P +  A +   L+   +     +A+S  I M      P  + +  +LK    + +++ G+
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 159 EIHGQLIVNGF-SLDLFAMTGVVNMYAKCG--------------------QIEEAYKMFD 197
           +IH   +  G+ S  +     +VNMY KCG                    +++++  +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
              +RD+VSWNT+++ F+Q+     AL     M  EG   D +TI S+LPA +++  L +
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 258 GKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           GK +H Y +R   D I N  V +ALVDMY  C +VE+ R VFD +  R +  WN+MI+ Y
Sbjct: 233 GKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 316 VEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACA-DLGDLERGIFVHKLLDQLKLGT 373
              G  E+A+ +F +M+   G+ P   T+   + AC   L  + +G  +H    +  L +
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM- 432
           D+++ ++L+ MY+KC  ++ +  +F+++  K +++WN +I+    +G+  EAL  F  M 
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411

Query: 433 ----RSKNIKPDSFTMVSVIPALAELSVI 457
               R    KP+  T ++V  A +   +I
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAACSHSGLI 440



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 161/302 (53%), Gaps = 8/302 (2%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           G+ D+      L++++ K   + D+  +FE   D+    ++TM+  +++     +A++F 
Sbjct: 143 GIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF 202

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD-LFAMTGVVNMYAK 185
             M  + V         +L  C  +  +  GKEIH  ++ N   ++  F  + +V+MY  
Sbjct: 203 RLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCN 262

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVS 244
           C Q+E   ++FD +  R +  WN +++G+A+NG  E AL L   M +  G   +  T+ S
Sbjct: 263 CRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 322

Query: 245 ILPA-VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++PA V ++ ++  GK +H YA+R    S + V +ALVDMYAKCG +  +R VF+ M ++
Sbjct: 323 VMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK 382

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-----VEPTNVTIMEALHACADLGDLER 358
           NV++WN +I A    G  EEA+ +F+ M+ +       +P  VT +    AC+  G +  
Sbjct: 383 NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISE 442

Query: 359 GI 360
           G+
Sbjct: 443 GL 444


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/635 (43%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 193  YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG---RRGDFITIVSILPAV 249
            YK  D+    ++ SWN+++A  A+ G +  AL   + + + G    R  F   +    A+
Sbjct: 1972 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 2028

Query: 250  ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
             ++ S   G+  H  A   GF++ + VS+AL+DMY+KCG+++ AR +FD +  RNVVSW 
Sbjct: 2029 CDLVS---GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085

Query: 310  SMIAAYVEGGNPEEAMRIFQKMLDQGVE-------PTNVTIM-EALHACADLGDLERGIF 361
            SMI  YV+    + A+ +F+  L++  E       P +  +M   L AC+ +    +GI 
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG--KGIT 2143

Query: 362  --VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
              VH  + +      + + N+L+  Y+KC +   +  +F  ++ K  +SWN+MI  YAQ+
Sbjct: 2144 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 2203

Query: 420  GRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
            G   EAL  F  M R   ++ ++ T+ +V+ A A    +R  K IH  VI+   E NV V
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 2263

Query: 479  MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             T++IDMY KCG V  A+  FD M E++V +W  M+ GYG HG  K A+++F KM+    
Sbjct: 2264 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGV 2323

Query: 539  KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            KPN ITF+  ++ACSH+GLVEEG H+F ++K  Y IEP ++HYG MVDL GRAG LNEA+
Sbjct: 2324 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 2383

Query: 599  DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            + I++M ++P   V+G++LGAC+IHKNV+LGE AA +LFELDPD  GY+VLL+N+YA A 
Sbjct: 2384 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 2443

Query: 659  MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
             W  + ++R +M+ + L K PG SLVELK  VH F  G  +HP  + IY +LE L  E++
Sbjct: 2444 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 2503

Query: 719  AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
              GYVP+  S+ HDV++  +E +L  HSEKLA+AFG++NS+PG+TI+I KNLRVCGDCH 
Sbjct: 2504 KIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHT 2563

Query: 778  ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              K IS +  R+ +VRD  RFH FK+GVCSCGDYW
Sbjct: 2564 VIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 230/440 (52%), Gaps = 15/440 (3%)

Query: 106  YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            +++++   A+     +A+     +R   + P   ++   +K C  + ++  G+  H Q  
Sbjct: 1983 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 2042

Query: 166  VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            V GF  DLF  + +++MY+KCGQ+++A  +FD +P R++VSW +++ G+ QN  A+ AL 
Sbjct: 2043 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 2102

Query: 226  LVTRMHEEGRRG--------DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            L     EE            D + +VS+L A + V    I + VHG+ ++ GFD  + V 
Sbjct: 2103 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 2162

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GV 336
              L+D YAKCG+   ++ VFD M+ ++ +SWNSMIA Y + G   EA+ +F  M+   GV
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 2222

Query: 337  EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
                VT+   L ACA  G L  G  +H  + ++ L  +V +  S+I MY KC +V+ A  
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282

Query: 397  IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
             F +++ K + SW AM+ GY  +GR  EAL+ F KM    +KP+  T VSV+ A +   +
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 2342

Query: 457  IRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMI 514
            +     W +A+  +   E  +     ++D++ + G +  A  L   M  +     W  ++
Sbjct: 2343 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402

Query: 515  DGYGTH---GLGK-AAVELF 530
                 H    LG+ AA +LF
Sbjct: 2403 GACRIHKNVDLGEIAAQKLF 2422



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 201/381 (52%), Gaps = 31/381 (8%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
           + N  + +  + +H   +R+G  +   ++  L+ +Y+  GR+  A L+F  +++    +W
Sbjct: 34  LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTW 93

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N +I A    G  E+A+ +++ M+ QG+     T    + AC +   ++ G  VH  L +
Sbjct: 94  NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-------------------------- 402
                DV + N+LI  Y KC     A  +F K++                          
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213

Query: 403 -----GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
                 K +VSW AMI GY +N +  EAL  F +M+++NI P+ +TMVS+I A  E+ ++
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              + IH   I++C E  V++ TALIDMY+KCG++  A  +F+ M  + + TWN MI   
Sbjct: 274 TLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
           G HGLG+ A+ LF++M     KP+ ITF+  + AC H   V+EG  YFT + + YGI P+
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393

Query: 578 MDHYGAMVDLLGRAGRLNEAW 598
            +HY  M +L  R+  L+EA+
Sbjct: 394 PEHYECMTELYARSNNLDEAF 414



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 32/382 (8%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
            LL+ C + K LR+I   II+SGL +  L   KL+ L+  +  ++ A  +F  I +    
Sbjct: 32  FLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTF 91

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
            ++ +++        + A+     M    +A   + + +++K C +   I  GK +HG L
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQ-------------------------------IEEAY 193
           I  GFS D+F    +++ Y KCG                                ++EA 
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD +P +++VSW  ++ G+ +N   E AL+L  RM  E    +  T+VS++ A   +G
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L +G+ +H YA++   +  V + TAL+DMY+KCG ++ A  VF+ M  +++ +WNSMI 
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLG 372
           +    G  +EA+ +F +M    V+P  +T +  L AC  + +++ G  +  ++     + 
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391

Query: 373 TDVSMTNSLISMYSKCKKVDRA 394
                   +  +Y++   +D A
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 200/403 (49%), Gaps = 36/403 (8%)

Query: 47   LEVCTSLKEL-----RRILPLIIKS--GLCD--------QHLF----------QTKLVSL 81
            L   +SL++L     R   P  IKS   LCD        Q  F           + L+ +
Sbjct: 2000 LRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDM 2059

Query: 82   FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
            + K   L DA  +F+ IP +    + +M+ GY +    D+A+        ++      N 
Sbjct: 2060 YSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNN 2119

Query: 142  TYL--------LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
              L        L  C  V      + +HG ++  GF   +     +++ YAKCGQ   + 
Sbjct: 2120 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 2179

Query: 194  KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANV 252
            K+FD M E+D +SWN+++A +AQ+G +  AL++   M    G R + +T+ ++L A A+ 
Sbjct: 2180 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 2239

Query: 253  GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            G+LR GK +H   ++   +  V V T+++DMY KCGRVE A+  FD MK +NV SW +M+
Sbjct: 2240 GALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMV 2299

Query: 313  AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKL 371
            A Y   G  +EA+ IF KM+  GV+P  +T +  L AC+  G +E G  + + +  +  +
Sbjct: 2300 AGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI 2359

Query: 372  GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
               +     ++ ++ +   ++ A ++  +++ K   V W +++
Sbjct: 2360 EPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 51/331 (15%)

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L  C +   L +   +H  + +  L  D  +T  LI +YS   ++  A  +F ++Q    
Sbjct: 34  LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            +WN +I     NG   +AL  +  M  + I  D FT   VI A      I   K +H  
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150

Query: 467 VIRSCFEKNVFVMTALIDMYAKCG-------------------------------AVGTA 495
           +I+  F  +VFV   LID Y KCG                                +  A
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FD +  ++V +W  MI+GY  +   + A+ELF +M      PN+ T +  I AC+  
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270

Query: 556 GLVE--EGIHYFTSLKKDYGIEPVMD---HYG-AMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           G++    GIH       DY I+  ++   + G A++D+  + G + +A +  + MP    
Sbjct: 271 GILTLGRGIH-------DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKS 322

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           +  + +M+ +  +H    LG++A N   E++
Sbjct: 323 LPTWNSMITSLGVHG---LGQEALNLFSEME 350



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 11/231 (4%)

Query: 91   AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCG 149
            + +VF+ + +K D  +++M+  YA+     +A+     M R+  V       + +L  C 
Sbjct: 2178 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 2237

Query: 150  DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
              G +R GK IH Q+I      ++   T +++MY KCG++E A K FDRM E+++ SW  
Sbjct: 2238 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 2297

Query: 210  IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-----KAVHGY 264
            +VAG+  +G A+ ALD+  +M   G + ++IT VS+L A ++ G +  G        H Y
Sbjct: 2298 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 2357

Query: 265  AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
             +  G +        +VD++ + G +  A  +   MK + + V W S++ A
Sbjct: 2358 DIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/635 (43%), Positives = 402/635 (63%), Gaps = 23/635 (3%)

Query: 193  YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG---RRGDFITIVSILPAV 249
            YK  D+    ++ SWN+++A  A+ G +  AL   + + + G    R  F   +    A+
Sbjct: 1099 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 1155

Query: 250  ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
             ++ S   G+  H  A   GF++ + VS+AL+DMY+KCG+++ AR +FD +  RNVVSW 
Sbjct: 1156 CDLVS---GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 310  SMIAAYVEGGNPEEAMRIFQKMLDQGVE-------PTNVTIM-EALHACADLGDLERGIF 361
            SMI  YV+    + A+ +F+  L++  E       P +  +M   L AC+ +    +GI 
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG--KGIT 1270

Query: 362  --VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
              VH  + +      + + N+L+  Y+KC +   +  +F  ++ K  +SWN+MI  YAQ+
Sbjct: 1271 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 1330

Query: 420  GRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
            G   EAL  F  M R   ++ ++ T+ +V+ A A    +R  K IH  VI+   E NV V
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390

Query: 479  MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             T++IDMY KCG V  A+  FD M E++V +W  M+ GYG HG  K A+++F KM+    
Sbjct: 1391 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGV 1450

Query: 539  KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            KPN ITF+  ++ACSH+GLVEEG H+F ++K  Y IEP ++HYG MVDL GRAG LNEA+
Sbjct: 1451 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 1510

Query: 599  DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            + I++M ++P   V+G++LGAC+IHKNV+LGE AA +LFELDPD  GY+VLL+N+YA A 
Sbjct: 1511 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570

Query: 659  MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
             W  + ++R +M+ + L K PG SLVELK  VH F  G  +HP  + IY +LE L  E++
Sbjct: 1571 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 1630

Query: 719  AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
              GYVP+  S+ HDV++  +E +L  HSEKLA+AFG++NS+PG+TI+I KNLRVCGDCH 
Sbjct: 1631 KIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHT 1690

Query: 778  ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              K IS +  R+ +VRD  RFH FK+GVCSCGDYW
Sbjct: 1691 VIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 230/440 (52%), Gaps = 15/440 (3%)

Query: 106  YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            +++++   A+     +A+     +R   + P   ++   +K C  + ++  G+  H Q  
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169

Query: 166  VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            V GF  DLF  + +++MY+KCGQ+++A  +FD +P R++VSW +++ G+ QN  A+ AL 
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229

Query: 226  LVTRMHEEGRRG--------DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            L     EE            D + +VS+L A + V    I + VHG+ ++ GFD  + V 
Sbjct: 1230 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 1289

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GV 336
              L+D YAKCG+   ++ VFD M+ ++ +SWNSMIA Y + G   EA+ +F  M+   GV
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349

Query: 337  EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
                VT+   L ACA  G L  G  +H  + ++ L  +V +  S+I MY KC +V+ A  
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409

Query: 397  IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
             F +++ K + SW AM+ GY  +GR  EAL+ F KM    +KP+  T VSV+ A +   +
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 1469

Query: 457  IRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMI 514
            +     W +A+  +   E  +     ++D++ + G +  A  L   M  +     W  ++
Sbjct: 1470 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529

Query: 515  DGYGTH---GLGK-AAVELF 530
                 H    LG+ AA +LF
Sbjct: 1530 GACRIHKNVDLGEIAAQKLF 1549



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 197/371 (53%), Gaps = 31/371 (8%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + +H   +R+G  +   ++  L+ +Y+  GR+  A L+F  +++    +WN +I A    
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  E+A+ +++ M+ QG+     T    + AC +   ++ G  VH  L +     DV + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 379 NSLISMYSKCK-------------------------------KVDRAADIFSKLQGKTLV 407
           N+LI  Y KC                                 +  A  IF ++  K +V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SW AMI GY +N +  EAL  F +M+++NI P+ +TMVS+I A  E+ ++   + IH   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I++C E  V++ TALIDMY+KCG++  A  +F+ M  + + TWN MI   G HGLG+ A+
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF++M     KP+ ITF+  + AC H   V+EG  YFT + + YGI P+ +HY  M +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 588 LGRAGRLNEAW 598
             R+  L+EA+
Sbjct: 404 YARSNNLDEAF 414



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 32/382 (8%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
            LL+ C + K LR+I   II+SGL +  L   KL+ L+  +  ++ A  +F  I +    
Sbjct: 32  FLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTF 91

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
            ++ +++        + A+     M    +A   + + +++K C +   I  GK +HG L
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQ-------------------------------IEEAY 193
           I  GFS D+F    +++ Y KCG                                ++EA 
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD +P +++VSW  ++ G+ +N   E AL+L  RM  E    +  T+VS++ A   +G
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L +G+ +H YA++   +  V + TAL+DMY+KCG ++ A  VF+ M  +++ +WNSMI 
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLG 372
           +    G  +EA+ +F +M    V+P  +T +  L AC  + +++ G  +  ++     + 
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391

Query: 373 TDVSMTNSLISMYSKCKKVDRA 394
                   +  +Y++   +D A
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 200/403 (49%), Gaps = 36/403 (8%)

Query: 47   LEVCTSLKEL-----RRILPLIIKS--GLCD--------QHLF----------QTKLVSL 81
            L   +SL++L     R   P  IKS   LCD        Q  F           + L+ +
Sbjct: 1127 LRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDM 1186

Query: 82   FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
            + K   L DA  +F+ IP +    + +M+ GY +    D+A+        ++      N 
Sbjct: 1187 YSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNN 1246

Query: 142  TYL--------LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
              L        L  C  V      + +HG ++  GF   +     +++ YAKCGQ   + 
Sbjct: 1247 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 1306

Query: 194  KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANV 252
            K+FD M E+D +SWN+++A +AQ+G +  AL++   M    G R + +T+ ++L A A+ 
Sbjct: 1307 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 1366

Query: 253  GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            G+LR GK +H   ++   +  V V T+++DMY KCGRVE A+  FD MK +NV SW +M+
Sbjct: 1367 GALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMV 1426

Query: 313  AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKL 371
            A Y   G  +EA+ IF KM+  GV+P  +T +  L AC+  G +E G  + + +  +  +
Sbjct: 1427 AGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI 1486

Query: 372  GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
               +     ++ ++ +   ++ A ++  +++ K   V W +++
Sbjct: 1487 EPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 51/331 (15%)

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L  C +   L +   +H  + +  L  D  +T  LI +YS   ++  A  +F ++Q    
Sbjct: 34  LQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            +WN +I     NG   +AL  +  M  + I  D FT   VI A      I   K +H  
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150

Query: 467 VIRSCFEKNVFVMTALIDMYAKCG-------------------------------AVGTA 495
           +I+  F  +VFV   LID Y KCG                                +  A
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FD +  ++V +W  MI+GY  +   + A+ELF +M      PN+ T +  I AC+  
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270

Query: 556 GLVE--EGIHYFTSLKKDYGIEPVMD---HYG-AMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           G++    GIH       DY I+  ++   + G A++D+  + G + +A +  + MP    
Sbjct: 271 GILTLGRGIH-------DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKS 322

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           +  + +M+ +  +H    LG++A N   E++
Sbjct: 323 LPTWNSMITSLGVHG---LGQEALNLFSEME 350



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 17/308 (5%)

Query: 62   LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
             ++K G          L+  + K      + +VF+ + +K D  +++M+  YA+     +
Sbjct: 1276 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 1335

Query: 122  AVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            A+     M R+  V       + +L  C   G +R GK IH Q+I      ++   T ++
Sbjct: 1336 ALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSII 1395

Query: 181  NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            +MY KCG++E A K FDRM E+++ SW  +VAG+  +G A+ ALD+  +M   G + ++I
Sbjct: 1396 DMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYI 1455

Query: 241  TIVSILPAVANVGSLRIG-----KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            T VS+L A ++ G +  G        H Y +  G +        +VD++ + G +  A  
Sbjct: 1456 TFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYN 1511

Query: 296  VFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---TIMEALHACA 351
            +   MK + + V W S++ A     N +      QK+ +  ++P N     ++  L+A A
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE--LDPDNCGYYVLLSNLYADA 1569

Query: 352  D-LGDLER 358
                D+ER
Sbjct: 1570 GRWADVER 1577


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/615 (41%), Positives = 386/615 (62%), Gaps = 2/615 (0%)

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIG 258
           P R   S+N ++  F + G  E AL L   M ++     D  T+ + + + + +  L +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + V  YA + GF     V  +L+ MYA CG V  A ++F  ++ + V++WN+MIA YV+ 
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G+ +E + +F+ ML+       VT++    AC  LGD   G ++ +  ++  +    ++ 
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            +L+ MY+KC ++D+A  +F ++  + +V+W+AMI GY Q+ R  EAL  F +M+   + 
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+  TMVSV+ A A L  +   KW+H+ + R      V + TAL+D YAKCG +  A   
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F+ M  R+  TW  +I G  ++G  + A+ELF+ MLE   +P D+TF+  + ACSH  LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           EEG  +FTS+ +DYGI P ++HYG MVDLLGRAG ++EA+ FI+ MPIEP   V+ A+L 
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC +HKNVE+GE+A  ++  LDP   G ++LL+N YA+   W   A VR  M++KG++K 
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQ 737
           PGCSL+EL+  +  F++  ++HPQ   IY  +  +I+ IK  GY+P+T     DV++Y +
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEK 670

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           +  +S HSEKLAIAFGL+ S PG+TI + KNLRVC DCH+ATK IS V  REIIVRD +R
Sbjct: 671 QVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNR 730

Query: 798 FHCFKNGVCSCGDYW 812
           FH FK+G+CSC DYW
Sbjct: 731 FHHFKDGLCSCNDYW 745



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 232/477 (48%), Gaps = 36/477 (7%)

Query: 88  LSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYL 144
           LS A R+F   P P +    Y+ +++ + +    +DA+   + M  D  V+P  +     
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           +K C  + ++  G+ +       GF +D F +  +++MYA CG +  A+ +F  +  + +
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGV 237

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           ++WN ++AG+ +NG  +  +++   M E     D +T++S+  A   +G   +G+ +  Y
Sbjct: 238 IAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEY 297

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A   G     N++TALVDMYAKCG ++ AR +FD M SR+VV+W++MI+ Y +     EA
Sbjct: 298 AEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREA 357

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + IF +M    V P +VT++  L ACA LG LE G +VH  + +  L   V +  +L+  
Sbjct: 358 LAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDF 417

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC  +  A   F  +  +   +W A+I G A NGR  EAL  F  M   NI+P   T 
Sbjct: 418 YAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTF 477

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           + V+ A +           H  ++    E+     T++   Y  C               
Sbjct: 478 IGVLLACS-----------HGCLV----EEGRRHFTSMTQDYGICP-------------- 508

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
             +  +  M+D  G  GL   A +    M   P +PN + +   +SAC+    VE G
Sbjct: 509 -RIEHYGCMVDLLGRAGLIDEAYQFIRNM---PIEPNAVVWRALLSACTVHKNVEIG 561



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 4/261 (1%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T LV ++ K   L  A R+F+ +  +    +  M+ GY +     +A++
Sbjct: 300 EKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M+  +V P       +L  C  +G +  GK +H  +      L +   T +V+ YA
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYA 419

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG I++A K F+ MP R+  +W  ++ G A NG +  AL+L + M E       +T + 
Sbjct: 420 KCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG 479

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK- 301
           +L A ++   +  G+  H  +M   +     +     +VD+  + G ++ A      M  
Sbjct: 480 VLLACSHGCLVEEGRR-HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPI 538

Query: 302 SRNVVSWNSMIAAYVEGGNPE 322
             N V W ++++A     N E
Sbjct: 539 EPNAVVWRALLSACTVHKNVE 559


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/681 (37%), Positives = 421/681 (61%), Gaps = 5/681 (0%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           ++P+   +  +L+   D+  +   ++IH Q+I +G + + F    ++N Y  CG + +A 
Sbjct: 20  LSPLAQPHASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK 76

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++F   P +++VSW  +++G A+N     A+D+   M     + + +TI S+LPA AN+G
Sbjct: 77  QIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLG 136

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +RI K+VH + +R GF+  V V TALVDMY+K G +  AR +F+ M  RNVV+WN++++
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVS 196

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G  EEA+ +F  M  +G+     TIM  + A   +G L+ G  +H  + +     
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  +  +L+ +Y     VD A  +FS++  K + +W  M+ G++     + A+ +F KM 
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316

Query: 434 S-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             +N+K DS  ++ ++ + +    ++  + +HAL I++CF  N+FV +A+IDMYA CG +
Sbjct: 317 GIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNL 376

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+  F  M E+ V  WN MI G G +G G  A++LF +M      P++ TF+  + AC
Sbjct: 377 EDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+G+V EG+  F  + K   + P + HY  ++D+LGRAG+L+ A+ FI  MP +P   V
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDV 496

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +  +LGAC+IH N++LG + + ++FE++P++ GY+VLL+N+YA A  W+ +   R  +  
Sbjct: 497 YSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRS 556

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHD 731
           K ++K PG S +E+  E+++F +G   HPQ  +I   L+ LI +IK AGYVP+TN  + D
Sbjct: 557 KRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQD 616

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           V D +++++L  HSEK+AIAFGL+ + P + I I KNLR C DCH A+K++S V GR ++
Sbjct: 617 VSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLV 676

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           ++D +RFH F++GVCSC DYW
Sbjct: 677 IKDANRFHVFQDGVCSCRDYW 697



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 264/513 (51%), Gaps = 5/513 (0%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            P A +L     LK L++I   II SGL         L++ +     L+DA ++F   P 
Sbjct: 25  QPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPY 84

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  ++ G AK     +A+     M   +  P     + +L    ++G IR  K +
Sbjct: 85  KNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSV 144

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  GF  ++F  T +V+MY+K G +  A ++F+ M ER++V+WN IV+G++ +GF+
Sbjct: 145 HCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFS 204

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A+DL   M  +G   DF TI+S++PA  +VG L++G  +HG+ +R G+++  ++ TAL
Sbjct: 205 EEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTAL 264

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPT 339
           +D+Y     V+ A  VF  M  ++V +W  M+  +  G + + A++ F KML  Q ++  
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           ++ +M  L +C+  G L++G  VH L  +     ++ + +++I MY+ C  ++ A   F 
Sbjct: 325 SIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +  K +V WNAMI G   NG   +A++ F +M+   + PD  T VSV+ A +   ++  
Sbjct: 385 GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444

Query: 460 AKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGY 517
              I + +V  S    N+     +ID+  + G +  A +  + M  +     ++ ++   
Sbjct: 445 GLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGAC 504

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
             HG  K   E+  K+ E   +PND  +   +S
Sbjct: 505 RIHGNIKLGHEISQKIFE--MEPNDAGYYVLLS 535


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/752 (36%), Positives = 439/752 (58%), Gaps = 1/752 (0%)

Query: 62   LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            L+IK G   +      LV+L+ +   L  A R+F  +  +    Y++++ G  +    D 
Sbjct: 286  LVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 122  AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
            A+    +M+ D + P       LL  C  VG + +G ++H   I  G S D+     +++
Sbjct: 346  ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405

Query: 182  MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
            +Y+KC  +E A+K F      ++V WN ++  + Q      + ++  +M  EG   +  T
Sbjct: 406  LYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465

Query: 242  IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
              SIL    ++G+L +G+ +H + ++ GF   V V + L+DMYAK G++  A  +   + 
Sbjct: 466  YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 302  SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
              +VVSW +MIA YV+     EA+++F++M  +G++  N+    A+ ACA +  L +G  
Sbjct: 526  EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 362  VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
            +H        G D+S+ N+LIS+Y++C ++  A   F K+  K  +SWN+++ G AQ+G 
Sbjct: 586  IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645

Query: 422  VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
              EAL  F +M     + + FT  S I A A L+ I+  + IH++V+++ ++    V  +
Sbjct: 646  FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705

Query: 482  LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
            LI +YAK G++  A   F+ M+ER+V +WN MI GY  HG G  A+ LF +M      PN
Sbjct: 706  LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765

Query: 542  DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             +TF+  +SACSH GLV+EG+ YF S+ K + + P  +HY  +VDLLGRAG+L+ A ++I
Sbjct: 766  HVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYI 825

Query: 602  QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
            ++MPI     ++  +L AC IHKN+E+GE+AA+ L EL+P++   +VL++NIYA +  W 
Sbjct: 826  KEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWI 885

Query: 662  KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
                 R +M+ +G++K PG S +E+KN VH+FY+G   HP + +IY ++  L       G
Sbjct: 886  HRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIG 945

Query: 722  YVPDTNSIHDVEDYVQENLLSS-HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
            YV D+ S+ +  +  Q++ ++  HSEKLAIAFGLL+      I + KNLRVC DCHN  K
Sbjct: 946  YVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIK 1005

Query: 781  YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            Y+S ++ R IIVRD HRFH F  GVCSC D+W
Sbjct: 1006 YVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/573 (28%), Positives = 289/573 (50%), Gaps = 11/573 (1%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLE C    SL E  R+   I KSG   + L    LV  + ++     A +VF+   ++ 
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGEIRRGKEI 160
              ++ M+  +    S         RM  + + P  Y +  +LK C  GD+      K++
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIA-FNYVKQV 182

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +    GF         ++++Y+K G IE A K+F+ +  +D+V+W  +++G +QNG  
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A+ L   MH          + S+L A   +    +G+ +H   ++ GF S   V   L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V +Y++  ++ +A  +F  M SR+ VS+NS+I+  V+ G  + A+ +F KM    ++P  
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T+   L ACA +G L +G+ +H    +  +  D+ +  SL+ +YSKC  V+ A   F  
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            + + +V WN M++ Y Q   ++++   F +M+ + + P+ FT  S++     L  +   
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH  VI++ F+ NV+V + LIDMYAK G +  A  +   + E  V +W  MI GY  H
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
            +   A++LF +M     + ++I F  AISAC+    + +G  IH   S    +G +  +
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHA-QSYAAGFGADLSI 601

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           ++  A++ L  R GR+ EA+   +K+  +  I+
Sbjct: 602 NN--ALISLYARCGRIQEAYLAFEKIGDKNNIS 632



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 292/563 (51%), Gaps = 10/563 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ L+ K   +  A +VF  I  K    +  M+ G ++    ++A+     M   ++ P 
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y  + +L     +     G+++H  +I  GF  + +   G+V +Y++  ++  A ++F 
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  RD VS+N++++G  Q GF++ AL+L T+M  +  + D IT+ S+L A A+VG+L  
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H +A++AG  + + +  +L+D+Y+KC  VETA   F   ++ N+V WN M+ AY +
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             N  ++  IF++M  +G+ P   T    L  C  LG L  G  +H  + +     +V +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + LI MY+K  ++  A  I  +L    +VSW AMI GY Q+   +EAL  F +M  + I
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + D+    S I A A +  +R  + IHA    + F  ++ +  ALI +YA+CG +  A  
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F+ + +++  +WN ++ G    G  + A+++F +ML    + N  T+  AISA +    
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +++G  IH    LK  Y  E  + +  +++ L  ++G +++AW     M  E  +  + A
Sbjct: 681 IKQGQQIHSMV-LKTGYDSEREVSN--SLISLYAKSGSISDAWREFNDMS-ERNVISWNA 736

Query: 616 MLGACKIHKNVELGEKAANRLFE 638
           M+     H     G +A  RLFE
Sbjct: 737 MITGYSQHG---CGMEAL-RLFE 755



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 241/506 (47%), Gaps = 7/506 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY +LL+ C   G +     +H ++  +GF  +   +  +V+ Y + G    A K+FD  
Sbjct: 60  NYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN 119

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA-VANVGSLRIG 258
             R + SWN ++  F           L  RM  EG   +  T   +L A V    +    
Sbjct: 120 SNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV 179

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K VH      GFDS   V+  L+D+Y+K G +E+A+ VF+ +  +++V+W +MI+   + 
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQN 239

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+ +F  M    + PT   +   L A   +   E G  +H L+ +    ++  + 
Sbjct: 240 GLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVC 299

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N L+++YS+ +K+  A  IFS +  +  VS+N++I G  Q G  + AL  F KM+   +K
Sbjct: 300 NGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD  T+ S++ A A +  +     +H+  I++    ++ +  +L+D+Y+KC  V TA   
Sbjct: 360 PDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKF 419

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F      ++  WNVM+  YG       + E+F +M      PN  T+   +  C+  G +
Sbjct: 420 FLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL 479

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
             G    T + K  G +  +     ++D+  + G+L  A   ++++P E  +  + AM+ 
Sbjct: 480 YLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537

Query: 619 ACKIH----KNVELGEKAANRLFELD 640
               H    + ++L E+   R  + D
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFD 563



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 7/399 (1%)

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           + L+  M E G R ++   + +L      GSL     +H    ++GFD    +  +LVD 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y + G    A  VFD   +R+V SWN MI  +V   +  +   +F++ML +G+ P   T 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVS--MTNSLISMYSKCKKVDRAADIFSKL 401
              L AC   GD+               G D S  + N LI +YSK   ++ A  +F+ +
Sbjct: 163 AGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +V+W AMI G +QNG   EA+  FC M +  I P  + + SV+ A  ++ +    +
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H LVI+  F    +V   L+ +Y++   + +A  +F  MN R   ++N +I G    G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT-SLKKDYGIEPVMDH 580
               A+ELF KM     KP+ IT    +SAC+  G + +G+   + ++K     + +++ 
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE- 400

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G+++DL  +   +  A  F      E  I ++  ML A
Sbjct: 401 -GSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVA 437



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 78/164 (47%), Gaps = 2/164 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           ++K+ ++I  +++K+G   +      L+SL+ K  S+SDA R F  + ++    ++ M+ 
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFS 170
           GY++     +A+     M+   + P    +  +L  C  +G ++ G +    +  ++   
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
                   VV++  + GQ++ A +    MP   D + W T+++ 
Sbjct: 800 PKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/762 (36%), Positives = 441/762 (57%), Gaps = 13/762 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R++    +K GL D     T LV ++ K  +++D  RVF+ + ++    + ++L GY+  
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                      +M+Y+ V P  Y  + ++    + G +  G ++H  ++ +GF   +   
Sbjct: 173 GLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVF 232

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             ++++Y++ G + +A  +FD+M  RD V+WN+++AG+ +NG      ++  +M   G +
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVK 292

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
              +T  S++ + A++  L + K +   A+++GF +   V TAL+   +KC  ++ A  +
Sbjct: 293 PTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSL 352

Query: 297 FDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           F  M+  +NVVSW +MI+  ++ G  ++A+ +F +M  +GV+P + T    L        
Sbjct: 353 FSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL-------T 405

Query: 356 LERGIFV---HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           +   +FV   H  + +       S+  +L+  Y K      A  +F  ++ K L++W+AM
Sbjct: 406 VHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE-LSVIRYAKWIHALVIRSC 471
           + GYAQ G   EA   F ++  + IKP+ FT  SVI A A   +     K  HA  I+  
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR 525

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
               + V +AL+ MYAK G + +A  +F    ER + +WN MI GY  HG  K A+E+F+
Sbjct: 526 LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFD 585

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M +     + +TF+  I+AC+H+GLVE+G  YF S+  D+ I P M HY  M+DL  RA
Sbjct: 586 EMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRA 645

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G L +A   I +MP  PG TV+  +LGA ++H+NVELGE AA +L  L P++   +VLL+
Sbjct: 646 GMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLS 705

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           N+YAAA  W +   VR +M+K+ ++K PG S +E+KN+ +SF +G   HP S +IY+ L 
Sbjct: 706 NMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLS 765

Query: 712 TLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLR 770
            L   +K AGY PDT N  HD+ED  +E +LS HSE+LAIAFGL+ + P   I I KNLR
Sbjct: 766 ELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLR 825

Query: 771 VCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           VCGDCHN TK +SLV  R I+VRD +RFH FK+G+CSCGDYW
Sbjct: 826 VCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/566 (28%), Positives = 302/566 (53%), Gaps = 30/566 (5%)

Query: 91  AARVFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
           A  +F+ IP +   L  ++ +L  Y++     +A++  + + +  + P     + +  +C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
               + + G+++H Q +  G    +   T +V+MY K   + +  ++FD M ER++VSW 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++AG++ NG      +L  +M  EG   +  T+ +++ A+ N G + IG  VH   ++ 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           GF+  + V  +L+ +Y++ G +  AR VFD M+ R+ V+WNSMIA YV  G   E   IF
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD--QLKLG--TDVSMTNSLISM 384
            KM   GV+PT++T    + +CA L    R + + KL+    LK G  TD  +  +L+  
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASL----RELALVKLMQCKALKSGFTTDQIVITALMVA 339

Query: 385 YSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            SKCK++D A  +FS + +GK +VSW AMI G  QNG  ++A+N F +MR + +KP+ FT
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             +++     +    +   +HA VI++ +E++  V TAL+D Y K G    A  +F+++ 
Sbjct: 400 YSAILTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIE 455

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC-SHSGLVEEGI 562
            + +  W+ M+ GY   G  + A +LF+++++   KPN+ TF   I+AC S +   E+G 
Sbjct: 456 AKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGK 515

Query: 563 HYFTSLKKDYGIEPVMDH----YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            +       Y I+  +++      A+V +  + G ++ A +  ++   E  +  + +M+ 
Sbjct: 516 QFHA-----YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMIS 569

Query: 619 ACKIH----KNVELGEKAANRLFELD 640
               H    K +E+ ++   R  ++D
Sbjct: 570 GYSQHGQAKKALEVFDEMQKRNMDVD 595


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/661 (40%), Positives = 408/661 (61%), Gaps = 2/661 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +RRGK++H  LI  G++   F    +VNMY+KCG+++ A K+FD MP+R+LVSW  +++G
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            +QN     A+     M   G         S + A A++GS+ +GK +H  A++ G  S 
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + V + L DMY+KCG +  A  VF+ M  ++ VSW +MI  Y + G  EEA+  F+KM+D
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           + V      +   L AC  L   + G  VH  + +L   +D+ + N+L  MYSK   ++ 
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 394 AADIFS-KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           A+++F    + + +VS+  +I GY +  ++ + L+ F ++R + I+P+ FT  S+I A A
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
             + +     +HA V++  F+++ FV + L+DMY KCG +  A   FD + +     WN 
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNS 380

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           ++  +G HGLGK A++ F +M++   KPN ITF+  ++ CSH+GLVEEG+ YF S+ K Y
Sbjct: 381 LVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+ P  +HY  ++DLLGRAGRL EA +FI +MP EP    + + LGAC+IH + E+G+ A
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +L +L+P   G  VLL+NIYA    W+ +  VR  M    ++K PG S V++  + H 
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIA 751
           F +    H +   IY  L+ L+D+IKAAGYVP T+S+  D++D ++E LL  HSE++A+A
Sbjct: 561 FGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVA 620

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           F L++   G  I ++KNLRVC DCH+A K+IS VTGR+IIVRD  RFH F +G CSCGDY
Sbjct: 621 FALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDY 680

Query: 812 W 812
           W
Sbjct: 681 W 681



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 257/523 (49%), Gaps = 39/523 (7%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +++     K LRR   +  L+I +G          LV+++ K   L  A ++F+ +P 
Sbjct: 9   AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  M+ G ++ +   +A+     MR     P  + ++  ++ C  +G I  GK++
Sbjct: 69  RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   +LF  + + +MY+KCG + +A K+F+ MP +D VSW  ++ G+++ G  
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E AL    +M +E    D   + S L A   + + + G++VH   ++ GF+S + V  AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248

Query: 281 VDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            DMY+K G +E+A  VF G+ S  RNVVS+  +I  YVE    E+ + +F ++  QG+EP
Sbjct: 249 TDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
              T    + ACA+   LE+G  +H  + ++    D  +++ L+ MY KC  ++ A   F
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAF 367

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++   T ++WN+++  + Q+G   +A+ +F +M  + +KP++ T +S++   +   ++ 
Sbjct: 368 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLV- 426

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
                         E+ +    ++   Y   G V           E H   ++ +ID  G
Sbjct: 427 --------------EEGLDYFYSMDKTY---GVVP---------GEEH---YSCVIDLLG 457

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
             G  K A E  N+M   P +PN   +   + AC   G  E G
Sbjct: 458 RAGRLKEAKEFINRM---PFEPNAFGWCSFLGACRIHGDKEMG 497



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 191/362 (52%), Gaps = 4/362 (1%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D   +  ++   A    LR GK +H   + AG+     ++  LV+MY+KCG ++ A  +F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  RN+VSW +MI+   +     EA+R F  M   G  PT      A+ ACA LG +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L  +  +G+++ + ++L  MYSKC  +  A  +F ++  K  VSW AMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           + G   EAL  F KM  + +  D   + S + A   L   ++ + +H+ V++  FE ++F
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           V  AL DMY+K G + +A  +F + +E R+V ++  +IDGY      +  + +F ++   
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLN 595
             +PN+ TF   I AC++   +E+G      + K ++  +P +     +VD+ G+ G L 
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 596 EA 597
            A
Sbjct: 362 HA 363


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 286/761 (37%), Positives = 439/761 (57%), Gaps = 49/761 (6%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
            YNSL  A  +F      LDAL   + +G        D  SF +         V+   ++
Sbjct: 135 SYNSLISALCLFRQWERALDALRDMLAEGR------HDVSSFTL-------VSVLLACSH 181

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGF---SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           L    GD G  R G+E H   +  GF     + F    +++MYA+ G +++A  +F    
Sbjct: 182 LP---GDDGR-RLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTA 237

Query: 201 ER------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
                   D+V+WNT+++   Q G    A++++  M   G R D +T  S LPA + +  
Sbjct: 238 AAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEM 297

Query: 255 LRIGKAVHGYAMR-AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSM 311
           L +G+ +H   ++ A   +   V++ALVDMYA   +V +AR VFD +   SR +  WN+M
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAM 357

Query: 312 IAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           I  Y + G  EEA+ +F +M  + G  P+  T+   L ACA          +H  + +  
Sbjct: 358 ICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRG 417

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +  +  + N+L+ MY++  ++D A  IF+ +  + +VSWN +I G    G   EA     
Sbjct: 418 MAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVT 477

Query: 431 KMR----------------SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           +M+                +    P++ T+++++P  A L+     K IH   +R   E 
Sbjct: 478 EMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALES 537

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           ++ V +AL+DMYAKCG +  +RA+FD +  R+V TWNV+I  YG HGLG  AV LF++M 
Sbjct: 538 DIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMA 597

Query: 535 EG-PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
            G    PN++TF+ A++ACSHSGLV+ G+  F  +++D+G++P  D +  +VD+LGRAGR
Sbjct: 598 AGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGR 657

Query: 594 LNEAWDFIQKM-PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           L+EA+  I  M P E  ++ + ++LGAC++H+NVELGE AA RLFEL+P E  ++VLL N
Sbjct: 658 LDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCN 717

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           IY+AA MWDK   VR  M ++G+ K PGCS +EL   +H F +G + HP S  ++  ++ 
Sbjct: 718 IYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDA 777

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L + ++  GY PDT+ + HDV++  +  +L  HSEKLAIAFGLL + PG+ I + KNLRV
Sbjct: 778 LWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRV 837

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           C DCH A K++S + GR+I++RD+ RFH F++G CSCGDYW
Sbjct: 838 CNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 223/473 (47%), Gaps = 46/473 (9%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           ++  YA+CG ++ A  +F       RD VS+N++++        E ALD +  M  EGR 
Sbjct: 106 LLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRH 165

Query: 237 G-DFITIVSILPAVANV---GSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCGR 289
                T+VS+L A +++      R+G+  H +A++ GF           AL+ MYA+ G 
Sbjct: 166 DVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGL 225

Query: 290 VETARLVFDGMKSR------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           V+ A+ +F    +       +VV+WN+MI+  V+GG   EA+ +   M+  GV P  VT 
Sbjct: 226 VDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTF 285

Query: 344 MEALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL- 401
             AL AC+ L  L  G  +H  +L    L  +  + ++L+ MY+  +KV  A  +F  + 
Sbjct: 286 ASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVP 345

Query: 402 -QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRY 459
              + L  WNAMI GYAQ G   EAL  F +M ++    P   TM  V+PA A       
Sbjct: 346 EPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAG 405

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + +H  V++     N FV  AL+DMYA+ G +  AR +F M++ R V +WN +I G   
Sbjct: 406 KEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVV 465

Query: 520 HGLGKAAVELFNKML-------------EGPTK---PNDITFLCAISACSHSGLVEEG-- 561
            G    A +L  +M              EG      PN+IT +  +  C+       G  
Sbjct: 466 QGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKE 525

Query: 562 IHYFT---SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           IH +    +L+ D  +        A+VD+  + G L  +     ++P    IT
Sbjct: 526 IHGYAVRHALESDIAVG------SALVDMYAKCGCLAASRAVFDRLPRRNVIT 572



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 204/395 (51%), Gaps = 29/395 (7%)

Query: 47  LEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFE--PIPD 100
           L  C+ L+ L   R +  +++K   L       + LV ++     ++ A RVF+  P P 
Sbjct: 289 LPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPS 348

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           +   +++ M+ GYA+    ++A+    RM  +   AP     + +L  C    E   GKE
Sbjct: 349 RQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACAR-SEGFAGKE 407

Query: 160 -IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +HG ++  G + + F    +++MYA+ G+++ A ++F  +  RD+VSWNT++ G    G
Sbjct: 408 AMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQG 467

Query: 219 FAELALDLVTRMH------------EEGRR----GDFITIVSILPAVANVGSLRIGKAVH 262
            A  A  LVT M             EEG       + IT++++LP  A + +   GK +H
Sbjct: 468 HAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIH 527

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           GYA+R   +S + V +ALVDMYAKCG +  +R VFD +  RNV++WN +I AY   G  +
Sbjct: 528 GYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGD 587

Query: 323 EAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNS 380
           EA+ +F +M   G   P  VT + AL AC+  G ++RG+   H +     +     +   
Sbjct: 588 EAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHAC 647

Query: 381 LISMYSKCKKVDRAADIFSKLQ-GKTLVS-WNAMI 413
           ++ +  +  ++D A  I + ++ G+  VS W++++
Sbjct: 648 VVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 175/343 (51%), Gaps = 24/343 (6%)

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V  AL+  YA+CG ++ A  +F    +  R+ VS+NS+I+A       E A+   + ML 
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 334 QGV-EPTNVTIMEALHACADL-GDLER--GIFVHKLLDQ---LKLGTDVSMTNSLISMYS 386
           +G  + ++ T++  L AC+ L GD  R  G   H    +   L  G +    N+L+SMY+
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYA 221

Query: 387 KCKKVDRAADIFSKLQ------GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +   VD A  +F          G  +V+WN MI    Q GR  EA+     M S  ++PD
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPD 281

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALF 499
             T  S +PA + L ++   + +HA+V++      N FV +AL+DMYA    V +AR +F
Sbjct: 282 GVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVF 341

Query: 500 DMMNE--RHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHS- 555
           DM+ E  R +  WN MI GY   G+ + A+ELF++M  E    P++ T    + AC+ S 
Sbjct: 342 DMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401

Query: 556 GLV-EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           G   +E +H +   +   G   V +   A++D+  R G ++ A
Sbjct: 402 GFAGKEAMHGYVVKRGMAGNRFVQN---ALMDMYARLGEMDVA 441



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 20/272 (7%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G+      Q  L+ ++ +   +  A R+F  I  +    ++T++ G        +A
Sbjct: 413 VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472

Query: 123 VSFLIRMRYDDVA----------------PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
              +  M+    +                P       LL  C  +    RGKEIHG  + 
Sbjct: 473 FQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVR 532

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +    D+   + +V+MYAKCG +  +  +FDR+P R++++WN ++  +  +G  + A+ L
Sbjct: 533 HALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVAL 592

Query: 227 VTRMHEEGR-RGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMY 284
              M   G    + +T ++ L A ++ G +  G +  HG     G     ++   +VD+ 
Sbjct: 593 FDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVL 652

Query: 285 AKCGRVETARLVFDGMK--SRNVVSWNSMIAA 314
            + GR++ A  +   M+   + V +W+S++ A
Sbjct: 653 GRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/572 (44%), Positives = 374/572 (65%), Gaps = 2/572 (0%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +VSIL A AN G + +G+AVHG  ++A           L+DMYAKCG ++ A LVFD M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            R VV+W S+IAAY   G  +EA+R+F +M  +GV P   TI   LHACA  G LE G  
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  + +  + +++ + N+L+ MY+KC  ++ A  +F ++  K ++SWN MI GY++N  
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            NEAL+ F  M  + +KPD  T+  ++PA A L+ +   K +H  ++R+ F  +  V  A
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMY KCG    AR LFDM+  + + TW VMI GYG HG G  A+  FN+M +   +P+
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           +++F+  + ACSHSGL++EG  +F  ++ +  ++P ++HY  +VDLL R+G+L  A+ FI
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
           + MPIEP  T++GA+L  C+IH +V+L EK A  +FEL+P+  GY+VLLAN YA A  W+
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWE 419

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
           ++ K+R  + ++GL+K PGCS +E+K++VH F +G++ HPQ+K+I   L+ L  ++K  G
Sbjct: 420 EVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEG 479

Query: 722 YVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           Y P T  ++ + +   +E  L  HSEKLA+AFG+LN  P  TI + KNLRVCGDCH   K
Sbjct: 480 YFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAK 539

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +IS   GREI++RD +RFH FK+GVC C  +W
Sbjct: 540 FISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 193/379 (50%), Gaps = 3/379 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L+ C + G++  G+ +HG  +             +++MYAKCG ++ A  +FD M  R 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +V+W +++A +A+ G ++ A+ L   M  EG   D  TI ++L A A  GSL  GK VH 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           Y       S + V  AL+DMYAKCG +E A  VF  M  ++++SWN+MI  Y +   P E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F  M+ + ++P   T+   L ACA L  L+RG  VH  + +    +D  + N+L+ 
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC     A  +F  +  K L++W  MI GY  +G  N A+  F +MR   I+PD  +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA-LIDMYAKCGAVGTARALFDMM 502
            +S++ A +   ++        ++   C  K      A ++D+ A+ G +  A      M
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM 362

Query: 503 N-ERHVTTWNVMIDGYGTH 520
             E   T W  ++ G   H
Sbjct: 363 PIEPDATIWGALLSGCRIH 381



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 182/344 (52%), Gaps = 3/344 (0%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
           F   L+ ++ K   L  A  VF+ +  +    + +++  YA+    D+A+     M  + 
Sbjct: 35  FCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG 94

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V+P ++  T +L  C   G +  GK++H  +  N    ++F    +++MYAKCG +E+A 
Sbjct: 95  VSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDAN 154

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +F  MP +D++SWNT++ G+++N     AL L   M  E  + D  T+  ILPA A++ 
Sbjct: 155 SVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLA 213

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL  GK VHG+ +R GF S   V+ ALVDMY KCG    ARL+FD + ++++++W  MIA
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIA 273

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLG 372
            Y   G    A+  F +M   G+EP  V+ +  L+AC+  G L+ G  F + + D+  + 
Sbjct: 274 GYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVK 333

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILG 415
             +     ++ + ++  K+  A      +  +   + W A++ G
Sbjct: 334 PKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 5/175 (2%)

Query: 44  ALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C SL  L R   +   I+++G          LV ++ K      A  +F+ IP 
Sbjct: 203 ACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPT 262

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  M+ GY      ++A++    MR   + P   ++  +L  C   G +  G   
Sbjct: 263 KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRF 322

Query: 161 HGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
              +         L     +V++ A+ G++  AYK    MP E D   W  +++G
Sbjct: 323 FNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/752 (36%), Positives = 438/752 (58%), Gaps = 1/752 (0%)

Query: 62   LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            L+IK G   +      LV+L+ +   L  A R+F  +  +    Y++++ G  +    D 
Sbjct: 286  LVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 122  AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
            A+    +M+ D + P       LL  C  VG + +G ++H   I  G S D+     +++
Sbjct: 346  ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405

Query: 182  MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
            +Y+KC  +E A+K F      ++V WN ++  + Q      + ++  +M  EG   +  T
Sbjct: 406  LYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465

Query: 242  IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
              SIL    ++G+L +G+ +H + ++ GF   V V + L+DMYAK G++  A  +   + 
Sbjct: 466  YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525

Query: 302  SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
              +VVSW +MIA YV+     EA+++F++M  +G++  N+    A+ ACA +  L +G  
Sbjct: 526  EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585

Query: 362  VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
            +H        G D+S+ N+LIS+Y++C ++  A   F K+  K  +SWN+++ G AQ+G 
Sbjct: 586  IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645

Query: 422  VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
              EAL  F +M     + + FT  S I A A L+ I+  + IH++V+++ ++    V  +
Sbjct: 646  FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705

Query: 482  LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
            LI +YAK G++  A   F+ M+ER+V +WN MI GY  HG G  A+ LF +M      PN
Sbjct: 706  LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765

Query: 542  DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             +TF+  +SACSH GLV+EG+ YF S+ K + + P  +HY  +VDLLGRAG+L+ A ++I
Sbjct: 766  HVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYI 825

Query: 602  QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
            ++MPI     ++  +L AC IHKN+E+GE+AA+ L EL+P++   +VL++NIYA +  W 
Sbjct: 826  KEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWI 885

Query: 662  KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
                 R +M+  G++K PG S +E+KN VH+FY+G   HP + +IY ++  L       G
Sbjct: 886  HRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIG 945

Query: 722  YVPDTNSIHDVEDYVQENLLSS-HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
            YV D+ S+ +  +  Q++ ++  HSEKLAIAFGLL+      I + KNLRVC DCHN  K
Sbjct: 946  YVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIK 1005

Query: 781  YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            Y+S ++ R IIVRD HRFH F  GVCSC D+W
Sbjct: 1006 YVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/573 (28%), Positives = 289/573 (50%), Gaps = 11/573 (1%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLE C    SL E  R+   I KSG   + L    LV  + ++     A +VF+   ++ 
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGEIRRGKEI 160
              ++ M+  +    S         RM  + + P  Y +  +LK C  GD+      K++
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIA-FNYVKQV 182

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +    GF         ++++Y+K G IE A K+F+ +  +D+V+W  +++G +QNG  
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A+ L   MH          + S+L A   +    +G+ +H   ++ GF S   V   L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V +Y++  ++ +A  +F  M SR+ VS+NS+I+  V+ G  + A+ +F KM    ++P  
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T+   L ACA +G L +G+ +H    +  +  D+ +  SL+ +YSKC  V+ A   F  
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            + + +V WN M++ Y Q   ++++   F +M+ + + P+ FT  S++     L  +   
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH  VI++ F+ NV+V + LIDMYAK G +  A  +   + E  V +W  MI GY  H
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
            +   A++LF +M     + ++I F  AISAC+    + +G  IH   S    +G +  +
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHA-QSYAAGFGADLSI 601

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           ++  A++ L  R GR+ EA+   +K+  +  I+
Sbjct: 602 NN--ALISLYARCGRIQEAYLAFEKIGDKNNIS 632



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 292/563 (51%), Gaps = 10/563 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ L+ K   +  A +VF  I  K    +  M+ G ++    ++A+     M   ++ P 
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y  + +L     +     G+++H  +I  GF  + +   G+V +Y++  ++  A ++F 
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  RD VS+N++++G  Q GF++ AL+L T+M  +  + D IT+ S+L A A+VG+L  
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H +A++AG  + + +  +L+D+Y+KC  VETA   F   ++ N+V WN M+ AY +
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             N  ++  IF++M  +G+ P   T    L  C  LG L  G  +H  + +     +V +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + LI MY+K  ++  A  I  +L    +VSW AMI GY Q+   +EAL  F +M  + I
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + D+    S I A A +  +R  + IHA    + F  ++ +  ALI +YA+CG +  A  
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F+ + +++  +WN ++ G    G  + A+++F +ML    + N  T+  AISA +    
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +++G  IH    LK  Y  E  + +  +++ L  ++G +++AW     M  E  +  + A
Sbjct: 681 IKQGQQIHSMV-LKTGYDSEREVSN--SLISLYAKSGSISDAWREFNDMS-ERNVISWNA 736

Query: 616 MLGACKIHKNVELGEKAANRLFE 638
           M+     H     G +A  RLFE
Sbjct: 737 MITGYSQHG---CGMEAL-RLFE 755



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 241/506 (47%), Gaps = 7/506 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY +LL+ C   G +     +H ++  +GF  +   +  +V+ Y + G    A K+FD  
Sbjct: 60  NYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN 119

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA-VANVGSLRIG 258
             R + SWN ++  F           L  RM  EG   +  T   +L A V    +    
Sbjct: 120 SNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV 179

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K VH      GFDS   V+  L+D+Y+K G +E+A+ VF+ +  +++V+W +MI+   + 
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQN 239

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+ +F  M    + PT   +   L A   +   E G  +H L+ +    ++  + 
Sbjct: 240 GLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVC 299

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N L+++YS+ +K+  A  IFS +  +  VS+N++I G  Q G  + AL  F KM+   +K
Sbjct: 300 NGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD  T+ S++ A A +  +     +H+  I++    ++ +  +L+D+Y+KC  V TA   
Sbjct: 360 PDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKF 419

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F      ++  WNVM+  YG       + E+F +M      PN  T+   +  C+  G +
Sbjct: 420 FLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL 479

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
             G    T + K  G +  +     ++D+  + G+L  A   ++++P E  +  + AM+ 
Sbjct: 480 YLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537

Query: 619 ACKIH----KNVELGEKAANRLFELD 640
               H    + ++L E+   R  + D
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFD 563



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 7/399 (1%)

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           + L+  M E G R ++   + +L      GSL     +H    ++GFD    +  +LVD 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y + G    A  VFD   +R+V SWN MI  +V   +  +   +F++ML +G+ P   T 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVS--MTNSLISMYSKCKKVDRAADIFSKL 401
              L AC   GD+               G D S  + N LI +YSK   ++ A  +F+ +
Sbjct: 163 AGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +V+W AMI G +QNG   EA+  FC M +  I P  + + SV+ A  ++ +    +
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H LVI+  F    +V   L+ +Y++   + +A  +F  MN R   ++N +I G    G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT-SLKKDYGIEPVMDH 580
               A+ELF KM     KP+ IT    +SAC+  G + +G+   + ++K     + +++ 
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE- 400

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G+++DL  +   +  A  F      E  I ++  ML A
Sbjct: 401 -GSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVA 437



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 78/164 (47%), Gaps = 2/164 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           ++K+ ++I  +++K+G   +      L+SL+ K  S+SDA R F  + ++    ++ M+ 
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFS 170
           GY++     +A+     M+   + P    +  +L  C  +G ++ G +    +  ++   
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
                   VV++  + GQ++ A +    MP   D + W T+++ 
Sbjct: 800 PKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/779 (37%), Positives = 451/779 (57%), Gaps = 21/779 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C  L +L   R I   I++SGL  + +    L+ ++     ++ A  +FE +   L
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDL 193

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            + ++  +   A+   LD A+    RM+ + V P        L VC    +IR+ + IH 
Sbjct: 194 VS-WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA---KIRQARAIHS 249

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  +G    L   T + + YA+ G +++A ++FDR  ERD+VSWN ++  +AQ+G    
Sbjct: 250 IVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSE 309

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L  RM  EG     +T+V+   A     SLR G+ +H  A+  G D  + +  AL+D
Sbjct: 310 AALLFARMLHEGIPPSKVTLVN---ASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLD 366

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY +CG  E AR +F+G+   N VSWN+MIA   + G  + A+ +FQ+M  +G+ P   T
Sbjct: 367 MYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRAT 425

Query: 343 IMEALHACADLGDLER----GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            +  L A A   +  R    G  +H  +      ++ ++  +++ MY+ C  +D AA  F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485

Query: 399 SK--LQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +  ++ +  +VSWNA+I   +Q+G    AL +F +M    + P+  T V+V+ A A  +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMI 514
            +     +H  +  S  E NVFV TAL  MY +CG++ +AR +F+ +  ER V  +N MI
Sbjct: 546 ALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
             Y  +GL   A++LF +M +  ++P++ +F+  +SACSH GL +EG   F S+++ YGI
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
            P  DHY   VD+LGRAG L +A + I+ M ++P + V+  +LGAC+ +++V+ G  A +
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
            + ELDP +   +V+L+NI A A  WD+ A+VRT ME +GL+K  G S +E+K+ VH F 
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFV 785

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
           +G   HP+S+ IY  LE L  EI+  GYVPDT  +   V++  +E LL  HSE+LAIA G
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALG 845

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++SS   T+ + KNLRVC DCHNATK+IS +  +EI+VRD HRFH F +G CSCGDYW
Sbjct: 846 VMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 179/574 (31%), Positives = 298/574 (51%), Gaps = 18/574 (3%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L + RRI   I+  GL ++      L+ L+ K  SL D   VF  +  + +A + T++  
Sbjct: 45  LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y +      A+    RM+ + V      +  +LK C  +G++ +G+ IH  ++ +G    
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                 ++++Y  CG +  A  +F+RM ERDLVSWN  +A  AQ+G  ++AL+L  RM  
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQL 221

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG R   IT+V  L   A +   R  +A+H     +G +  + VSTAL   YA+ G ++ 
Sbjct: 222 EGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQ 278

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VFD    R+VVSWN+M+ AY + G+  EA  +F +ML +G+ P+ VT++ A   C+ 
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS- 337

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
              L  G  +H    +  L  D+ + N+L+ MY++C   + A  +F  + G   VSWN M
Sbjct: 338 --SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNA-VSWNTM 394

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA----ELSVIRYAKWIHALVI 468
           I G +Q G++  AL  F +M+ + + P   T ++++ A+A    E   +   + +H+ ++
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNERH-VTTWNVMIDGYGTHGLGKA 525
              +     + TA++ MYA CGA+  A A F    M +RH V +WN +I     HG GK 
Sbjct: 455 SCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKR 514

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+  F +M      PN IT +  + AC+ +  + EG+     L+   G+E  +    A+ 
Sbjct: 515 ALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNVFVATALA 573

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            + GR G L  A +  +K+ +E  + +F AM+ A
Sbjct: 574 SMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 257/469 (54%), Gaps = 17/469 (3%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+  GD   + +G+ IH +++  G   +L     ++ +Y KC  + +  ++F R+  RD
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
             SW TI+  + ++G A+ A+ +  RM +EG R D +T +++L A A +G L  G+++H 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           + + +G +    ++  L+ +Y  CG V +A L+F+ M+ R++VSWN+ IAA  + G+ + 
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDM 211

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +FQ+M  +GV P  +T++  L  CA    + +   +H ++ +  L   + ++ +L S
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALAS 268

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            Y++   +D+A ++F +   + +VSWNAM+  YAQ+G ++EA   F +M  + I P   T
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           +V+   A    S +R+ + IHA  +    ++++ +  AL+DMY +CG+   AR LF+ + 
Sbjct: 329 LVN---ASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP 385

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEG--PTKPNDITFLCAISACSHSG-LVE 559
              V +WN MI G    G  K A+ELF +M LEG  P +   +  L A+++       + 
Sbjct: 386 GNAV-SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMA 444

Query: 560 EGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           EG    + +    Y  EP +    A+V +    G ++EA    Q+  +E
Sbjct: 445 EGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAME 491



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 222/424 (52%), Gaps = 15/424 (3%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           P+RI      + L VC  +++ R I  ++ +SGL    +  T L S + +   L  A  V
Sbjct: 226 PARI---TLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEV 282

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+   ++    ++ ML  YA+   + +A     RM ++ + P   +   L+        +
Sbjct: 283 FDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP---SKVTLVNASTGCSSL 339

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R G+ IH   +  G   D+     +++MY +CG  EEA  +F+ +P  + VSWNT++AG 
Sbjct: 340 RFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGS 398

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN----VGSLRIGKAVHGYAMRAGF 270
           +Q G  + AL+L  RM  EG      T +++L AVA+      ++  G+ +H   +  G+
Sbjct: 399 SQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGY 458

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFD--GMKSR-NVVSWNSMIAAYVEGGNPEEAMRI 327
            S   + TA+V MYA CG ++ A   F    M+ R +VVSWN++I++  + G+ + A+  
Sbjct: 459 ASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGF 518

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F++M   GV P  +T +  L ACA    L  G+ VH  L    + ++V +  +L SMY +
Sbjct: 519 FRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGR 578

Query: 388 CKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           C  ++ A +IF K+   + +V +NAMI  Y+QNG   EAL  F +M+ +  +PD  + VS
Sbjct: 579 CGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVS 638

Query: 447 VIPA 450
           V+ A
Sbjct: 639 VLSA 642


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 272/736 (36%), Positives = 437/736 (59%), Gaps = 1/736 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++L+ K   L+ A R+F+ +P++    + T+++GYA     ++A     R++ +     
Sbjct: 90  LLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVN 149

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +LKV   +        IH      G   + F  + +++ Y+ CG +  A  +FD
Sbjct: 150 HFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFD 209

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +  +D V+W  +V+ +++N   E AL+  ++M   G + +   + S+L A   + S  +
Sbjct: 210 GIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVL 269

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +HG A++   D+  +V  AL+DMYAKCG +E AR VF+ +   +V+ W+ +I+ Y +
Sbjct: 270 GKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ 329

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +M+   V P   ++   L ACA++  L+ G  +H L+ +L   +++ +
Sbjct: 330 SYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFV 389

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ +Y+KC+ ++ + +IF  L+    VSWN +I+GY Q+G   +AL+ F +MR+ ++
Sbjct: 390 GNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHV 449

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
                T  SV+ A A  + I++   IH+L+ +S F  +  V  +LID YAKCG +  A  
Sbjct: 450 LSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALK 509

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+ + +  V +WN +I GY  HG    A+ELFN+M +  TKPND+TF+  +S C  +GL
Sbjct: 510 VFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGL 569

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G+  F S+  D+ I+P MDHY  +V LLGRAGRLN+A  FI  +P  P   V+ A+L
Sbjct: 570 VNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALL 629

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C +HKNV LG+ +A ++ E++P +   +VLL+N+YAAA + D++A +R  M   G++K
Sbjct: 630 SSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKK 689

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
             G S VE+K EVH+F  GS  HP  + I   LE L  +    GYVPD N + HDV++  
Sbjct: 690 EVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEE 749

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +  +L  HSE+LA+A+GL  + PG  I I KNLR C DCH   K IS +  REI+VRD++
Sbjct: 750 KARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDIN 809

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F  G+CSCGDYW
Sbjct: 810 RFHHFDEGICSCGDYW 825



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 272/547 (49%), Gaps = 13/547 (2%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG- 168
           L   A    LDD ++ L   + D      Y    LL+ C   G+ R G+ +H +++  G 
Sbjct: 24  LAANAALQWLDDELASLALPKLDS-----YACARLLQRCIARGDARAGRAVHARVVQRGG 78

Query: 169 -FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
              LD F    ++N+YAK G +  A ++FD MPER++VS+ T+V G+A  G  E A  L 
Sbjct: 79  VAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLF 138

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            R+  EG   +   + +IL  +  + +  +   +H  A + G D    V ++L+D Y+ C
Sbjct: 139 RRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLC 198

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G V  AR VFDG+  ++ V+W +M++ Y E   PE+A+  F KM   G +P    +   L
Sbjct: 199 GAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVL 258

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            A   L     G  +H    +    T+  +  +L+ MY+KC  ++ A  +F  +    ++
Sbjct: 259 KAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVI 318

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            W+ +I  YAQ+ +  +A   F +M   ++ P+ F++  V+ A A ++ +   + IH LV
Sbjct: 319 LWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLV 378

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I+  +E  +FV  AL+D+YAKC  +  +  +F  + + +  +WN +I GY   G  + A+
Sbjct: 379 IKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDAL 438

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD-YGIEPVMDHYGAMVD 586
            +F +M         +TF   + AC+++  ++  +   + ++K  +  + ++    +++D
Sbjct: 439 SVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV--CNSLID 496

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD--PDEG 644
              + G + +A    + + I+  +  + A++    +H       +  NR+ + D  P++ 
Sbjct: 497 TYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDV 555

Query: 645 GYHVLLA 651
            +  LL+
Sbjct: 556 TFVALLS 562



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 237/474 (50%), Gaps = 10/474 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+  +    ++S A  VF+ I  K    +  M+  Y++    +DA++   +MR     
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +  T +LK    +     GK IHG  +      +      +++MYAKCG IE+A  +
Sbjct: 249 PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTV 308

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +P  D++ W+ +++ +AQ+   E A ++  RM       +  ++  +L A ANV  L
Sbjct: 309 FEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL 368

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G+ +H   ++ G++S + V  AL+D+YAKC  +E +  +F  ++  N VSWN++I  Y
Sbjct: 369 DLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGY 428

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  E+A+ +FQ+M    V  T VT    L ACA+   ++  + +H L+++     D 
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDT 488

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NSLI  Y+KC  +  A  +F  +    +VSWNA+I GYA +GR  +AL  F +M   
Sbjct: 489 IVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKS 548

Query: 436 NIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + KP+  T V+++       ++       +++ +    + ++   T ++ +  + G +  
Sbjct: 549 DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLND 608

Query: 495 A-RALFDMMNERHVTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDIT 544
           A + + D+ +      W  ++     H    LGK + E   K+LE   +P D T
Sbjct: 609 ALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAE---KVLE--IEPQDET 657



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 172/341 (50%), Gaps = 12/341 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C ++  L   ++I  L+IK G   +      L+ ++ K  ++ ++  +F  + D  
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           +  ++T++ GY +    +DA+S    MR   V      ++ +L+ C +   I+   +IH 
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  + F+ D      +++ YAKCG I +A K+F+ + + D+VSWN I++G+A +G A  
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATD 537

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTALV 281
           AL+L  RM++   + + +T V++L    + G +  G ++ +   M       ++  T +V
Sbjct: 538 ALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIV 597

Query: 282 DMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP-- 338
            +  + GR+  A + + D   + + + W +++++ V   N        +K+L+  +EP  
Sbjct: 598 RLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLE--IEPQD 655

Query: 339 -TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            T   ++  ++A A  G L++   + K +  + +  +V ++
Sbjct: 656 ETTYVLLSNMYAAA--GILDQVALLRKSMRNIGVKKEVGLS 694


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/659 (40%), Positives = 408/659 (61%), Gaps = 38/659 (5%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            K +H  L+V G    +F  T +VN+YA  G +  +   FD++P++D+ +WN++++ +  
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 217 NGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           NG    A+    ++      R DF T   +L A    G+L  G+ +H +A + GF   V 
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 151

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V+ +L+ MY++ G    AR +FD M  R++ SWN+MI+  ++ GN  +A+ +  +M  +G
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           ++   VT+                               VS+    + MY+K   +D A 
Sbjct: 212 IKMNFVTV-------------------------------VSILPVFVDMYAKLGLLDSAH 240

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAEL 454
            +F  +  K ++SWN +I GYAQNG  +EA+  +  M   K I P+  T VS++PA A +
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 300

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             ++    IH  VI++    +VFV T LID+Y KCG +  A +LF  + +    TWN +I
Sbjct: 301 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 360

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
             +G HG  +  ++LF +ML+   KP+ +TF+  +SACSHSG VEEG   F  L ++YGI
Sbjct: 361 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGI 419

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
           +P + HYG MVDLLGRAG L  A+DFI+ MP++P  +++GA+LGAC+IH N+ELG+ A++
Sbjct: 420 KPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD 479

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           RLFE+D    GY+VLL+NIYA    W+ + KVR++  ++GL+KTPG S +E+  +V  FY
Sbjct: 480 RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFY 539

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
           +G+  HP+ K IY  L  L  ++K+ GY+PD + +  DVE+  +E++L+SHSE+LAIAFG
Sbjct: 540 TGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFG 599

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++++ P S I I KNLRVCGDCHNATK+IS +T REI+VRD +RFH FK+G+CSCGDYW
Sbjct: 600 IISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 253/521 (48%), Gaps = 47/521 (9%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L++ +G        T+LV+L+     +S +   F+ IP K    +++M+  Y       +
Sbjct: 41  LLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHE 100

Query: 122 AVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           A+  F   +   ++ P  Y +  +LK CG + +   G++IH      GF  ++F    ++
Sbjct: 101 AIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLI 157

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY++ G    A  +FD MP RD+ SWN +++G  QNG A  ALD++  M  EG + +F+
Sbjct: 158 HMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFV 217

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+VSILP                                 VDMYAK G +++A  VF+ +
Sbjct: 218 TVVSILP-------------------------------VFVDMYAKLGLLDSAHKVFEII 246

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLER 358
             ++V+SWN++I  Y + G   EA+ ++ KM+++  E  P   T +  L A A +G L++
Sbjct: 247 PVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQ 305

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G+ +H  + +  L  DV +   LI +Y KC ++  A  +F ++  ++ V+WNA+I  +  
Sbjct: 306 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 365

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           +G   + L  F +M  + +KPD  T VS++ A +    +   KW   L+     + ++  
Sbjct: 366 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 425

Query: 479 MTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG---LGKAAVELFNKML 534
              ++D+  + G +  A     DM  +   + W  ++     HG   LGK A +   ++ 
Sbjct: 426 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD---RLF 482

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           E  +K  ++ +   +S    +    EG+    SL ++ G++
Sbjct: 483 EVDSK--NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 521



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 190/371 (51%), Gaps = 35/371 (9%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L+ C +L + R+I     K G          L+ ++ ++     A  +F+ +P +    
Sbjct: 124 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 183

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ M+ G  +  +   A+  L  MR + +     N+  ++ +                  
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIK---MNFVTVVSI------------------ 222

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
                L +F     V+MYAK G ++ A+K+F+ +P +D++SWNT++ G+AQNG A  A++
Sbjct: 223 -----LPVF-----VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIE 272

Query: 226 LVTRMHEEGRR--GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
            V +M EE +    +  T VSILPA A+VG+L+ G  +HG  ++      V V+T L+D+
Sbjct: 273 -VYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 331

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCGR+  A  +F  +   + V+WN++I+ +   G+ E+ +++F +MLD+GV+P +VT 
Sbjct: 332 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 391

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  L AC+  G +E G +  +L+ +  +   +     ++ +  +   ++ A D    +  
Sbjct: 392 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPL 451

Query: 404 KTLVS-WNAMI 413
           +   S W A++
Sbjct: 452 QPDASIWGALL 462



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +AK +HAL++ +   +++F+ T L+++YA  G V  +R  FD + ++ V  WN MI  Y 
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 519 THGLGKAAVELFNK-MLEGPTKPNDITFLCAISAC 552
            +G    A+  F + +L    +P+  TF   + AC
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 128


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/757 (36%), Positives = 439/757 (57%), Gaps = 8/757 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G          L++++ +      A ++F+ +PD+    +  ++ GY +    +DA
Sbjct: 26  VLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDA 85

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR-GKEIHGQLIVNGFSLDLFAM-TGVV 180
              L  M ++   P  + +   ++ C +    RR G+++HG  I  G +    A+  G++
Sbjct: 86  CGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           NMYAKCG I+ A  +F  M ++D VSWN+++ G  QN   E A+     M + G      
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            ++S L + A++G + +G+  HG  ++ G D  V+VS  L+ +YA+  R+   + VF  M
Sbjct: 206 ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWM 265

Query: 301 KSRNVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
             R+ VSWN++I A  + G +  EA+ +F +M+  G  P  VT +  L   + L   +  
Sbjct: 266 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 325

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQ 418
             +H L+ +  +  D ++ N+L++ Y K  +++   +IFS++ + +  VSWN+MI GY  
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           N  + +A++    M  +  + D FT  +V+ A A ++ +     +HA  IR+C E +V +
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVI 445

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            +AL+DMY+KCG +  A   F++M  R++ +WN MI GY  HG G  A+ LF +M     
Sbjct: 446 GSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQ 505

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+ ITF+  +SACSH GLV+EG  YF S+ + YG+ P ++HY  MVDLLGRAG L++  
Sbjct: 506 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIE 565

Query: 599 DFIQKMPIEPGITVFGAMLGAC--KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           +FI KMPI+P I ++  +LGAC     +  ELG +AA  LF +DP     +VLL+N+YA+
Sbjct: 566 NFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYAS 625

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
              W+ +A+ R  M +  ++K  GCS V +K+ VH F +G   HP+   IY  L+ L  +
Sbjct: 626 GGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKK 685

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           I+ AGYVP    +++D+E   +E LLS HSEKLA+AF +L  + G  I I KNLRVCGDC
Sbjct: 686 IRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDC 744

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H+A KYIS V  R I++RD +RFH F++G CSC DYW
Sbjct: 745 HSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 240/451 (53%), Gaps = 5/451 (1%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            H  ++ +GF  DLF    ++N+Y + G    A K+FD MP+R+ V+W  +++G+ QNG 
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGF-DSIVNVS 277
            E A  ++  M  EG   +     S + A   ++   R G+ VHGYA+R G  D+ V V 
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             L++MYAKCG ++ AR VF  M  ++ VSWNSMI    +    E+A++ +  M   G+ 
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P+N  ++ AL +CA LG +  G   H    +L L  DVS++N+L+++Y++  ++     +
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261

Query: 398 FSKLQGKTLVSWNAMILGYAQNG-RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           FS +  +  VSWN +I   A +G  V+EA+  F +M      P+  T ++++  ++ LS 
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-VTTWNVMID 515
            + +  IHAL+++   + +  +  AL+  Y K G +     +F  M+ER    +WN MI 
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GY  + L   A++L   M++   + +  TF   +SAC+    +E G+       +   +E
Sbjct: 382 GYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC-LE 440

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             +    A+VD+  + GR++ A  F   MP+
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%)

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
           A   H  V++  F+ ++F+   LI++Y + G   +AR LFD M +R+  TW  +I GY  
Sbjct: 19  ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +G+ + A  +  +M+     PN   F  AI AC  S L
Sbjct: 79  NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESML 116


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/770 (36%), Positives = 429/770 (55%), Gaps = 98/770 (12%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           + ++L+    + +   G+ +H Q+I  G  L ++ M  ++  YAK G +  A+ +FD MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 201 ERDLVSWNTIVAGFAQNGFAEL-------------------------------ALDLVTR 229
            +   SWNT+++G+A+ G  E+                               A+ +  +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  E       T+ ++L + A   +L IG+ +H + ++ G  S V V+T+L++MYAKCG 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 290 VETARLVFD-------------------------------GMKSRNVVSWNSMIAAYVEG 318
              A++VFD                                M  R++VSWNSMI+ Y + 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 319 GNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
           G   EA+ IF KML++  ++P N T+   L ACA+L  L  G  +H  + + +  T  ++
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312

Query: 378 TNSLISMYSKCKKVD---------------------------------RAADIFSKLQGK 404
            N+LISMY+K   V+                                  A +IF+KL+ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W AMI+GY QNG  N+AL  F  M ++  +P+S+T+ +++   + L+++ + K IH
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLG 523
           A  I++       V  ALI MYAK G +  A+ +FD+ N ++ + +W  MI     HGLG
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           K A+ LF +ML    KP+ IT++  +SAC+H GLVE+G  Y+  + + + IEP + HY  
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DL GRAG L EA+ FI+ MPIEP    +G++L +CKIHKN +L + AA RL  +DP  
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            G ++ LAN+Y+A   W+  A+ R +M+ +G++K  G S + +KNEVH+F      HPQ 
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
             IY  +  + +EIK  G++PDT S+ HD+E+ V+E +L  HSEKLAIAFGLLN+   + 
Sbjct: 673 DEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTA 732

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I KNLRVC DCH+A K+IS + GREIIVRD  RFH FK+G CSC DYW
Sbjct: 733 LRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 10/297 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+  + K  ++  A  +F  + D+    +  M+ GY +    +DA+     M  +   
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE 406

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y    +L V   +  +  GK+IH   I  G S        ++ MYAK G I  A ++
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 196 FDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           FD +P  ++++VSW +++   AQ+G  + A++L  RM   G + D IT V +L A  +VG
Sbjct: 467 FD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVG 525

Query: 254 SLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSM 311
            +  G+  +         +  ++    ++D+Y + G ++ A L  + M    + ++W S+
Sbjct: 526 LVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSL 585

Query: 312 IAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +A+     N + A    +++L  D G     + +     AC   G  E      KL+
Sbjct: 586 LASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC---GKWENAAQTRKLM 639



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 64/287 (22%)

Query: 332 LDQGVEPTNVTIM-EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ++ G  PT+       L     + D   G  VH  + +  L   V + N+L++ Y+K   
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGR----------------------------- 421
           +  A  +F ++  K+  SWN +I GYA+ G                              
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120

Query: 422 --VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              + A+  F KM S+ + P  FT+ +V+ + A    +   + IH+ V++      V V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNV--------------------------- 512
           T+L++MYAKCG    A+ +FD M  ++++TWN                            
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 513 ----MIDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACSH 554
               MI GY   G    A+ +F+KML  P+ KP++ T    +SAC++
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 8/213 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE-PIP 99
           A +L V +SL  L   ++I    IK+G          L++++ K  +++ A RVF+ P  
Sbjct: 413 AAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    + +M+   A+     +A++   RM    + P    Y  +L  C  VG + +G++
Sbjct: 473 KKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRK 532

Query: 160 IHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
            +  +  V+     L     ++++Y + G ++EAY   + MP E D ++W +++A    +
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592

Query: 218 GFAELALDLVTRMH--EEGRRGDFITIVSILPA 248
             A+LA     R+   + G  G ++ + ++  A
Sbjct: 593 KNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/770 (36%), Positives = 429/770 (55%), Gaps = 98/770 (12%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           + ++L+    + +   G+ +H Q+I  G  L ++ M  ++  YAK G +  A+ +FD MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 201 ERDLVSWNTIVAGFAQNGFAEL-------------------------------ALDLVTR 229
            +   SWNT+++G+A+ G  E+                               A+ +  +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  E       T+ ++L + A   +L IG+ +H + ++ G  S V V+T+L++MYAKCG 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 290 VETARLVFD-------------------------------GMKSRNVVSWNSMIAAYVEG 318
              A++VFD                                M  R++VSWNSMI+ Y + 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 319 GNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
           G   EA+ IF KML++  ++P N T+   L ACA+L  L  G  +H  + + +  T  ++
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312

Query: 378 TNSLISMYSKCKKVD---------------------------------RAADIFSKLQGK 404
            N+LISMY+K   V+                                  A +IF+KL+ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W AMI+GY QNG  N+AL  F  M ++  +P+S+T+ +++   + L+++ + K IH
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLG 523
           A  I++       V  ALI MYAK G +  A+ +FD+ N ++ + +W  MI     HGLG
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           K A+ LF +ML    KP+ IT++  +SAC+H GLVE+G  Y+  + + + IEP + HY  
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DL GRAG L EA+ FI+ MPIEP    +G++L +CKIHKN +L + AA RL  +DP  
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            G ++ LAN+Y+A   W+  A+ R +M+ +G++K  G S + +KNEVH+F      HPQ 
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
             IY  +  + +EIK  G++PDT S+ HD+E+ V+E +L  HSEKLAIAFGLLN+   + 
Sbjct: 673 DEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTA 732

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I KNLRVC DCH+A K+IS + GREIIVRD  RFH FK+G CSC DYW
Sbjct: 733 LRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 10/297 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+  + K  ++  A  +F  + D+    +  M+ GY +    +DA+     M  +   
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE 406

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y    +L V   +  +  GK+IH   I  G S        ++ MYAK G I  A ++
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 196 FDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           FD +P  ++++VSW +++   AQ+G  + A++L  RM   G + D IT V +L A  +VG
Sbjct: 467 FD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVG 525

Query: 254 SLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSM 311
            +  G+  +         +  ++    ++D+Y + G ++ A L  + M    + ++W S+
Sbjct: 526 LVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSL 585

Query: 312 IAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +A+     N + A    +++L  D G     + +     AC   G  E      KL+
Sbjct: 586 LASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC---GKWENAAQTRKLM 639



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 64/287 (22%)

Query: 332 LDQGVEPTNVTIM-EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ++ G  PT+       L     + D   G  VH  + +  L   V + N+L++ Y+K   
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGR----------------------------- 421
           +  A  +F ++  K+  SWN +I GYA+ G                              
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120

Query: 422 --VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              + A+  F KM S+ + P  FT+ +V+ + A    +   + IH+ V++      V V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNV--------------------------- 512
           T+L++MYAKCG    A+ +FD M  ++++TWN                            
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 513 ----MIDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACSH 554
               MI GY   G    A+ +F+KML  P+ KP++ T    +SAC++
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 8/213 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE-PIP 99
           A +L V +SL  L   ++I    IK+G          L++++ K  +++ A RVF+ P  
Sbjct: 413 AAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    + +M+   A+     +A++   RM    + P    Y  +L  C  VG + +G++
Sbjct: 473 KKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRK 532

Query: 160 IHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
            +  +  V+     L     ++++Y + G ++EAY   + MP E D ++W +++A    +
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592

Query: 218 GFAELALDLVTRMH--EEGRRGDFITIVSILPA 248
             A+LA     R+   + G  G ++ + ++  A
Sbjct: 593 KNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/740 (35%), Positives = 441/740 (59%), Gaps = 12/740 (1%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K  S++DA  VF  I       +  ++  +A+     +A+ +  RM  + + P    
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +   + VC    ++++G+ +H  ++       D+   T ++ MYA+C  +E A K FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELAL----DLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            ++ LV+WN ++AG+++NG    AL    D+V++   EG + D IT  S L A + VG +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK-SPEGMKPDAITFSSALYACSVVGDI 179

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G+ +    + +G+ S   V  AL++MY+KCG +E+AR VFD +K+R+V++WN+MI+ Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G   +A+ +FQ+M     +P  VT +  L AC +L DLE+G  +H+ + +    +D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 376 SMTNSLISMYSKCKK-VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            + N L++MY+KC   ++ A  +F +L+ + +++WN +I+ Y Q G+  +AL+ F +M+ 
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +N+ P+  T+ +V+ A A L   R  K +HAL+     + +V +  +L++MY +CG++  
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
              +F  + ++ + +W+ +I  Y  HG  +  +E F ++L+     +D+T +  +SACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            G+++EG+  F S+  D+G+ P   H+  MVDLL RAGRL  A + I  MP  P    + 
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 615 AMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           ++L  CK+H + +   + A++LFEL+  DE     LL+N+YA A  WD + K R    ++
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RR 596

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
             +K PGCS +E+ + VH F +G   HP+ + I   ++ L  ++K AGYVPD   + H+V
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E +L  HSEKLAIA+GL+++ PG+ +HI KNLR C DCH A K+IS + GR+I+V
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F+NG CSC DYW
Sbjct: 717 RDSTRFHHFENGSCSCKDYW 736



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 201/371 (54%), Gaps = 5/371 (1%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           V   + + R I    + SG     + Q  L++++ K  SL  A +VF+ + ++    ++T
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ GYAK  +   A+    RM  +D  P V  +  LL  C ++ ++ +G+ IH ++  +G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 169 FSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           +  DL     ++NMY KC   +EEA ++F+R+  RD+++WN ++  + Q G A+ ALD+ 
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            +M  E    + IT+ ++L A A +G+ R GKAVH         + V +  +L++MY +C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G ++    VF  ++ +++VSW+++IAAY + G+    +  F ++L +G+   +VT++  L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 348 HACADLGDLERGI--FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-K 404
            AC+  G L+ G+  F+  + D   L  D      ++ + S+  +++ A ++   +    
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDH-GLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP 533

Query: 405 TLVSWNAMILG 415
             V+W +++ G
Sbjct: 534 DAVAWTSLLSG 544


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/776 (35%), Positives = 450/776 (57%), Gaps = 9/776 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           +L++  C  LK+    R+I+  ++KSGL  +   +  L+S+     ++  A  +F+ + +
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMR--YDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           +    ++++   YA+   ++++      MR  +D+V       + LL V G V   + G+
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV--STLLSVLGHVDHQKWGR 281

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IHG ++  GF   +     ++ MYA  G+  EA  +F +MP +DL+SWN+++A F  +G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
            +  AL L+  M   G+  +++T  S L A         G+ +HG  + +G      +  
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV MY K G +  +R V   M  R+VV+WN++I  Y E  +P++A+  FQ M  +GV  
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461

Query: 339 TNVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +T++  L AC   GDL ERG  +H  +      +D  + NSLI+MY+KC  +  + D+
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F+ L  + +++WNAM+   A +G   E L    KMRS  +  D F+    + A A+L+V+
Sbjct: 522 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 581

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              + +H L ++  FE + F+  A  DMY+KCG +G    +      R + +WN++I   
Sbjct: 582 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
           G HG  +     F++MLE   KP  +TF+  ++ACSH GLV++G+ Y+  + +D+G+EP 
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 701

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++H   ++DLLGR+GRL EA  FI KMP++P   V+ ++L +CKIH N++ G KAA  L 
Sbjct: 702 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 761

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           +L+P++   +VL +N++A    W+ +  VR  M  K ++K   CS V+LK++V SF  G 
Sbjct: 762 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 821

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLN 756
             HPQ+  IY  LE +   IK +GYV DT+ ++ D ++  +E+ L +HSE+LA+A+ L++
Sbjct: 822 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMS 881

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  GST+ I KNLR+C DCH+  K++S V GR I++RD +RFH F+ G+CSC DYW
Sbjct: 882 TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 301/603 (49%), Gaps = 36/603 (5%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            +E  ++   + KSGL       T ++ L+  Y  +S + +VFE +PD+    + +++ G
Sbjct: 75  FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y+     ++ +     MR + V     + + ++  CG + +   G++I GQ++ +G    
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           L     +++M    G ++ A  +FD+M ERD +SWN+I A +AQNG  E +  + + M  
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                +  T+ ++L  + +V   + G+ +HG  ++ GFDS+V V   L+ MYA  GR   
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A LVF  M +++++SWNS++A++V  G   +A+ +   M+  G     VT   AL AC  
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
               E+G  +H L+    L  +  + N+L+SMY K  ++  +  +  ++  + +V+WNA+
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSC 471
           I GYA++   ++AL  F  MR + +  +  T+VSV+ A L    ++   K +HA ++ + 
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           FE +  V  +LI MYAKCG + +++ LF+ ++ R++ TWN M+     HG G+  ++L +
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           KM       +  +F   +SA +   ++EEG      L    G E     + A  D+  + 
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKC 613

Query: 592 GRLNE--------------AWDFI--------------------QKMPIEPGITVFGAML 617
           G + E              +W+ +                     +M I+PG   F ++L
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673

Query: 618 GAC 620
            AC
Sbjct: 674 TAC 676



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 260/551 (47%), Gaps = 8/551 (1%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K+  +  A  +F+ +P + +  ++TM+ G  +     + + F  +M    + P  + 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 141 YTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
              L+  CG  G + R G ++HG +  +G   D++  T ++++Y   G +  + K+F+ M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P+R++VSW +++ G++  G  E  +D+   M  EG   +  ++  ++ +   +    +G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            + G  +++G +S + V  +L+ M    G V+ A  +FD M  R+ +SWNS+ AAY + G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           + EE+ RIF  M     E  + T+   L     +   + G  +H L+ ++   + V + N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ MY+   +   A  +F ++  K L+SWN+++  +  +GR  +AL   C M S     
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T  S + A          + +H LV+ S    N  +  AL+ MY K G +  +R + 
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG-LV 558
             M  R V  WN +I GY        A+  F  M       N IT +  +SAC   G L+
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 559 EEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           E G  +H +       G E       +++ +  + G L+ + D    +     I  + AM
Sbjct: 481 ERGKPLHAYIV---SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 536

Query: 617 LGACKIHKNVE 627
           L A   H + E
Sbjct: 537 LAANAHHGHGE 547


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/806 (36%), Positives = 451/806 (55%), Gaps = 50/806 (6%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YH 107
           C  + E R +   I  S      +    L+S++ K +SL DA  VFE +  +   +  ++
Sbjct: 20  CGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWN 79

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
            M+  YA+     +A+    RM    +     ++   + V G    + +G+EIH ++  +
Sbjct: 80  AMIAAYAQNGHSTEALVLYWRMNLQGLGT---DHVTFVSVLGACSSLAQGREIHNRVFYS 136

Query: 168 GFSLDLFA--MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           G  LD F      +V MYA+ G + +A +MF  +  RD  SWN ++   +Q+G    AL 
Sbjct: 137 G--LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALR 194

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M  +  + +  T ++++   +    L  G+ +H   +  GFDS + V+TAL++MY 
Sbjct: 195 IFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYG 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG    AR VFD MK R++VSWN MI  YV+ G+  EA+ ++QK+  +G + T  T + 
Sbjct: 254 KCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVS 313

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC----------------- 388
            L AC+ +  L +G  VH  + +  L ++V++  +L++MY+KC                 
Sbjct: 314 ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRD 373

Query: 389 -----------------KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
                            K   +A  +F +L  +  + WNAMI  Y QNG    A+  F +
Sbjct: 374 AVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFRE 433

Query: 432 MR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M  +  +KPD+ T ++V+ A A L  +   K +HA +  S  E NV V   LI+MYA+CG
Sbjct: 434 MTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCG 493

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAI 549
           ++  A  LF    E+ V +W  M+  +  +G    A++LF +M LEG  KP+D+T+   +
Sbjct: 494 SLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG-VKPDDVTYTSIL 552

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
             C+H G +E+G  YFT + + +G+ P  DH+ AMVDLLGR+GRL +A + ++ MP EP 
Sbjct: 553 FVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPD 612

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              +   L AC+IH  +ELGE AA R++ELDP     ++ ++NIYAA  MW+K+A VR  
Sbjct: 613 PVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKK 672

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           ME++GL+K PG S +E+  ++H F SG   HP++  I   L  L   ++AAGYVPDT ++
Sbjct: 673 MEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAV 732

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNS-SPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
            HDV +  +E +L  HSEK+AIAFGL++S   G  I + KNLRVC DCH ATK+I+ + G
Sbjct: 733 LHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAG 792

Query: 788 REIIVRDMHRFHCF-KNGVCSCGDYW 812
           R+II+RD +RFH F  +G CSCGDYW
Sbjct: 793 RDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 270/535 (50%), Gaps = 41/535 (7%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L  C+SL + R I   +  SGL         LV+++ ++ S+ DA R+F+ +  + +  
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS 175

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ ++  +++      A+     M+  D+ P    Y  ++        +  G++IH +++
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIV 234

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            NGF  DL   T ++NMY KCG   EA ++FD+M +RD+VSWN ++  + QNG    AL+
Sbjct: 235 ANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALE 294

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L  ++  EG +    T VSIL A ++V +L  G+ VH + +  G DS V V+TALV+MYA
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354

Query: 286 KCGRVETARLVFDGMK----------------------------------SRNVVSWNSM 311
           KCG +E AR VF+ MK                                  SR+ + WN+M
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAM 414

Query: 312 IAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           I  YV+ G    AM+IF++M    G++P  VT +  L ACA LG L     +H  + + +
Sbjct: 415 ITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE 474

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L ++V +TN+LI+MY++C  ++ A  +F+  + KT+VSW AM+  ++Q GR  EAL+ F 
Sbjct: 475 LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQ 534

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           +M  + +KPD  T  S++        +    ++   +              A++D+  + 
Sbjct: 535 EMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRS 594

Query: 490 GAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKP 540
           G +  A+ L + M  E     W   +     HG   LG+AA E   ++    T P
Sbjct: 595 GRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 166/621 (26%), Positives = 288/621 (46%), Gaps = 91/621 (14%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D  P    +  +L  C   G++  G+ +H ++  + F  D      +++MY KC  + +A
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61

Query: 193 YKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
             +F+ M   +R++VSWN ++A +AQNG +  AL L  RM+ +G   D +T VS+L A +
Sbjct: 62  RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
              SL  G+ +H     +G DS  +++ ALV MYA+ G V  A+ +F  +++R+  SWN+
Sbjct: 122 ---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I A+ + G+   A+RIF++M    ++P + T +  +   +    L  G  +H  +    
Sbjct: 179 VILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
             +D+ +  +LI+MY KC     A ++F K++ + +VSWN MI  Y QNG  +EAL  + 
Sbjct: 238 FDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQ 297

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           K+  +  K    T VS++ A + +  +   + +H+ ++    +  V V TAL++MYAKCG
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK-------------------------- 524
           ++  AR +F+ M  R    W+ +I  Y ++G GK                          
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITT 417

Query: 525 --------AAVELFNKMLEGP-TKPNDITFLCAISAC----------------------- 552
                   AA+++F +M      KP+ +TF+  + AC                       
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 553 ------------SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
                       +  G +EE    F + K     E  +  + AMV    + GR  EA D 
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAK-----EKTVVSWTAMVAAFSQYGRYAEALDL 532

Query: 601 IQKMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
            Q+M +E   P    + ++L  C    ++E G +    + EL       H L       A
Sbjct: 533 FQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL-------HGLAPTADHFA 585

Query: 658 SMWDKLAKVRTIMEKKGLQKT 678
           +M D L +   + + K L ++
Sbjct: 586 AMVDLLGRSGRLFDAKELLES 606


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/740 (37%), Positives = 428/740 (57%), Gaps = 7/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++  ++S+ D  +VFE +  +    + ++L GY +   L D +S   RMR + V 
Sbjct: 95  TSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVW 154

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + ++ +L +    G +  G+ +H Q I  G    +F    ++NMYAKCG +EEA  +
Sbjct: 155 PNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 214

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F RM  RD+VSWNT++AG   NG    AL L              T  +++   AN+  L
Sbjct: 215 FCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHL 274

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
            + + +H   ++ GF S  NV TAL+D Y K G+++ A  VF  M  S+NVVSW +MI  
Sbjct: 275 GLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDG 334

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            ++ G+   A  +F +M + GV P ++T    L     + +      +H  + +      
Sbjct: 335 CIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECT 390

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            ++  +L+  YSK    + A  IF  +  K +VSW+AM+  YAQ G  N A N F KM  
Sbjct: 391 PTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTM 450

Query: 435 KNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
             +KP+ FT+ S I A A  +  +   +  HA+ I+      + V +AL+ MYA+ G++ 
Sbjct: 451 HGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIE 510

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A+ +F+   +R + +WN M+ GY  HG  + A+++F +M       + +TFL  I  C+
Sbjct: 511 NAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCA 570

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLVEEG  YF  + +DYGI P MDHY  MVDL  RAG+L+E    I+ MP   G T++
Sbjct: 571 HAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIW 630

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            A+LGAC++HKNVELG+ AA +L  L+P +   +VLL+NIY+AA  W +  +VR +M+ K
Sbjct: 631 RALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 690

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K  GCS +++KN+VH F +    HP S++IY  L  +  ++K  GY PDT+ + HDV
Sbjct: 691 KVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDV 750

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  +E +L+ HSE+LA+AFGL+ + P + +HI KNLRV GD H   K +S +  REI++
Sbjct: 751 AEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVM 810

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+GVCSCGD+W
Sbjct: 811 RDCCRFHHFKSGVCSCGDFW 830



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 235/456 (51%), Gaps = 6/456 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           ++K+CG V +   GK++H   +  G    D+   T +V+MY     + +  K+F+ M +R
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++V+W +++ G+ Q G     + L  RM  EG   +  T  S+L  VA+ G + +G+ VH
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             +++ G  S V V  +L++MYAKCG VE AR+VF  M++R++VSWN+++A  V  G   
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+++F          T  T    ++ CA+L  L     +H  + +    +  ++  +L+
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300

Query: 383 SMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
             Y+K  ++D+A D+F  + G + +VSW AMI G  QNG +  A   F +MR   + P+ 
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPND 360

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T  S I  ++E S   +   IHA VI++ +E    V TAL+  Y+K  +   A ++F M
Sbjct: 361 LT-YSTILTVSEAS---FPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKM 416

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           ++++ V +W+ M+  Y   G    A   F KM     KPN+ T   AI AC+      + 
Sbjct: 417 IDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDL 476

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
              F ++   +     +    A+V +  R G +  A
Sbjct: 477 GRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 169/332 (50%), Gaps = 3/332 (0%)

Query: 217 NGFAELALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD-SIV 274
            GF   ALD     H  +GR      ++ I+    +V    +GK +H   +R G D   +
Sbjct: 32  QGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDI 91

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V T+LVDMY     V   R VF+GM  RNVV+W S++  Y++ G   + M +F +M  +
Sbjct: 92  RVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           GV P   T    L   A  G ++ G  VH    +    + V + NSL++MY+KC  V+ A
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEA 211

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F +++ + +VSWN ++ G   NGR  EAL  F   RS        T  +VI   A L
Sbjct: 212 RVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANL 271

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVM 513
             +  A+ +H+ V++  F     VMTAL+D Y K G +  A  +F +M+  ++V +W  M
Sbjct: 272 KHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM 331

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           IDG   +G    A  LF++M E    PND+T+
Sbjct: 332 IDGCIQNGDIPLAAALFSRMREDGVAPNDLTY 363



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 1/145 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+   + IK    D     + LVS++ +  S+ +A  VFE   D+    +++ML GYA+ 
Sbjct: 478 RQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQH 537

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFA 175
                A+    +M  + +      +  ++  C   G +  G++    ++ + G +  +  
Sbjct: 538 GYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDH 597

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMP 200
              +V++Y++ G+++E   + + MP
Sbjct: 598 YACMVDLYSRAGKLDETMSLIEGMP 622


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/703 (38%), Positives = 409/703 (58%), Gaps = 37/703 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK--CGQIEEAYKMFDRMPE 201
           L+K C  + ++   K+IH Q I  G   +      ++    K   G +E A  +FD MP 
Sbjct: 25  LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +   WN ++ G+++ G    A+ +   M E G   D  T   +L       +++ G+ +
Sbjct: 82  PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H + ++ GF S V V  AL+ +Y+  G V  AR VFD     +VV+WN MI+ Y      
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           +E+M++F +M    V P+++T++  L AC+ L DL  G  VH+ +  LK+     + N+L
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261

Query: 382 ISMYSKCKKVDRAADI-------------------------------FSKLQGKTLVSWN 410
           I MY+ C  +D A  I                               F K+  +  VSW 
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           AMI GY Q  R  E L+ F +M++ NIKPD FTMVS++ A A L  +   +WI A + ++
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN 381

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
             + + FV  ALIDMY  CG V  A  +F+ M  R   +W  +I G   +G G+ A+++F
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMF 441

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           ++ML+    P+++T +  + AC+HSG+V++G  +F  +   +GIEP + HYG MVDLLGR
Sbjct: 442 SQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGR 501

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AG L EA + I+ MP++P   V+G++LGAC++H++ E+ E AA ++ EL+P+ G  +VLL
Sbjct: 502 AGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLL 561

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
            NIYAA + W+KL +VR +M  +G++KTPGCSL+E+   VH F +G   HPQSK IY+ L
Sbjct: 562 CNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKL 621

Query: 711 ETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           + +  ++K AGY PDT+ +  D+ +  +E+ +  HSEKLAIAFGL++S PG TI I KNL
Sbjct: 622 DEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNL 681

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           R+C DCH   K +S V  RE+IVRD  RFH F++G CSC DYW
Sbjct: 682 RMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 281/581 (48%), Gaps = 42/581 (7%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN--SLS 89
            ++PS + + P   L++ C S+ +L++I    I +GL    +   ++++  CK+    + 
Sbjct: 12  THLPS-LPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDME 70

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
            A  VF+ +P     +++ M+KGY++    + AVS    M    V P  Y Y +LLK   
Sbjct: 71  YARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFT 130

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
               ++ G+E+H  ++  GFS ++F    ++++Y+  G++  A  +FDR  + D+V+WN 
Sbjct: 131 RDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNV 190

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +++G+ ++   + ++ L   M         IT+VS+L A + +  L +GK VH Y     
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV------------------------ 305
            + +  +  AL+DMYA CG ++TA  +FD MKSR+V                        
Sbjct: 251 IEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFD 310

Query: 306 -------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
                  VSW +MI  Y++    +E + +F++M    ++P   T++  L ACA LG LE 
Sbjct: 311 KMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALEL 370

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G ++   +D+ ++  D  + N+LI MY  C  V++A  IF+ +  +  +SW A+I G A 
Sbjct: 371 GEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAI 430

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA-LVIRSCFEKNVF 477
           NG   EAL+ F +M   +I PD  T + V+ A     ++   K   A +  +   E NV 
Sbjct: 431 NGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVA 490

Query: 478 VMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE- 535
               ++D+  + G +  A  +  +M  + +   W  ++     H   + A     ++LE 
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILEL 550

Query: 536 GPTKPNDITFLCAI-SACSHSGLVEEGIHYFTSLKKDYGIE 575
            P        LC I +AC+      E +H    L  D GI+
Sbjct: 551 EPENGAVYVLLCNIYAACNRW----EKLHEVRKLMMDRGIK 587


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/740 (35%), Positives = 440/740 (59%), Gaps = 12/740 (1%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K  S++DA  VF  I       +  ++  +A+     +A+ +  RM  + + P    
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +   + VC    ++++G+ +H  ++       D+   T ++ MYA+C  +E A K FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELAL----DLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            ++ LV+WN ++AG+++NG    AL    D+V++   EG + D IT  S L A   VG +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK-SPEGMKPDAITFSSALYACTVVGDI 179

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G+ +    + +G+ S   V  AL++MY+KCG +E+AR VFD +K+R+V++WN+MI+ Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G   +A+ +FQ+M     +P  VT +  L AC +L DLE+G  +H+ + +    +D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 376 SMTNSLISMYSKCKK-VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            + N L++MY+KC   ++ A  +F +++ + +++WN +I+ Y Q G+  +AL+ F +M+ 
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +N+ P+  T+ +V+ A A L   R  K +HAL+     + +V +  +L++MY +CG++  
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
              +F  + ++ + +W+ +I  Y  HG  +  +E F ++L+     +D+T +  +SACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            G+++EG+  F S+  D+G+ P   H+  MVDLL RAGRL  A + I  MP  P    + 
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 615 AMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           ++L  CK+H + +   + A++LFEL+  DE     LL+N+YA A  WD + K R    ++
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RR 596

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
             +K PGCS +E+ + VH F +G   HP+ + I   ++ L  ++K AGYVPD   + H+V
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E +L  HSEKLAIA+GL+++ PG+ +HI KNLR C DCH A K+IS + GR+I+V
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F+NG CSC DYW
Sbjct: 717 RDSTRFHHFENGSCSCKDYW 736



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 204/376 (54%), Gaps = 8/376 (2%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  CT + ++   R I    + SG     + Q  L++++ K  SL  A +VF+ + ++  
Sbjct: 170 LYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++TM+ GYAK  +   A+    RM  +D  P V  +  LL  C ++ ++ +G+ IH +
Sbjct: 230 IAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289

Query: 164 LIVNGFSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +  +G+  DL     ++NMY KC   +EEA ++F+RM  RD+++WN ++  + Q G A+ 
Sbjct: 290 VREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKD 349

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           ALD+  +M  E    + IT+ ++L A A +G+ R GKAVH         + V +  +L++
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMN 409

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY +CG ++    VF  ++ +++VSW+++IAAY + G+    +  F ++L +G+   +VT
Sbjct: 410 MYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVT 469

Query: 343 IMEALHACADLGDLERGI--FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           ++  L AC+  G L+ G+  F+  + D   L  D      ++ + S+  +++ A ++   
Sbjct: 470 MVSTLSACSHGGMLKEGVQTFLSMVGDH-GLAPDYRHFLCMVDLLSRAGRLEAAENLIHD 528

Query: 401 LQG-KTLVSWNAMILG 415
           +      V+W +++ G
Sbjct: 529 MPFLPDAVAWTSLLSG 544


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/672 (38%), Positives = 404/672 (60%), Gaps = 2/672 (0%)

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           +L++      E+ +GK++H  LI  G   + F     +N+Y+KCG+++   K+FD+M +R
Sbjct: 80  HLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQR 139

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++VSW +I+ GFA N   + AL    +M  EG       + S+L A  ++G+++ G  VH
Sbjct: 140 NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVH 199

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
              ++ GF   + V + L DMY+KCG +  A   F+ M  ++ V W SMI  +V+ G+ +
Sbjct: 200 CLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFK 259

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A+  + KM+   V      +   L AC+ L     G  +H  + +L    +  + N+L 
Sbjct: 260 KALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALT 319

Query: 383 SMYSKCKKVDRAADIFS-KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
            MYSK   +  A+++F       ++VS  A+I GY +  ++ +AL+ F  +R + I+P+ 
Sbjct: 320 DMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNE 379

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FT  S+I A A  + + +   +H  V++  F+++ FV + L+DMY KCG    +  LFD 
Sbjct: 380 FTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDE 439

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           +       WN ++  +  HGLG+ A+E FN M+    KPN +TF+  +  CSH+G+VE+G
Sbjct: 440 IENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG 499

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           ++YF+S++K YG+ P  +HY  ++DLLGRAG+L EA DFI  MP EP +  + + LGACK
Sbjct: 500 LNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACK 559

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH ++E  + AA++L +L+P+  G HVLL+NIYA    W+ +  +R +++   + K PG 
Sbjct: 560 IHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGY 619

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENL 740
           S V+++N+ H F      HPQ K IY  L+ L+D+IK  GYVP T S+  D++D ++E L
Sbjct: 620 SWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKL 679

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSE++A+AF LL    G  I ++KNLRVC DCH+A K+IS VT R IIVRD+ RFH 
Sbjct: 680 LHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHH 739

Query: 801 FKNGVCSCGDYW 812
           F NG CSCGDYW
Sbjct: 740 FSNGSCSCGDYW 751



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 265/565 (46%), Gaps = 43/565 (7%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A L++     KEL   +++  ++I+ G           ++L+ K   L    ++F+ +  
Sbjct: 79  AHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQ 138

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    + +++ G+A  +   +A+S   +MR +      +  + +L+ C  +G I+ G ++
Sbjct: 139 RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQV 198

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++  GF  +LF  + + +MY+KCG++ +A K F+ MP +D V W +++ GF +NG  
Sbjct: 199 HCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDF 258

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + AL    +M  +    D   + S L A + + +   GK++H   ++ GF+    +  AL
Sbjct: 259 KKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNAL 318

Query: 281 VDMYAKCGRVETARLVFD-GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            DMY+K G + +A  VF       ++VS  ++I  YVE    E+A+  F  +  +G+EP 
Sbjct: 319 TDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPN 378

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    + ACA+   LE G  +H  + +     D  ++++L+ MY KC   D +  +F 
Sbjct: 379 EFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFD 438

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           +++    ++WN ++  ++Q+G    A+  F  M  + +KP++ T V+++   +   ++  
Sbjct: 439 EIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMV-- 496

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
                        E  +   +++  +Y   G V           E H   ++ +ID  G 
Sbjct: 497 -------------EDGLNYFSSMEKIY---GVVP---------KEEH---YSCVIDLLGR 528

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            G  K A +  N M   P +PN   +   + AC   G +E        L K   +EP  +
Sbjct: 529 AGKLKEAEDFINNM---PFEPNVFGWCSFLGACKIHGDMERAKFAADKLMK---LEP--E 580

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKM 604
           + GA V LL       + W+ +Q +
Sbjct: 581 NSGAHV-LLSNIYAKEKQWEDVQSL 604



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 5/391 (1%)

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
           +  D  T+  ++   A    L  GK +H   +R G      +S   +++Y+KCG ++   
Sbjct: 71  KLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTI 130

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            +FD M  RN+VSW S+I  +      +EA+  F +M  +G   T   +   L AC  LG
Sbjct: 131 KLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG 190

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            ++ G  VH L+ +   G ++ + ++L  MYSKC ++  A   F ++  K  V W +MI 
Sbjct: 191 AIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMID 250

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           G+ +NG   +AL  + KM + ++  D   + S + A + L    + K +HA +++  FE 
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEY 310

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             F+  AL DMY+K G + +A  +F + ++   + +   +IDGY      + A+  F  +
Sbjct: 311 ETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDL 370

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAG 592
                +PN+ TF   I AC++   +E G      + K ++  +P +     +VD+ G+ G
Sbjct: 371 RRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCG 428

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
             + +     ++   P    +  ++G    H
Sbjct: 429 LFDHSIQLFDEIE-NPDEIAWNTLVGVFSQH 458


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/695 (38%), Positives = 410/695 (58%), Gaps = 43/695 (6%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCG-----QIEEAYKMFDRMPERDLVSWNTIVA 212
           K++H  ++  G   D  + T    ++  C       ++ A K+FD++P  +L +WNT++ 
Sbjct: 47  KQLHAHMLRTGLFFDPPSAT---KLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103

Query: 213 GFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            FA +      L +  +M HE  R  +  T   ++ A   V SL  G+A+HG  M+A F 
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S + +S +L+  Y+  G +++A LVF  +  +++VSWNSMI+ +V+GG+PEEA+++F++M
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
             +   P  VT++  L ACA   DLE G +    +++  +  ++ ++N+++ MY KC  +
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYA-------------------------------QNG 420
           + A  +F K++ K +VSW  MI GYA                               QNG
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343

Query: 421 RVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           +  EAL  F +++ +KN KP+  T+ S + A A+L  +    WIH  + +   + N  + 
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           T+LIDMY+KCG +  A  +F  +  R V  W+ MI G   HG G+AA++LF+KM E   K
Sbjct: 404 TSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN +TF   + ACSHSGLV+EG  +F  ++  YG+ P   HY  MVD+LGRAG L EA +
Sbjct: 464 PNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            I+KMPI P  +V+GA+LGAC+I+ NVEL E A +RL E D +  G +VLL+NIYA A  
Sbjct: 524 LIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGK 583

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD ++++R  M+  GL+K PGCS +E+   +H F  G   HP S  IY+ L+ ++  IK+
Sbjct: 584 WDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKS 643

Query: 720 AGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
            GYV D + +     E+Y++E+ L+ HSEKLAIA+GL+   P   I I KNLRVCGDCH+
Sbjct: 644 TGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHS 703

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K IS +  R+I++RD +RFH F  G CSC DYW
Sbjct: 704 VAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/638 (26%), Positives = 300/638 (47%), Gaps = 100/638 (15%)

Query: 10  SVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLC 69
           SV  +S PT  L  +    S  + +P         +L++ C + K L+++   ++++GL 
Sbjct: 10  SVPISSNPT-ILTANNEQKSNPSTVP---------ILIDKCANKKHLKQLHAHMLRTGLF 59

Query: 70  DQHLFQTKLVSL--FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
                 TKL +       +SL  A +VF+ IP      ++T+++ +A        +   I
Sbjct: 60  FDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFI 119

Query: 128 RMRYDDVA-PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           +M ++    P  Y + +++K   +V  +  G+ IHG ++   F  DLF    +++ Y+  
Sbjct: 120 QMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSL 179

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G ++ AY +F ++ E+D+VSWN++++GF Q G  E AL L  RM  E  R + +T+V +L
Sbjct: 180 GDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVL 239

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A    L  G+    Y  R G D  + +S A++DMY KCG +E AR +FD M+ +++V
Sbjct: 240 SACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIV 299

Query: 307 S-------------------------------WNSMIAAYVEGGNPEEAMRIFQKM-LDQ 334
           S                               WN++I++Y + G P+EA+ IF+++ L++
Sbjct: 300 SWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNK 359

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
             +P  VT+   L ACA LG ++ G ++H  + +  +  +  +T SLI MYSKC  +++A
Sbjct: 360 NTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKA 419

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            ++F  ++ + +  W+AMI G A +G    A++ F KM+   +KP++ T  +++ A +  
Sbjct: 420 LEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSH- 478

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT----- 509
                                              G V   R  F+ M   +        
Sbjct: 479 ----------------------------------SGLVDEGRLFFNQMRPVYGVVPGSKH 504

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           +  M+D  G  G  + AVEL  KM   P  P+   +   + AC   G VE        + 
Sbjct: 505 YACMVDILGRAGCLEEAVELIEKM---PIVPSASVWGALLGACRIYGNVE-----LAEMA 556

Query: 570 KDYGIEPVMDHYGAMV---DLLGRAGRLNEAWDFIQKM 604
               +E   +++GA V   ++  +AG+    WD + ++
Sbjct: 557 CSRLLETDSNNHGAYVLLSNIYAKAGK----WDCVSRL 590


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/626 (42%), Positives = 387/626 (61%), Gaps = 5/626 (0%)

Query: 192 AYKMFDRMPERDLVS--WNTIVAGFAQNGFAELALDLVTRMHEEGRR--GDFITIVSILP 247
           A  +F   P   L +  +N ++  F   G  E AL L   M         D  T    L 
Sbjct: 69  AVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALK 128

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           + + + +L +G+ V  YA++ G  +   V ++L+ MYA CG V  ARLVFD  +   VV 
Sbjct: 129 SCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVM 188

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN+++AAY++ G+  E + +F+ ML+ GV    VT++  + AC  +GD + G +V   +D
Sbjct: 189 WNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVD 248

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +  L  +  +  +L+ MY+KC ++ +A  +F  +Q + +V+W+AMI GY Q  +  EAL 
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F +M+   ++P+  TMVSV+ A A L  +   KW+H+ V R        + TAL+D YA
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYA 368

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG +  A   F+ M  ++  TW  +I G  T+G G+ A+ELF+ M E   +P D+TF+ 
Sbjct: 369 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG 428

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            + ACSHS LVEEG  +F S+ +DYGI+P ++HYG MVDLLGRAG ++EA+ FI+ MPIE
Sbjct: 429 VLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE 488

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   ++ A+L +C +H+NV +GE+A  ++  L+P   G +VLL+NIYA+A  W   A VR
Sbjct: 489 PNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVR 548

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+ +G++KTPGCSL+EL   V  F++  + HP+ + IY  +E +I  IK AGYVP+T 
Sbjct: 549 KEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTA 608

Query: 728 SIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            +  +VE+  +E  +S HSEKLAIAFGL+   PG+TI + KNLRVC DCH+ATK IS V 
Sbjct: 609 DVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVY 668

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            REI+VRD + FH FK+G CSC DYW
Sbjct: 669 DREIVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 238/511 (46%), Gaps = 53/511 (10%)

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL--LKVCGDVGEI 154
           P P      Y+ +++ +      +DA+   I M +   A     +T    LK C  +  +
Sbjct: 77  PRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCAL 136

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G+ +    +  G   D F ++ +++MYA CG +  A  +FD   E  +V WN IVA +
Sbjct: 137 DVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAY 196

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
            +NG     +++   M E G   D +T+VS++ A   +G  ++GK V G+    G     
Sbjct: 197 LKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP 256

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            + TAL+DMYAKCG +  AR +FDGM+SR+VV+W++MI+ Y +     EA+ +F +M   
Sbjct: 257 KLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLA 316

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            VEP +VT++  L ACA LG LE G +VH  + + +L     +  +L+  Y+KC  +D A
Sbjct: 317 RVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDA 376

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            + F  +  K   +W A+I G A NGR  EAL  F  MR   I+P   T + V+ A +  
Sbjct: 377 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSH- 435

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTT 509
                          SC                    V   R  FD M   +     V  
Sbjct: 436 ---------------SCL-------------------VEEGRRHFDSMARDYGIKPRVEH 461

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS---HSGLVEEGIHYFT 566
           +  M+D  G  GL   A +    M   P +PN + +   +S+C+   + G+ EE +    
Sbjct: 462 YGCMVDLLGRAGLVDEAYQFIRTM---PIEPNAVIWRALLSSCAVHRNVGIGEEALKQII 518

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           SL   +  + V+     + ++   AG+  +A
Sbjct: 519 SLNPSHSGDYVL-----LSNIYASAGQWKDA 544



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 5/346 (1%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           P   LH     L   +  P+   +H +A  L+ C+ +  L   R +    +K GL     
Sbjct: 99  PEDALHLFIEMLHAASACPAD--QHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRF 156

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + L+ ++     ++ A  VF+   +    +++ ++  Y K     + V     M    
Sbjct: 157 VLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVG 216

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           VA        ++  CG +G+ + GK + G +   G + +   +T +++MYAKCG+I +A 
Sbjct: 217 VAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKAR 276

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD M  RD+V+W+ +++G+ Q      AL L + M       + +T+VS+L A A +G
Sbjct: 277 RLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLG 336

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  GK VH Y  R        + TALVD YAKCG ++ A   F+ M  +N  +W ++I 
Sbjct: 337 ALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 396

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
                G   EA+ +F  M + G+EPT+VT +  L AC+    +E G
Sbjct: 397 GMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEG 442



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 6/178 (3%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +  T LV  + K   + DA   FE +P K    +  ++KG A      +A+     MR  
Sbjct: 358 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREA 417

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEE 191
            + P    +  +L  C     +  G+     +  + G    +     +V++  + G ++E
Sbjct: 418 GIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDE 477

Query: 192 AYKMFDRMP-ERDLVSWNTIVAGFAQN---GFAELALDLVTRMHEEGRRGDFITIVSI 245
           AY+    MP E + V W  +++  A +   G  E AL  +  ++     GD++ + +I
Sbjct: 478 AYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPS-HSGDYVLLSNI 534


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/760 (35%), Positives = 442/760 (58%), Gaps = 6/760 (0%)

Query: 57   RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
            R+I+  ++KSGL  +   +  L+S+     ++  A  +F+ + ++    ++++   YA+ 
Sbjct: 270  RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329

Query: 117  ASLDDAVSFLIRMR--YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
              ++++      MR  +D+V       + LL V G V   + G+ IHG ++  GF   + 
Sbjct: 330  GHIEESFRIFSLMRRFHDEVNST--TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387

Query: 175  AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
                ++ MYA  G+  EA  +F +MP +DL+SWN+++A F  +G +  AL L+  M   G
Sbjct: 388  VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447

Query: 235  RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            +  +++T  S L A         G+ +HG  + +G      +  ALV MY K G +  +R
Sbjct: 448  KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507

Query: 295  LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
             V   M  R+VV+WN++I  Y E  +P++A+  FQ M  +GV    +T++  L AC   G
Sbjct: 508  RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 567

Query: 355  DL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
            DL ERG  +H  +      +D  + NSLI+MY+KC  +  + D+F+ L  + +++WNAM+
Sbjct: 568  DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 627

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
               A +G   E L    KMRS  +  D F+    + A A+L+V+   + +H L ++  FE
Sbjct: 628  AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 687

Query: 474  KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             + F+  A  DMY+KCG +G    +      R + +WN++I   G HG  +     F++M
Sbjct: 688  HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 747

Query: 534  LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
            LE   KP  +TF+  ++ACSH GLV++G+ Y+  + +D+G+EP ++H   ++DLLGR+GR
Sbjct: 748  LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 807

Query: 594  LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
            L EA  FI KMP++P   V+ ++L +CKIH N++ G KAA  L +L+P++   +VL +N+
Sbjct: 808  LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 867

Query: 654  YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
            +A    W+ +  VR  M  K ++K   CS V+LK++V SF  G   HPQ+  IY  LE +
Sbjct: 868  FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 927

Query: 714  IDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
               IK +GYV DT+ ++ D ++  +E+ L +HSE+LA+A+ L+++  GST+ I KNLR+C
Sbjct: 928  KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRIC 987

Query: 773  GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             DCH+  K++S V GR I++RD +RFH F+ G+CSC DYW
Sbjct: 988  SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 276/545 (50%), Gaps = 27/545 (4%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            +E  ++   + KSGL       T ++ L+  Y  +S + +VFE +PD+    + +++ G
Sbjct: 190 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 249

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y+     ++ +       Y D +                     G++I GQ++ +G    
Sbjct: 250 YSDKGEPEEVIDI-----YKDES--------------------LGRQIIGQVVKSGLESK 284

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           L     +++M    G ++ A  +FD+M ERD +SWN+I A +AQNG  E +  + + M  
Sbjct: 285 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 344

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                +  T+ ++L  + +V   + G+ +HG  ++ GFDS+V V   L+ MYA  GR   
Sbjct: 345 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 404

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A LVF  M +++++SWNS++A++V  G   +A+ +   M+  G     VT   AL AC  
Sbjct: 405 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 464

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
               E+G  +H L+    L  +  + N+L+SMY K  ++  +  +  ++  + +V+WNA+
Sbjct: 465 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 524

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSC 471
           I GYA++   ++AL  F  MR + +  +  T+VSV+ A L    ++   K +HA ++ + 
Sbjct: 525 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 584

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           FE +  V  +LI MYAKCG + +++ LF+ ++ R++ TWN M+     HG G+  ++L +
Sbjct: 585 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 644

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           KM       +  +F   +SA +   ++EEG      L    G E     + A  D+  + 
Sbjct: 645 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKC 703

Query: 592 GRLNE 596
           G + E
Sbjct: 704 GEIGE 708



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 254/559 (45%), Gaps = 33/559 (5%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           L    L++++ K+  +  A  +F+ +P + +  ++TM+ G  +     + + F  +M   
Sbjct: 108 LHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL 167

Query: 133 DVAPVVYNYTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
            + P  +    L+  CG  G + R G ++HG +  +G   D++  T ++++Y   G +  
Sbjct: 168 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 227

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           + K+F+ MP+R++VSW +++ G++  G  E  +D+                         
Sbjct: 228 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK----------------------- 264

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
                +G+ + G  +++G +S + V  +L+ M    G V+ A  +FD M  R+ +SWNS+
Sbjct: 265 --DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 322

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
            AAY + G+ EE+ RIF  M     E  + T+   L     +   + G  +H L+ ++  
Sbjct: 323 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 382

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            + V + N+L+ MY+   +   A  +F ++  K L+SWN+++  +  +GR  +AL   C 
Sbjct: 383 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 442

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M S     +  T  S + A          + +H LV+ S    N  +  AL+ MY K G 
Sbjct: 443 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 502

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           +  +R +   M  R V  WN +I GY        A+  F  M       N IT +  +SA
Sbjct: 503 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 562

Query: 552 CSHSG-LVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           C   G L+E G  +H +       G E       +++ +  + G L+ + D    +    
Sbjct: 563 CLLPGDLLERGKPLHAYIV---SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NR 618

Query: 609 GITVFGAMLGACKIHKNVE 627
            I  + AML A   H + E
Sbjct: 619 NIITWNAMLAANAHHGHGE 637



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 226/466 (48%), Gaps = 32/466 (6%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G+ +H   +     L +     ++NMY K G+++ A  +FD MP R+ VSWNT+++G  +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL-RIGKAVHGYAMRAGFDSIVN 275
            G     ++   +M + G +     I S++ A    GS+ R G  VHG+  ++G  S V 
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           VSTA++ +Y   G V  +R VF+ M  RNVVSW S++  Y + G PEE + I++      
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD----- 265

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
                            LG    G  V   L+     + +++ NSLISM      VD A 
Sbjct: 266 ---------------ESLGRQIIGQVVKSGLE-----SKLAVENSLISMLGSMGNVDYAN 305

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF ++  +  +SWN++   YAQNG + E+   F  MR  + + +S T+ +++  L  + 
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             ++ + IH LV++  F+  V V   L+ MYA  G    A  +F  M  + + +WN ++ 
Sbjct: 366 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 425

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYG 573
            +   G    A+ L   M+      N +TF  A++AC      E+G  +H    +   + 
Sbjct: 426 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 485

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            + + +   A+V + G+ G ++E+   + +MP    +  + A++G 
Sbjct: 486 NQIIGN---ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 527



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 25/275 (9%)

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW----------NSMIAAYV 316
           + GF S++   T +     + G++ T   VF G +  +   W          N  IA + 
Sbjct: 3   KVGFKSLIFPGTTVEHRRIRAGQLATQSPVFSG-RRFSFAQWICLPPVQDATNLDIAMFE 61

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G  +          DQ +  + +TI               G  VH L  +  +   V 
Sbjct: 62  KSGRKKNHWNPEISCFDQ-IGFSQITIETT------------GRAVHALCVKGLVRLSVL 108

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
            TN+LI+MY+K  +V  A  +F  +  +  VSWN M+ G  + G   E + +F KM    
Sbjct: 109 HTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG 168

Query: 437 IKPDSFTMVSVIPALAEL-SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           IKP SF + S++ A     S+ R    +H  V +S    +V+V TA++ +Y   G V  +
Sbjct: 169 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 228

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
           R +F+ M +R+V +W  ++ GY   G  +  ++++
Sbjct: 229 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 263



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 2/170 (1%)

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
             +++++    + +HAL ++     +V     LI+MY K G V  AR LFD+M  R+  +
Sbjct: 81  GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS 140

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG-LVEEGIHYFTSL 568
           WN M+ G    GL    +E F KM +   KP+       ++AC  SG +  EG+     +
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            K  G+   +    A++ L G  G ++ +    ++MP    ++    M+G
Sbjct: 201 AKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 249


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 288/813 (35%), Positives = 464/813 (57%), Gaps = 40/813 (4%)

Query: 37  RIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY---NSLSDAAR 93
           R    PS+L  + C ++ EL+     + K GL D     TKLV+  C+     SLS A  
Sbjct: 30  RTKATPSSL--KNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKE 87

Query: 94  VFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           VFE         +Y+++++GYA      +A+   IRM    ++P  Y + + L VC    
Sbjct: 88  VFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSR 147

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +   G +IHG +I   ++ DLF    +V+ YA+CG+++ A K+FD M ER++VSW +++ 
Sbjct: 148 DKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMIC 207

Query: 213 GFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           G+A+  FA+ A+DL  RM  +E    + +T+V ++ A A +  L  G+ V+ +   +G +
Sbjct: 208 GYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIE 267

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
               + +ALVDMY KC  ++ A+ +FD   + N+   N+M + YV  G  +EA+ +   M
Sbjct: 268 VNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLM 327

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
           +D G+ P  ++++ A+ +C+ L ++  G   H  + +    +  ++ N+LI MY KC + 
Sbjct: 328 MDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 387

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI-------------- 437
           D A  IF ++  KT+V+WN+++ GY +NG V+ A   F  M  KNI              
Sbjct: 388 DTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQEN 447

Query: 438 ------------------KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
                               D  TM+S+  A   L  +  AKWI+  + ++  + +V + 
Sbjct: 448 MYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLG 507

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           T L+DM+++CG   +A ++F+ +  R V+ W   I      G  + A+ELFN+M+E   K
Sbjct: 508 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLK 567

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ + F+ A++AC H GLV++G   F S++K +G+ P   HYG MVDLLGRAG L EA  
Sbjct: 568 PDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQ 627

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            I+ MP EP   ++ ++L AC++  NVE+   AA ++  L P+  G +VLL+N+YA+A  
Sbjct: 628 LIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGR 687

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W+ +AKVR  M++KGL+K PG S+++++ + H F SG   HP+ ++I   L+ L      
Sbjct: 688 WNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASD 747

Query: 720 AGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            G+VPD +N + DV++  +  +LS HSEKLA+AFGL++S+ G+TI I KNLRVC  CH+ 
Sbjct: 748 LGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSF 807

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            K+ S V  REII+RD +RFH  + G CSC D+
Sbjct: 808 AKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/806 (36%), Positives = 450/806 (55%), Gaps = 50/806 (6%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YH 107
           C  + E R +   I  S      +    L+S++ K +SL DA  VFE +  +   +  ++
Sbjct: 20  CGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWN 79

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
            M+  YA+     +A+    RM    +     ++   + V G    + +G+EIH ++  +
Sbjct: 80  AMIAAYAQNGHSTEALVLYWRMNLQGLGT---DHVTFVSVLGACSSLAQGREIHNRVFYS 136

Query: 168 GFSLDLFA--MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           G  LD F      +V MYA+ G + +A +MF  +  RD  SWN ++   +Q+G    AL 
Sbjct: 137 G--LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALR 194

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M  +  + +  T ++++   +    L  G+ +H   +  GFD+ + V+TAL++MY 
Sbjct: 195 IFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYG 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG    AR VFD MK R++VSWN MI  YV  G+  EA+ ++QK+  +G + T  T + 
Sbjct: 254 KCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVS 313

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC----------------- 388
            L AC+ +  L +G  VH  + +  L ++V++  +L++MY+KC                 
Sbjct: 314 ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRD 373

Query: 389 -----------------KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
                            K   +A  +F +L  +  +SWNAMI  Y QNG    A+  F +
Sbjct: 374 AVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFRE 433

Query: 432 MR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M  +  +KPD+ T ++V+ A A L  +   K +HA +  S  E NV V   LI+MYA+CG
Sbjct: 434 MTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCG 493

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAI 549
           ++  A  LF    E+ V +W  M+  +  +G    A++LF +M LEG  KP+D+T+   +
Sbjct: 494 SLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG-VKPDDVTYTSIL 552

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
             C+H G +E+G  YFT + + + + P  DH+ AMVDLLGR+GRL +A + ++ MP EP 
Sbjct: 553 FVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPD 612

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              +   L AC+IH  +ELGE AA R++ELDP     ++ ++NIYAA  MW+K+A VR  
Sbjct: 613 PVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKK 672

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           ME++GL+K PG S +E+  ++H F SG   HP++  I   L  L   ++AAGYVPDT ++
Sbjct: 673 MEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAV 732

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNS-SPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
            HDV +  +E +L  HSEK+AIAFGL++S   G  I + KNLRVC DCH ATK+I+ + G
Sbjct: 733 LHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAG 792

Query: 788 REIIVRDMHRFHCF-KNGVCSCGDYW 812
           R+IIVRD +RFH F  +G CSCGDYW
Sbjct: 793 RDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 270/535 (50%), Gaps = 41/535 (7%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L  C+SL + R I   +  SGL         LV+++ ++ S+ DA R+F+ +  + +  
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS 175

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ ++  +++      A+     M+  DV P    Y  ++        +  G++IH +++
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIV 234

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            NGF  DL   T ++NMY KCG   EA ++FD+M +RD+VSWN ++  +  NG    AL+
Sbjct: 235 ANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALE 294

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L  ++  EG +    T VSIL A ++V +L  G+ VH + +  G DS V V+TALV+MYA
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354

Query: 286 KCGRVETARLVFDGMK----------------------------------SRNVVSWNSM 311
           KCG +E AR VF+ MK                                  SR+ +SWN+M
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAM 414

Query: 312 IAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           I  YV+ G    AM+IF++M    G++P  VT +  L ACA LG L     +H  + + +
Sbjct: 415 ITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE 474

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L ++V +TN+LI+MY++C  ++ A  +F+  + KT+VSW AM+  ++Q GR  EAL+ F 
Sbjct: 475 LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQ 534

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           +M  + +KPD  T  S++        +    ++   +              A++D+  + 
Sbjct: 535 EMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRS 594

Query: 490 GAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKP 540
           G +  A+ L + M  E     W   +     HG   LG+AA E   ++    T P
Sbjct: 595 GRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 287/621 (46%), Gaps = 91/621 (14%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D  P    +  +L  C   G++  G+ +H ++  + F  D      +++MY KC  + +A
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61

Query: 193 YKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
             +F+ M   +R++VSWN ++A +AQNG +  AL L  RM+ +G   D +T VS+L A +
Sbjct: 62  RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
              SL  G+ +H     +G DS  +++ ALV MYA+ G V  A+ +F  +++R+  SWN+
Sbjct: 122 ---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I A+ + G+   A+RIF++M    V+P + T +  +   +    L  G  +H  +    
Sbjct: 179 VILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
             TD+ +  +LI+MY KC     A ++F K++ + +VSWN MI  Y  NG  +EAL  + 
Sbjct: 238 FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQ 297

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           K+  +  K    T VS++ A + +  +   + +H+ ++    +  V V TAL++MYAKCG
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK-------------------------- 524
           ++  AR +F+ M  R    W+ +I  Y ++G GK                          
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417

Query: 525 --------AAVELFNKMLEGP-TKPNDITFLCAISAC----------------------- 552
                   AA+++F +M      KP+ +TF+  + AC                       
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 553 ------------SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
                       +  G +EE    F + K     E  +  + AMV    + GR  EA D 
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAK-----EKTVVSWTAMVAAFSQYGRYAEALDL 532

Query: 601 IQKMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
            Q+M +E   P    + ++L  C    ++E G +    + EL       H L       A
Sbjct: 533 FQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL-------HALAPTADHFA 585

Query: 658 SMWDKLAKVRTIMEKKGLQKT 678
           +M D L +   + + K L ++
Sbjct: 586 AMVDLLGRSGRLFDAKELLES 606


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/655 (40%), Positives = 404/655 (61%), Gaps = 2/655 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +IH  +I+ G      +   ++  YA+ G IE A ++FD+ P+  + +WN ++  +++ G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
               AL L  RM  EG R D  T   +L A      LR G+     A+  G+   V V  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           A++++YAKCG+++ A  VFD M  R++V W +MI    + G   EA+ I+++M  + VE 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             V ++  + AC  LG  + G+ +H  + +  +  DV +  SL+ MY+K   ++ A+ +F
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  K ++SW+A+I G+AQNG    AL     M+S   KPDS ++VSV+ A +++  ++
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             K +H  ++R     +    TA+IDMY+KCG++  AR +FD ++ R   +WN +I  YG
Sbjct: 325 LGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG G+ A+ LF +M E   KP+  TF   +SA SHSGLVE+G ++F+ +  +Y I+P  
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  MVDLL RAGR+ EA + I+ M  EPGI ++ A+L  C  H    +GE AA ++ E
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           L+PD+ G + L++N +A A  WD++A+VR IM+K G++K PG S++E+  ++H+F     
Sbjct: 504 LNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDK 563

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            H Q + I   L  L  E+KA GYVP T  + H++E+ V+E +L +HSE+LAIAFGLLN+
Sbjct: 564 SHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNT 623

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            PG+ + I KNLRVCGDCH ATK+IS +  REI+VRD+ RFH FK+GVCSCGDYW
Sbjct: 624 GPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 267/489 (54%), Gaps = 10/489 (2%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           +I  L+I +G+        KL+  + +   +  A +VF+  P      ++ M+  Y++  
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           ++ +A+S   RM  + V P    YT +LK C    ++R G+E   Q +  G+  D+F   
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            V+N+YAKCG+++EA ++FD+M  RDLV W T++ G AQNG A  A+D+  +MH++   G
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D + ++ ++ A   +G  ++G ++HGY +R      V V T+LVDMYAK G +E A  VF
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
             M  +NV+SW+++I+ + + G    A+++   M   G +P +V+++  L AC+ +G L+
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  VH  + + +L  D   + ++I MYSKC  +  A  +F ++  +  +SWNA+I  Y 
Sbjct: 325 LGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNV 476
            +G   EAL+ F +MR  N+KPD  T  S++ A +   ++   + W   +V     + + 
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 477 FVMTALIDMYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHG---LGKAAVELFNK 532
                ++D+ ++ G V  A+ L + M+ E  +  W  ++ G   HG   +G+ A +   K
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAK---K 500

Query: 533 MLE-GPTKP 540
           +LE  P  P
Sbjct: 501 VLELNPDDP 509


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/659 (40%), Positives = 396/659 (60%), Gaps = 7/659 (1%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           K+IH Q++  G   D F  + +V   +  + G ++ A  +F ++P     + N+I+ G  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                + AL     M  +G   D  T  S+  +  N      GK +H ++ + GF S   
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTY 121

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQ 334
               L++MY+ CG + +AR VFD M+ + VVSW +MI  + +   P EA+R+F +M+  +
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            V+P  VT++  L ACA   DL     +H+ +D+   G  V +   L+ +Y KC  V  A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            D+F K Q K L SWN MI G+ ++    EAL  F +M++K IK D  TM S++ A   L
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +   KW+HA + +   + +V + TAL+DMYAKCG++ TA  +F  M E+ V TW  +I
Sbjct: 302 GALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALI 361

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            G    G  + A++ F++M     KP+ ITF+  ++ACSH+G V+EGI +F S+   YGI
Sbjct: 362 LGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGI 421

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
           +P ++HYG +VD+LGRAGR+ EA + I+ MP+ P   V G +LGAC+IH N+E  E+AA 
Sbjct: 422 QPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAK 481

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           +L E+DP   G +VLL+NIY ++  W++  + R +M ++G++K PGCS +E+   VH F 
Sbjct: 482 QLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFV 541

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
            G + H QS  I   LE +I ++K AGYVPD + +  D+ +  +E  LS HSEKLAIAFG
Sbjct: 542 KGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFG 601

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LL++S G+ I + KNLR+C DCH+ATK IS +  REIIVRD +RFH FK+G CSC  +W
Sbjct: 602 LLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 191/373 (51%), Gaps = 5/373 (1%)

Query: 31  RAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           +  IP R Y  PS  L + C +  E ++I     K G       Q  L++++     L  
Sbjct: 82  QGLIPDR-YTFPS--LFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVS 138

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCG 149
           A +VF+ + DK    + TM+  +A++   ++AV    RM + ++V P       +L  C 
Sbjct: 139 ARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA 198

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
              ++   K IH  +  +GF   +   T ++++Y KCG ++ A  +FD+  E++L SWN 
Sbjct: 199 RARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNI 258

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           ++ G  ++   E AL L   M  +G +GD +T+ S+L A  ++G+L +GK +H Y  +  
Sbjct: 259 MINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR 318

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            D  V + TALVDMYAKCG +ETA  VF  M  ++V++W ++I      G  E A++ F 
Sbjct: 319 IDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFD 378

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           +M  +GV+P  +T +  L AC+  G ++ GI   + + D   +   +     L+ +  + 
Sbjct: 379 EMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRA 438

Query: 389 KKVDRAADIFSKL 401
            ++  A ++   +
Sbjct: 439 GRIAEAEELIKSM 451


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/664 (38%), Positives = 400/664 (60%), Gaps = 33/664 (4%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           +Y+    + ++ ++F+ +     ++W +++  +  +G    +L     M   G   D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK-------------CG 288
             S+L + A +  L +G+++HGY +R G D  +    AL++MY+K              G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 289 RV-------------------ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            V                   ++ R +F+ M  +++VSWN++IA     G  EE +R+ +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M    ++P + T+   L   A+  D+ RG  +H    +  L  D+ + +SLI MY+KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +V  +  +F+ L  +  +SWN++I G  QNG  +E L +F +M    IKP S++  S++P
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A L+ +   K +H  + R+ F++N+F+ ++L+DMYAKCG + TA+ +FD M  R + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           W  MI G   HG    A+ELF +M     KPN + F+  ++ACSH GLV+E   YF S+ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           +D+GI P ++HY A+ DLLGRAGRL EA+DFI  M I P  +++  +L AC++H N+++ 
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           EK ANR+ E+DP+  G ++LLANIY+AA  W + AK R  M + G++KTP CS +E+KN+
Sbjct: 529 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 588

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKL 748
           V++F +G   HP  ++I   +E L++ ++  GYVPDT+ + HDVE+  ++ L+ SHSE+L
Sbjct: 589 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERL 648

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           AI FG++N+  G TI + KNLRVC DCH ATK+IS + GREI+VRD  RFH FKNG CSC
Sbjct: 649 AIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSC 708

Query: 809 GDYW 812
           GDYW
Sbjct: 709 GDYW 712



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 248/499 (49%), Gaps = 42/499 (8%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++   N L D+ R+F  I       + ++++ Y        ++   I M    + P    
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA-------- 192
           +  +LK C  + ++  G+ +HG +I  G   DL+    ++NMY+K   +EE+        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 193 ------------------------YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
                                    K+F+ MPE+DLVSWNTI+AG A+NG  E  L ++ 
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M     + D  T+ S+LP +A    +  GK +HG ++R G D+ + V+++L+DMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           RV  +  VF  +  R+ +SWNS+IA  V+ G  +E +R F++ML   ++P + +    + 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACA L  L  G  +H  + +     ++ + +SL+ MY+KC  +  A  IF +++ + +VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           W AMI+G A +G+  +A+  F +M ++ IKP+    ++V+ A +   ++  A K+ +++ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV----TTWNVMIDGYGTHGLG 523
                   V    A+ D+  + G +  A   +D +   H+    + W  ++     H   
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEA---YDFICGMHIGPTGSIWATLLSACRVHXNI 525

Query: 524 KAAVELFNKMLEGPTKPND 542
             A ++ N++LE    PN+
Sbjct: 526 DMAEKVANRILE--VDPNN 542



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 144/280 (51%), Gaps = 4/280 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I+ GL       + L+ ++ K   ++D+ RVF  + ++    +++++ G  +    D+ +
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  +M    + P  Y+++ ++  C  +  +  GK++HG +  NGF  ++F  + +V+MY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A ++FDRM  RD+VSW  ++ G A +G A  A++L  +M  EG + + +  +
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFM 445

Query: 244 SILPAVANVGSL-RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           ++L A ++ G +    K  +      G    V    A+ D+  + GR+E A     GM  
Sbjct: 446 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 505

Query: 303 RNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
               S W ++++A     N + A ++  ++L+  V+P N 
Sbjct: 506 GPTGSIWATLLSACRVHXNIDMAEKVANRILE--VDPNNT 543


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/567 (43%), Positives = 361/567 (63%), Gaps = 1/567 (0%)

Query: 247  PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            P    +      K  H      G      + T    MY    R++ A +VF+ + +    
Sbjct: 725  PGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSF 784

Query: 307  SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
             WN MI  +   G    ++ ++ KM+++G++P       AL +CA L DL+RG  +H+ L
Sbjct: 785  LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844

Query: 367  DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
                   D+ +  +L+ MY+KC  ++ A  +F K+  + LVSW +MI GYA NG  +E L
Sbjct: 845  VCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETL 904

Query: 427  NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             +F  MRS  + P+  +++SV+ A   L  +R  +W H+ VI++ FE ++ V TA++DMY
Sbjct: 905  GFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMY 964

Query: 487  AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            +KCG++  AR LFD    + +  W+ MI  YG HG G+ A++LF++M++   +P+ +TF 
Sbjct: 965  SKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFT 1024

Query: 547  CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
            C +SACSHSGL+EEG  YF  + +++ I   + +Y  MVDLLGRAG+L+EA D I+ MP+
Sbjct: 1025 CVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 1084

Query: 607  EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
            EP  +++G++LGAC+IH N++L EK A+ LF LDP   GYHVLL+NIYAA S W+++ KV
Sbjct: 1085 EPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKV 1144

Query: 667  RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
            R +M ++G  K  G SLVE  N+VH F  G   HPQ +++Y  LE L   +K  GYVP T
Sbjct: 1145 RKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLT 1204

Query: 727  NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            + + HD+E+  +E  LS HSE+LAIAFGL+N+SPG+T+ I KNLR+CGDCHNA K IS +
Sbjct: 1205 DFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKI 1264

Query: 786  TGREIIVRDMHRFHCFKNGVCSCGDYW 812
              R I+VRDMHRFH F++GVCSCGDYW
Sbjct: 1265 VNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/723 (37%), Positives = 428/723 (59%), Gaps = 12/723 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L + C + + + ++   + K+G+     F TKL SL+ K  SL  A +VF+  P     L
Sbjct: 10  LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL 69

Query: 106 YHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +++ L+ Y +    ++ +  F + +     AP  +     LK C  +  +  GK IHG  
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 165 IVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
             N     D+F  + +V +Y+KCGQ+ EA K+F+     D V W ++V G+ QN   E A
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 224 LDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           L L ++M   +    D +T+VS++ A A + +++ G  VHG  +R  FD  + +  +L++
Sbjct: 190 LALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLN 249

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YAK G  + A  +F  M  ++V+SW++MIA Y       EA+ +F +M+++  EP +VT
Sbjct: 250 LYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVT 309

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++ AL ACA   +LE G  +HK+        D S++ +LI MY KC   D A D+F +L 
Sbjct: 310 VVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP 369

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K +VSW A++ GYAQNG   +++  F  M S  I+PD+  +V ++ A +EL + + A  
Sbjct: 370 KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALC 429

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  V+RS F  NVFV  +LI++Y+KCG++G A  LF  M  R V  W+ MI  YG HG 
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489

Query: 523 GKAAVELFNKMLEGPT-KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           G  A+E+F++M++  T +PN++TFL  +SACSH+GLVEEG+  F  +  DY + P  +H+
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHF 549

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDLLGR G+L +A D I +MPI  G  V+GA+LGAC+IH N+E+GE AA  LF LDP
Sbjct: 550 GIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDP 609

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              GY++LL+NIYA    WD +A++RT ++++GL+K  G S+VE++  VHSF +    HP
Sbjct: 610 SHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHP 669

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQ--ENLLSSHSEKLAIAFGLLNSS 758
            S++IY  L  L  ++    Y+PD +  +HD    +Q  + + ++ S+     +  + S+
Sbjct: 670 DSQKIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESK-----YKTIGSA 724

Query: 759 PGS 761
           PG+
Sbjct: 725 PGT 727



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 194/347 (55%), Gaps = 1/347 (0%)

Query: 56   LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAK 115
            L++    I   GL       TK   ++  +N +  A+ VFE IP+    L++ M++G+A 
Sbjct: 736  LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 116  FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
                  ++    +M    + P  + + + LK C  + +++RGK IH  L+  G S DLF 
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 176  MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
               +V+MYAKCG IE A  +FD+M  RDLVSW ++++G+A NG+    L     M   G 
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 236  RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
              + ++I+S+L A  N+G+LR G+  H Y ++ GF+  + V+TA++DMY+KCG ++ AR 
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 296  VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
            +FD    +++V W++MIA+Y   G+  +A+ +F +M+  GV P++VT    L AC+  G 
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 356  LERGIFVHKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            LE G    +L+ ++  +   +S    ++ +  +  ++  A D+   +
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 2/365 (0%)

Query: 158  KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            K+ H ++   G   D   +T    MY    +I+ A  +F+ +P      WN ++ GFA +
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 218  GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            G    +L+L ++M E+G + D       L + A +  L+ GK +H + +  G  + + V 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             ALVDMYAKCG +E ARLVFD M  R++VSW SMI+ Y   G   E +  F  M   GV 
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 338  PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
            P  V+I+  L AC +LG L +G + H  + Q     D+ +  +++ MYSKC  +D A  +
Sbjct: 917  PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976

Query: 398  FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
            F +  GK LV W+AMI  Y  +G   +A++ F +M    ++P   T   V+ A +   ++
Sbjct: 977  FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036

Query: 458  RYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
               K    L+       + +     ++D+  + G +  A  L + M  E   + W  ++ 
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096

Query: 516  GYGTH 520
                H
Sbjct: 1097 ACRIH 1101



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 135/281 (48%), Gaps = 10/281 (3%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           H + ++ + P+ +    +     V  +L+E ++I  + +  G        T L+ ++ K 
Sbjct: 296 HEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC 355

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
           +   +A  +F+ +P K    +  +L GYA+      ++     M  D + P       +L
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
               ++G  ++   +HG ++ +GF+ ++F    ++ +Y+KCG + +A K+F  M  RD+V
Sbjct: 416 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 475

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIG-----K 259
            W++++A +  +G    AL++  +M +    R + +T +SIL A ++ G +  G     +
Sbjct: 476 IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDR 535

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            VH Y +R   +        +VD+  + G++  A  + + M
Sbjct: 536 MVHDYQLRPDSEHF----GIMVDLLGRIGQLGKAMDIINRM 572



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 14/186 (7%)

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L ++ ++++   K   +  +   P    +S     K  HA +     + +  ++T    M
Sbjct: 705 LQFWQRIKATESK---YKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIM 761

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y     +  A  +F+ +       WNVMI G+ T G   +++EL++KM+E   KP+   F
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821

Query: 546 LCAISACSHSGLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
             A+ +C+    ++ G  IH          D  ++       A+VD+  + G +  A   
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD------AALVDMYAKCGDIEAARLV 875

Query: 601 IQKMPI 606
             KM +
Sbjct: 876 FDKMAV 881


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/615 (41%), Positives = 387/615 (62%), Gaps = 2/615 (0%)

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR-GDFITIVSILPAVANVGSLRIG 258
           P      +N ++      G  E AL L   M +      D  T+   L + + + +L +G
Sbjct: 79  PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + +  YA++ G  +   V ++L+ MYA C  V  A+L+FD ++   VV WN++I AY++ 
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           GN  E + +F+ ML+ GV    +T++  + AC  +GD + G +V + +D+  L  + ++ 
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            +LI MY+KC ++ +A  +F  +Q + +V+W+AMI GY Q  +  EAL  F +M+   ++
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+  TMVSV+ A A L  +   KW+H+ + R      + + TAL+D YAKCG +  A   
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F+ M  ++  TW  +I G  T+G G+ A+ELF+ M +   +P D+TF+  + ACSHS LV
Sbjct: 379 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           EEG  +F S+ +DYGI+P  +HYG +VDLLGRAG ++EA+ FI+ MPIEP   ++ A+L 
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           +C +HKNVE+GE+A  ++  L+P   G ++LL+NIYA+   W   A +R  M+ +G++KT
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQ 737
           PGCSL+EL   V  F++  + HPQ K IY  +E +ID IK AGY+P+T  +  +V+++ +
Sbjct: 559 PGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E  +S HSEKLAIAFGL+   PG+TI + KNLRVC DCH+ATK IS V  REI+VRD +R
Sbjct: 619 EVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNR 678

Query: 798 FHCFKNGVCSCGDYW 812
           FH FK+G CSC DYW
Sbjct: 679 FHHFKDGTCSCNDYW 693



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 245/540 (45%), Gaps = 48/540 (8%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSG--LCDQHLFQTKLVSLFCKYNSLS 89
           A +P+     P+     + T  + L ++   +IKSG        F + L +       L 
Sbjct: 8   AALPTPAGAGPAPPHAPLRTDPRYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLP 67

Query: 90  DAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLK 146
            A  +F   P P      Y+ +++        +DA+   + M     V P  +     LK
Sbjct: 68  YAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALK 127

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C  +  +  G+ I    +  G   D F ++ +++MYA C  +  A  +FD + E  +V 
Sbjct: 128 SCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVM 187

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN I+  + +NG     +++   M E G   D IT+VS++ A   +G  ++GK V  Y  
Sbjct: 188 WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVD 247

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
             G     N+ TAL+DMYAKCG +  AR +FDGM+SR+VV+W++MI+ Y +     EA+ 
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F +M    VEP +VT++  L ACA LG LE G +VH  + + +L   + +  +L+  Y+
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  +D A + F  +  K   +W A+I G A NGR  EAL  F  MR  +I+P   T + 
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A +                 SC                    V   R  FD M + +
Sbjct: 428 VLMACSH----------------SCL-------------------VEEGRRHFDSMTQDY 452

Query: 507 -----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
                   +  ++D  G  GL   A +    M   P +PN + +   +S+C+    VE G
Sbjct: 453 GIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTM---PIEPNAVIWRALLSSCAVHKNVEIG 509



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 6/346 (1%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           P   LH     L   +  P +   H  A  L+ C+ +  L   R I    +K GL     
Sbjct: 99  PEDALHLFVEMLDVASVCPDQ---HTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRF 155

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + L+ ++     ++ A  +F+ + +    +++ ++  Y K  +  + V     M    
Sbjct: 156 VLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVG 215

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           VA        ++  CG +G+ + GK +   +   G   +   MT +++MYAKCG++ +A 
Sbjct: 216 VAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKAR 275

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD M  RD+V+W+ +++G+ Q      AL L + M       + +T+VS+L A A +G
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLG 335

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  GK VH Y  R      + + TALVD YAKCG ++ A   F+ M  +N  +W ++I 
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
                G   EA+ +F  M    +EPT+VT +  L AC+    +E G
Sbjct: 396 GMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEG 441



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 12/223 (5%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +  T LV  + K   + DA   FE +P K    +  ++KG A      +A+     MR  
Sbjct: 357 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA 416

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA--MTGVVNMYAKCGQIE 190
            + P    +  +L  C     +  G+  H   +   + +   A     VV++  + G I+
Sbjct: 417 SIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLID 475

Query: 191 EAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAEL---ALDLVTRMHEEGRRGDFITIVSIL 246
           EAY+    MP E + V W  +++  A +   E+   AL  +  ++     GD+I + +I 
Sbjct: 476 EAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLN-PSHSGDYILLSNIY 534

Query: 247 PAVA---NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
            +V    N   +R      G     G  S++ +   +V+ +A+
Sbjct: 535 ASVGQWKNAAMIRKEMKDRGIEKTPGC-SLIELDGVVVEFFAE 576


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/753 (35%), Positives = 443/753 (58%), Gaps = 2/753 (0%)

Query: 62   LIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
            ++   GL    LF    L++++ K      A RVF+ +P++    + T+++G+A     +
Sbjct: 454  VVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFE 513

Query: 121  DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            +A +   R+R++      +  T +LK+   +  +     +H      G   + F  + ++
Sbjct: 514  EASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALI 573

Query: 181  NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            + Y+ CG + +A ++FD +  +D V+W  +V+ +++N   E  L + ++M     + +  
Sbjct: 574  DAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPF 633

Query: 241  TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
             + S+L A   + S+ +GK +H  +++  +D+  +V  AL+DMYAKCG +E ARL F+ +
Sbjct: 634  ALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMV 693

Query: 301  KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             + +V+ W+ MI+ Y +    E+A  +F +M+   V P   ++   L ACA++  L+ G 
Sbjct: 694  TNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGK 753

Query: 361  FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
             +H    ++   +++ + N+LI +Y+KC  ++ + +IFS L+    VSWN +I+GY+++G
Sbjct: 754  QIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSG 813

Query: 421  RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
                AL+ F +MR+ ++     T  SV+ A A  + I +   +H L+ +S F  +  V  
Sbjct: 814  FGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN 873

Query: 481  ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            +LID YAKCG +  AR +F+ + E  + +WN +I GY  HG    A ELF+ M +   K 
Sbjct: 874  SLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKA 933

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            NDITF+  +S C  +GLV +G+  F S++ D+GIEP M+HY  +V LLGRAGRLN+A +F
Sbjct: 934  NDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNF 993

Query: 601  IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
            I  +P  P   V+ A+L +C +HKNVELG  +A ++ E++P +   +VLL+N+Y+AA   
Sbjct: 994  IGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSL 1053

Query: 661  DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            D++A  R  M   G++K PG S VE+K EVH+F  GS  HP  + I   LE L  +    
Sbjct: 1054 DQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIRE 1113

Query: 721  GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
            GYVPDT+ + HD+E+  +  +L  HSE+LA+A+GL+ + PG  I I KNLR C DCH   
Sbjct: 1114 GYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIF 1173

Query: 780  KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K IS +  +EIIVRD++RFH F+ G CSCGDYW
Sbjct: 1174 KVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 249/497 (50%), Gaps = 8/497 (1%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNG--FSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
           Y Y  LL+ C   G+ R G+ +HG ++ +G    LDLF    ++NMY K G    A+++F
Sbjct: 429 YAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVF 488

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +PER++VS+ T+V G A  G  E A  L  R+  EG   +   + ++L  V  + +L 
Sbjct: 489 DGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLG 548

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           +   VH  A + G D    V +AL+D Y+ CG V  AR VFDG+  ++ V+W +M++ Y 
Sbjct: 549 LAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYS 608

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           E   PE  ++IF KM     +     +   L A   L  +  G  +H    +    T+  
Sbjct: 609 ENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERH 668

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           +  +L+ MY+KC  ++ A   F  +    ++ W+ MI  YAQ  +  +A   F +M   +
Sbjct: 669 VYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSS 728

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           + P+ F++ SV+ A A + ++   K IH   I+   E  +FV  ALID+YAKC  + ++ 
Sbjct: 729 VSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSL 788

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +F  + + +  +WN +I GY   G G+AA+ +F +M         +T+   + AC+ + 
Sbjct: 789 EIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTA 848

Query: 557 LVEE--GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            +     +H     K  +  + ++ +  +++D   + G + +A +  + +  E  +  + 
Sbjct: 849 SINHVGQVHCLIE-KSTFNSDTIVSN--SLIDSYAKCGCIRDAREIFETLK-ECDLVSWN 904

Query: 615 AMLGACKIHKNVELGEK 631
           A++    +H    + ++
Sbjct: 905 AIISGYAVHGQAAMAQE 921



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 2/171 (1%)

Query: 32  AYIPSRIYRHPSALLLEVCT-SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           A +PS    + S L     T S+  + ++  LI KS      +    L+  + K   + D
Sbjct: 828 ASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRD 887

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  +FE + +     ++ ++ GYA       A      M  + +      +  LL VCG 
Sbjct: 888 AREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947

Query: 151 VGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            G + +G  +   + ++ G    +   T +V +  + G++ +A      +P
Sbjct: 948 TGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIP 998


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/726 (37%), Positives = 431/726 (59%), Gaps = 9/726 (1%)

Query: 29  SQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           SQR+ +    Y      +L++C  LK L   +R+  +I  +G+    +   KLV ++   
Sbjct: 50  SQRSELELNTY----CSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNC 105

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
             L    R+F+ I +    L++ ++  YAK  +  ++V    +M+   +    Y +T +L
Sbjct: 106 GDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL 165

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
           K      ++R  K +HG ++  GF      +  ++  Y KCG++E A  +FD + +RD+V
Sbjct: 166 KGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVV 225

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SWN++++G   NGF+   L+   +M   G   D  T+V++L A ANVG+L +G+A+H Y 
Sbjct: 226 SWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYG 285

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           ++AGF   V  +  L+DMY+KCG +  A  VF  M    +VSW S+IAA+V  G   EA+
Sbjct: 286 VKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAI 345

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F +M  +G+ P    +   +HACA    L++G  VH  + +  +G+++ ++N+L++MY
Sbjct: 346 GLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMY 405

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           +KC  ++ A  IFS+L  K +VSWN MI GY+QN   NEAL  F  M+ K +KPD  TM 
Sbjct: 406 AKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMA 464

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
            V+PA A L+ +   + IH  ++R  +  ++ V  AL+DMY KCG +  A+ LFDM+ ++
Sbjct: 465 CVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKK 524

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
            +  W VMI GYG HG GK A+  F KM     +P + +F   + AC+HSGL++EG   F
Sbjct: 525 DMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLF 584

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
            S+K +  IEP ++HY  MVDLL R+G L+ A+ FI+ MPI+P   ++GA+L  C+IH +
Sbjct: 585 DSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHD 644

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           VEL EK A  +FEL+P+   Y+VLLAN+YA A  W+++ K++  + K GL+   GCS +E
Sbjct: 645 VELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIE 704

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSH 744
           ++ + + F++G T HPQ+K I + L  L  ++   GY      ++ + +D ++E LL +H
Sbjct: 705 VQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAH 764

Query: 745 SEKLAI 750
           SEKLA+
Sbjct: 765 SEKLAM 770



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           V  NA I  + + G +  A+      RS+  + +  T  SV+   AEL  +   K +H++
Sbjct: 25  VDKNAKICKFCEMGDLRNAMKLLS--RSQRSELELNTYCSVLQLCAELKSLEDGKRVHSI 82

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +  +    +  +   L+ MY  CG +   R +FD +    +  WN+++  Y   G  + +
Sbjct: 83  ISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRES 142

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           V LF KM E   + +  TF C +   + S  V E
Sbjct: 143 VGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRE 176


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/630 (41%), Positives = 395/630 (62%), Gaps = 14/630 (2%)

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           K FDR    D+ SWN+++A  A+ G +  +L   + M +   + +  T    + + + + 
Sbjct: 40  KYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  GK  H  A+  GF+S + VS+AL+DMY+KCG++  AR++FD +  RN+V+W S+I 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 314 AYVEGGNPEEAMRIFQKML---------DQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
            YV+  +  EA+ +F++ L         + G    +V ++  L AC+ + +      VH 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           +  ++ L   + + N+L+  Y+KC +V  +  +F  +  K +VSWN+MI  YAQNG   +
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 425 ALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           A   F  M ++   K +  T+ +++ A A    +R    +H  VI+  +  NV + T++I
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMY KCG    AR  FD M E++V +W  MI GYG HG  + A+++F +M+    KPN I
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+  ++ACSH+G +EEG  +F ++  +Y +EP ++HYG MVDLLGRAG + EA++ I+ 
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M +     ++G++L AC+IHK+VEL E +A  LF+LDP   GY+VLLANIYA A  W  +
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDV 516

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
            ++R +++ +GL K PG SLVELK  VH F  G  +HPQ ++IY +LE L  +++ AGYV
Sbjct: 517 ERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P+  S+ HDV++  +E ++  HSEKLA+AFG++NS PGSTIH+ KNLRVCGDCH   K I
Sbjct: 577 PNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLI 636

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +  REIIVRD  RFH FK+G+CSCGDYW
Sbjct: 637 SKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 226/458 (49%), Gaps = 24/458 (5%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
            T L +LF KY   +D               +++++   A+     +++     MR  D+
Sbjct: 31  NTNLTTLFNKYFDRTDVYS------------WNSLIAELARGGDSCESLRAFSWMRKLDI 78

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P    +   +K C  + ++  GK+ H Q +V GF  DLF  + +++MY+KCG++  A  
Sbjct: 79  KPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARV 138

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM---------HEEGRRGDFITIVSI 245
           +FD +P R++V+W +++ G+ QN  A  AL +              E G   D + ++S+
Sbjct: 139 LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A + V +  + + VHG A++ G D ++ V   L+D YAKCG V  +R VFD M  ++V
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGIFVHK 364
           VSWNSMIA Y + G   +A  +F  ML  G    N VT+   L ACA  G L  G+ +H 
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHD 318

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            + ++    +V M  S+I MY KC + + A + F  ++ K + SW AMI GY  +G   E
Sbjct: 319 QVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFARE 378

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALI 483
           AL+ F +M    +KP+  T +SV+ A +    +    +W +A+      E  V     ++
Sbjct: 379 ALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMV 438

Query: 484 DMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           D+  + G +  A  L   M   R    W  ++     H
Sbjct: 439 DLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 21/263 (7%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           IK GL      +  L+  + K   +S + +VF+ + +K    +++M+  YA+     DA 
Sbjct: 219 IKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAF 278

Query: 124 SFLIRM------RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
                M      +Y++V       + LL  C   G +R G  +H Q+I  G+  ++   T
Sbjct: 279 EVFHGMLKAGGGKYNEV-----TLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMAT 333

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++MY KCGQ E A   FD M E+++ SW  ++AG+  +GFA  ALD+  +M   G + 
Sbjct: 334 SIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKP 393

Query: 238 DFITIVSILPAVANVGSLRIG-----KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           ++IT +S+L A ++ G L  G        H Y +  G    V     +VD+  + G ++ 
Sbjct: 394 NYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPG----VEHYGCMVDLLGRAGYIKE 449

Query: 293 ARLVFDGMK-SRNVVSWNSMIAA 314
           A  +   MK  R+ V W S++AA
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAA 472



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 15/188 (7%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C     LR  + L   +IK G  +  +  T ++ ++CK      A   F+ + +K 
Sbjct: 300 LLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKN 359

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ GY       +A+    +M +  V P    +  +L  C   G +  G     
Sbjct: 360 VRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWR--- 416

Query: 163 QLIVNGFSLDLFAMTGV------VNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFA 215
               N  S +     GV      V++  + G I+EAY +   M   RD V W +++A   
Sbjct: 417 --WFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACR 474

Query: 216 QNGFAELA 223
            +   ELA
Sbjct: 475 IHKDVELA 482


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/770 (38%), Positives = 427/770 (55%), Gaps = 98/770 (12%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT  L+      +   GK IH ++I  G  L +F M  ++N YAK G I +A+++FD MP
Sbjct: 16  YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE------------GRRGDF--------- 239
            + + SWN I++G+A+ G  E A  +   M E              + G F         
Sbjct: 76  VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135

Query: 240 ----------ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
                      T+ ++L + A V  L IG+ VH + ++ G  S ++V+ +L++MYAK G 
Sbjct: 136 MVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGD 195

Query: 290 VETARLVFDGMK-------------------------------SRNVVSWNSMIAAYVEG 318
             TA++VFD MK                                R+VVSWN+MI+ Y + 
Sbjct: 196 PVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQH 255

Query: 319 GNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
           G   EA+ IF KML D   +P   T+  AL ACA+L +L+ G  +H  + + +  T  ++
Sbjct: 256 GFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAV 315

Query: 378 TNSLISMYSKCKKVDRAADI---------------------------------FSKLQGK 404
            N+LISMYSK   V+ A  I                                 F  L+ +
Sbjct: 316 GNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVR 375

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W AMI+GY QNG   +A+  F  M  +  KP+++T+ +++   + L+ + + + IH
Sbjct: 376 DVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIH 435

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLG 523
           A   RS    +V V  ALI MYAK G++  AR +F++++ +R   TW  MI     HGLG
Sbjct: 436 ASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLG 495

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           + A+ LF +MLE   KP+ IT++  +SAC+H GLVE+G  Y+  ++  + I P   HY  
Sbjct: 496 EEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYAC 555

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DL GRAG L EA  FI+ MPIEP +  +G++L +CK+HKNVEL E AA RL  ++P+ 
Sbjct: 556 MIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPEN 615

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            G +  LAN+Y+A   W+  A +R  M+ KG++K  G S V++KN+VH F      HPQ 
Sbjct: 616 SGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQR 675

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
             IY  +  +  EIK  G+VPDT S+ HD+E+ ++E +LS HSEKLAIAFGL+ +   +T
Sbjct: 676 DAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTT 735

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I KNLRVC DCH+A K+IS + GREIIVRD  RFH FKNG+CSC DYW
Sbjct: 736 LRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 244/515 (47%), Gaps = 76/515 (14%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K   L +A RVFE +P+     +  M+ GY +    ++A+     M  DDV P 
Sbjct: 85  ILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPT 144

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +L  C  V  +  G+++H  ++ +G S  +     ++NMYAK G    A  +FD
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFD 204

Query: 198 RMP-------------------------------ERDLVSWNTIVAGFAQNGFAELALDL 226
           RM                                ERD+VSWN +++G+ Q+GF   ALD+
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264

Query: 227 VTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            ++M  +   + D  T+ S L A AN+ +L++GK +H + +R  FD+   V  AL+ MY+
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324

Query: 286 KCGRVET---------------------------------ARLVFDGMKSRNVVSWNSMI 312
           K G VE                                  AR +FD ++ R+VV+W +MI
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMI 384

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             YV+ G  ++AM +F+ M+ +G +P N T+   L   + L  L+ G  +H    +    
Sbjct: 385 VGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNA 444

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCK 431
           + VS++N+LI+MY+K   ++ A  +F+ +  K   ++W +MI+  AQ+G   EAL  F +
Sbjct: 445 SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFER 504

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA-----LIDMY 486
           M    IKPD  T V V+ A   + ++   +  + L+  +    +  + T      +ID++
Sbjct: 505 MLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNA----HKIIPTPSHYACMIDLF 560

Query: 487 AKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            + G +  A A  + M  E  V  W  ++     H
Sbjct: 561 GRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 158/388 (40%), Gaps = 66/388 (17%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAK 115
           R+I     +SG          L++++ K  S++DA  VF  I  K D + + +M+   A+
Sbjct: 432 RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQ 491

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL--DL 173
               ++A++   RM  + + P    Y  +L  C  VG + +G+  +  L+ N   +    
Sbjct: 492 HGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYY-NLMQNAHKIIPTP 550

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                +++++ + G ++EA+   + MP E D+++W +++A    +   ELA     R+  
Sbjct: 551 SHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERL-- 608

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                       +L    N G+                       +AL ++Y+ CG+ E 
Sbjct: 609 ------------LLIEPENSGAY----------------------SALANVYSACGQWEN 634

Query: 293 ARLVFDGMKSRNV-----VSWNSM-----IAAYVEGGNPE-----EAM-RIFQKMLDQGV 336
           A  +   MK + V      SW  +     I    +G +P+     E M +I++++   G 
Sbjct: 635 AANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGF 694

Query: 337 EPTNVTIMEALHACADLGDLERGIFVH---KLLDQLKL-GTDVSMTNSLISMYSKCKKVD 392
            P   +++  L       +L+  I  H   KL     L  T  + T  ++     C    
Sbjct: 695 VPDTESVLHDLEE-----ELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCH 749

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNG 420
            A    SKL G+ ++  +A    + +NG
Sbjct: 750 SAIKFISKLVGREIIVRDATRFHHFKNG 777


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 296/786 (37%), Positives = 453/786 (57%), Gaps = 17/786 (2%)

Query: 43  SALLLEVCTSLKE--LRRILP-LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           S+LLL+ C   K   L ++L   +  S L    L    L++L+ K N    A  +F+ + 
Sbjct: 55  SSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSME 114

Query: 100 D-KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRR 156
           + K D + Y +++  +A   +   AV    ++   D V P  Y +T +++ C   G  + 
Sbjct: 115 NSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKT 174

Query: 157 GKEIHGQLIVNGFSLDLFAMTG--VVNMYAK---CGQIEEAYKMFDRMPERDLVSWNTIV 211
           G  + G ++  G+  D     G  +++M+ K      +E A K+FD+M E+++V+W  ++
Sbjct: 175 GLCLFGFVLKTGY-FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233

Query: 212 AGFAQNGFAELALDLVTRMH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
              AQ G+ + A+DL   M    G   D  T+  ++   A +  L +GK +H + +R+G 
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN--PEEAMRIF 328
              + V  +LVDMYAKCG V+ AR VFDGM+  NV+SW +++  YV GG     EAMR+F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353

Query: 329 QKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
             ML QG V P   T    L ACA L D + G  VH    +L L     + N L+S+Y+K
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAK 413

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
             +++ A   F  L  K LVS   +     ++  +N   +   ++        SFT  S+
Sbjct: 414 SGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASL 473

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +   A +  I   + IHA+V++  F  ++ V  ALI MY+KCG    A  +F+ M + +V
Sbjct: 474 LSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNV 533

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            TW  +I+G+  HG    A+ELF  MLE   KPND+T++  +SACSH GL++E   +FTS
Sbjct: 534 ITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTS 593

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           ++ ++GI P M+HY  MVDLLGR+G L+EA +FI  MP +    V+   LG+C++H+N +
Sbjct: 594 MRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTK 653

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LGE AA  + E +P +   ++LL+N+YA    W+ +A +R  M++K + K  G S +E++
Sbjct: 654 LGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVE 713

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
           N+VH F+ G T HP++++IY  L+ L  +IK  GYVP+T+ + HDVED  +E  L  HSE
Sbjct: 714 NQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSE 773

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           KLA+AF L+++     I + KNLRVCGDCH A KYIS+V+GREI+VRD +RFH  K+G C
Sbjct: 774 KLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTC 833

Query: 807 SCGDYW 812
           SC DYW
Sbjct: 834 SCNDYW 839



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 58/373 (15%)

Query: 320 NPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           NP++  +    +     E T+    +T    L  C    +   G  +H  L    L  D 
Sbjct: 28  NPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDT 87

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            + NSLI++YSK      A  IF  ++   + +VS++++I  +A N    +A+  F ++ 
Sbjct: 88  LLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLL 147

Query: 434 SKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGA 491
            ++ + P+ +   +VI A  +    +    +   V+++  F+ +V V   LIDM+ K  +
Sbjct: 148 LQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCS 207

Query: 492 VG---TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLC 547
           +    +AR +FD M E++V TW +MI     +G    A++LF +ML      P+  T   
Sbjct: 208 LADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTG 267

Query: 548 AISACS-----------HS------------------------GLVEEGIHYFTSLKKDY 572
            IS C+           HS                        GLV+E    F  +++  
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE-- 325

Query: 573 GIEPVMDHYGAMVD--LLGRAGRLNEAWDFIQKMPIEPGIT----VFGAMLGACKIHKNV 626
               VM  + A+V+  + G  G   EA      M ++ G+      F  +L AC    + 
Sbjct: 326 --HNVMS-WTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDF 382

Query: 627 ELGEKAANRLFEL 639
           + GE+   +  +L
Sbjct: 383 DFGEQVHGQTIKL 395


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/781 (36%), Positives = 453/781 (58%), Gaps = 16/781 (2%)

Query: 46  LLEVCTSLKELRRILP---LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++ C  + E++  L    L++K+ L +       LVS +    S+SDA RVF+ +P++ 
Sbjct: 190 VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERN 249

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRM--RYDDVA--PVVYNYTYLLKVCGDVGEIRRGK 158
              +++M++ ++     ++    L +M  + D++A  P V     +L VC    EI  GK
Sbjct: 250 LVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGK 309

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +HG  +      ++     +++MY+KCG I +A  +F     +++VSWNT+V GF+  G
Sbjct: 310 GVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAG 369

Query: 219 FAELALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN- 275
                 DL+ +M   G   R D +TI++ +P       L   K +H Y+++  F  + N 
Sbjct: 370 DIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEF--VHNN 427

Query: 276 --VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
             V+ A V  YAKCG +  A  VF  ++S+ V SWN++I  Y +  +P  ++  + +M  
Sbjct: 428 ELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS 487

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+ P   T+   L AC+ +  L+ G  VH L+ + +L  D  +  SL+S+Y  C ++  
Sbjct: 488 SGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELST 547

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  ++ KTLVSWN M+ GY QNG    AL+ F +M    ++P   +M+SV  A + 
Sbjct: 548 AHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSL 607

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L  +R  +  H   ++   E N F+  ++IDMYAK G+V  +  +F+ + ER V +WN M
Sbjct: 608 LPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAM 667

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           + GYG HG  K A++LF +M      P+++TFL  ++AC+HSGLV EG+ Y   +K  +G
Sbjct: 668 VMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFG 727

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDF-IQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           + P + HY  ++D+L RAG+L+EA     ++M  EPG+ ++  +L +C+IHKN+E+GEK 
Sbjct: 728 MNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKI 787

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +LF  +P++   +VLL+N+YA +  WD++ KVR  M++  L+K  GCS +EL  +V S
Sbjct: 788 AAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFS 847

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           F +G +     + I +    L  EI   GY PDT+S+ HD+ +  +   L  HSEKLAI 
Sbjct: 848 FVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAIT 907

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +GL+ +S G+T+ + KNLR+C DCHNA K IS V  REI+VRD  RFH FKNG CSCGDY
Sbjct: 908 YGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDY 967

Query: 812 W 812
           W
Sbjct: 968 W 968



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 457 IRYAKWIHALVIRSCFEKNVFVM-TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           I+  + IH LV  S    N  V+ T +I MY+ CG+   +R++FD + ++++  WN +I 
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156

Query: 516 GYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            Y  + L    +E+F KM+ E    P++ TF C + AC+    V+ G+     + K   +
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           E V     A+V   G  G +++A    + MP E  +  + +M+
Sbjct: 217 EDVFVS-NALVSFYGTNGSVSDALRVFKIMP-ERNLVSWNSMI 257


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/740 (37%), Positives = 426/740 (57%), Gaps = 7/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++ K   + D   VFE +P +    + ++L GY +  +  D ++   RMR + V 
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + +T +L      G +  G+ +H Q +  G    +F    ++NMY+KCG +EEA  +
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F +M  RD+VSWNT++AG   N     AL L         +    T  +++   AN+  L
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
            + + +H   ++ GF S  NV TA++D Y+KCG ++ A  +F  M  S+NVVSW +MI  
Sbjct: 319 ALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGG 378

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            ++  +   A  +F +M +  V+P   T    L A   +   +    +H  + +      
Sbjct: 379 CIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQ----IHAQIIKTNYQHA 434

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            S+  +L++ YSK    + A  IF  +  K +V+W+AM+  Y+Q G  + A N F KM  
Sbjct: 435 PSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSM 494

Query: 435 KNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           + +KP+ FT+ S I A A  +  I   +  HA+ I+  ++  + V +AL+ MYA+ G++ 
Sbjct: 495 QGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSID 554

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +AR +F+   +R + +WN MI GY  HG  K A++ F +M     + +  TFL  I  C+
Sbjct: 555 SARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCT 614

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV+EG  YF S+  D+ I P M+HY  MVDL  RAG+L+E  + I+ MP   G  V+
Sbjct: 615 HAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVW 674

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +LGAC++HKNVELG+ AA +L  L+PD+   +VLL+NIYAAA  W +  +VR +M+ K
Sbjct: 675 RTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSK 734

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K  GCS +++KN+VHSF +    HP S++IY  L+ +   +K  GY P+T+ + HD+
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDI 794

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  +E +L  HSE+LA+AFGL+ + P + + I KNLRVCGDCH   K +SL+  REII+
Sbjct: 795 AEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIM 854

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F  G CSCGD+W
Sbjct: 855 RDCSRFHHFNAGACSCGDFW 874



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 248/459 (54%), Gaps = 8/459 (1%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           + +LKVCG + +   G+++H   +  GF   ++   T +V+MY KCG +E+   +F+ MP
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP 162

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +R++V+W +++ G+ Q       + L  RM  EG   +  T  S+L AVA+ G++ +G+ 
Sbjct: 163 KRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRR 222

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH  +++ G  S V V  +L++MY+KCG VE A+ VF  M++R++VSWN+++A  +   +
Sbjct: 223 VHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEH 282

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA+++F        + +  T    +  CA+L  L     +H  + +    +D ++  +
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA 342

Query: 381 LISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           ++  YSKC ++D A +IF  + G + +VSW AMI G  QN  +  A   F +MR  N+KP
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKP 402

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           + FT  +V+ A    S+      IHA +I++ ++    V TAL+  Y+K G    A ++F
Sbjct: 403 NEFTYSTVLTA----SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIF 458

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC-SHSGLV 558
            M++ + V  W+ M+  Y   G    A  +F KM     KPN+ T   AI AC S +  +
Sbjct: 459 KMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGI 518

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           ++G   F ++   Y  +  +    A+V +  R G ++ A
Sbjct: 519 DQG-RQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA 556



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 190/368 (51%), Gaps = 10/368 (2%)

Query: 192 AYKMFDRMPERDLVSWNT----IVAGFAQNGFAE-LALDLVTRMHEEGR-RGDFITIVSI 245
           A +  D MP RD  + ++     +  + + G     ALD    +H  GR +G  ++   +
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVS--RV 105

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSI-VNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           L     +     G+ +H   ++ GFD   V V TALVDMY KCG VE  R+VF+GM  RN
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VV+W S++  YV+G    + M +F +M  +GV P   T    L A A  G ++ G  VH 
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              +    + V + NSLI+MYSKC  V+ A  +F +++ + +VSWN ++ G   N    E
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F   R+   K    T  +VI   A L  +  A+ +H+ V++  F  +  VMTA++D
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMD 345

Query: 485 MYAKCGAVGTARALFDMM-NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            Y+KCG +  A  +F +M   ++V +W  MI G   +     A  LF++M E   KPN+ 
Sbjct: 346 AYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEF 405

Query: 544 TFLCAISA 551
           T+   ++A
Sbjct: 406 TYSTVLTA 413



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 183/408 (44%), Gaps = 41/408 (10%)

Query: 293 ARLVFDGMKSRNVVSWNS----MIAAYVEGGNPE-EAMRIFQKMLDQGVEPTNVTIMEAL 347
           AR   DGM SR+  + +S     I  Y   G    EA+  F  +   G       +   L
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTD---VSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             C  + D   G  +H L   +K G D   V +  +L+ MY KC  V+    +F  +  +
Sbjct: 107 KVCGLIPDRVSGEQLHCLC--VKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W +++ GY Q    ++ +  F +MR++ + P+ FT  SV+ A+A    +   + +H
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A  ++      VFV  +LI+MY+KCG V  A+A+F  M  R + +WN ++ G   +    
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACS-----------HSGLVEEGIHYFTSLKKDYG 573
            A++LF+       K +  T+   I  C+           HS +++ G H   ++     
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV----- 339

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           +  +MD Y        + G L++A++    MP    +  + AM+G C  + ++ L     
Sbjct: 340 MTAIMDAY-------SKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALF 392

Query: 634 NRLFE--LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           +R+ E  + P+E  Y  +L      AS+   L ++   + K   Q  P
Sbjct: 393 SRMREDNVKPNEFTYSTVL-----TASIPILLPQIHAQIIKTNYQHAP 435



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 32/173 (18%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 47  LEVCTS----LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++ C S    + + R+   + IK    D     + LV+++ +  S+  A  VFE   D+ 
Sbjct: 508 IDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRD 567

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++M+ GYA+     +A+    +M    +      +  ++  C   G ++ G++   
Sbjct: 568 LVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFD 627

Query: 163 QLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
            ++++   S  +   + +V++Y++ G+++E   + + MP     + W T++  
Sbjct: 628 SMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 287/779 (36%), Positives = 448/779 (57%), Gaps = 21/779 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C  L +L   R I   I++SGL  + +    L+ ++     ++ A  +FE +   L
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDL 193

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            + ++  +   A+   L  A+    RM+ + V P        L VC     IR+ + IH 
Sbjct: 194 VS-WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHF 249

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  +G    L   T + + YA+ G + +A ++FDR  ERD+VSWN ++  +AQ+G    
Sbjct: 250 IVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSE 309

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L  RM  EG     +T+V+   A     SLR G+ +HG A+  G D  + +  AL+D
Sbjct: 310 AALLFARMLHEGISPSKVTLVN---ASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLD 366

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY +CG  E AR +F  +   N VSWN+MIA   + G  + A+ +FQ+M  +G+ P   T
Sbjct: 367 MYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRAT 425

Query: 343 IMEALHACADLGDLER----GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            +  L A A   +  R    G  +H  +      ++ ++  +++ MY+ C  +D AA  F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485

Query: 399 SK--LQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +  ++ +  +VSWNA+I   +Q+G    AL +F +M    + P+  T V+V+ A A  +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMI 514
            +   + +H  +  S  E N+FV TAL  MY +CG++ +AR +F+ +  ER V  +N MI
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
             Y  +GL   A++LF +M +  ++P++ +F+  +SACSH GL +EG   F S+++ YGI
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
            P  DHY   VD+LGRAG L +A + I+ M ++P + V+  +LGAC+ +++V+ G  A +
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
            + ELDP +   +V+L+NI A A  WD+ A+VRT ME +GL+K  G S +E+K+ VH F 
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFV 785

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
           +G   HP+S+ IY  LE L  EI+  GYVPDT  +   V++  +E LL  HSE+LAIA G
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALG 845

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +++SS   T+ + KNLRVC DCHNATK+IS +  +EI+VRD HRFH F +G CSCGDYW
Sbjct: 846 VMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 178/576 (30%), Positives = 298/576 (51%), Gaps = 22/576 (3%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L + RRI   I+  GL ++      L+ L+ K  SL D   VF  +  + +A + T++  
Sbjct: 45  LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y +      A+    RM+ + V      +  +LK C  +G++ +G+ IH  ++ +G    
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGK 162

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                 ++++Y  CG +  A  +F++M ERDLVSWN  +A  AQ+G   +AL+L  RM  
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQL 221

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG R   IT+V  L   A +   R  +A+H     +G +  + VSTAL   YA+ G +  
Sbjct: 222 EGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQ 278

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VFD    R+VVSWN+M+ AY + G+  EA  +F +ML +G+ P+ VT++ A   C+ 
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS 338

Query: 353 L--GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           L  G +  G  + K LD+     D+ + N+L+ MY++C   + A  +F ++     VSWN
Sbjct: 339 LRFGRMIHGCALEKGLDR-----DIVLGNALLDMYTRCGSPEEARHLFKRIPCNA-VSWN 392

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA----ELSVIRYAKWIHAL 466
            MI G +Q G++  A+  F +M+ + + P   T ++++ A+A    E   +   + +H+ 
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNERH-VTTWNVMIDGYGTHGLG 523
           ++   +     + TA++ MYA CGA+  A A F    M +RH V +WN +I     HG G
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           K A+  F +M      PN IT +  + AC+ +  + EG      L+   G+E  +    A
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMESNLFVATA 571

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           +  + GR G L  A +  +K+ +E  + +F AM+ A
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 253/469 (53%), Gaps = 17/469 (3%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+  GD   + +G+ IH +++  G   +L     ++ +Y KC  + +  ++F R+  RD
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
             SW TI+  + ++G A+ A+ +  RM +EG R D +T +++L A A +G L  G+++H 
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           + + +G      ++  L+ +Y  CG V +A L+F+ M+ R++VSWN+ IAA  + G+   
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGI 211

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +FQ+M  +GV P  +T++ AL  CA +   +    +H ++ +  L   + ++ +L S
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFIVRESGLEQTLVVSTALAS 268

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            Y++   + +A ++F +   + +VSWNAM+  YAQ+G ++EA   F +M  + I P   T
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           +V+   A    S +R+ + IH   +    ++++ +  AL+DMY +CG+   AR LF  + 
Sbjct: 329 LVN---ASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP 385

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEG--PTKPNDITFLCAISACSHSG-LVE 559
              V +WN MI G    G  K AVELF +M LEG  P +   +  L A+++       + 
Sbjct: 386 CNAV-SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMA 444

Query: 560 EGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           EG    + +    Y  EP +    A+V +    G ++EA    Q+  +E
Sbjct: 445 EGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAME 491



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 224/424 (52%), Gaps = 15/424 (3%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           P+RI      + L VC ++++ + I  ++ +SGL    +  T L S + +   L  A  V
Sbjct: 226 PARI---TLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEV 282

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+   ++    ++ ML  YA+   + +A     RM ++ ++P   +   L+        +
Sbjct: 283 FDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP---SKVTLVNASTGCSSL 339

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R G+ IHG  +  G   D+     +++MY +CG  EEA  +F R+P  + VSWNT++AG 
Sbjct: 340 RFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGS 398

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN----VGSLRIGKAVHGYAMRAGF 270
           +Q G  + A++L  RM  EG      T +++L AVA+      ++  G+ +H   +  G+
Sbjct: 399 SQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGY 458

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFD--GMKSR-NVVSWNSMIAAYVEGGNPEEAMRI 327
            S   + TA+V MYA CG ++ A   F    M+ R +VVSWN++I++  + G+ + A+  
Sbjct: 459 ASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGF 518

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F++M   GV P  +T +  L ACA    L  G  VH  L    + +++ +  +L SMY +
Sbjct: 519 FRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGR 578

Query: 388 CKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           C  ++ A +IF K+   + +V +NAMI  Y+QNG   EAL  F +M+ +  +PD  + VS
Sbjct: 579 CGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVS 638

Query: 447 VIPA 450
           V+ A
Sbjct: 639 VLSA 642


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/746 (37%), Positives = 450/746 (60%), Gaps = 17/746 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           L++L+ K ++++ A  VF+ +P  L  L  +  M    ++  +  +A+        + + 
Sbjct: 90  LLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLL 149

Query: 136 PVVYNYTYLLKVCGDVGEIRR--GKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEA 192
           P  +      + C    E+    G  + G +   GF   D+     +++M+AK G +   
Sbjct: 150 PNAFTLCAATQACF-ASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAM 208

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            ++FD + ER +V W  ++  +AQ+G+++ A++L   M E G + D  T+ S+L A   +
Sbjct: 209 RRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTEL 268

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNVVSWN 309
           GS R+G+ +H  A+R G +S   VS  LVDMYAK      +  AR VF+ M   NV++W 
Sbjct: 269 GSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWT 328

Query: 310 SMIAAYVEGGNPE-EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           ++++ YV+ G+ + + M +F KML++G+ P ++T    L ACA+LGD + G  +H    +
Sbjct: 329 ALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVK 388

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
             L     + N+L+SMY++   ++ A   F +L  K +VS++  + G   +GR N   +Y
Sbjct: 389 SNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG---DGRSNTYQDY 445

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
             ++    +   +FT  S+I A A + ++   + +HAL +++ F  +  +  +L+ MY++
Sbjct: 446 --QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A  +FD MN+ +V +W  MI G   HG    A+ELF+ M+    KPND+T++  
Sbjct: 504 CGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAV 563

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACSH+GLV+EG  +F  ++K +G+ P M+HY  MVDLLGR+G + +A DFI +MP + 
Sbjct: 564 LSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQV 623

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              V+  +LGACK H N+++GE AAN + +L+P +   +VLL+N+YA A +WD++A++R+
Sbjct: 624 DALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRS 683

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           +M  K L K  G S + + N +H F +G T HPQ++ IYT LETLI EIK  GYVPDT+ 
Sbjct: 684 LMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSV 743

Query: 729 I-HDVEDYVQENLLSSHSEKLAIAFGLLN-SSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
           + HD+ D ++E  L  HSEK+A+AFGL++ +S    I I KNLRVC DCH+A KY+S  T
Sbjct: 744 VLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKAT 803

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GREII+RD +RFH  K+G CSCG+YW
Sbjct: 804 GREIILRDSNRFHRMKDGECSCGEYW 829


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/772 (35%), Positives = 438/772 (56%), Gaps = 32/772 (4%)

Query: 45  LLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           ++L  CT ++     +++  L++K G   +      LV+L+ +  +LS A ++F  +  +
Sbjct: 256 IVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR 315

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               Y++++ G A+   ++ A++   +M  D   P       LL  C  VG +  GK+ H
Sbjct: 316 DRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFH 375

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              I  G + D+     ++++Y KC  I+ A++ F    + D ++               
Sbjct: 376 SYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN--------------- 420

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            +  + T+M  EG   +  T  SIL     +G+  +G+ +H   ++ GF   V VS+ L+
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAK G+++ A  +F  +K  +VVSW +MIA Y +     EA+ +F++M DQG++  N+
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
               A+ ACA +  L++G  +H          D+S+ N+L+S+Y++C KV  A   F ++
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 600

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K  VSWN+++ G+AQ+G   EALN F +M    ++ +SFT  S + A A ++ +R  K
Sbjct: 601 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGK 660

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH ++ ++ ++    V  ALI +YAKCG +                +WN MI GY  HG
Sbjct: 661 QIHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHG 707

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  A++LF  M +    PN +TF+  +SACSH GLV+EGI YF S+ + + + P  +HY
Sbjct: 708 CGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHY 767

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VDLLGR+G L+ A  F+++MPI+P   V+  +L AC +HKN+++GE AA+ L EL+P
Sbjct: 768 ACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEP 827

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
            +   +VL++N+YA +  WD   + R +M+ +G++K PG S VE+ N VH+F++G   HP
Sbjct: 828 KDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHP 887

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           ++  IY +L  L       GYVP  NS + D E   ++     HSE+LAIAFGLL+ +  
Sbjct: 888 RADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSS 947

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +++ KNLRVC DCHN  K++S +T R IIVRD +RFH FK G CSC DYW
Sbjct: 948 TPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 251/525 (47%), Gaps = 35/525 (6%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           KL+  +  +  L+ A  VF+ +P +  + ++ +   +     +        RM   +V  
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161

Query: 137 VVYNYTYLLKVC-GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
               +  +L+ C G+    R  ++IH + I +GF    F    ++++Y K G +  A K+
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +  RD VSW  +++G +QNG+ E A+ L  ++              +L A   V   
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFF 267

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GK +HG  ++ GF S   V  ALV +Y++ G + +A  +F  M  R+ VS+NS+I+  
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G    A+ +F+KM     +P  VT+   L ACA +G L  G   H    +  + +D+
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  SL+ +Y KC  +  A + F               L Y Q   +N++   F +M+ +
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIE 432

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I P+ FT  S++     L      + IH  V+++ F+ NV+V + LIDMYAK G +  A
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F  + E  V +W  MI GY  H     A+ LF +M +   K ++I F  AISAC+  
Sbjct: 493 LKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552

Query: 556 GLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
             +++G  IH  + L    G    +    A+V L  R G++ EA+
Sbjct: 553 QALDQGRQIHAQSCLS---GYSDDLSIGNALVSLYARCGKVREAY 594



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 207/467 (44%), Gaps = 36/467 (7%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +++ Y   G +  A  +FD MP R L  WN I   F           L  RM  +    D
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 239 FITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
                 +L   + N  S R  + +H   + +GF+S   +   L+D+Y K G + +A+ VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           + +K+R+ VSW +MI+   + G  EEAM +F +++              L AC  +   E
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEFFE 268

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L+ +    ++  + N+L+++YS+   +  A  IF  +  +  VS+N++I G A
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           Q G +N AL  F KM     KPD  T+ S++ A A +  +   K  H+  I++    ++ 
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V  +L+D+Y KC  + TA   F                 YG       + ++F +M    
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFFLC---------------YGQLDNLNKSFQIFTQMQIEG 433

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN  T+   +  C+  G  + G    T + K  G +  +     ++D+  + G+L+ A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHA 492

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
               +++  E  +  + AM+     H         A  LF+   D+G
Sbjct: 493 LKIFRRLK-ENDVVSWTAMIAGYTQHDKF----TEALNLFKEMQDQG 534


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/710 (38%), Positives = 409/710 (57%), Gaps = 59/710 (8%)

Query: 159  EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV------- 211
            ++H  L + G      A T ++  YA+ G  E + ++FD  P+ D   W  ++       
Sbjct: 366  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 212  --------------------------------AGFA------QNGFAELALDLVTRMHEE 233
                                            +GF       +NG A   LD+ ++M  E
Sbjct: 426  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE 485

Query: 234  GRRGDFITIVSILPAVANVGSLRIGK--------AVHGYAMRAGFDSIVN-VSTALVDMY 284
                D +T++S+  A + +GSLR+G+        +VHG+ +R   D  ++ +  AL+++Y
Sbjct: 486  AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 545

Query: 285  AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            A  G +     VF+ +K + ++SWN++I+ +   G PEEA+ +F +M  QG+ P + ++ 
Sbjct: 546  ADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 605

Query: 345  EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             +L AC  +   + G  +H  + +     D  + N+LI MY+KC  V  A  +F K++ K
Sbjct: 606  SSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEK 664

Query: 405  TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +LV+WN+MI G++QNG   EA+  F +M    +K D  T +SVI A + L  +   KW+H
Sbjct: 665  SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVH 724

Query: 465  ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
              +I     K+ ++ TAL DMY+KCG +  A  +FD M+ER + +W+VMI GYG HG   
Sbjct: 725  HKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQIN 784

Query: 525  AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A + LFN+ML    KPNDITF+  +SACSH+G VEEG  YF S+  ++G+EP  DH+  M
Sbjct: 785  ATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACM 843

Query: 585  VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
            VDLL RAG LN A+  I  +P     +++GA+L  C+IHK +++ +     L ++D  + 
Sbjct: 844  VDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADT 903

Query: 645  GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            GY+ LL+NIYA    WDK  KVR++M+ KGL+K PG S +E+  +++ F  G T H Q+K
Sbjct: 904  GYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTK 963

Query: 705  RIYTFLETLIDEIKAAGY--VPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
             IY FLE     + A  Y   PD NSI     + +EN + SHSEKLAIAFG++N+ PG+T
Sbjct: 964  DIYRFLENFRSLVHAQVYDSEPD-NSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTT 1022

Query: 763  IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + I KNLRVC DCH+  K  S +TGREII+RD++RFHCF+NG CSC DYW
Sbjct: 1023 LRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 196/373 (52%), Gaps = 3/373 (0%)

Query: 53  LKELRRILPLIIKSGLCDQ-HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +KE R +   +I+  +  +       L+ L+    +L D  +VFE I +K    ++T++ 
Sbjct: 515 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 574

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            + +    ++A+   ++M+   + P  Y+    L  CG +   + G +IHG +I  G + 
Sbjct: 575 IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NF 633

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           + F    +++MYAKCG +  A KMF+++ E+ LV+WN+++ GF+QNG++  A+ L  +M+
Sbjct: 634 NDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 693

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
               + D +T +S++ A +++G L  GK VH   +  G      + TAL DMY+KCG ++
Sbjct: 694 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 753

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A  VFD M  R++VSW+ MIA Y   G     + +F +ML  G++P ++T M  L AC+
Sbjct: 754 MAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS 813

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WN 410
             G +E G      + +  +         ++ + S+   ++ A  I + L      S W 
Sbjct: 814 HAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWG 873

Query: 411 AMILGYAQNGRVN 423
           A++ G   + R++
Sbjct: 874 ALLNGCRIHKRID 886


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/736 (36%), Positives = 432/736 (58%), Gaps = 1/736 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + K   L+ A R+F+ +P++    + T+++GYA     ++A+    R++ +     
Sbjct: 88  LLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVN 147

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +LKV   +        IH      G   + F  T +++ Y+ CG +  A  +FD
Sbjct: 148 HFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFD 207

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +  +D V+W  +V+ +++N   E AL+  ++M   G + +   + S L A   + S  +
Sbjct: 208 GIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL 267

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +HG +++  +D+  +V  AL+DMYAKCG +E A  +F+ +   +V+ W+ +I+ Y +
Sbjct: 268 GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +M+   V P   ++   L ACA++  LE G  +H L  +L   +++ +
Sbjct: 328 SCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFV 387

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ MY+KC+ ++ + +IFS LQ    VSWN +I+GY Q+G   +AL+ F +MR+ ++
Sbjct: 388 GNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHM 447

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
                T  SV+ A A  S I++A  IH+L+ +S F  +  V  +LID YAKCG +  A  
Sbjct: 448 LSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALK 507

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+ + E  V +WN +I  Y  HG    A+ELF++M +   K ND+TF+  +S C  +GL
Sbjct: 508 VFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGL 567

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G+  F S+  D+ I+P M+HY  +V LLGRAGRL +A  FI  +P  P   V+ A+L
Sbjct: 568 VNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALL 627

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C +HKNV LG  AA ++ +++P +   +VLL+N+YAAA + D++A  R  M   G++K
Sbjct: 628 SSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKK 687

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
             G S VE+K EVH+F  GS  HP  + I   LE L  +    GYVPD N + HDV++  
Sbjct: 688 EAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEE 747

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +  +L  HSE+LA+A+GL  + PG  I I KNLR C DCH   K IS +  REIIVRD++
Sbjct: 748 KARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDIN 807

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F+ G+CSCGDYW
Sbjct: 808 RFHHFEEGICSCGDYW 823



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 264/535 (49%), Gaps = 11/535 (2%)

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
           +R   P   +++ L    L        LDD ++ L   + D      Y     L+ C   
Sbjct: 4   SRSLLPTFSQINGLLSRNLAANEALQWLDDELASLALPKLDS-----YACARFLQRCIAR 58

Query: 152 GEIRRGKEIHGQLIVNG--FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           G+ R G+ +H +++  G    LD F    ++N YAK G +  A ++FD MPER+ VS+ T
Sbjct: 59  GDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVT 118

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           ++ G+A  G  E AL+L  R+  EG   +   + +IL  +  + +  +   +H  A + G
Sbjct: 119 LMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLG 178

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            D    V TAL+D Y+ CG V  AR VFDG+  ++ V+W +M++ Y E   PE A+  F 
Sbjct: 179 HDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFS 238

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           KM   G +P    +  AL A   L     G  +H    +    T+  +  +L+ MY+KC 
Sbjct: 239 KMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCG 298

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            ++ A  IF  +    ++ W+ +I  YAQ+ +  +A   F +M    + P+ F++  V+ 
Sbjct: 299 DIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQ 358

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A ++ +   + IH L I+  +E  +FV  AL+DMYAKC  +  +  +F  + + +  +
Sbjct: 359 ACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVS 418

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN +I GY   G  + A+ +F++M         +TF   + AC+++  ++  +   + ++
Sbjct: 419 WNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIE 478

Query: 570 KD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           K  +  + ++    +++D   + G + +A    + + +E  +  + +++ A  +H
Sbjct: 479 KSTFNNDTIV--CNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALH 530



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 257/513 (50%), Gaps = 16/513 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+  +    ++  A  VF+ I  K    +  M+  Y++    + A++   +MR     
Sbjct: 187 TALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFK 246

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +  T  LK    +     GK IHG  +   +  +      +++MYAKCG IE+A+ +
Sbjct: 247 PNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAI 306

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +P  D++ W+ +++ +AQ+   E A ++  RM       +  ++  +L A AN+  L
Sbjct: 307 FEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFL 366

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G+ +H  A++ G++S + V  AL+DMYAKC  +E +  +F  ++  N VSWN++I  Y
Sbjct: 367 ELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGY 426

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  E+A+ +F +M    +  T VT    L ACA+   ++  + +H L+++     D 
Sbjct: 427 CQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDT 486

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NSLI  Y+KC  +  A  +F  +    +VSWN++I  YA +GR   AL  F +M   
Sbjct: 487 IVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKS 546

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +IK +  T VS++       ++    W+ +++++    + ++   T ++ +  + G +  
Sbjct: 547 DIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTD 606

Query: 495 A-RALFDMMNERHVTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPND-ITFLCAI 549
           A + + D+ +      W  ++     H    LG+ A E   K+L+   +P+D  T++   
Sbjct: 607 ALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAE---KVLD--IEPHDETTYVLLS 661

Query: 550 SACSHSGLVEEGIHYFTSL-----KKDYGIEPV 577
           +  + +G+++E   +  S+     KK+ G+  V
Sbjct: 662 NMYAAAGILDEVALWRKSMRNVGVKKEAGLSWV 694



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 158/321 (49%), Gaps = 16/321 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C ++  L    +I  L IK G   +      L+ ++ K  ++ ++  +F  + D  
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           +  ++T++ GY +    +DA+S    MR   +      ++ +L+ C +   I+   +IH 
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  + F+ D      +++ YAKCG I +A K+F+ + E D+VSWN+I++ +A +G A  
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATN 535

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS----T 278
           AL+L  RM++   + + +T VS+L    + G +  G  +    M    D  +  S    T
Sbjct: 536 ALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMM---MDHRIKPSMEHYT 592

Query: 279 ALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +V +  + GR+  A + + D   + + + W +++++ V   N        +K+LD  +E
Sbjct: 593 CIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLD--IE 650

Query: 338 P---TNVTIMEALHACADLGD 355
           P   T   ++  ++A A + D
Sbjct: 651 PHDETTYVLLSNMYAAAGILD 671


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 441/760 (58%), Gaps = 18/760 (2%)

Query: 58   RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
            R L  ++K   C +++ + K    +        A ++F    D  D + ++  L  + + 
Sbjct: 865  RTLSRVVK---CKKNILELKQFKAY--------ATKLFMYDDDGSDVIVWNKALSRFLQR 913

Query: 117  ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                +AV   + M    VA     +  +L V   +  +  GK+IHG ++ +G    +   
Sbjct: 914  GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973

Query: 177  TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
              ++NMY K G +  A  +F +M E DL+SWNT+++G   +G  E ++ +   +  +   
Sbjct: 974  NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033

Query: 237  GDFITIVSILPAVANV-GSLRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETA 293
             D  T+ S+L A +++ G   +   +H  AM+AG   DS V  STAL+D+Y+K G++E A
Sbjct: 1034 PDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFV--STALIDVYSKRGKMEEA 1091

Query: 294  RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
              +F      ++ SWN+++  Y+  G+  +A+R++  M + G     +T++ A  A   L
Sbjct: 1092 EFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGL 1151

Query: 354  GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              L++G  +H ++ +     D+ +T+ ++ MY KC +++ A  +FS++     V+W  MI
Sbjct: 1152 VGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMI 1211

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
             G  +NG+   AL  + +MR   ++PD +T  +++ A + L+ +   + IHA +++    
Sbjct: 1212 SGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCA 1271

Query: 474  KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             + FVMT+L+DMYAKCG +  AR LF   N R + +WN MI G   HG  K A++ F  M
Sbjct: 1272 FDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYM 1331

Query: 534  LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
                  P+ +TF+  +SACSHSGLV E    F S++K+YGIEP ++HY  +VD L RAGR
Sbjct: 1332 KSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGR 1391

Query: 594  LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
            + EA   I  MP E   +++  +L AC++  + E G++ A +L  L+P +   +VLL+N+
Sbjct: 1392 IEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNV 1451

Query: 654  YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
            YAAA+ W+ +A  R +M K  ++K PG S V+LKN+VH F +G   H ++  IY  +E +
Sbjct: 1452 YAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYI 1511

Query: 714  IDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
            +  I+  GYVPDT+ ++ DVE+  +E  L  HSEKLAIA+GL+ + P +T+ + KNLRVC
Sbjct: 1512 MKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVC 1571

Query: 773  GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GDCH+A KYIS V  REI++RD +RFH F+NG+CSCGDYW
Sbjct: 1572 GDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 216/453 (47%), Gaps = 48/453 (10%)

Query: 157  GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGF 214
            GK  H +++ +G   D F    ++ MYAKCG +  A K+FD  P+  RDLV+WN I++  
Sbjct: 675  GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734

Query: 215  A------QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            A       +GF      L+ R      R    T+  +        S    +++HGYA++ 
Sbjct: 735  AAHADKSHDGFH--LFRLLRRSVVSTTRH---TLAPVFKMCLLSASPSASESLHGYAVKI 789

Query: 269  GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
            G    V V+ ALV++YAK G +  AR++FDGM  R+VV WN M+ AYV+     EAM +F
Sbjct: 790  GLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLF 849

Query: 329  QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
             +    G  P +VT          L  L R +   K + +LK         + + MY   
Sbjct: 850  SEFHRTGFRPDDVT----------LRTLSRVVKCKKNILELK---QFKAYATKLFMYDD- 895

Query: 389  KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
                          G  ++ WN  +  + Q G   EA++ F  M +  +  D  T V ++
Sbjct: 896  -------------DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVML 942

Query: 449  PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              +A L+ +   K IH +V+RS  ++ V V   LI+MY K G+V  AR++F  MNE  + 
Sbjct: 943  TVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLI 1002

Query: 509  TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            +WN MI G    GL + +V +F  +L     P+  T    + ACS      EG +Y  + 
Sbjct: 1003 SWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQ 1058

Query: 569  KKDYGIEP--VMDHY--GAMVDLLGRAGRLNEA 597
                 ++   V+D +   A++D+  + G++ EA
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 176/707 (24%), Positives = 298/707 (42%), Gaps = 81/707 (11%)

Query: 57   RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHTMLKGYA 114
            +R    I+ SG          L++++ K  SLS A ++F+  PD    L  ++ +L   A
Sbjct: 676  KRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALA 735

Query: 115  KFASLD-DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
              A    D       +R   V+   +    + K+C         + +HG  +  G   D+
Sbjct: 736  AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDV 795

Query: 174  FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
            F    +VN+YAK G I EA  +FD M  RD+V WN ++  +        A+ L +  H  
Sbjct: 796  FVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRT 855

Query: 234  GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            G R D +T+ ++   V    ++   K    YA +             + MY   G     
Sbjct: 856  GFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------LFMYDDDG----- 897

Query: 294  RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
                      +V+ WN  ++ +++ G   EA+  F  M++  V    +T +  L   A L
Sbjct: 898  ---------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGL 948

Query: 354  GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              LE G  +H ++ +  L   VS+ N LI+MY K   V RA  +F ++    L+SWN MI
Sbjct: 949  NCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMI 1008

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY-AKWIHALVIRSCF 472
             G   +G    ++  F  +   ++ PD FT+ SV+ A + L    Y A  IHA  +++  
Sbjct: 1009 SGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGV 1068

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
              + FV TALID+Y+K G +  A  LF   +   + +WN ++ GY   G    A+ L+  
Sbjct: 1069 VLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYIL 1128

Query: 533  MLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
            M E   + + IT + A  A      +++G  IH    +K+ + ++  +     ++D+  +
Sbjct: 1129 MQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVV-VKRGFNLDLFVT--SGVLDMYLK 1185

Query: 591  AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA-------ANRLFELDPDE 643
             G +  A     ++P  P    +  M+  C     VE G++          RL ++ PDE
Sbjct: 1186 CGEMESARRVFSEIP-SPDDVAWTTMISGC-----VENGQEEHALFTYHQMRLSKVQPDE 1239

Query: 644  GGYHVLL----------------ANI---------YAAASMWDKLAKVRTIMEKKGLQKT 678
              +  L+                ANI         +   S+ D  AK   I + +GL K 
Sbjct: 1240 YTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1299

Query: 679  PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
                 +   N   +   G  +H  +K    F + +    K+ G +PD
Sbjct: 1300 TNTRRIASWN---AMIVGLAQHGNAKEALQFFKYM----KSRGVMPD 1339



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 8/292 (2%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            LK+ ++I  +++K G        + ++ ++ K   +  A RVF  IP   D  + TM+ G
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213

Query: 113  YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
              +    + A+    +MR   V P  Y +  L+K C  +  + +G++IH  ++    + D
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273

Query: 173  LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
             F MT +V+MYAKCG IE+A  +F R   R + SWN ++ G AQ+G A+ AL     M  
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333

Query: 233  EGRRGDFITIVSILPAVANVGSLRIGKAVHG-YAMRA--GFDSIVNVSTALVDMYAKCGR 289
             G   D +T + +L A ++ G   + +A    Y+M+   G +  +   + LVD  ++ GR
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSG--LVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGR 1391

Query: 290  VETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +E A  V   M      S + +++ A     + E   R+ +K+L   +EP++
Sbjct: 1392 IEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL--ALEPSD 1441



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/382 (20%), Positives = 154/382 (40%), Gaps = 32/382 (8%)

Query: 244  SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM--K 301
            SIL        L +GK  H   + +G      V+  L+ MYAKCG + +AR +FD     
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 302  SRNVVSWNSMIAAY-VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
            +R++V+WN++++A         +   +F+ +    V  T  T+      C          
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 361  FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
             +H    ++ L  DV +  +L+++Y+K   +  A  +F  +  + +V WN M+  Y    
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 421  RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
               EA+  F +      +PD  T+ ++        V++  K I  L     +   +F   
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLS------RVVKCKKNILELKQFKAYATKLF--- 891

Query: 481  ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
                MY   G+               V  WN  +  +   G    AV+ F  M+      
Sbjct: 892  ----MYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            + +TF+  ++  +    +E G      + +  G++ V+     ++++  +AG ++ A   
Sbjct: 934  DGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKAGSVSRARSV 992

Query: 601  IQKMPIEPGITVFGAMLGACKI 622
              +M  E  +  +  M+  C +
Sbjct: 993  FGQMN-EVDLISWNTMISGCTL 1013



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 12/186 (6%)

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P  F+++    A ++LS+    K  HA ++ S    + FV   LI MYAKCG++ +AR L
Sbjct: 657 PQCFSILRQAIAASDLSL---GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKL 713

Query: 499 FDMMNE--RHVTTWNVMIDGYGTHG-LGKAAVELFNKMLEGPTKPNDITFLCAISAC--S 553
           FD   +  R + TWN ++     H         LF  +          T       C  S
Sbjct: 714 FDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLS 773

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
            S    E +H +       G++  +   GA+V++  + G + EA      M +   + ++
Sbjct: 774 ASPSASESLHGYAV---KIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLW 829

Query: 614 GAMLGA 619
             M+ A
Sbjct: 830 NVMMKA 835


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/757 (35%), Positives = 438/757 (57%), Gaps = 5/757 (0%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           ++L  +IKSGL         L+S+F   +S+ +A+ VF+ + ++    +++++       
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
             + ++ +  +MRY          + LL VCG    +R G+ +HG ++ +G   ++    
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++MY++ G+ E+A  +F +M ERDL+SWN+++A    NG    AL+L+  M +  +  
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           +++T  + L A  N+ +L+I   VH + +  G    + +  ALV MY K G +  A+ V 
Sbjct: 361 NYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL- 356
             M  R+ V+WN++I  + +   P  A+  F  + ++GV    +TI+  L A     DL 
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
           + G+ +H  +       +  + +SLI+MY++C  ++ +  IF  L  K   +WNA++   
Sbjct: 478 DHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSAN 537

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           A  G   EAL    KMR+  I  D F+       +  L+++   + +H+L+I+  FE N 
Sbjct: 538 AHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESND 597

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           +V+ A +DMY KCG +     +      R   +WN++I     HG  + A E F++ML+ 
Sbjct: 598 YVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDL 657

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             +P+ +TF+  +SACSH GLV+EG+ YF+S+   +G+   ++H   ++DLLGRAG+L E
Sbjct: 658 GLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTE 717

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A +FI KMP+ P   V+ ++L ACKIH N+EL  KAA+RLFELD  +   +VL +N+ A+
Sbjct: 718 AENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCAS 777

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
              W  +  VR  ME   ++K P CS V+LKN+V +F  G   HPQ+  IY  LE L   
Sbjct: 778 TRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKI 837

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           I+ AGY+PDT+ S+ D ++  +E+ L +HSE++A+AFGL+NSS GS + I KNLRVCGDC
Sbjct: 838 IREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDC 897

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H+  K +S + GR+II+RD +RFH F +G CSC DYW
Sbjct: 898 HSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 308/599 (51%), Gaps = 12/599 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +IK GL       T L+  +  +  +++   VF+ I +     + +++ GYA    + + 
Sbjct: 85  VIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEV 144

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +S   R+R D V         +++ CG + +   G ++ G +I +G    +     +++M
Sbjct: 145 MSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISM 204

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           +  C  IEEA  +FD M ERD +SWN+I+     NG  E +L+  ++M     + D+ITI
Sbjct: 205 FGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITI 264

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            ++LP   +  +LR G+ +HG  +++G +S V V  +L+ MY++ G+ E A  VF  M+ 
Sbjct: 265 SALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRE 324

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R+++SWNSM+A++V+ GN   A+ +  +ML        VT   AL AC +L  L+    V
Sbjct: 325 RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK---IV 381

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  +  L L  ++ + N+L++MY K   +  A  +   +  +  V+WNA+I G+A N   
Sbjct: 382 HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEP 441

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           N A+  F  +R + +  +  T+V+++ A L+   ++ +   IHA ++ + FE   FV ++
Sbjct: 442 NAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSS 501

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           LI MYA+CG + T+  +FD++  ++ +TWN ++     +G G+ A++L  KM       +
Sbjct: 502 LITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLD 561

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             +F  A +   +  L++EG     SL   +G E       A +D+ G+ G +++ +  +
Sbjct: 562 QFSFSVAHAIIGNLTLLDEG-QQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRIL 620

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD--PDEGGYHVLLANIYAAAS 658
            + P       +  ++ A   H   +   +A + + +L   PD    HV   ++ +A S
Sbjct: 621 PQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPD----HVTFVSLLSACS 674



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 240/472 (50%), Gaps = 4/472 (0%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K+ S+  A  VF+ +P++ +A ++ ++ G+ +      A+ F   M    V P  Y 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 141 YTYLLKVCGDVGEIRRGK-EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
              L+  C   G +  G  ++H  +I  G + D+F  T +++ Y   G + E   +F  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            E ++VSW +++ G+A NG  +  + +  R+  +G   +   + +++ +   +    +G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            V G  +++G D+ V+V+ +L+ M+  C  +E A  VFD MK R+ +SWNS+I A V  G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           + E+++  F +M     +   +TI   L  C    +L  G  +H ++ +  L ++V + N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL+SMYS+  K + A  +F K++ + L+SWN+M+  +  NG    AL    +M       
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T  + + A   L  +   K +HA VI      N+ +  AL+ MY K G++  A+ + 
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
            +M +R   TWN +I G+  +    AA+E FN + E     N IT +  +SA
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 231/458 (50%), Gaps = 6/458 (1%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY+K G IE A  +FD+MPER+  SWN +++GF + G+ + A+     M E G R     
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 242 IVSILPAVANVGSLRIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
             S++ A    G +  G   VH + ++ G    V V T+L+  Y   G V    +VF  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           +  N+VSW S++  Y   G  +E M +++++   GV      +   + +C  L D   G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            V   + +  L T VS+ NSLISM+  C  ++ A+ +F  ++ +  +SWN++I     NG
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              ++L YF +MR  + K D  T+ +++P       +R+ + +H +V++S  E NV V  
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +L+ MY++ G    A  +F  M ER + +WN M+  +  +G    A+EL  +ML+     
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TF  A+SAC +   ++  +H F  L    G+   +    A+V + G+ G +  A   
Sbjct: 361 NYVTFTTALSACYNLETLKI-VHAFVIL---LGLHHNLIIGNALVTMYGKFGSMAAAQRV 416

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            + MP    +T + A++G    +K      +A N L E
Sbjct: 417 CKIMPDRDEVT-WNALIGGHADNKEPNAAIEAFNLLRE 453



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 180/360 (50%), Gaps = 8/360 (2%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L  C +L+ L+ +   +I  GL    +    LV+++ K+ S++ A RV + +PD+ +  +
Sbjct: 369 LSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE----IRRGKEIHG 162
           + ++ G+A     + A+     +R + V PV  NY  ++ +          +  G  IH 
Sbjct: 429 NALIGGHADNKEPNAAIEAFNLLREEGV-PV--NYITIVNLLSAFLSPDDLLDHGMPIHA 485

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++V GF L+ F  + ++ MYA+CG +  +  +FD +  ++  +WN I++  A  G  E 
Sbjct: 486 HIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L+ +M  +G   D  +       + N+  L  G+ +H   ++ GF+S   V  A +D
Sbjct: 546 ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMD 605

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG ++    +    +SR+  SWN +I+A    G  ++A   F +MLD G+ P +VT
Sbjct: 606 MYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVT 665

Query: 343 IMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +  L AC+  G ++ G+ +   +  +  + T +     +I +  +  K+  A +  +K+
Sbjct: 666 FVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKM 725


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/733 (37%), Positives = 405/733 (55%), Gaps = 71/733 (9%)

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
              + + ++ H  ++  G   D    T +++ YA      +A  + D +PE ++ S++T+
Sbjct: 26  TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +  F++      AL   ++M   G   D   + S + A A + +L+  + VHG A  +GF
Sbjct: 86  IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DS   V ++LV MY KC ++  A  VFD M   +VVSW++++AAY   G  +EA R+F +
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205

Query: 331 MLDQGV-----------------------------------EPTNVTIMEALHACADLGD 355
           M D GV                                   EP   TI   L A  DL D
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-------------- 401
           L  GI +H  + +  L +D  ++++LI MY KC      + +F ++              
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325

Query: 402 -------------------QGKTL--VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
                              QG  L  VSW +MI   +QNGR  EAL  F +M+   +KP+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S T+  ++PA   ++ + + K  H   +R     +V+V +ALIDMYAKCG +  +R  FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            +  +++  WN +I GY  HG  K A+E+F+ M     KP+ I+F C +SACS SGL EE
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G +YF S+   YGIE  ++HY  MV LL RAG+L +A+  I++MP+ P   V+GA+L +C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++H NV LGE AA +LFEL+P   G ++LL+NIYA+  MW+++ +VR +M+ KGL+K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
           CS +E+KN+VH   +G   HPQ  +I   L+ L  E+K  GY P+ N +  DVE+  +E 
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQ 685

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
           +L  HSEKLA+ FGLLN+ PG  + + KNLR+CGDCH   K+IS    REI VRD +RFH
Sbjct: 686 ILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFH 745

Query: 800 CFKNGVCSCGDYW 812
            FK G CSCGDYW
Sbjct: 746 HFKEGACSCGDYW 758



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 267/577 (46%), Gaps = 79/577 (13%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            SL + R+    I+K+GL +     TKL+S +      +DA  V + +P+     + T++
Sbjct: 27  ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             ++KF     A+S   +M    + P        +K C  +  ++  +++HG   V+GF 
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG--------FAEL 222
            D F  + +V+MY KC QI +A+++FDRM E D+VSW+ +VA +A+ G        F+E+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 223 ---------------------------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
                                      A+ +   MH  G   D  TI S+LPAV ++  L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---------------------------- 287
            +G  +HGY ++ G  S   VS+AL+DMY KC                            
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 288 ---GRVETARLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
              G+VE++  +F  +K +    NVVSW SMIA   + G   EA+ +F++M   GV+P +
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNS 386

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VTI   L AC ++  L  G   H    +  + TDV + ++LI MY+KC ++  +   F  
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K LV WNA+I GYA +G+  EA+  F  M+    KPD  +   V+ A ++  +    
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 461 K-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYG 518
             + +++  +   E  V     ++ + ++ G +  A A+   M        W  ++    
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCR 566

Query: 519 TH---GLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
            H    LG+ A E   K+ E  P+ P +   L  I A
Sbjct: 567 VHNNVSLGEVAAE---KLFELEPSNPGNYILLSNIYA 600



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 194/467 (41%), Gaps = 80/467 (17%)

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           +   SL   +  H + ++ G  +  +++T L+  YA       A LV D +   NV S++
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           ++I A+ +      A+  F +ML +G+ P N  +  A+ ACA L  L+    VH +    
Sbjct: 84  TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-----------------QG--------- 403
              +D  + +SL+ MY KC ++  A  +F ++                 QG         
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203

Query: 404 ---------KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
                      L+SWN MI G+  +G  +EA+  F  M  +  +PD  T+ SV+PA+ +L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN----------- 503
             +     IH  VI+     +  V +ALIDMY KC        +FD M+           
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323

Query: 504 ------------------------ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
                                   E +V +W  MI     +G    A+ELF +M     K
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVK 383

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           PN +T  C + AC +   +  G   H F SL++  GI   +    A++D+  + GR+  +
Sbjct: 384 PNSVTIPCLLPACGNIAALMHGKAAHCF-SLRR--GISTDVYVGSALIDMYAKCGRIQAS 440

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
                 +P +  +  + A++    +H       K A  +F+L    G
Sbjct: 441 RICFDGIPTK-NLVCWNAVIAGYAMHGKA----KEAMEIFDLMQRSG 482


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/656 (39%), Positives = 398/656 (60%), Gaps = 1/656 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K IH  L+  G   D + +  V+      G    ++++ D+  E ++  +NT++ G   N
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + ++++   M +EG   D  T   +L A A V    +G  +H   ++AG ++   V 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +L+++Y KCG ++ A  VFD +  +N  SW + I+ YV  G   EA+ +F+++L+ G+ 
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P + +++E L AC   GDL  G ++ + + +  +  +V +  +L+  Y KC  ++RA  +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  K +VSW++MI GYA NG   EAL+ F KM ++ +KPD + MV V+ + A L  +
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGAL 326

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
               W   L+  + F  N  + TALIDMYAKCG +  A  +F  M ++    WN  I G 
Sbjct: 327 ELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGL 386

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
              G  K A+ LF +M +   KP+  TF+  + AC+H+GLVEEG  YF S++  + + P 
Sbjct: 387 AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPE 446

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG MVDLLGRAG L+EA   I+ MP+E    V+GA+LG C++H++ +L E    +L 
Sbjct: 447 IEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLI 506

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
            L+P   G +VLL+NIYAA+  W++ AK+R+IM ++G++K PG S +E+   VH F  G 
Sbjct: 507 ALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGD 566

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
           T HP S++IY  L  L  ++KAAGYVP T+ +  D+E+  +E+ +  HSEKLA+AFGL++
Sbjct: 567 TSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLIS 626

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++P   I + KNLRVCGDCH A K+IS + GREIIVRD +RFHCF +G+CSC DYW
Sbjct: 627 TAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 261/512 (50%), Gaps = 3/512 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L++  + LK L+ I   +++ GL +      K++     + + + + R+ +   +    L
Sbjct: 16  LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFL 75

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++TM++G        +++     MR + ++P  + + ++LK C  V +   G ++H  ++
Sbjct: 76  FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G   D F    ++N+Y KCG I+ A+K+FD +P+++  SW   ++G+   G    A+D
Sbjct: 136 KAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +  R+ E G R D  ++V +L A    G LR G+ +  Y    G    V V+TALVD Y 
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG +E AR VFDGM  +N+VSW+SMI  Y   G P+EA+ +F KML++G++P    ++ 
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L +CA LG LE G +   L++  +   +  +  +LI MY+KC ++DRA ++F  ++ K 
Sbjct: 316 VLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKD 375

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIH 464
            V WNA I G A +G V +AL  F +M    IKPD  T V ++ A     ++    ++ +
Sbjct: 376 RVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFN 435

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLG 523
           ++         +     ++D+  + G +  A  L   M  E +   W  ++ G   H   
Sbjct: 436 SMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDT 495

Query: 524 KAAVELFNKMLE-GPTKPNDITFLCAISACSH 554
           +    +  K++   P    +   L  I A SH
Sbjct: 496 QLVEVVLKKLIALEPWHSGNYVLLSNIYAASH 527


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/755 (35%), Positives = 442/755 (58%), Gaps = 6/755 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP-DKLD-ALYHTMLKGYAKFASL 119
           L +K GL    L    L+ ++ K   L  A RVFE +  D  D A +++++ G  +    
Sbjct: 189 LAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
            +A++    M+        Y    +L+VC ++G +  G+E+H  L+  G  L++     +
Sbjct: 249 LEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI-QCNAL 307

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           + MYAK G+++ A ++F ++ E+D +SWN++++ + QN F   A+D    M + G + D 
Sbjct: 308 LVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDH 367

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
             +VS+  A+ ++  L  G+  H YA++    + + V   L+DMY KCG +E +  VF+ 
Sbjct: 368 ACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFES 427

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  R+ +SW +++A + +     EA+ +  ++  +G+   ++ I   L  C  L  +   
Sbjct: 428 MGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLL 487

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH    +  L  D+ + N LI +Y +C + D + ++F +++ K +VSW +MI     N
Sbjct: 488 KQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR+N A+  F +M+  NI+PDS  +VS++ A+A LS +   K +H  +IR  F     V+
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV 606

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           ++L+DMY+ CG++  A  +F+    + V  W  MI+  G HG GK A++LF +ML+    
Sbjct: 607 SSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLT 666

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ ++FL  + ACSHS LVEEG HY   +   Y ++P  +HY  +VD+LGR+G+  EA++
Sbjct: 667 PDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYE 726

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI+ MP++P   V+ A+LGAC++H+N  L   AAN+L EL+PD  G ++L++N++A    
Sbjct: 727 FIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGK 786

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI-K 718
           W+   + RT M ++GL+K P CS +E+ N +H+F SG   H  S+ I+  L  + + + +
Sbjct: 787 WNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRR 846

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GYV DT  + HD  +  + ++L  HSE++AIAFGL+++ PG  I I KNLRVCGDCH 
Sbjct: 847 EGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHE 906

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TK +S +  R+I+VRD +RFH F  G CSC D+W
Sbjct: 907 FTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 294/592 (49%), Gaps = 19/592 (3%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D     TKLV ++ +   + DA R+F  +P +    ++ ++  Y    S  +A+     M
Sbjct: 93  DDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAM 152

Query: 130 RYDDV---APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           R       AP       +LK CG  G+ R G E+HG  +  G          ++ MYAKC
Sbjct: 153 RASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC 212

Query: 187 GQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           G ++ A ++F+ + +  RD+ SWN++V+G  QNG    AL L   M   G   +  T V+
Sbjct: 213 GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVA 272

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS-TALVDMYAKCGRVETARLVFDGMKSR 303
           +L   A +G L +G+ +H   ++ G  S +N+   AL+ MYAK GRV++A  VF  +  +
Sbjct: 273 VLQVCAELGLLSLGRELHAALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQIAEK 330

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           + +SWNSM++ YV+     EA+  F +ML  G +P +  ++    A   L  L  G   H
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
               + +L TD+ + N+L+ MY KC  ++ +A +F  +  +  +SW  ++  +AQ+ R +
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EAL    +++ + I  DS  + S++     L  I   K +H   IR+    ++ +   LI
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLI 509

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           D+Y +CG    +  LF  + ++ + +W  MI+    +G    AV LF +M +   +P+ +
Sbjct: 510 DIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSV 569

Query: 544 TFLCAISACSHSGLVEEG--IHYFTSLKKDYGIE-PVMDHYGAMVDLLGRAGRLNEAWDF 600
             +  + A +    + +G  +H F  +++++ IE PV+    ++VD+    G +N A   
Sbjct: 570 ALVSILVAIAGLSSLTKGKQVHGFL-IRRNFPIEGPVVS---SLVDMYSGCGSMNYAIRV 625

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLL 650
            ++   +  + ++ AM+ A  +H + +       R+ +  L PD   +  LL
Sbjct: 626 FERAKCKD-VVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 256/511 (50%), Gaps = 30/511 (5%)

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL----DLFAMTGVVNM 182
           +R       P   +Y ++L +         G+++H   +  G SL    D F  T +V M
Sbjct: 46  LRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTG-SLNEDDDGFLATKLVFM 104

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG---DF 239
           Y +CG++++A ++F+ MP R + SWN +V  +  +G A  A+ +   M      G   D 
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
            T+ S+L A    G  R G  VHG A++ G D    V+ AL+ MYAKCG +++A  VF+ 
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224

Query: 300 MK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           ++  +R+V SWNS+++  V+ G   EA+ +F+ M   G    + T +  L  CA+LG L 
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLS 284

Query: 358 RGIFVHKLLDQLKLGTDVSMT-NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            G  +H  L  LK G+++++  N+L+ MY+K  +VD A  +F ++  K  +SWN+M+  Y
Sbjct: 285 LGRELHAAL--LKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCY 342

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QN    EA+++F +M     +PD   +VS+  AL  LS +   +  HA  I+     ++
Sbjct: 343 VQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDL 402

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V   L+DMY KCG++  +  +F+ M  R   +W  ++  +        A+E+  ++ + 
Sbjct: 403 QVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKE 462

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG-------IEPVMDHYGAMVDLLG 589
               + +     +  C        G+   + LK+ +        ++ ++++   ++D+ G
Sbjct: 463 GIMVDSMMIGSILETCC-------GLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYG 513

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
             G  + + +  Q++  +  I  + +M+  C
Sbjct: 514 ECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/694 (37%), Positives = 408/694 (58%), Gaps = 38/694 (5%)

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           + K++H Q I    SL   + + V+++Y     + EA  +F  +    +++W +++  F 
Sbjct: 23  QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                  AL     M   GR  D     S+L +   +  LR G++VHG+ +R G D  + 
Sbjct: 82  DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 276 VSTALVDMYAK---------CGRV---------------------------ETARLVFDG 299
              AL++MYAK          G V                           ++ R VF+ 
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  ++VVS+N++IA Y + G  E+A+R+ ++M    ++P + T+   L   ++  D+ +G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  + +  + +DV + +SL+ MY+K  +++ +  +FS+L  +  +SWN+++ GY QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR NEAL  F +M +  +KP +    SVIPA A L+ +   K +H  V+R  F  N+F+ 
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +AL+DMY+KCG +  AR +FD MN     +W  +I G+  HG G  AV LF +M     K
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN + F+  ++ACSH GLV+E   YF S+ K YG+   ++HY A+ DLLGRAG+L EA++
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI KM +EP  +V+  +L +C +HKN+EL EK A ++F +D +  G +VL+ N+YA+   
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W ++AK+R  M KKGL+K P CS +E+KN+ H F SG   HP   +I  FL+ ++++++ 
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYV DT+ + HDV++  +  LL  HSE+LA+AFG++N+ PG+TI + KN+R+C DCH A
Sbjct: 622 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K+IS +T REIIVRD  RFH F  G CSCGDYW
Sbjct: 682 IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 243/487 (49%), Gaps = 38/487 (7%)

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           H   + ++S++     L +A  +F+ +       + ++++ +   +    A++  + MR 
Sbjct: 39  HTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA 98

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK------ 185
               P    +  +LK C  + ++R G+ +HG ++  G   DL+    ++NMYAK      
Sbjct: 99  SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158

Query: 186 ---CGQ---------------------------IEEAYKMFDRMPERDLVSWNTIVAGFA 215
               G                            I+   ++F+ MP +D+VS+NTI+AG+A
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           Q+G  E AL +V  M     + D  T+ S+LP  +    +  GK +HGY +R G DS V 
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + ++LVDMYAK  R+E +  VF  +  R+ +SWNS++A YV+ G   EA+R+F++M+   
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 338

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V+P  V     + ACA L  L  G  +H  + +   G+++ + ++L+ MYSKC  +  A 
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            IF ++     VSW A+I+G+A +G  +EA++ F +M+ + +KP+    V+V+ A + + 
Sbjct: 399 KIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458

Query: 456 VIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVM 513
           ++  A  + +++       + +    A+ D+  + G +  A      M  E   + W+ +
Sbjct: 459 LVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518

Query: 514 IDGYGTH 520
           +     H
Sbjct: 519 LSSCSVH 525



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 136/278 (48%), Gaps = 2/278 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           + I   +I+ G+       + LV ++ K   + D+ RVF  +  +    +++++ GY + 
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              ++A+    +M    V P    ++ ++  C  +  +  GK++HG ++  GF  ++F  
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +V+MY+KCG I+ A K+FDRM   D VSW  I+ G A +G    A+ L   M  +G +
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARL 295
            + +  V++L A ++VG +           +  G +  +    A+ D+  + G++E A  
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501

Query: 296 VFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKML 332
               M      S W++++++     N E A ++ +K+ 
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/572 (44%), Positives = 370/572 (64%), Gaps = 4/572 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++L    ++  L  GK +H   + + F   + +   L+++YAKCG +  AR +FD M SR
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLERGIF 361
           +VV+W ++I  Y +   P++A+ +  +ML  G++P   T+   L A + +G  D+ +G  
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H L  +    ++V ++ +++ MY++C  ++ A  IF  +  K  VSWNA+I GYA+ G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            ++A   F  M  +N+KP  FT  SV+ A A +  +   KW+HAL+I+   +   FV   
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMYAK G++  A+ +FD + +R V +WN M+ GY  HGLGK A++ F +ML     PN
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           DITFLC ++ACSH+GL++EG HYF  +KK Y +EP + HY  MVDLLGRAG L+ A  FI
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
            +MPI+P   V+GA+LGAC++HKN+ELG  AA  +FELD    G HVLL NIYA A  W+
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
             AKVR +M++ G++K P CS VE++NEVH F +    HPQ + I+   E + D+IK  G
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498

Query: 722 YVPDTNSIHDVEDYVQ-ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           YVPD++ +    D  + E  L  HSEKLA+AF LLN+ PGSTI I+KN+R+CGDCH+A K
Sbjct: 499 YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++S +  REIIVRD +RFH F +G CSC DYW
Sbjct: 559 FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 198/374 (52%), Gaps = 6/374 (1%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ CT L +L     I  L++ S   D  + Q  L++L+ K   L  A ++F+ +  + 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG--EIRRGKEI 160
              +  ++ GY++     DA+  L  M    + P  +    LLK    VG  ++ +G+++
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG  +  G+  +++    +++MYA+C  +EEA  +FD M  ++ VSWN ++AG+A+ G  
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + A  L + M  E  +    T  S+L A A++GSL  GK VH   ++ G   +  V   L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAK G +E A+ VFD +  R+VVSWNSM+  Y + G  + A++ F++ML   + P +
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T +  L AC+  G L+ G     ++ +  +   +S   +++ +  +   +DRA    S+
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISE 380

Query: 401 LQGK-TLVSWNAMI 413
           +  K T   W A++
Sbjct: 381 MPIKPTAAVWGALL 394


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 431/740 (58%), Gaps = 4/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T+ +S + +   + +A  +FE +      +++ M++G+       DAV F  RM +  V 
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              + Y +++K CG + ++  G+ +HG++I +G  LD++    ++ MYAK G IE A  +
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  MP RDLVSWN++++G+   G    +L     M   G + D  +++ IL A +  G L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R GK +H   MR+  +  V V T+LVDMYAKCGR++ A  +FD +  +++V+WN+MI  Y
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGY 303

Query: 316 VEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
                  E+    +KM + G + P  +T++  L  CA L  +  G  VH    +      
Sbjct: 304 SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPH 363

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + +  +L+ MY +C K+  A  +F ++  + L+SWNAMI  Y +NG   +A+  F  + +
Sbjct: 364 LVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCN 423

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           K +KPD+ T+ S++PA AEL+ +R A+ IH  V +   + N FV  +++ MY KCG +  
Sbjct: 424 KTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLR 483

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +FD M  + V +WN +I  Y  HG G+ ++ELF++M E   +PN  TF+  + +CS 
Sbjct: 484 AREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSV 543

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GLV EG  YF S+K+DY I P ++HYG ++DL+GR G L+ A +FI++MP+ P   ++G
Sbjct: 544 AGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWG 603

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           ++L A +   +VEL E AA  +  L+ D  G +VLL+N+YA A  W+ + +++  M+K+G
Sbjct: 604 SLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEG 663

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH--DV 732
           L+K+ GCS+V+L ++   F +      +   +Y  L+ +  +I    YV         D+
Sbjct: 664 LEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDL 723

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E   + N   SHS +LAI FGL++++ G+ + +RKN+R+C  CH   K IS  T REIIV
Sbjct: 724 EKK-RANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIV 782

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD   FH F  G CSCGDYW
Sbjct: 783 RDSKIFHHFNGGHCSCGDYW 802



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 237/408 (58%), Gaps = 4/408 (0%)

Query: 45  LLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
            +++ C  L +L    R+   +IKSGL         L+ ++ K   +  A  VF  +P +
Sbjct: 131 FVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVR 190

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +++M+ GY        ++S    M+   +    ++   +L  C   G +R GKEIH
Sbjct: 191 DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIH 250

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            Q++ +   LD+   T +V+MYAKCG+++ A ++FD++ ++ +V+WN ++ G++ N  + 
Sbjct: 251 CQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSF 310

Query: 222 LALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
            +   V +M E G+   D+IT++++LP  A + ++ +GK+VHG+A+R GF   + + TAL
Sbjct: 311 ESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETAL 370

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMY +CG+++ A  +F  M  RN++SWN+MIA+Y + G   +AM +FQ + ++ ++P  
Sbjct: 371 VDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDA 430

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            TI   L A A+L  L     +H  + +LKL ++  ++NS++ MY KC  + RA +IF +
Sbjct: 431 TTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDR 490

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           +  K ++SWN +I+ YA +G    ++  F +MR K  +P+  T VS++
Sbjct: 491 MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLL 538



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/472 (31%), Positives = 251/472 (53%), Gaps = 13/472 (2%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           ++T  ++ Y + G ++ A  +F+ M + D   WN ++ GF  NG    A+D   RM   G
Sbjct: 62  SLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGG 121

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            RGD  T   ++ A   +  L  G+ VHG  +++G D  + +  +L+ MYAK G +E+A 
Sbjct: 122 VRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAE 181

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           +VF  M  R++VSWNSMI+ YV  G+   ++  F++M   G++    +++  L AC+  G
Sbjct: 182 MVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEG 241

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            L  G  +H  + + +L  DV +  SL+ MY+KC ++D A  +F ++  K++V+WNAMI 
Sbjct: 242 FLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIG 301

Query: 415 GYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           GY+ N +  E+  Y  KM+    + PD  TM++++P  A+L  I   K +H   IR+ F 
Sbjct: 302 GYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            ++ + TAL+DMY +CG +  A  LF  MNER++ +WN MI  Y  +G  + A+ LF  +
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEG--IH-YFTSLKKDYGIEPVMDHYGAMVDLLGR 590
                KP+  T    + A +    + E   IH Y T LK D           ++V + G+
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS----NSIVFMYGK 477

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK----NVELGEKAANRLFE 638
            G L  A +   +M  +  I+ +  ++ A  IH     ++EL  +   + FE
Sbjct: 478 CGNLLRAREIFDRMTFKDVIS-WNTVIMAYAIHGFGRISIELFSEMREKGFE 528



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 132/293 (45%), Gaps = 9/293 (3%)

Query: 41  HPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           HP  +    LL  C  L+ +   + +    I++G     + +T LV ++ +   L  A  
Sbjct: 326 HPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAEC 385

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F  + ++    ++ M+  Y K      A++    +    + P       +L    ++  
Sbjct: 386 LFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELAS 445

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R  ++IHG +       + F    +V MY KCG +  A ++FDRM  +D++SWNT++  
Sbjct: 446 LREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMA 505

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDS 272
           +A +GF  ++++L + M E+G   +  T VS+L + +  G +  G        R    + 
Sbjct: 506 YAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINP 565

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEA 324
            +     ++D+  + G ++ A+   + M  +     W S++ A    G+ E A
Sbjct: 566 GIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELA 618



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E+N   +T  +  Y + G +  A  LF+ M +     WNVMI G+  +GL   AV+ +++
Sbjct: 57  ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116

Query: 533 MLEGPTKPNDITFLCAISAC 552
           M  G  + ++ T+   I AC
Sbjct: 117 MEFGGVRGDNFTYPFVIKAC 136


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 305/828 (36%), Positives = 453/828 (54%), Gaps = 75/828 (9%)

Query: 41  HPSALLLEVCTSLKELRRI-LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP-- 97
           H S +  + C +L + + +    II   L + +   T L+  +   NS+++A  + E   
Sbjct: 25  HSSTISKQQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNV 84

Query: 98  IPDKLDALYHTMLKGYA-KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            P      +   L  +A  F S + A+    RM+     P  Y + ++ K CG++     
Sbjct: 85  TPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFEL 144

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAG 213
           G  IHG +I  GF  ++F    V++MY KC  +  A K+FD +  R   D V+WN+IV+ 
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSV 204

Query: 214 FAQNGFAELALDLVTRMH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           ++      +A+ L   M    G   D + +V+ILP    +G    G+ VHG+ +R+G   
Sbjct: 205 YSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVE 264

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V V  ALVDMYAKCG++E A  VF+ M+ ++VV+WN+M+  Y + G  E+A+ +F KM 
Sbjct: 265 DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR 324

Query: 333 DQGVE-----------------------------------PTNVTIMEALHACADLGDLE 357
           ++ +E                                   P  VT+M  L ACA +G L 
Sbjct: 325 EEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALL 384

Query: 358 RGIFVHKLLDQLKL-------GTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVS 408
            G   H    +  L         D+++ N+LI MY+KCK ++ A  +F ++  + + +V+
Sbjct: 385 HGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVT 444

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKN--IKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           W  MI GYAQ+G  N AL  F +M   +  I P+ FT+  V+ A A L+ +++ K IHA 
Sbjct: 445 WTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAY 504

Query: 467 VIR-SCFEKNV-FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           V+R S  + +V FV   LIDMY+K G V TA+ +FD M++R+  +W  ++ GYG HG  +
Sbjct: 505 VLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSE 564

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A  +F++M +     + ITFL  + ACSHSG+             D+G++P ++HY  M
Sbjct: 565 DAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACM 611

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGRAGRL EA   I  MPIEP   V+ A+L AC+IH N EL E AA +L EL  D  
Sbjct: 612 VDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADND 671

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           G + LL+NIYA A  W  +A++  +M++ G++K PG S V+ +  + +FY G   H QS+
Sbjct: 672 GTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQ 731

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           +IY  L  LI  IKA        S+HDV+D  + + LS HSEKLA+A+ +L   PG+ I 
Sbjct: 732 KIYETLADLIKRIKA------NFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIR 785

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLR+CGD H+A  YIS++   EII+RD  RFH FKNG CSC  YW
Sbjct: 786 ITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 280/686 (40%), Positives = 405/686 (59%), Gaps = 20/686 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL-FAMTGVVNMYAKCGQIEEAYKMFD-- 197
           Y +LL+ C  +  +   K IH  L   GF L     +  ++ +Y+K G +  A  +FD  
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 198 --------RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
                   + P   L   NT++  +A  G +  A+DL   M   G   +  T   +L   
Sbjct: 85  HHHHHGHTQAPNSFLC--NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC 142

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A+      G+ VHG  +R GF S + V  ALVDMYAKCG +  A  VFD M  R+VV W 
Sbjct: 143 ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWT 202

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +MI  Y +   P +A+ +F+KM ++G     +T +    A   LGD    I VH      
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLN 262

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               DVS+ NS++ MY+KC  V+RA  +F +++ +  +SWN+M+ GY QNGR  +AL+ F
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 322

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M++    P+  T + ++ A + L      + +H  VI S  + +  +  A++DMY KC
Sbjct: 323 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 382

Query: 490 GAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           G + TA  +F+   + ER V++WNV+I GYG HG GK A+ELF++M     +PNDITF  
Sbjct: 383 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 442

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH+GL++EG   F  + K   + P M HY  MVD+LGRAG LNEA+  I+K+P  
Sbjct: 443 ILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   V+GA+L AC+IH N ELGE AAN LF+L+P+  GY+VL++NIYAA++ W ++  VR
Sbjct: 502 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 561

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+ +GL+K    S++E   EVH F++     P  + +Y  +E+L  E+K  GYVPD +
Sbjct: 562 QNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 621

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HDVE   +E+LL+ HSEKLA+AFG++    G  I + KNLRVC DCH A K+IS + 
Sbjct: 622 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 681

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GR+IIVRD +RFH F+ G CSCGDYW
Sbjct: 682 GRKIIVRDGNRFHHFQGGRCSCGDYW 707


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/774 (35%), Positives = 441/774 (56%), Gaps = 8/774 (1%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP-DK 101
           +L+ C +L E R    I  + +K G  +       L++++ K   L  A  +F+ I  +K
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 102 LDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            D + +++++  +    +  +A+S   RM+   VA   Y +   L+   D   ++ G  I
Sbjct: 211 EDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG ++ +    D++    ++ MYAKCG++E+A ++F+ M  RD VSWNT+++G  QN   
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL+    M   G++ D +++++++ A    G+L  GK VH YA+R G DS + +   L
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMYAKC  V+     F+ M  ++++SW ++IA Y +     EA+ +F+K+  +G++   
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDP 450

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           + I   L AC+ L        +H  + +  L  D+ + N+++++Y +   +D A   F  
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFES 509

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K +VSW +MI     NG   EAL  F  ++  NI+PDS  ++S + A A LS ++  
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +IR  F     + ++L+DMYA CG V  +R +F  + +R +  W  MI+  G H
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G  A+ LF KM +    P+ ITFL  + ACSHSGL+ EG  +F  +K  Y +EP  +H
Sbjct: 630 GCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEH 689

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVDLL R+  L EA+ F++ MPI+P   ++ A+LGAC IH N ELGE AA  L + D
Sbjct: 690 YACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSD 749

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
            +  G + L++NI+AA   W+ + +VR  M+  GL+K PGCS +E+ N++H+F +    H
Sbjct: 750 TENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSH 809

Query: 701 PQSKRIYTFLETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           PQ+  IY  L      + K  GY+  T  + H+V +  +  +L  HSE+LA+ +GLL + 
Sbjct: 810 PQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTP 869

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            G+ I I KNLR+C DCH   K  S V+ R ++VRD +RFH F+ G+CSCGD+W
Sbjct: 870 KGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 174/597 (29%), Positives = 310/597 (51%), Gaps = 17/597 (2%)

Query: 35  PSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           PSR+  H  +LLL++C + K L   +++  L++KS L       TKLV ++ K  SL DA
Sbjct: 42  PSRL-EHAHSLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDA 98

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ + ++    ++ ++  +       +A+     MR   VA     +  +LK CG +
Sbjct: 99  VKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGAL 158

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNT 209
           GE R G EIHG  +  G+   +F    ++ MY KCG +  A  +FD   M + D VSWN+
Sbjct: 159 GESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNS 218

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           I++     G    AL L  RM E G   +  T V+ L  V +   +++G  +HG  +++ 
Sbjct: 219 IISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSN 278

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
             + V V+ AL+ MYAKCGR+E A  VF+ M  R+ VSWN++++  V+     +A+  F+
Sbjct: 279 HFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFR 338

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            M + G +P  V+++  + A    G+L +G  VH    +  L +++ + N+L+ MY+KC 
Sbjct: 339 DMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCC 398

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            V      F  +  K L+SW  +I GYAQN    EA+N F K++ K +  D   + SV+ 
Sbjct: 399 CVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLR 458

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A + L    + + IH  V +     ++ +  A++++Y + G +  AR  F+ +  + + +
Sbjct: 459 ACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVS 517

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTS 567
           W  MI     +GL   A+ELF  + +   +P+ I  + A+SA ++   +++G  IH F  
Sbjct: 518 WTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFL- 576

Query: 568 LKKDYGIE-PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           ++K + +E P+     ++VD+    G +  +      +  +  + ++ +M+ A  +H
Sbjct: 577 IRKGFFLEGPIAS---SLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMH 629


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/771 (34%), Positives = 431/771 (55%), Gaps = 4/771 (0%)

Query: 46   LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L  C  ++ L    ++  L++K G          LVSL+    SL  A  +F  +  + 
Sbjct: 277  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
               Y+T++ G ++    + A+    RM+ D + P       L+  C   G +  G+++H 
Sbjct: 337  AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                 GF+ +      ++N+YAKC  IE A   F      ++V WN ++  +        
Sbjct: 397  YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            +  +  +M  E    +  T  SIL     +G L +G+ +H   ++  F     V + L+D
Sbjct: 457  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLID 516

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MYAK G+++TA  +      ++VVSW +MIA Y +    ++A+  F++MLD+G+    V 
Sbjct: 517  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576

Query: 343  IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  A+ ACA L  L+ G  +H         +D+   N+L+++YSKC  ++ A   F + +
Sbjct: 577  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636

Query: 403  GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
                ++WNA++ G+ Q+G   EAL  F +M  + I  ++FT  S + A +E + ++  K 
Sbjct: 637  AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +HA++ ++ ++    V  A+I MYAKCG++  A+  F  ++ ++  +WN MI+ Y  HG 
Sbjct: 697  VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGF 756

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            G  A++ F++M+    +PN +T +  +SACSH GLV++GI YF S+  +YG+ P  +HY 
Sbjct: 757  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYV 816

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             +VD+L RAG L+ A DFI +MPIEP   V+  +L AC +HKN+E+GE AA+ L EL+P+
Sbjct: 817  CVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 876

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
            +   +VLL+N+YA    WD     R  M++KG++K PG S +E+KN +HSFY G   HP 
Sbjct: 877  DSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 936

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            +  I+ + + L       GYV D  S + +++   ++  +  HSEKLAI+FGLL+     
Sbjct: 937  ADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATM 996

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I++ KNLRVC DCH+  K++S V+ REIIVRD +RFH F+ G CSC DYW
Sbjct: 997  PINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/582 (27%), Positives = 286/582 (49%), Gaps = 6/582 (1%)

Query: 46  LLEVC----TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +LE C     +   + +I   II  GL    +    L+ L+ +   +  A RVF+ +  K
Sbjct: 175 VLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK 234

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
             + +  M+ G +K     +A+     M    + P  Y ++ +L  C  +  +  G+++H
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 294

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G ++  GFS D +    +V++Y   G +  A  +F  M +RD V++NT++ G +Q G+ E
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 354

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A++L  RM  +G   D  T+ S++ A ++ G+L  G+ +H Y  + GF S   +  AL+
Sbjct: 355 KAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALL 414

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++YAKC  +ETA   F   +  NVV WN M+ AY    +   + RIF++M  + + P   
Sbjct: 415 NLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 474

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L  C  LGDLE G  +H  + +     +  + + LI MY+K  K+D A DI  + 
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            GK +VSW  MI GY Q    ++AL  F +M  + I+ D   + + + A A L  ++  +
Sbjct: 535 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 594

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA    S F  ++    AL+ +Y+KCG +  A   F+         WN ++ G+   G
Sbjct: 595 QIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSG 654

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             + A+ +F +M       N+ TF  A+ A S +  +++G      + K  G +   +  
Sbjct: 655 NNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVC 713

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            A++ +  + G +++A     ++ ++  ++ + AM+ A   H
Sbjct: 714 NAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSKH 754



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 275/560 (49%), Gaps = 10/560 (1%)

Query: 46  LLEVCT----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LLE C     SL E R++   I+K G  +      KL+  +     L  A +VF+ +P++
Sbjct: 73  LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEI 160
               ++ M+K  A  +          RM  ++V P    ++ +L+ C G        ++I
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQI 192

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H ++I  G          ++++Y++ G ++ A ++FD +  +D  SW  +++G ++N   
Sbjct: 193 HARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECE 252

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+ L   M+  G         S+L A   + SL IG+ +HG  ++ GF S   V  AL
Sbjct: 253 VEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 312

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V +Y   G + +A  +F  M  R+ V++N++I    + G  E+AM +F++M   G+EP +
Sbjct: 313 VSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDS 372

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   + AC+  G L  G  +H    +L   ++  +  +L+++Y+KC  ++ A + F +
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLE 432

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            + + +V WN M++ Y     +  +   F +M+ + I P+ +T  S++     L  +   
Sbjct: 433 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 492

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH+ +I++ F+ N +V + LIDMYAK G + TA  +      + V +W  MI GY  +
Sbjct: 493 EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 552

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
                A+  F +ML+   + +++    A+SAC+    ++EG  IH    +    G    +
Sbjct: 553 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDL 609

Query: 579 DHYGAMVDLLGRAGRLNEAW 598
               A+V L  + G + EA+
Sbjct: 610 PFQNALVTLYSKCGNIEEAY 629



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 223/471 (47%), Gaps = 5/471 (1%)

Query: 134 VAPVVYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           + P      +LL+ C    G +  G+++H Q++  GF  +      +++ Y   G ++ A
Sbjct: 63  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-AN 251
            K+FD MPER + +WN ++   A    +     L  RM  E    +  T   +L A    
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +  + + +H   +  G      V   L+D+Y++ G V+ AR VFDG+  ++  SW +M
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I+   +     EA+R+F  M   G+ PT       L AC  +  LE G  +H L+ +L  
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            +D  + N+L+S+Y     +  A  IFS +  +  V++N +I G +Q G   +A+  F +
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M+   ++PDS T+ S++ A +    +   + +HA   +  F  N  +  AL+++YAKC  
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSD 422

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           + TA   F      +V  WNVM+  YG     + +  +F +M      PN  T+   +  
Sbjct: 423 IETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 482

Query: 552 CSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           C   G +E G    +  +K  + +   +     ++D+  + G+L+ AWD +
Sbjct: 483 CIRLGDLELGEQIHSQIIKTSFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 531



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 9/371 (2%)

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           GSL  G+ +H   ++ GFD+   +S  L+D Y   G ++ A  VFD M  R + +WN MI
Sbjct: 82  GSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMI 141

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLK 370
                     +   +F +M+++ V P   T    L AC   G +   +   +H  +    
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQG 200

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           LG    + N LI +YS+   VDRA  +F  L  K   SW AMI G ++N    EA+  FC
Sbjct: 201 LGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFC 260

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
            M    I P  +   SV+ A  ++  +   + +H LV++  F  + +V  AL+ +Y   G
Sbjct: 261 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 320

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           ++ +A  +F  M++R   T+N +I+G    G G+ A+ELF +M     +P+  T    + 
Sbjct: 321 SLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVV 380

Query: 551 ACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           ACS  G +  G  +H +T+     G        GA+++L  +   +  A ++  +  +E 
Sbjct: 381 ACSSDGTLFSGQQLHAYTT---KLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVE- 436

Query: 609 GITVFGAMLGA 619
            + ++  ML A
Sbjct: 437 NVVLWNVMLVA 447


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 292/781 (37%), Positives = 446/781 (57%), Gaps = 14/781 (1%)

Query: 43   SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +A  L  C SL  L ++   ++KSG        + LVS F ++  L +A  ++  + ++ 
Sbjct: 285  TATYLSSC-SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERN 343

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE----IRRGK 158
                + ++ G  K    + A    +  R D  A  V  Y  LL    +       +R+G+
Sbjct: 344  AVTLNGLIAGLVKQQHGEAAAEIFMGAR-DSAAVNVDTYVVLLSAIAEFSTAEQGLRKGR 402

Query: 159  EIHGQLIVNGFSLDLFAMT-GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            E+H  ++  G      A++ G+VNMYAKCG I++A ++F  M  RD +SWNTI+    QN
Sbjct: 403  EVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQN 462

Query: 218  GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            G+ E A+     M +          +S L + A +G L  G+ +H  A++ G     +VS
Sbjct: 463  GYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVS 522

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP-EEAMRIFQKMLDQGV 336
             ALV MY +CGR+     +F+ M + +VVSWNS++        P  E++++F  M+  G+
Sbjct: 523  NALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGL 582

Query: 337  EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
             P  VT +  L A   L  LE G  +H ++ +  +  D ++ N+L+S Y+K   VD    
Sbjct: 583  VPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCER 642

Query: 397  IFSKLQGKT-LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +FS++ G+   +SWN+MI GY  NG + EA++  C M       D  T   V+ A A ++
Sbjct: 643  LFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVA 702

Query: 456  VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             +     +HA  +RS  E +V V +AL+DMY+KCG +  A  +F  M++++  +WN MI 
Sbjct: 703  ALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMIS 762

Query: 516  GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            GY  HGLG+ A+E+F +M E    P+ +TF+  +SACSH+GLVE G+ YF  L +DYGI 
Sbjct: 763  GYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYF-ELMEDYGIL 821

Query: 576  PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN---VELGEKA 632
            P ++HY  ++DLLGRAG L++  +++++MP++P   ++  +L AC+  K+   ++LG +A
Sbjct: 822  PRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEA 881

Query: 633  ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
            +  L EL+P     +VL +  +AA   W+  AK R  M+   ++K  G S V L + VH+
Sbjct: 882  SRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHT 941

Query: 693  FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
            F +G   HP +K IY  L  LI +I+ AGYVP T  + HD+E+  +E LL  HSEKLA+A
Sbjct: 942  FIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVA 1001

Query: 752  FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            F L  SS G  I I KNLRVCGDCH A +YIS + GR+II+RD  RFH FK+G CSCGDY
Sbjct: 1002 FVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDY 1061

Query: 812  W 812
            W
Sbjct: 1062 W 1062



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 249/519 (47%), Gaps = 24/519 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K GL         LV+ + K   L  A RVF+ +P +    +  ++ G+      +DA
Sbjct: 91  VVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDA 150

Query: 123 VSFLIRMRYDDVA--PVVYNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAMTG 178
                 M  +     P  + +  +L+ C D G  R G   ++HG +    F+ +      
Sbjct: 151 FPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNA 210

Query: 179 VVNMYAKC--GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR- 235
           +++MY  C  G    A ++FD  P RDL++WN +++ +A+ G A     L   M  +   
Sbjct: 211 LISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSG 270

Query: 236 ---RGDFITIVSILPAV-ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
              R    T  S++ A   +  SL +   +    +++G  S + V +ALV  +A+ G ++
Sbjct: 271 IELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLD 330

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A+ ++ G+K RN V+ N +IA  V+  + E A  IF    D      +  ++  L A A
Sbjct: 331 EAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV-LLSAIA 389

Query: 352 DLGDLERGIF----VHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           +    E+G+     VH  +L    +   ++++N L++MY+KC  +D+A  +F  ++ +  
Sbjct: 390 EFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDR 449

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           +SWN +I    QNG    A+  +C MR  +I P +F  +S + + A L ++   + +H  
Sbjct: 450 ISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCD 509

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA- 525
            ++     +  V  AL+ MY +CG +     +F+ M+   V +WN ++   G     +A 
Sbjct: 510 AVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM---GVMASSQAP 566

Query: 526 ---AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
              +V++F+ M++    PN +TF+  ++A +   ++E G
Sbjct: 567 ITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELG 605



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 228/465 (49%), Gaps = 22/465 (4%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +H +++  G + DLF    +VN YAK  +++ A ++FD MP R+ VSW  +++G   +
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 218 GFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKA--VHGYAMRAGFDSI 273
           G  E A  L   M  EG   R    T  S+L A  + G  R+G A  VHG   +  F S 
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 274 VNVSTALVDMYAKC--GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             V  AL+ MY  C  G    A+ VFD    R++++WN++++ Y + G+      +F+ M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 332 L--DQGVE--PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMY 385
              D G+E  PT  T    + A   L     G+     +  LK G  +D+ + ++L+S +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTM 444
           ++   +D A DI+  L+ +  V+ N +I G  +      A   F   R S  +  D++  
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTY-- 381

Query: 445 VSVIPALAELSV----IRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALF 499
           V ++ A+AE S     +R  + +HA V+R+    + + V   L++MYAKCGA+  A  +F
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
            +M  R   +WN +I     +G  +AA+  +  M +    P++   +  +S+C+  GL+ 
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
            G        K +G+        A+V + G  GR++E W+    M
Sbjct: 502 AGQQLHCDAVK-WGLYLDTSVSNALVKMYGECGRMSECWEIFNSM 545



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 33/397 (8%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           +++H   ++ G    + ++  LV+ YAK  R++ AR VFDGM  RN VSW  +I+ +V  
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 319 GNPEEAMRIFQKMLDQ--GVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTD 374
           G PE+A  +F+ ML +  G  PT+ T    L AC D G    G  + VH L+ + +  ++
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 375 VSMTNSLISMYSKCK--KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            ++ N+LISMY  C       A  +F     + L++WNA++  YA+ G        F  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 433 RSKN----IKPDSFTMVSVIPA--LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           +  +    ++P   T  S+I A  L+  S +     +   V++S    +++V +AL+  +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           A+ G +  A+ ++  + ER+  T N +I G      G+AA E+F    +      D T++
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYV 382

Query: 547 CAISACSHSGLVEEGI--------------HYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
             +SA +     E+G+              H +  +    G+  +    GA +D   R  
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA-IDKACRVF 441

Query: 593 RLNEAWDFIQKMPIEPGITVFG----AMLGACKIHKN 625
           +L EA D I    I   +   G    AM+  C + +N
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQN 478


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/833 (34%), Positives = 461/833 (55%), Gaps = 41/833 (4%)

Query: 15  STPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLF 74
           +T T TLH+    L     +P+   + P    L+ C +L EL+++   ++K G+ + +  
Sbjct: 2   ATTTTTLHQSSSPL----LLPTTTQK-PKNSSLQTCKTLIELKQLHCNMLKKGVFNINKL 56

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALY--HTMLKGYAKFASLDDAVSFLIRMR-Y 131
               V +   + SL+ A   F+       +LY  +T+++GYA      +A+   + M   
Sbjct: 57  IAACVQM-GTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIV 115

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             + P  + + +LL  C  +     G ++HG ++  G   DLF    +++ YA CG+++ 
Sbjct: 116 MGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDL 175

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
             K+FD M ER++VSW +++ G++    A+ A+ L   M E G   + +T+V  + A A 
Sbjct: 176 GRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAK 235

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +  L +GK V       G  S   V  AL+DMY KCG +   R +FD    +N+V +N++
Sbjct: 236 LKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTI 295

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           ++ YV+ G   E + +  +ML +G  P  VT++  + ACA LGDL  G   H  + +  L
Sbjct: 296 MSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGL 355

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN-------- 423
               +++N++I MY KC K + A  +F  +  KT+V+WN++I G  ++G +         
Sbjct: 356 ERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGE 415

Query: 424 -----------------------EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
                                  EA++   +M+++ IK D  TMV +  A   L  +  A
Sbjct: 416 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 475

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           KWI+  + ++    ++ + TAL+DM+++CG    A  +F+ M +R V+ W   I      
Sbjct: 476 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 535

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  K A+ELF++ML+   K +D  F+  ++A SH G V++G   F +++K +G+ P + H
Sbjct: 536 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 595

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           YG MVDLLGRAG L EA+D ++ MPI+P   ++G+ L AC+ HKNVE    A  ++ +L 
Sbjct: 596 YGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLA 655

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P++ G HVLL+NIYA+A  W+ +A+VR  M++KG QK  G S +E+   +  F SG   H
Sbjct: 656 PEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESH 715

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
            ++ +I   L+ +   I   GYVPD TN + DV++  +E+LLS HSEKLA+A+GL+N+  
Sbjct: 716 TENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGK 775

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G  I + KNLR+C DCH+  K +S + GREI VRD +R+H FK G CSC D+W
Sbjct: 776 GIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/698 (38%), Positives = 408/698 (58%), Gaps = 43/698 (6%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           ++ KE+H +++  G   D F+ + +    A      ++ A  +FD++P+ +L +WNT++ 
Sbjct: 39  KQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIR 98

Query: 213 GFAQNG--FAELA--LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            +A +   F      LDL+ +  +   +    T   ++ A + + + R+G AVHG A++ 
Sbjct: 99  AYASSSDPFQSFVIFLDLLDKCEDLPNK---FTFPFVIKAASELKASRVGTAVHGMAIKL 155

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
            F   + +  +LV  Y  CG +  A  +F G+  ++VVSWNSMI+A+ +G  PE+A+ +F
Sbjct: 156 SFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELF 215

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            KM  + V P +VT++  L ACA   DLE G +V   +++  +  D+++ N+++ MY+KC
Sbjct: 216 LKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKC 275

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYA------------------------------- 417
             VD A  +F ++  + + SW  M+ GYA                               
Sbjct: 276 GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYE 335

Query: 418 QNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           QNG+  EAL  F +++ SK  KPD  T+VS + A A+L  I    WIH  + R     N 
Sbjct: 336 QNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNC 395

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            ++++L+DMYAKCG++  A  +F  + ER V  W+ MI G G HG GKAA++LF +M E 
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEA 455

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             KPN +TF   + ACSH+GLV+EG  +F  ++  YG+ P M HY  MVD+LGRAG L E
Sbjct: 456 KVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEE 515

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A + I +M   P  +V+GA+LGAC +H NVELGE A+++L +L+P   G  VLL+NIYA 
Sbjct: 516 AMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAK 575

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
              W+K++++R +M    L+K PGCS +E    VH F  G   HP S  IY+ LE +  +
Sbjct: 576 TGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATK 635

Query: 717 IKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
           +K+ GY P+ + +  +  ED ++E  LS HSEKLAIAFGL+  +P   I + KNLR+CGD
Sbjct: 636 LKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGD 695

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH   K +S V  R+I++RD +RFH F++G CSC DYW
Sbjct: 696 CHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 212/466 (45%), Gaps = 56/466 (12%)

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG- 269
           V   +   F+ L  +L+ R H+            IL  +    S +  K VH   +R G 
Sbjct: 6   VPSISLQNFSTLNNNLLFRNHQ------------ILSTIDKCSSSKQLKEVHARMLRTGL 53

Query: 270 -FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
            FD             +    ++ AR +FD +   N+ +WN++I AY    +P ++  IF
Sbjct: 54  FFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIF 113

Query: 329 QKMLDQGVE-PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
             +LD+  + P   T    + A ++L     G  VH +  +L  G D+ + NSL+  Y  
Sbjct: 114 LDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGA 173

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +  A  +F  +  K +VSWN+MI  +AQ     +AL  F KM  +N+ P+S TMV V
Sbjct: 174 CGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGV 233

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + A A+   + + +W+ + + R   + ++ +  A++DMY KCG+V  A+ LFD M ER V
Sbjct: 234 LSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDV 293

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKM--------------------------------LE 535
            +W +M+DGY   G   AA  +FN M                                L 
Sbjct: 294 FSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLS 353

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
              KP+++T +  +SAC+  G ++ G  IH +    K  GI        ++VD+  + G 
Sbjct: 354 KIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI---KREGIVLNCHLISSLVDMYAKCGS 410

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           L +A +    +  E  + V+ AM+    +H     G+ A +  FE+
Sbjct: 411 LEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAAIDLFFEM 452


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/771 (33%), Positives = 434/771 (56%), Gaps = 4/771 (0%)

Query: 46   LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L  C  ++ L    ++  L++K G          LVSL+    +L  A  +F  +  + 
Sbjct: 294  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
               Y+T++ G ++    + A+    RM  D + P       L+  C   G + RG+++H 
Sbjct: 354  AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                 GF+ +      ++N+YAKC  IE A   F      ++V WN ++  +        
Sbjct: 414  YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            +  +  +M  E    +  T  SIL     +G L +G+ +H   ++  F     V + L+D
Sbjct: 474  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MYAK G+++TA  +      ++VVSW +MIA Y +    ++A+  F++MLD+G+    V 
Sbjct: 534  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593

Query: 343  IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  A+ ACA L  L+ G  +H         +D+   N+L+++YS+C K++ +   F + +
Sbjct: 594  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653

Query: 403  GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
                ++WNA++ G+ Q+G   EAL  F +M  + I  ++FT  S + A +E + ++  K 
Sbjct: 654  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +HA++ ++ ++    V  ALI MYAKCG++  A   F  ++ ++  +WN +I+ Y  HG 
Sbjct: 714  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            G  A++ F++M+    +PN +T +  +SACSH GLV++GI YF S+  +YG+ P  +HY 
Sbjct: 774  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             +VD+L RAG L+ A +FIQ+MPI+P   V+  +L AC +HKN+E+GE AA+ L EL+P+
Sbjct: 834  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
            +   +VLL+N+YA +  WD     R  M++KG++K PG S +E+KN +HSFY G   HP 
Sbjct: 894  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            +  I+ + + L       GYV D  S +++++   ++ ++  HSEKLAI+FGLL+     
Sbjct: 954  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I++ KNLRVC DCH   K++S V+ REIIVRD +RFH F+ G CSC DYW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 275/556 (49%), Gaps = 5/556 (0%)

Query: 46  LLEVC----TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +LE C     +   + +I   I+  GL D  +    L+ L+ +   +  A RVF+ +  K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
             + +  M+ G +K     +A+     M    + P  Y ++ +L  C  +  +  G+++H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G ++  GFS D +    +V++Y   G +  A  +F  M +RD V++NT++ G +Q G+ E
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A++L  RMH +G   D  T+ S++ A +  G+L  G+ +H Y  + GF S   +  AL+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++YAKC  +ETA   F   +  NVV WN M+ AY    +   + RIF++M  + + P   
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L  C  LGDLE G  +H  + +     +  + + LI MY+K  K+D A DI  + 
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            GK +VSW  MI GY Q    ++AL  F +M  + I+ D   + + + A A L  ++  +
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA    S F  ++    AL+ +Y++CG +  +   F+         WN ++ G+   G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             + A+ +F +M       N+ TF  A+ A S +  +++G      + K  G +   +  
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVC 730

Query: 582 GAMVDLLGRAGRLNEA 597
            A++ +  + G +++A
Sbjct: 731 NALISMYAKCGSISDA 746



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 278/560 (49%), Gaps = 10/560 (1%)

Query: 46  LLEVCT----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LLE C     SL E R++   I+K GL        KL   +     L  A +VF+ +P++
Sbjct: 90  LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEI 160
               ++ M+K  A    + +     +RM  ++V P    ++ +L+ C G        ++I
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +++  G          ++++Y++ G ++ A ++FD +  +D  SW  +++G ++N   
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+ L   M+  G         S+L A   + SL IG+ +HG  ++ GF S   V  AL
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V +Y   G + +A  +F  M  R+ V++N++I    + G  E+AM +F++M   G+EP +
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   + AC+  G L RG  +H    +L   ++  +  +L+++Y+KC  ++ A D F +
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            + + +V WN M++ Y     +  +   F +M+ + I P+ +T  S++     L  +   
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH+ +I++ F+ N +V + LIDMYAK G + TA  +      + V +W  MI GY  +
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
                A+  F +ML+   + +++    A+SAC+    ++EG  IH    +    G    +
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDL 626

Query: 579 DHYGAMVDLLGRAGRLNEAW 598
               A+V L  R G++ E++
Sbjct: 627 PFQNALVTLYSRCGKIEESY 646



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 221/471 (46%), Gaps = 5/471 (1%)

Query: 134 VAPVVYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           + P      +LL+ C    G +  G+++H Q++  G   +      + + Y   G +  A
Sbjct: 80  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-AN 251
           +K+FD MPER + +WN ++   A          L  RM  E    +  T   +L A    
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +  + + +H   +  G      V   L+D+Y++ G V+ AR VFDG++ ++  SW +M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I+   +     EA+R+F  M   G+ PT       L AC  +  LE G  +H L+ +L  
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            +D  + N+L+S+Y     +  A  IFS +  +  V++N +I G +Q G   +A+  F +
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M    ++PDS T+ S++ A +    +   + +HA   +  F  N  +  AL+++YAKC  
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           + TA   F      +V  WNVM+  YG     + +  +F +M      PN  T+   +  
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499

Query: 552 CSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           C   G +E G    +  +K ++ +   +     ++D+  + G+L+ AWD +
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 548



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 173/372 (46%), Gaps = 11/372 (2%)

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           GSL  G+ +H   ++ G DS   +S  L D Y   G +  A  VFD M  R + +WN MI
Sbjct: 99  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC---ADLGDLERGIFVHKLLDQL 369
                     E   +F +M+ + V P   T    L AC   +   D+   I    L   L
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           +  T V   N LI +YS+   VD A  +F  L+ K   SW AMI G ++N    EA+  F
Sbjct: 219 RDSTVV--CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           C M    I P  +   SV+ A  ++  +   + +H LV++  F  + +V  AL+ +Y   
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G + +A  +F  M++R   T+N +I+G    G G+ A+ELF +M     +P+  T    +
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396

Query: 550 SACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            ACS  G +  G  +H +T+     G        GA+++L  +   +  A D+  +  +E
Sbjct: 397 VACSADGTLFRGQQLHAYTT---KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453

Query: 608 PGITVFGAMLGA 619
             + ++  ML A
Sbjct: 454 -NVVLWNVMLVA 464


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/771 (33%), Positives = 434/771 (56%), Gaps = 4/771 (0%)

Query: 46   LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L  C  ++ L    ++  L++K G          LVSL+    +L  A  +F  +  + 
Sbjct: 254  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
               Y+T++ G ++    + A+    RM  D + P       L+  C   G + RG+++H 
Sbjct: 314  AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                 GF+ +      ++N+YAKC  IE A   F      ++V WN ++  +        
Sbjct: 374  YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            +  +  +M  E    +  T  SIL     +G L +G+ +H   ++  F     V + L+D
Sbjct: 434  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MYAK G+++TA  +      ++VVSW +MIA Y +    ++A+  F++MLD+G+    V 
Sbjct: 494  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553

Query: 343  IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  A+ ACA L  L+ G  +H         +D+   N+L+++YS+C K++ +   F + +
Sbjct: 554  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613

Query: 403  GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
                ++WNA++ G+ Q+G   EAL  F +M  + I  ++FT  S + A +E + ++  K 
Sbjct: 614  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 673

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +HA++ ++ ++    V  ALI MYAKCG++  A   F  ++ ++  +WN +I+ Y  HG 
Sbjct: 674  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 733

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            G  A++ F++M+    +PN +T +  +SACSH GLV++GI YF S+  +YG+ P  +HY 
Sbjct: 734  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 793

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             +VD+L RAG L+ A +FIQ+MPI+P   V+  +L AC +HKN+E+GE AA+ L EL+P+
Sbjct: 794  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 853

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
            +   +VLL+N+YA +  WD     R  M++KG++K PG S +E+KN +HSFY G   HP 
Sbjct: 854  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 913

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            +  I+ + + L       GYV D  S +++++   ++ ++  HSEKLAI+FGLL+     
Sbjct: 914  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 973

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I++ KNLRVC DCH   K++S V+ REIIVRD +RFH F+ G CSC DYW
Sbjct: 974  PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 275/556 (49%), Gaps = 5/556 (0%)

Query: 46  LLEVC----TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +LE C     +   + +I   I+  GL D  +    L+ L+ +   +  A RVF+ +  K
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
             + +  M+ G +K     +A+     M    + P  Y ++ +L  C  +  +  G+++H
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 271

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G ++  GFS D +    +V++Y   G +  A  +F  M +RD V++NT++ G +Q G+ E
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 331

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A++L  RMH +G   D  T+ S++ A +  G+L  G+ +H Y  + GF S   +  AL+
Sbjct: 332 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 391

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++YAKC  +ETA   F   +  NVV WN M+ AY    +   + RIF++M  + + P   
Sbjct: 392 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 451

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L  C  LGDLE G  +H  + +     +  + + LI MY+K  K+D A DI  + 
Sbjct: 452 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 511

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            GK +VSW  MI GY Q    ++AL  F +M  + I+ D   + + + A A L  ++  +
Sbjct: 512 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 571

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA    S F  ++    AL+ +Y++CG +  +   F+         WN ++ G+   G
Sbjct: 572 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 631

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             + A+ +F +M       N+ TF  A+ A S +  +++G      + K  G +   +  
Sbjct: 632 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVC 690

Query: 582 GAMVDLLGRAGRLNEA 597
            A++ +  + G +++A
Sbjct: 691 NALISMYAKCGSISDA 706



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 278/560 (49%), Gaps = 10/560 (1%)

Query: 46  LLEVCT----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LLE C     SL E R++   I+K GL        KL   +     L  A +VF+ +P++
Sbjct: 50  LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEI 160
               ++ M+K  A    + +     +RM  ++V P    ++ +L+ C G        ++I
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 169

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +++  G          ++++Y++ G ++ A ++FD +  +D  SW  +++G ++N   
Sbjct: 170 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 229

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+ L   M+  G         S+L A   + SL IG+ +HG  ++ GF S   V  AL
Sbjct: 230 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 289

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V +Y   G + +A  +F  M  R+ V++N++I    + G  E+AM +F++M   G+EP +
Sbjct: 290 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 349

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   + AC+  G L RG  +H    +L   ++  +  +L+++Y+KC  ++ A D F +
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 409

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            + + +V WN M++ Y     +  +   F +M+ + I P+ +T  S++     L  +   
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH+ +I++ F+ N +V + LIDMYAK G + TA  +      + V +W  MI GY  +
Sbjct: 470 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 529

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
                A+  F +ML+   + +++    A+SAC+    ++EG  IH    +    G    +
Sbjct: 530 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDL 586

Query: 579 DHYGAMVDLLGRAGRLNEAW 598
               A+V L  R G++ E++
Sbjct: 587 PFQNALVTLYSRCGKIEESY 606



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 221/471 (46%), Gaps = 5/471 (1%)

Query: 134 VAPVVYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           + P      +LL+ C    G +  G+++H Q++  G   +      + + Y   G +  A
Sbjct: 40  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-AN 251
           +K+FD MPER + +WN ++   A          L  RM  E    +  T   +L A    
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +  + + +H   +  G      V   L+D+Y++ G V+ AR VFDG++ ++  SW +M
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I+   +     EA+R+F  M   G+ PT       L AC  +  LE G  +H L+ +L  
Sbjct: 220 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 279

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            +D  + N+L+S+Y     +  A  IFS +  +  V++N +I G +Q G   +A+  F +
Sbjct: 280 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 339

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M    ++PDS T+ S++ A +    +   + +HA   +  F  N  +  AL+++YAKC  
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           + TA   F      +V  WNVM+  YG     + +  +F +M      PN  T+   +  
Sbjct: 400 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459

Query: 552 CSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           C   G +E G    +  +K ++ +   +     ++D+  + G+L+ AWD +
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 508



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 11/372 (2%)

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           GSL  G+ +H   ++ G DS   +S  L D Y   G +  A  VFD M  R + +WN MI
Sbjct: 59  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 118

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG---DLERGIFVHKLLDQL 369
                     E   +F +M+ + V P   T    L AC       D+   I    L   L
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           +  T V   N LI +YS+   VD A  +F  L+ K   SW AMI G ++N    EA+  F
Sbjct: 179 RDSTVV--CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           C M    I P  +   SV+ A  ++  +   + +H LV++  F  + +V  AL+ +Y   
Sbjct: 237 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 296

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G + +A  +F  M++R   T+N +I+G    G G+ A+ELF +M     +P+  T    +
Sbjct: 297 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 356

Query: 550 SACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            ACS  G +  G  +H +T+     G        GA+++L  +   +  A D+  +  +E
Sbjct: 357 VACSADGTLFRGQQLHAYTT---KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 413

Query: 608 PGITVFGAMLGA 619
             + ++  ML A
Sbjct: 414 -NVVLWNVMLVA 424


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/700 (37%), Positives = 407/700 (58%), Gaps = 32/700 (4%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER- 202
           LL+    V    + K++H Q++          ++ ++++Y+    + ++  +F+ +P   
Sbjct: 11  LLQNPSSVKSKSQAKQLHAQILRTSLPSPSL-LSTILSIYSNLNLLHDSLLIFNSLPSPP 69

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
             ++W +I+  +  +G    +L    +M   G+  D     S+L +   +  LR G++VH
Sbjct: 70  TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVE-----------------------------TA 293
           G  +R G    +    AL++MY+K   +E                             + 
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R VF+ M  R++VSWN++I+   + G  E+A+ + ++M +  + P + T+   L   A+ 
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
            +L +G  +H    +     DV + +SLI MY+KC +VD +  +F  L     +SWN++I
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            G  QNG  +E L +F +M    IKP+  +  S++PA A L+ +   K +H  +IRS F+
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 369

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            NVF+ +AL+DMYAKCG + TAR +FD M    + +W  MI GY  HG    A+ LF +M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
                KPN + F+  ++ACSH+GLV+E   YF S+ +DY I P ++HY A+ DLLGR GR
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 489

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
           L EA++FI  M IEP  +V+  +L AC++HKN+EL EK + +LF +DP   G +VLL+NI
Sbjct: 490 LEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 549

Query: 654 YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
           Y+AA  W    K+R  M  KG++K P CS +E+KN+VH+F +G   HP   RI   L+ L
Sbjct: 550 YSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVL 609

Query: 714 IDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
           +++++  GYV DT  + HDVE+  +  LL SHSE+LAI FG++++  G+TI + KNLRVC
Sbjct: 610 LEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVC 669

Query: 773 GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            DCH ATK+IS + GREI+VRD  RFH FK+G CSCGD+W
Sbjct: 670 VDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 263/510 (51%), Gaps = 36/510 (7%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+  +S+K   + +++   I+++ L    L  T ++S++   N L D+  +F  +P   
Sbjct: 11  LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPP 69

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
             L + ++++ Y        ++SF I+M      P    +  +LK C  + ++R G+ +H
Sbjct: 70  TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA----------------------------- 192
           G +I  G   DL+    ++NMY+K   +EE                              
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            K+F+ MP+RD+VSWNT+++G AQNG  E AL +V  M     R D  T+ S+LP  A  
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            +L  GK +HGYA+R G+D+ V + ++L+DMYAKC RV+ +  VF  +   + +SWNS+I
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           A  V+ G  +E ++ FQ+ML   ++P +V+    + ACA L  L  G  +H  + + +  
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 369

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            +V + ++L+ MY+KC  +  A  IF K++   +VSW AMI+GYA +G   +A++ F +M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
             + +KP+    ++V+ A +   ++  A K+ +++         +    A+ D+  + G 
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 489

Query: 492 VGTARALF-DMMNERHVTTWNVMIDGYGTH 520
           +  A     DM  E   + W+ ++     H
Sbjct: 490 LEEAYEFISDMHIEPTGSVWSTLLAACRVH 519



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 140/284 (49%), Gaps = 12/284 (4%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I++G        + L+ ++ K   + D+ RVF  +P      +++++ G  +    D+ +
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  +M    + P   +++ ++  C  +  +  GK++HG +I + F  ++F  + +V+MY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A  +FD+M   D+VSW  ++ G+A +G A  A+ L  RM  EG + +++  +
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442

Query: 244 SILPAVANVGSLR-----IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++L A ++ G +             Y +  G +       A+ D+  + GR+E A     
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHY----AAVADLLGRVGRLEEAYEFIS 498

Query: 299 GMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            M      S W++++AA     N E A ++ +K+    V+P N+
Sbjct: 499 DMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNI 540


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 421/740 (56%), Gaps = 7/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++ K  S+ +   VFE +P K    + ++L G A      + ++   RMR + + 
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + +  +L      G +  G+ +H Q +  G    +F    ++NMYAKCG +E+A  +
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ M  RD+VSWNT++AG   N     AL L         +    T  +++   AN+  L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNVVSWNSMIAA 314
            + + +H   ++ GF    NV TAL D Y+KCG +  A  +F     SRNVVSW ++I+ 
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            ++ G+   A+ +F +M +  V P   T    L A   +   +    +H  + +      
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IHAQVIKTNYQHI 434

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            S+  +L++ YSK    + A  IF  ++ K +V+W+AM+  +AQ G    A   F KM  
Sbjct: 435 PSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI 494

Query: 435 KNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           + IKP+ FT+ SVI A A  S  +   +  HA+ I+  +   + V +AL+ MY++ G + 
Sbjct: 495 QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNID 554

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +A+ +F+   +R + +WN MI GY  HG    A+E F +M     + + +TFL  I  C+
Sbjct: 555 SAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCT 614

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV EG  YF S+ +D+ I P M+HY  MVDL  RAG+L+E    I+ MP   G  V+
Sbjct: 615 HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVW 674

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +LGAC++HKNVELG+ +A++L  L+P +   +VLL+NIYAAA  W +  +VR +M+ +
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K  GCS +++KN+VHSF +    HP S +IY  L+ +I  +K  GY P+T+ + HD+
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDI 794

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  +E +L +HSE+LA+AFGL+ + PG+ + I KNLRVCGDCH   K +S++  REII+
Sbjct: 795 AEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIM 854

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F  G CSCGD+W
Sbjct: 855 RDCSRFHHFNGGACSCGDFW 874



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 243/457 (53%), Gaps = 8/457 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           +LK C  V +   G+++H   +  G    ++ A T +V+MY KCG + E  ++F+ MP++
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++V+W +++ G A        + L  RM  EG   +  T  S+L AVA+ G+L +G+ VH
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             +++ G  S V V  +L++MYAKCG VE A+ VF+ M++R++VSWN+++A         
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+++F +      + T  T    +  CA+L  L     +H  + +       ++  +L 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344

Query: 383 SMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
             YSKC ++  A +IFS   G + +VSW A+I G  QNG +  A+  F +MR   + P+ 
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FT  +++   A LS++     IHA VI++ ++    V TAL+  Y+K G+   A ++F M
Sbjct: 405 FTYSAMLK--ASLSIL--PPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKM 460

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-HSGLVEE 560
           + ++ V  W+ M+  +   G  + A  LFNKM     KPN+ T    I AC+  S  V++
Sbjct: 461 IEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ 520

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           G   F ++   Y     +    A+V +  R G ++ A
Sbjct: 521 G-RQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 178/359 (49%), Gaps = 3/359 (0%)

Query: 196 FDRMPERDL-VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
            D +P RD  V  N ++  +A+ G     LD  +     G   D  T+  +L A  +V  
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 255 LRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             +G+ +H   ++ G D   V+  T+LVDMY KCG V     VF+GM  +NVV+W S++ 
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
                    E M +F +M  +G+ P   T    L A A  G L+ G  VH    +    +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            V + NSL++MY+KC  V+ A  +F+ ++ + +VSWN ++ G   N    EAL  F + R
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           +   K    T  +VI   A L  +  A+ +H+ V++  F     VMTAL D Y+KCG + 
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354

Query: 494 TARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
            A  +F M    R+V +W  +I G   +G    AV LF++M E    PN+ T+   + A
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 292/798 (36%), Positives = 430/798 (53%), Gaps = 80/798 (10%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYN 140
           + K  SLSDA  +F  +P +    ++T++ GY +     DA+   + MR   D  P  + 
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFT 164

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG----------QIE 190
           +   +K CG +G      ++ G L   GF  D    TG+V+M+ +CG          QIE
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224

Query: 191 E---------------------AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
                                 A ++F+ MPERD+VSWN +V+  +Q+G A  AL +   
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           MH  G R D  T  S L A A + SL  GK +H   +R+       V++A+V++YAKCG 
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
            + AR VF  ++ RN VSW  +I  +++ G   E++ +F +M  + +      +   +  
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404

Query: 350 CADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           C++  D+     +H L   LK G    V ++NSLISMY+KC  +  A  IFS ++ + +V
Sbjct: 405 CSNRMDMCLARQLHSL--SLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIV 462

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIK----------------------------- 438
           SW  M+  Y+Q G + +A  +F  M ++N+                              
Sbjct: 463 SWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEK 522

Query: 439 ---PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
              PD  T V++    A++   +    I    ++     +  VM A+I MY+KCG +  A
Sbjct: 523 DVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEA 582

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FD ++ + + +WN MI GY  HG+GK A+E+F+ ML+   KP+ I+++  +S+CSHS
Sbjct: 583 RKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHS 642

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GLV+EG  YF  LK+D+ + P ++H+  MVDLL RAG L EA + I +MP++P   V+GA
Sbjct: 643 GLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGA 702

Query: 616 MLGACKIHKNVELGEKAANRLFELD-PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           +L ACK H N EL E AA  LF+LD PD GGY +LLA IYA A      A+VR +M  KG
Sbjct: 703 LLSACKTHGNNELAELAAKHLFDLDSPDSGGY-MLLAKIYADAGKSVDSAQVRKLMRDKG 761

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVED 734
           ++K PG S +E+KN+VH F +    HPQ   I   L+ L+++I   GYV   +   ++  
Sbjct: 762 IKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIH- 820

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
                    HSEKLA+AFG++N      IHI KNLR+CGDCH   K IS VTGRE ++RD
Sbjct: 821 ---------HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRD 871

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH FK G CSCGDYW
Sbjct: 872 AVRFHHFKGGSCSCGDYW 889



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 262/532 (49%), Gaps = 53/532 (9%)

Query: 59  ILPLIIKSGLCD---QHLFQTKLVSLFCKYNSLSDAAR---------VFEPIPDKLDALY 106
           I+ + ++ G  D   +   Q +  ++FC+ + L+  A+         +FE +P++    +
Sbjct: 203 IVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSW 262

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           + M+   ++     +A+S  + M    V      YT  L  C  +  +  GK++H Q+I 
Sbjct: 263 NMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIR 322

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +   +D +  + +V +YAKCG  +EA ++F  + +R+ VSW  ++ GF Q G    +L+L
Sbjct: 323 SLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLEL 382

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             +M  E    D   + +I+   +N   + + + +H  ++++G    V +S +L+ MYAK
Sbjct: 383 FNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAK 442

Query: 287 CGRVET-------------------------------ARLVFDGMKSRNVVSWNSMIAAY 315
           CG ++                                AR  FDGM +RNV++WN+M+ AY
Sbjct: 443 CGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAY 502

Query: 316 VEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           ++ G  E+ ++++  ML ++ V P  VT +     CAD+G  + G  +     ++ L  D
Sbjct: 503 IQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILD 562

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            S+ N++I+MYSKC ++  A  IF  L  K LVSWNAMI GY+Q+G   +A+  F  M  
Sbjct: 563 TSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLK 622

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV----MTALIDMYAKCG 490
           K  KPD  + V+V+ + +   +++  K+   ++ R   + NV       + ++D+ A+ G
Sbjct: 623 KGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKR---DHNVSPGLEHFSCMVDLLARAG 679

Query: 491 AVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
            +  A+ L D M  +     W  ++    THG  + A EL  K L     P+
Sbjct: 680 NLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA-ELAAKHLFDLDSPD 730



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 68/492 (13%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR-G 237
           ++N YAK G + +A ++F RMP RD+ SWNT+++G+ Q+G    A++    M   G    
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL-- 295
           +  T    + +   +G   +   + G   + GF    +V+T +VDM+ +CG V+ A    
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220

Query: 296 -----------------------------VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
                                        +F+ M  R+VVSWN M++A  + G   EA+ 
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +   M ++GV   + T   +L ACA L  L  G  +H  + +     D  + ++++ +Y+
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC     A  +FS L+ +  VSW  +I G+ Q G  +E+L  F +MR++ +  D F + +
Sbjct: 341 KCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALAT 400

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC----------------- 489
           +I   +    +  A+ +H+L ++S   + V +  +LI MYAKC                 
Sbjct: 401 IISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERD 460

Query: 490 --------------GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML- 534
                         G +G AR  FD M+ R+V TWN M+  Y  HG  +  +++++ ML 
Sbjct: 461 IVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLT 520

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           E    P+ +T++     C+  G  + G    T      G+        A++ +  + GR+
Sbjct: 521 EKDVIPDWVTYVTLFRGCADMGANKLG-DQITGHTVKVGLILDTSVMNAVITMYSKCGRI 579

Query: 595 NEA---WDFIQK 603
           +EA   +DF+ +
Sbjct: 580 SEARKIFDFLSR 591


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/809 (34%), Positives = 449/809 (55%), Gaps = 33/809 (4%)

Query: 6   QCQL-SVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLII 64
            C L + + N++P Q          ++    S   +   +      TS K L R   L I
Sbjct: 7   HCSLYNAYKNASPEQNKPPKAAQFKRKTTRKSPFIKRAQSK-----TSFKPLARPNDLNI 61

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
              LC            F +   + +A  +FE +      +++ +++GY       +A+ 
Sbjct: 62  TRDLCG-----------FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAID 110

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
           F  RM  + +    + + +++K CG++  +  G+++HG+LI  GF LD++    +++MY 
Sbjct: 111 FYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYL 170

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           K G IE A K+FD MP RDLVSWN++V+G+  +G    +L     M   G + D   ++S
Sbjct: 171 KIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMIS 230

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            L A +    LR G  +H   +R+  +  + V T+L+DMY KCG+V+ A  VF+ + S+N
Sbjct: 231 ALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKN 290

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +V+WN+MI     GG  E          D  V P  +T++  L +C+  G L  G  +H 
Sbjct: 291 IVAWNAMI-----GGMQE----------DDKVIPDVITMINLLPSCSQSGALLEGKSIHG 335

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              +      + +  +L+ MY KC ++  A  +F+++  K +VSWN M+  Y QN +  E
Sbjct: 336 FAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKE 395

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F  + ++ +KPD+ T+ SV+PA+AEL+     K IH+ +++     N F+  A++ 
Sbjct: 396 ALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVY 455

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG + TAR  FD M  + V +WN MI  Y  HG G+ +++ F++M     KPN  T
Sbjct: 456 MYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGST 515

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACS SGL++EG  +F S+K +YGI+P ++HYG M+DLLGR G L+EA  FI++M
Sbjct: 516 FVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEM 575

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P+ P   ++G++L A + H +V L E AA  +  L  D  G +VLL+N+YA A  W+ + 
Sbjct: 576 PLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVD 635

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +++ +M+++GL KT GCS+V++     SF +    H  +  IY  L+ L+ +I    Y+ 
Sbjct: 636 RIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLH 695

Query: 725 DTNSIHDVEDYVQE-NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
                  ++   +  N    HS KLAI FGL++++ G+ + +RKN R+C DCH A K IS
Sbjct: 696 SLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKIS 755

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            VT REI+V D   FH F++G CSC DYW
Sbjct: 756 QVTKREIVVGDAKVFHHFRDGCCSCRDYW 784


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 263/736 (35%), Positives = 432/736 (58%), Gaps = 1/736 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++++ K   L+ A R+F+ +P++    + T+++ +A+    + A +   R+R++     
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +LK+   +        +H      G   + F  +G+++ Y+ C  + +A  +F+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +  +D V W  +V+ +++N   E A  + ++M   G + +   + S+L A   + S+ +
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +HG A++   D+  +V  AL+DMYAKCG ++ ARL F+ +   +V+  + MI+ Y +
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +++   V P   ++   L AC ++  L+ G  +H    ++   +D+ +
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+  Y+KC  +D +  IFS L+    VSWN +++G++Q+G   EAL+ FC+M++  +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
                T  SV+ A A  + IR+A  IH  + +S F  +  +  +LID YAKCG +  A  
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 521

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  + ER + +WN +I GY  HG    A+ELF++M +   + NDITF+  +S CS +GL
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V  G+  F S++ D+GI+P M+HY  +V LLGRAGRLN+A  FI  +P  P   V+ A+L
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C IHKNV LG  +A ++ E++P +   +VLL+N+YAAA   D++A +R  M   G++K
Sbjct: 642 SSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 701

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S VE+K E+H+F  GS  HP  + I   LE L  +    GY+PD N + HDV+   
Sbjct: 702 VPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQ 761

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +  +L  HSE+LA+A+GL+ + PG  I I KNLR C DCH A   IS +  REIIVRD++
Sbjct: 762 KTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDIN 821

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F++G CSCGDYW
Sbjct: 822 RFHHFEDGKCSCGDYW 837



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 238/482 (49%), Gaps = 6/482 (1%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           L+ C   G+ R G+ +HG ++  G    LDLF    ++NMY K G +  A ++FDRMPER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++VS+ T+V   AQ G  E A  L  R+  EG   +   + ++L     + +  +   VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             A + G D    V + L+D Y+ C  V  A  VF+G+  ++ V W +M++ Y E   PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
            A R+F KM   G +P    +   L A   L  +  G  +H    +    T+  +  +L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY+KC  +  A   F  +    ++  + MI  YAQ+ +  +A   F ++   ++ P+ +
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ SV+ A   +  + + K IH   I+   E ++FV  AL+D YAKC  + ++  +F  +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
            + +  +WN ++ G+   GLG+ A+ +F +M         +T+   + AC+ +  +    
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 563 HYFTSLKKD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
               S++K  +  + V+ +  +++D   + G + +A    Q + +E  I  + A++    
Sbjct: 486 QIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYA 542

Query: 622 IH 623
           +H
Sbjct: 543 LH 544



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 6/175 (3%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           Q A +P     + S  +L  C S   +R   +I   I KS   +  +    L+  + K  
Sbjct: 457 QAAQMPCTQVTYSS--VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCG 514

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            + DA +VF+ + ++    ++ ++ GYA      DA+    RM   +V      +  LL 
Sbjct: 515 YIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 574

Query: 147 VCGDVGEIRRGKEIHGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           VC   G +  G  +   + I +G    +   T +V +  + G++ +A +    +P
Sbjct: 575 VCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP 629


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 403/675 (59%), Gaps = 45/675 (6%)

Query: 147  VCGDV----GEIRRGKEIHGQLIVNGFSLDLFAMTGV----VNMYAKCGQIEEAYKMFDR 198
            +CG +     +I+  K++H ++ ++    DL +   +    +  YA CG+      +FD 
Sbjct: 1029 LCGQILDKNPDIKYLKKLHSKICIDH---DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDE 1085

Query: 199  MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
            +P++++V +N ++  +  N     AL +   M   G   D  T   +L A +    L +G
Sbjct: 1086 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVG 1145

Query: 259  KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
              +H   +R G D  V V   L+ MY KCG +  A  V D M  R+VVSWNS++A     
Sbjct: 1146 MQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARN 1205

Query: 319  GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            G  ++A+ + ++M   G++P   T+   L A                           +T
Sbjct: 1206 GQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------VT 1238

Query: 379  NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            N+ +   S  K      ++F KL  K+LVSWN MI  Y  N    EA++ F +M    + 
Sbjct: 1239 NTCLDNVSFVK------EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVD 1292

Query: 439  PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            PD+ ++ SV+PA  +LS +   + IH  V+R   + N+ +  ALIDMYAKCG +  AR +
Sbjct: 1293 PDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREV 1352

Query: 499  FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
            FD M  R V +W  MI  YG +G G+ AV LF++M +    P+ I F+  +SACSH+GL+
Sbjct: 1353 FDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLL 1412

Query: 559  EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            +EG +YF  + ++  I P ++H+  MVDLLGRAG+++EA+ FI++MP+EP   V+GA+L 
Sbjct: 1413 DEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 1472

Query: 619  ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
            AC+++ N+ +G  AA++LF+L P++ GY+VLL+NIYA A  W+ +  VR+IM+ KG++K 
Sbjct: 1473 ACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKM 1532

Query: 679  PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQ 737
            PG S  EL N VH+F +G   HPQSK+IY  L+ L+ ++K AGYVP+T+S +HDVE+  +
Sbjct: 1533 PGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDK 1592

Query: 738  ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
            E  L+ HSEKLAIAF +LN++PGS I I KNLRVCGDCH A K IS + GREI +RD +R
Sbjct: 1593 ECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNR 1652

Query: 798  FHCFKNGVCSCGDYW 812
            FH F NGVCSCGDYW
Sbjct: 1653 FHHFYNGVCSCGDYW 1667



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 51/459 (11%)

Query: 94   VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
            +F+ IP K    ++ M++ Y       DA+     M    + P  Y Y  +LK      +
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 1141

Query: 154  IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
            +  G +IH  ++  G  L++F   G+++MY KCG + EA ++ D MP RD+VSWN++VAG
Sbjct: 1142 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAG 1201

Query: 214  FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
             A+NG  + AL++   M   G + D  T+ S+LPAV N                     +
Sbjct: 1202 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT-------------------CL 1242

Query: 274  VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
             NVS  + +M+ K             + ++++VSWN MIA Y+    P EA+ IF +M D
Sbjct: 1243 DNVSF-VKEMFMK-------------LANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 1288

Query: 334  QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
              V+P  ++I   L AC DL  L  G  +H+ + + +L  ++ + N+LI MY+KC  ++ 
Sbjct: 1289 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 1348

Query: 394  AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
            A ++F +++ + +VSW +MI  Y  NG+  +A++ F +M+   + PDS   VSV+ A + 
Sbjct: 1349 AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 1408

Query: 454  LSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMM----NERHVT 508
              ++   ++   L+   C     +     ++D+  + G V  A      M    NER   
Sbjct: 1409 AGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER--- 1465

Query: 509  TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
             W  ++          +A  +++ M+ G    + +  LC
Sbjct: 1466 VWGALL----------SACRVYSNMIIGLLAADQLFQLC 1494



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 34/333 (10%)

Query: 63   IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            +++ GL         L+S++ K   L +A RV + +P +    +++++ G A+    DDA
Sbjct: 1152 VVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDA 1211

Query: 123  VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            +     M    + P       LL                    V    LD          
Sbjct: 1212 LEVCKEMELLGLKPDAGTMASLLPA------------------VTNTCLD---------- 1243

Query: 183  YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
                  +    +MF ++  + LVSWN ++A +  N     A+D+  +M +     D I+I
Sbjct: 1244 -----NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISI 1298

Query: 243  VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             S+LPA  ++ +L +G+ +H Y +R      + +  AL+DMYAKCG +E AR VFD MK 
Sbjct: 1299 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 1358

Query: 303  RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            R+VVSW SMI+AY   G   +A+ +F +M D G+ P ++  +  L AC+  G L+ G + 
Sbjct: 1359 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYY 1418

Query: 363  HKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRA 394
             KL+ ++ K+   +     ++ +  +  +VD A
Sbjct: 1419 FKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 1451



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 10/235 (4%)

Query: 86   NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
            +++S    +F  + +K    ++ M+  Y   +   +AV   ++M    V P   +   +L
Sbjct: 1243 DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 1302

Query: 146  KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
              CGD+  +  G+ IH  ++      +L     +++MYAKCG +E A ++FD+M  RD+V
Sbjct: 1303 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 1362

Query: 206  SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
            SW ++++ +  NG    A+ L +RM + G   D I  VS+L A ++ G L  G+    Y 
Sbjct: 1363 SWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR----YY 1418

Query: 266  MRAGFDSIVNVS-----TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
             +   +    V        +VD+  + G+V+ A      M    N   W ++++A
Sbjct: 1419 FKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 7/176 (3%)

Query: 44   ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            A +L  C  L  L   RRI   +++  L    L +  L+ ++ K   L  A  VF+ +  
Sbjct: 1299 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 1358

Query: 101  KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            +    + +M+  Y       DAVS   RM+   + P    +  +L  C   G +  G+  
Sbjct: 1359 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR-Y 1417

Query: 161  HGQLIVNGFSL--DLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
            + +L+     +   +     +V++  + GQ++EAY    +MP E +   W  +++ 
Sbjct: 1418 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/699 (37%), Positives = 416/699 (59%), Gaps = 42/699 (6%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIV 211
           +R+ K+ H  +I  G   D ++ + +  + A      +E A K+FD +P+ +  +WNT++
Sbjct: 44  LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLI 103

Query: 212 AGFAQNGFAELA----LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
             +A       +    LD+V+   E     +  T   ++ A A V SL +G+++HG A++
Sbjct: 104 RAYASGPDPVCSIWAFLDMVSS--ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIK 161

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +   S V V+ +L+  Y  CG +++A  VF  +K ++VVSWNSMI  +V+ G+P++A+ +
Sbjct: 162 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 221

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F+KM  + V+ ++VT++  L ACA + DLE G  V   +++ ++  ++++ N+++ MY+K
Sbjct: 222 FKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTK 281

Query: 388 CKKVDRAADIFSKLQ-------------------------------GKTLVSWNAMILGY 416
           C  ++ A  +F  ++                                K +V+WNA+I  Y
Sbjct: 282 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAY 341

Query: 417 AQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            QNG+ NEAL  F +++  KNIK +  T+VS + A A++  +   +WIH+ + ++  + N
Sbjct: 342 EQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMN 401

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            +V +ALI MY+KCG +  AR +F+ + +R V  W+ MI G   HG G  AV++F KM E
Sbjct: 402 FYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQE 461

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              KPN +TF     ACSH+GLV+E    F  ++  YGI P   HY  +VD+LGR+G L 
Sbjct: 462 ANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLE 521

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           +A  FI+ MPI P  +V+GA+LGACKIH N+ L E A  RL EL+P   G HVLL+NIYA
Sbjct: 522 KAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYA 581

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
            +  WD ++++R  M   GL+K PGCS +E+   +H F SG   HP S+++Y  L  +++
Sbjct: 582 KSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 641

Query: 716 EIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
           ++K+ GY P+ + +  +  E+ ++E  L+ HSEKLAI +GL+++     I + KNLR+CG
Sbjct: 642 KLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCG 701

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH   K IS +  REIIVRD +RFH F+NG CSC D+W
Sbjct: 702 DCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 252/487 (51%), Gaps = 53/487 (10%)

Query: 12  FTN-STPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCD 70
           F+N + PT      +HT+S                L++ C+SL++L++    +I++G+  
Sbjct: 18  FSNPNQPTTNNERSRHTIS----------------LIDRCSSLRQLKQTHAHMIRTGMFS 61

Query: 71  QHLFQTKL--VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
                +KL  ++    + SL  A +VF+ IP      ++T+++ YA       ++   + 
Sbjct: 62  DPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLD 121

Query: 129 MRYDDVA--PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           M   +    P  Y + +L+K   +V  +  G+ +HG  I +    D+F    +++ Y  C
Sbjct: 122 MVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSC 181

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G ++ A K+F  + E+D+VSWN+++ GF Q G  + AL+L  +M  E  +   +T+V +L
Sbjct: 182 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 241

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS---- 302
            A A +  L  G+ V  Y      +  + ++ A++DMY KCG +E A+ +FD M+     
Sbjct: 242 SACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 301

Query: 303 ---------------------------RNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQ 334
                                      +++V+WN++I+AY + G P EA+ +F ++ L +
Sbjct: 302 TWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 361

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            ++   +T++  L ACA +G LE G ++H  + +  +  +  +T++LI MYSKC  +++A
Sbjct: 362 NIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKA 421

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            ++F+ ++ + +  W+AMI G A +G  +EA++ F KM+  N+KP+  T  +V  A +  
Sbjct: 422 REVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 481

Query: 455 SVIRYAK 461
            ++  A+
Sbjct: 482 GLVDEAE 488


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/570 (44%), Positives = 363/570 (63%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++L     +G L+ GK VH + + + F   + +  +L+ MYA+CG +E AR +FD M  R
Sbjct: 79  TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHR 138

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++VSW SMI  Y +     +A+ +F +ML  G EP   T+   +  C  +     G  +H
Sbjct: 139 DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIH 198

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
               +    ++V + +SL+ MY++C  +  A  +F KL  K  VSWNA+I GYA+ G   
Sbjct: 199 ACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGE 258

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EAL  F +M+ +  +P  FT  +++ + + +  +   KW+HA +++S  +   +V   L+
Sbjct: 259 EALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLL 318

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MYAK G++  A  +FD + +  V + N M+ GY  HGLGK A + F++M+    +PNDI
Sbjct: 319 HMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDI 378

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFL  ++ACSH+ L++EG HYF  ++K Y IEP + HY  +VDLLGRAG L++A  FI++
Sbjct: 379 TFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEE 437

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MPIEP + ++GA+LGA K+HKN E+G  AA R+FELDP   G H LLANIYA+A  W+ +
Sbjct: 438 MPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDV 497

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           AKVR IM+  G++K P CS VE++N VH F +    HPQ ++I+   E L  +IK  GYV
Sbjct: 498 AKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYV 557

Query: 724 PDTNSIHDVEDYVQENL-LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PDT+ +    D  ++ L L  HSEKLA++F LLN+ PGSTI I KN+RVCGDCH+A KY+
Sbjct: 558 PDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYV 617

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           SLV  REIIVRD +RFH F +G CSCGDYW
Sbjct: 618 SLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 225/437 (51%), Gaps = 5/437 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LLK C  +G+++ GK +H  ++ + F  DL     ++ MYA+CG +E A ++FD MP
Sbjct: 77  YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP 136

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD+VSW +++ G+AQN  A  AL L  RM  +G   +  T+ S++     + S   G+ 
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    + G  S V V ++LVDMYA+CG +  A LVFD +  +N VSWN++IA Y   G 
Sbjct: 197 IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGE 256

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ +F +M  +G  PT  T    L +C+ +G LE+G ++H  L +        + N+
Sbjct: 257 GEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNT 316

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K   +  A  +F KL    +VS N+M++GYAQ+G   EA   F +M    I+P+
Sbjct: 317 LLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPN 376

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             T +SV+ A +   ++   K    L+ +   E  V     ++D+  + G +  A++  +
Sbjct: 377 DITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIE 436

Query: 501 MMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLV 558
            M  E  V  W  ++     H   +       ++ E  P+ P   T L  I A   S   
Sbjct: 437 EMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYA---SAGR 493

Query: 559 EEGIHYFTSLKKDYGIE 575
            E +     + KD G++
Sbjct: 494 WEDVAKVRKIMKDSGVK 510



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 193/372 (51%), Gaps = 4/372 (1%)

Query: 46  LLEVCTSL---KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ CT L   KE + +   ++ S      + Q  L+ ++ +  SL  A R+F+ +P + 
Sbjct: 80  LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRD 139

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ GYA+     DA+    RM  D   P  +  + L+K CG +     G++IH 
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                G   ++F  + +V+MYA+CG + EA  +FD++  ++ VSWN ++AG+A+ G  E 
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L  RM  EG R    T  ++L + +++G L  GK +H + M++    +  V   L+ 
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLH 319

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  A  VFD +   +VVS NSM+  Y + G  +EA + F +M+  G+EP ++T
Sbjct: 320 MYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDIT 379

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+    L+ G     L+ +  +   VS   +++ +  +   +D+A     ++ 
Sbjct: 380 FLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP 439

Query: 403 -GKTLVSWNAMI 413
              T+  W A++
Sbjct: 440 IEPTVAIWGALL 451



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 163/311 (52%), Gaps = 8/311 (2%)

Query: 331 MLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           ++D G +EP        L  C  LG L+ G  VH  +       D+ + NSL+ MY++C 
Sbjct: 64  LIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCG 123

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            ++ A  +F ++  + +VSW +MI GYAQN R ++AL  F +M S   +P+ FT+ S++ 
Sbjct: 124 SLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVK 183

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
               ++     + IHA   +     NVFV ++L+DMYA+CG +G A  +FD +  ++  +
Sbjct: 184 CCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS 243

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN +I GY   G G+ A+ LF +M     +P + T+   +S+CS  G +E+G      L 
Sbjct: 244 WNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLM 303

Query: 570 KDYGIEPVMDHYG-AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           K    + ++ + G  ++ +  ++G + +A     K+ ++  +    +ML     H    L
Sbjct: 304 KSS--QKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL-VKVDVVSCNSMLIGYAQHG---L 357

Query: 629 GEKAANRLFEL 639
           G++AA +  E+
Sbjct: 358 GKEAAQQFDEM 368


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/714 (38%), Positives = 412/714 (57%), Gaps = 35/714 (4%)

Query: 134 VAPVVYN---YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           V+P  +N   Y   L+ C    E  RGK +H +++  G  LDLFA   ++NMY K   + 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           +A K+FD MPER+ +S+ T++ G+A++     A++L  R+H EG   +     +IL  + 
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           +     +G  +H    + G +S   V TAL+D Y+ CGRV+ AR VFDG+  +++VSW  
Sbjct: 151 STDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTG 210

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           M+  + E    +EA+++F +M   G +P N T      AC  L   + G  VH    + +
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              D+ +  +L+ +Y+K   +D A   F ++  K ++ W+ MI  YAQ+ +  EA+  F 
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           +MR   + P+ FT  SV+ A A +  +     IH  VI+     +VFV  AL+D+YAKCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG-------------- 536
            +  +  LF     R+  TWN +I G+   G G+ A+ LF  MLE               
Sbjct: 391 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450

Query: 537 -----------------PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
                              KP+ +TF+  +SAC+++GL+++G  YFTS+ +D+GIEP ++
Sbjct: 451 ACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 510

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  MV LLGR G L++A   I ++P +P + V+ A+LGAC IH ++ELG  +A R+ E+
Sbjct: 511 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 570

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +P +   HVLL+N+YA A  WD +A VR  M++KG++K PG S +E +  VHSF  G T 
Sbjct: 571 EPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTS 630

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HP+ + I   LE L  + K AGY+P+ N +  DVED  +E LL  HSE+LA++FG++ + 
Sbjct: 631 HPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTP 690

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GS I I KNLR+C DCH A K IS V  REI+VRD++RFH F+ G+CSCGDYW
Sbjct: 691 SGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 274/537 (51%), Gaps = 19/537 (3%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           PS    H  A  L+ C    E  R   L   I+K G C        L++++ K + L DA
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCG 149
           +++F+ +P++    + T+++GYA+     +A+   +R+  +  ++ P V+     L V  
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVST 152

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           D GE+  G  IH  +   G   + F  T +++ Y+ CG+++ A ++FD +  +D+VSW  
Sbjct: 153 DCGELGWG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTG 210

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V  FA+N   + AL L ++M   G + +  T  S+  A   + +  +GK+VHG A+++ 
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           ++  + V  AL+D+Y K G ++ AR  F+ +  ++V+ W+ MIA Y +    +EA+ +F 
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M    V P   T    L ACA +  L  G  +H  + ++ L +DV ++N+L+ +Y+KC 
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +++ + ++F++   +  V+WN +I+G+ Q G   +AL  F  M    ++    T  S + 
Sbjct: 391 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH--- 506
           A A L+ +     IH+L ++   +K  FV   ++   A  G +   +A F  M + H   
Sbjct: 451 ACASLAALEPGLQIHSLTVKP--DKLTFV--GVLSACANAGLLDQGQAYFTSMIQDHGIE 506

Query: 507 --VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
             +  +  M+   G  G    AV+L +++   P +P+ + +   + AC     +E G
Sbjct: 507 PCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELG 560


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/728 (36%), Positives = 421/728 (57%), Gaps = 5/728 (0%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           + +AA  F  +      L++ M++G+A      DA++    M      P  + +  +LK 
Sbjct: 70  MDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKC 129

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C   G +  G+  H  +I  G   D++    +V +YAK G + +A ++FD MP RD+VSW
Sbjct: 130 CARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSW 189

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAM 266
           NT+V G+  NG   LAL     M++  + G D + +++ L A     +L +G+ +HGYA+
Sbjct: 190 NTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAI 249

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           R G +  V V T+LVDMY KCG V  A  VF  M  R VV+WN MI  Y     P +A  
Sbjct: 250 RHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFD 309

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
            F +M   G +   VT +  L ACA       G  VH  + +      V +  +L+ MY 
Sbjct: 310 CFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYG 369

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           K  KV+ +  IF ++  KTLVSWN MI  Y       EA+  F ++ ++ + PD FTM +
Sbjct: 370 KVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTT 429

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+PA   L  IR  K +H+ +++  +  +  +M A++ MYA+CG +  +R +FD M  + 
Sbjct: 430 VVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKD 489

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           V +WN +I GY  HG GK A+E+F++M     +PN+ TF+  ++ACS SGL  EG   F 
Sbjct: 490 VISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFN 549

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           S++++YG+ P ++HYG M DLLGRAG L E   FI+ MPI P   ++G++L A +   ++
Sbjct: 550 SMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDI 609

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           ++ E AA R+F+L+ +  G +V+L+++YA A  W+ + ++R++M++KGL++T   SLVEL
Sbjct: 610 DIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVEL 669

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQEN--LLSSH 744
            N+  SF +G   HPQS++I+ F + L   I     +  ++++ D + +      L + H
Sbjct: 670 NNKECSFVNGDMSHPQSEKIHEFSDILSRNIGED--LDSSSNLRDSDPFASSTTVLPNKH 727

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           S +LA+AFGL++S  GS + ++KN+RVC  CH+A K IS  +GR+I+V D   +H F +G
Sbjct: 728 SVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDG 787

Query: 805 VCSCGDYW 812
            C CGDYW
Sbjct: 788 SCCCGDYW 795



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 36  SRIYRHPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           +R  R    ++L+ C    +L E R     +IK GL         LV+L+ K   + DA 
Sbjct: 116 ARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAE 175

Query: 93  RVFEPIPDKLDALYHTMLKGY----------AKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           RVF+ +P +    ++TM+ GY          A F  ++DA    +++ +D V  +     
Sbjct: 176 RVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDA----LQVGHDSVGVIA---- 227

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
             L  C     +  G+EIHG  I +G   D+   T +V+MY KCG +  A  +F +MP R
Sbjct: 228 -ALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR 286

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
            +V+WN ++ G+A N     A D   +M  +G + + +T +++L A A   S   G++VH
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVH 346

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            Y +R  F   V + TAL++MY K G+VE++  +F  +  + +VSWN+MIAAY+     +
Sbjct: 347 AYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQ 406

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ +F ++L+Q + P   T+   + A   LG + +   +H  + +L  G    + N+++
Sbjct: 407 EAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVM 466

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY++C  +  + +IF K+ GK ++SWN +I+GYA +G+   AL  F +M+   ++P+  
Sbjct: 467 HMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNES 526

Query: 443 TMVSVIPA 450
           T VSV+ A
Sbjct: 527 TFVSVLTA 534



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 213/422 (50%), Gaps = 6/422 (1%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G+++EA   F  +        N ++ GFA       AL     M + G R D  T   +L
Sbjct: 68  GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
              A  G+L  G+A H   ++ G  + V  + +LV +YAK G V  A  VFDGM +R++V
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           SWN+M+  YV  G    A+  F++M D   V   +V ++ AL AC     L  G  +H  
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +  L  DV +  SL+ MY KC  V  A ++F+K+  +T+V+WN MI GYA N R  +A
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
            + F +MR    + +  T ++++ A A+     + + +HA V+R  F  +V + TAL++M
Sbjct: 308 FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEM 367

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y K G V ++  +F  + ++ + +WN MI  Y    + + A+ LF ++L  P  P+  T 
Sbjct: 368 YGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTM 427

Query: 546 LCAISACSHSGLVEE--GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
              + A    G + +   +H +  +K  YG   ++    A++ +  R G +  + +   K
Sbjct: 428 TTVVPAFVLLGSIRQCKQMHSYI-VKLGYGDSTLI--MNAVMHMYARCGNIVASREIFDK 484

Query: 604 MP 605
           MP
Sbjct: 485 MP 486



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 149/298 (50%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R I    I+ GL       T LV ++CK  ++  A  VF  +P +    ++ M+ GYA  
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA    ++MR D     V     LL  C        G+ +H  ++   F   +   
Sbjct: 302 ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLE 361

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           T ++ MY K G++E + K+F ++ ++ LVSWN ++A +      + A+ L   +  +   
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY 421

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D+ T+ +++PA   +GS+R  K +H Y ++ G+     +  A++ MYA+CG +  +R +
Sbjct: 422 PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREI 481

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           FD M  ++V+SWN++I  Y   G  + A+ +F +M   G+EP   T +  L AC+  G
Sbjct: 482 FDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 6/322 (1%)

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +L+  +   GR++ A   F G+        N MI  + +   P +A+  ++ MLD G  P
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
              T    L  CA  G L  G   H  + +L LG DV   NSL+++Y+K   V  A  +F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVI 457
             +  + +VSWN M+ GY  NG    AL  F +M     +  DS  +++ + A    S +
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              + IH   IR   E++V V T+L+DMY KCG V  A  +F  M  R V TWN MI GY
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTSLKKDYGIE 575
             +     A + F +M     +   +T +  ++AC+   S L    +H +  +++ +   
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYV-VRRHFLPH 357

Query: 576 PVMDHYGAMVDLLGRAGRLNEA 597
            V++   A++++ G+ G++  +
Sbjct: 358 VVLET--ALLEMYGKVGKVESS 377



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 7/247 (2%)

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S   SLI  +    ++D AAD F+ +        N MI G+A      +AL  +  M   
Sbjct: 55  SRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDA 114

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             +PD FT   V+   A    +   +  HA VI+     +V+   +L+ +YAK G VG A
Sbjct: 115 GARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDA 174

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND-ITFLCAISACSH 554
             +FD M  R + +WN M+DGY ++G+G  A+  F +M +     +D +  + A++AC  
Sbjct: 175 ERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCL 234

Query: 555 SGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
              +  G  IH +      +G+E  +    ++VD+  + G +  A +   KMP+   +T 
Sbjct: 235 ESALALGREIHGYA---IRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVT- 290

Query: 613 FGAMLGA 619
           +  M+G 
Sbjct: 291 WNCMIGG 297



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 30/160 (18%), Positives = 69/160 (43%), Gaps = 4/160 (2%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           P+ +LL    S+++ +++   I+K G  D  L    ++ ++ +  ++  +  +F+ +P K
Sbjct: 432 PAFVLL---GSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGK 488

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG-EIRRGKEI 160
               ++T++ GYA       A+     M+   + P    +  +L  C   G E    KE 
Sbjct: 489 DVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEF 548

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +      G    +     + ++  + G++ E  +  + MP
Sbjct: 549 NSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMP 588


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/798 (36%), Positives = 453/798 (56%), Gaps = 30/798 (3%)

Query: 41  HPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H    L+  C+ L  L   RRI   I      +  +    L+S++ K  SL DA + F+ 
Sbjct: 8   HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 67

Query: 98  IP--DKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVG- 152
           +P   K D + ++ M+  + +  S  +A+     M +D   P     +  +L  C + G 
Sbjct: 68  LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGL 127

Query: 153 -EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF----DRMPERDLVSW 207
             +   + IHG+++  G   + F  T +V+ Y K G +++A+++F    D  P   LV+ 
Sbjct: 128 LSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTC 187

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA---VHGY 264
           + +++   QNG+ + +L L   M+ EG +   +T+VS+L A +    L +G A   V   
Sbjct: 188 SAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVGSATAFVLEQ 244

Query: 265 AMRAGFDSIVNV-STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           AM     +  NV  T L+  YA+   +  AR  FD ++S +VVSWN+M AAY++   P E
Sbjct: 245 AMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPRE 304

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER---GIFVHKLLDQLKLGTDVSMTNS 380
           A+ +F++ML +GV P+  T + AL ACA          G  +  LL++  L  D ++ N+
Sbjct: 305 ALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANA 364

Query: 381 LISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNI 437
            ++MY+KC  +  A  +F ++    +  ++WN+M+  Y  +G   EA   F  M + K +
Sbjct: 365 TLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV 424

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+  T V+V+ A    + I   + IHA V+ + FE +  +  AL++MYAKCG++  A+A
Sbjct: 425 KPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQA 484

Query: 498 LFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           +FD    N+  V  W  ++ GY  +G  + A++LF  M +   +PN ITF+ A++AC+H 
Sbjct: 485 IFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHG 544

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G +E+G    + +  D+GI P   H+  +VDLLGR GRL+EA   +++   +  +  + A
Sbjct: 545 GKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMA 603

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L ACK  K +E GE+ A R+ +LDP+    +++LA++YAAA  W++ A +R  M  KG+
Sbjct: 604 LLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGI 663

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +  PGCS VE+  E+HSF +G   HP+S+ IY  LE L   IKAAGYV DT  + HDV  
Sbjct: 664 RADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQ 723

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E LL  HSEKLAIAFGL+++  GS + + KNLRVC DCH ATK IS VTGR+I++RD
Sbjct: 724 EHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRD 783

Query: 795 MHRFHCFKNGVCSCGDYW 812
             R+H F +G CSCGDYW
Sbjct: 784 SSRYHHFTSGTCSCGDYW 801



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 255/488 (52%), Gaps = 18/488 (3%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +V P  +    L+  C  +G +  G+ IH Q+    F  +      +++MY+KCG + +A
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 193 YKMFDRMP---ERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPA 248
            + FDR+P   +RD+V+WN +++ F +NG A  AL L   M H+     + +T VS+L +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 249 VANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF----DGMKS 302
               G  SL   +A+HG  + AG +    V TALVD Y K G ++ A  VF    D   S
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            ++V+ ++MI+A  + G P+E++R+F  M  +G +P+ VT++  L+AC+ L       FV
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 363 -HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
             + ++ +    D  +  +L++ Y++   + RA   F  +Q   +VSWNAM   Y Q+ R
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL---SVIRYAKWIHALVIRSCFEKNVFV 478
             EAL  F +M  + ++P   T ++ + A A     +     K I +L+  +  E +  V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 479 MTALIDMYAKCGAVGTARALFDMMN--ERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LE 535
             A ++MYAKCG++  ARA+F+ ++   R   TWN M+  YG HGLGK A ELF  M  E
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              KPN +TF+  + A +    + +G      +  + G E       A++++  + G L+
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLD 480

Query: 596 EAWDFIQK 603
           +A     K
Sbjct: 481 DAQAIFDK 488


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/734 (39%), Positives = 428/734 (58%), Gaps = 45/734 (6%)

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A++F  RM+   V    + +  LLK C  +  +    ++H  L   G + D F+   +V+
Sbjct: 36  ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVD 95

Query: 182 MYAKCGQIEEAYKMFDRMPER--DLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRG- 237
            Y KCG    A ++FD MPE   D+VSW  +++ ++ NG  + A     RM    G  G 
Sbjct: 96  AYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGS 155

Query: 238 -----DFITIVSILPAVA-NVGS--LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
                D +++ +++ A A   GS  LR G AVHG  ++ GF    ++  ++V MY+ C  
Sbjct: 156 ECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKD 215

Query: 290 VETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG---VEPTNVTIM 344
           V  A  VF+G+  + R+VVSWNS+I+ +   G  E A+R F+ M+ +G   VEP  VT++
Sbjct: 216 VGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVI 275

Query: 345 EALHACADLGDLERGIFVHKLLDQ----LKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             L +CA+LG +E   +VH+ +      L +  DV +  +L+ M+++C  +  A +IF  
Sbjct: 276 ALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDG 335

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN------IKPDSFTMVSVIPALAEL 454
           ++GK +V W+AMI GY Q     EAL  F +M  +       +KP++ T+VSVI A + L
Sbjct: 336 VEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL 395

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNV 512
              R A  IH   + +  +++  + +ALIDM AKCG +   R +F  M+E  R V +W+ 
Sbjct: 396 GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSS 455

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI   G HG GK A+ELF++M  G  +PN+IT++  +SACSH+GLVE+G   F S++KDY
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDY 515

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+ P   HY  +VDLLGRAG L+EA + I  MPI+  + ++G++L AC +H N +LGE  
Sbjct: 516 GMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIV 575

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
             ++  LD +  G+HVLLAN+Y  A  WD + ++R  + + GL+K PG S +E+ NEV+S
Sbjct: 576 EKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYS 635

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTNSIHDVEDYVQENLLSS---HSEKL 748
           F +    HP+S+ IY  L+ L + + KAA YV +T    +VED     L+     HSE+L
Sbjct: 636 FMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL--NVEDGDIAGLIXRCKYHSERL 693

Query: 749 AIAFGLLNSSPGST----------IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
           AIAFGL+     ST          I I KNLRVC DCH  TK +S V  RE+IVRD HRF
Sbjct: 694 AIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRF 753

Query: 799 HCFKNGVCSCGDYW 812
           H F++G CSCGDYW
Sbjct: 754 HHFRDGFCSCGDYW 767



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/482 (31%), Positives = 231/482 (47%), Gaps = 47/482 (9%)

Query: 199 MPERDLVSWNTIVAGFA-QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +  +D   WN+++A  A QN   + AL   TRM       +  T  ++L A A +  L  
Sbjct: 13  ISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAY 315
              VH Y  R G  +    + ALVD Y KCG    A  VFD M   S +VVSW ++I+AY
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 316 VEGGNPEEAMRIFQKML----DQGVEPTNVTIME---ALHACA-DLGD--LERGIFVHKL 365
              G  +EA   F +M       G E   V ++     + ACA   G   L RG  VH L
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS--KLQGKTLVSWNAMILGYAQNGRVN 423
           + +   G    + NS++ MYS CK V  A  +F+   ++ + +VSWN++I G+  NG   
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250

Query: 424 EALNYFCKMRSKN---IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS----CFEKNV 476
            AL  F  M S+    ++P+  T+++++ + AEL  +  + W+H  +          K+V
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-E 535
            V+TAL+DM+A+CG +  AR +FD +  ++V  W+ MI GY      + A+ LF +ML E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 536 G-----PTKPNDITFLCAISACSHSGLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMV 585
           G       KPN +T +  I+ACS  G       IH +   T L +D  I        A++
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIAS------ALI 424

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITV-FGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           D+  + G +        +M       V + +M+GA  IH     G++A     E+    G
Sbjct: 425 DMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFSEMRT--G 479

Query: 645 GY 646
           GY
Sbjct: 480 GY 481



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 21/324 (6%)

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           +T R     +  ++   WNS+IA      NP+ A+  F +M    V   N T    L AC
Sbjct: 4   KTRRWYXCSISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKT-LVS 408
           A L  L   + VH  L +L L  D     +L+  Y KC     AA +F ++ +G   +VS
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 409 WNAMILGYAQNGRVNEALNYFCKMR-------SKNIKPDSFTMVSVIPALA---ELSVIR 458
           W A+I  Y+ NG V+EA   F +MR       S+    D  ++ +++ A A     + +R
Sbjct: 123 WTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDG 516
               +H LV++  F  +  +  +++ MY+ C  VG A  +F+   + +R V +WN +I G
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 517 YGTHGLGKAAVELFNKML-EGPT--KPNDITFLCAISACSHSGLVEEG--IH-YFTSLKK 570
           +  +G  + A+  F  M+ EG +  +PN +T +  + +C+  G VE    +H Y +S   
Sbjct: 243 FXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRL 594
              +   +    A++D+  R G L
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNL 326



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--- 132
           T L+ +  +  +L+ A  +F+ +  K    +  M+ GY + +  ++A+    +M  +   
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 133 ---DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
              +V P       ++  C  +G  R    IH   +  G   D    + +++M AKCG I
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 190 EEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
           E   ++F  M E  R +VSW++++     +G  + AL+L + M   G   + IT +S+L 
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 248 AVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NV 305
           A ++ G +  GK+      +  G          LVD+  + G ++ A  V   M  + ++
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKML 332
             W S++AA    GN +    + +K+L
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKIL 580


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/734 (39%), Positives = 428/734 (58%), Gaps = 45/734 (6%)

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A++F  RM+   V    + +  LLK C  +  +    ++H  L   G + D F+   +V+
Sbjct: 36  ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVD 95

Query: 182 MYAKCGQIEEAYKMFDRMPER--DLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRG- 237
            Y KCG    A ++FD MPE   D+VSW  +++ ++ NG  + A     RM    G  G 
Sbjct: 96  AYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGS 155

Query: 238 -----DFITIVSILPAVA-NVGS--LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
                D +++ +++ A A   GS  LR G AVHG  ++ GF    ++  ++V MY+ C  
Sbjct: 156 ECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKD 215

Query: 290 VETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG---VEPTNVTIM 344
           V  A  VF+G+  + R+VVSWNS+I+ +   G  E A+R F+ M+ +G   VEP  VT++
Sbjct: 216 VGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVI 275

Query: 345 EALHACADLGDLERGIFVHKLLDQ----LKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             L +CA+LG +E   +VH+ +      L +  DV +  +L+ M+++C  +  A +IF  
Sbjct: 276 ALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDG 335

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN------IKPDSFTMVSVIPALAEL 454
           ++GK +V W+AMI GY Q     EAL  F +M  +       +KP++ T+VSVI A + L
Sbjct: 336 VEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL 395

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNV 512
              R A  IH   + +  +++  + +ALIDM AKCG +   R +F  M+E  R V +W+ 
Sbjct: 396 GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSS 455

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI   G HG GK A+ELF++M  G  +PN+IT++  +SACSH+GLVE+G   F S++KDY
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDY 515

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+ P   HY  +VDLLGRAG L+EA + I  MPI+  + ++G++L AC +H N +LGE  
Sbjct: 516 GMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIV 575

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
             ++  LD +  G+HVLLAN+Y  A  WD + ++R  + + GL+K PG S +E+ NEV+S
Sbjct: 576 EKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYS 635

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTNSIHDVEDYVQENLL---SSHSEKL 748
           F +    HP+S+ IY  L+ L + + KAA YV +T    +VED     L+     HSE+L
Sbjct: 636 FMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL--NVEDGDIAGLILRCKYHSERL 693

Query: 749 AIAFGLLNSSPGST----------IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
           AIAFGL+     ST          I I KNLRVC DCH  TK +S V  RE+IVRD HRF
Sbjct: 694 AIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRF 753

Query: 799 HCFKNGVCSCGDYW 812
           H F++G CSCGDYW
Sbjct: 754 HHFRDGFCSCGDYW 767



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 151/482 (31%), Positives = 232/482 (48%), Gaps = 47/482 (9%)

Query: 199 MPERDLVSWNTIVAGFA-QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +  +D   WN+++A  A QN   + AL   TRM       +  T  ++L A A +  L  
Sbjct: 13  ISHKDTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAY 315
              VH Y  R G  +    + ALVD Y KCG    A  VFD M   S +VVSW ++I+AY
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 316 VEGGNPEEAMRIFQKML----DQGVEPTNVTIME---ALHACA-DLGD--LERGIFVHKL 365
              G  +EA + F +M       G E   V ++     + ACA   G   L RG  VH L
Sbjct: 131 SSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS--KLQGKTLVSWNAMILGYAQNGRVN 423
           + +   G    + NS++ MYS CK V  A  +F+   ++ + +VSWN++I G+  NG   
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250

Query: 424 EALNYFCKMRSKN---IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS----CFEKNV 476
            AL  F  M S+    ++P+  T+++++ + AEL  +  + W+H  +          K+V
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-E 535
            V+TAL+DM+A+CG +  AR +FD +  ++V  W+ MI GY      + A+ LF +ML E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 536 G-----PTKPNDITFLCAISACSHSGLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMV 585
           G       KPN +T +  I+ACS  G       IH +   T L +D  I        A++
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIAS------ALI 424

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITV-FGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           D+  + G +        +M       V + +M+GA  IH     G++A     E+    G
Sbjct: 425 DMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFSEMRT--G 479

Query: 645 GY 646
           GY
Sbjct: 480 GY 481



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 21/324 (6%)

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           +T R     +  ++   WNS+IA      NP+ A+  F +M    V   N T    L AC
Sbjct: 4   KTRRWYHCSISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKT-LVS 408
           A L  L   + VH  L +L L  D     +L+  Y KC     AA +F ++ +G   +VS
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 409 WNAMILGYAQNGRVNEALNYFCKMR-------SKNIKPDSFTMVSVIPALA---ELSVIR 458
           W A+I  Y+ NG V+EA   F +MR       S+    D  ++ +++ A A     + +R
Sbjct: 123 WTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDG 516
               +H LV++  F  +  +  +++ MY+ C  VG A  +F+   + +R V +WN +I G
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 517 YGTHGLGKAAVELFNKML-EGPT--KPNDITFLCAISACSHSGLVEEG--IH-YFTSLKK 570
           +  +G  + A+  F  M+ EG +  +PN +T +  + +C+  G VE    +H Y +S   
Sbjct: 243 FTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRL 594
              +   +    A++D+  R G L
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNL 326



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--- 132
           T L+ +  +  +L+ A  +F+ +  K    +  M+ GY + +  ++A+    +M  +   
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 133 ---DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
              +V P       ++  C  +G  R    IH   +  G   D    + +++M AKCG I
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 190 EEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
           E   ++F  M E  R +VSW++++     +G  + AL+L + M   G   + IT +S+L 
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 248 AVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NV 305
           A ++ G +  GK+      +  G          LVD+  + G ++ A  V   M  + ++
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKML 332
             W S++AA    GN +    + +K+L
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKIL 580


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/613 (41%), Positives = 379/613 (61%), Gaps = 23/613 (3%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL+  T M +     D   I S+L A + +   R+GK +HG++++ G  S V V  AL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMI----------------------AAYVEGGN 320
           MY++CG + +ARL+FD M  R+VVSW++MI                      A Y+   +
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EE  R+F +M+++ V P ++T++  + +C  +G ++ G  +H  + +   G  +++  +
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY KC ++  A  IF  ++ K +++W AMI  YAQ   ++ A   F +MR   ++P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             TMVS++   A    +   KW HA + +   E +V + TALIDMYAKCG +  A+ LF 
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
              +R + TWNVM+ GYG HG G+ A++LF +M     KPNDITF+ A+ ACSH+GLV E
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G   F  +  D+G+ P ++HYG MVDLLGRAG L+EA+  I+ MP+ P I ++GAML AC
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           KIHKN  +GE AA  L  L+P   GY VL++NIYAAA+ W+ +A +R  ++  G++K PG
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E+   VH F  G T HP  ++I   L  +  ++K AGY+PDT+ + H++++  +E 
Sbjct: 573 MSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKET 632

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L+ HSEKLA+AFGL++++PG+ I + KNLR+C DCH  TK +S +  R IIVRD +RFH
Sbjct: 633 ALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFH 692

Query: 800 CFKNGVCSCGDYW 812
            F+ G CSCG YW
Sbjct: 693 HFREGSCSCGGYW 705



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 216/416 (51%), Gaps = 24/416 (5%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           MR  D+    +    +LK C  +   R GKEIHG  + NG   D+F +  ++ MY++CG 
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159

Query: 189 IEEAYKMFDRMPERDLVSWNTIVA-------GFAQNGFA---------------ELALDL 226
           +  A  +FD+M ERD+VSW+T++        GF+Q                   E    L
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERL 219

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             RM EE    + IT++S++ +   VG++++GK +H Y +R GF   + ++TALVDMY K
Sbjct: 220 FVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGK 279

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG + +AR +FD MK+++V++W +MI+AY +    + A ++F +M D GV P  +T++  
Sbjct: 280 CGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSL 339

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L  CA  G L+ G + H  +D+  +  DV +  +LI MY+KC  +  A  +FS+   + +
Sbjct: 340 LSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            +WN M+ GY  +G   +AL  F +M +  +KP+  T +  + A +   ++   K +   
Sbjct: 400 CTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEK 459

Query: 467 VIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           +I        V     ++D+  + G +  A  + + M    ++  W  M+     H
Sbjct: 460 MIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 197/396 (49%), Gaps = 29/396 (7%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C+ +   R    I    +K+GL         L+ ++ +  SL  A  +F+ + ++ 
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERD 174

Query: 103 DALYHTMLK----------------------GYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
              + TM++                      GY +   L++     +RM  ++V P    
Sbjct: 175 VVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDIT 234

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
              L+  CG VG ++ GK +H  ++ NGF + L   T +V+MY KCG+I  A  +FD M 
Sbjct: 235 MLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMK 294

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +D+++W  +++ +AQ    + A  L  +M + G R + +T+VS+L   A  G+L +GK 
Sbjct: 295 NKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKW 354

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
            H Y  + G +  V + TAL+DMYAKCG +  A+ +F     R++ +WN M+A Y   G 
Sbjct: 355 FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGY 414

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL--ERGIFVHKLLDQLKLGTDVSMT 378
            E+A+++F +M   GV+P ++T + ALHAC+  G +   +G+F  K++    L   V   
Sbjct: 415 GEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLF-EKMIHDFGLVPKVEHY 473

Query: 379 NSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
             ++ +  +   +D A  +   +     +  W AM+
Sbjct: 474 GCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 165/343 (48%), Gaps = 27/343 (7%)

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           +P  A+  +  M    +E  +  I   L AC+ +     G  +H    +  L +DV + N
Sbjct: 89  HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148

Query: 380 SLISMYSKCKKVDRAADIFSKL----------------------QGKTLVSWNAMILGYA 417
           +L+ MYS+C  +  A  +F K+                        +++VSW AMI GY 
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           +   + E    F +M  +N+ P+  TM+S+I +   +  ++  K +HA ++R+ F  ++ 
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           + TAL+DMY KCG + +ARA+FD M  + V TW  MI  Y        A +LF +M +  
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNG 328

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +PN++T +  +S C+ +G ++ G  +F +     G+E  +    A++D+  + G ++ A
Sbjct: 329 VRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGA 387

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
                +  I+  I  +  M+    +H     GEKA     E++
Sbjct: 388 QRLFSE-AIDRDICTWNVMMAGYGMHG---YGEKALKLFTEME 426


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/754 (36%), Positives = 425/754 (56%), Gaps = 46/754 (6%)

Query: 68  LCDQHLFQTK-----LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           L DQ  ++ K     ++S +    +L +A ++F   P K    + +++ GY K     + 
Sbjct: 59  LFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEG 118

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +    +M  D   P  Y    +L+ C  +  +  GK IH   I      ++F  TG+V+M
Sbjct: 119 LRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDM 178

Query: 183 YAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           Y+KC  + EA  +F  +P+R + V W  ++ G+AQNG +  A+     M  +G   +  T
Sbjct: 179 YSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFT 238

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             SIL A  ++ +   G+ VHG  + +GF   V V +ALVDMYAKCG + +AR++ D M+
Sbjct: 239 FPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VV WNSMI   V  G  EEA+ +F KM ++ +   + T    L + A   +L+ G  
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES 358

Query: 362 VHKLLDQLKLGTDV--SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           VH L   +K G D   +++N+L+ MY+K   +  A D+F+K+  K ++SW +++ GY  N
Sbjct: 359 VHSL--TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHN 416

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   +AL  FC MR+  +  D F +  V  A AEL+VI + + +HA  I+S     +   
Sbjct: 417 GFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE 476

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            +LI MYAKCG +  A  +FD M  R+V +W  +I GY                      
Sbjct: 477 NSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGY---------------------- 514

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
                        + +GLVE G  YF S++K YGI+P  DHY  M+DLLGRAG++NEA  
Sbjct: 515 -------------AQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEH 561

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            + +M +EP  T++ ++L AC++H N+ELGE+A   L +L+P     +VLL+N+++ A  
Sbjct: 562 LLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGR 621

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W+  A +R  M+  G+ K PG S +E+K++VH+F S    HP +  IY+ ++ ++  IK 
Sbjct: 622 WEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKE 681

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AG+VPD N ++ D+++  +E  L+ HSEKLA+AFGLL  + G+ I I KNLRVCGDCH+A
Sbjct: 682 AGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSA 741

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KYIS +  R II+RD++ FH F  G CSCGD+W
Sbjct: 742 MKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 181/363 (49%), Gaps = 39/363 (10%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA------------ 324
           S  L+   +K GRV+ AR +FD M  R+  +WN MI+AY   GN  EA            
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99

Query: 325 -------------------MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
                              +R F +M   G +P+  T+   L AC+ L  L  G  +H  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNE 424
             +++L  ++ +   L+ MYSKCK +  A  +F  L   K  V W AM+ GYAQNG   +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A+  F +MR++ ++ + FT  S++ A   +S   + + +H  +I S F  NV+V +AL+D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG + +AR + D M    V  WN MI G  THG  + A+ LF+KM     + +D T
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 545 F---LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           +   L ++++C +   + E +H   SL    G +       A+VD+  + G L+ A D  
Sbjct: 340 YPSVLKSLASCKNLK-IGESVH---SLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVF 395

Query: 602 QKM 604
            K+
Sbjct: 396 NKI 398



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 15/357 (4%)

Query: 34  IPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           + S  +  PS  +L  CTS+      R++   II SG       Q+ LV ++ K   L+ 
Sbjct: 232 MESNHFTFPS--ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLAS 289

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  + + +       +++M+ G      +++A+    +M   D+    + Y  +LK    
Sbjct: 290 ARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 349

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
              ++ G+ +H   I  GF         +V+MYAK G +  A  +F+++ ++D++SW ++
Sbjct: 350 CKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSL 409

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           V G+  NGF E AL L   M       D   +  +  A A +  +  G+ VH   +++  
Sbjct: 410 VTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSA 469

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            S+++   +L+ MYAKCG +E A  VFD M++RNV+SW ++I  Y + G  E     F+ 
Sbjct: 470 GSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFES 529

Query: 331 MLD-QGVEPTN---VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           M    G++P +     +++ L     + + E       LL+++ +  D ++  SL+S
Sbjct: 530 MEKVYGIKPASDHYACMIDLLGRAGKINEAEH------LLNRMDVEPDATIWKSLLS 580



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 8/282 (2%)

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           KL DQ+    D    N +IS Y+    +  A  +F++   K  ++W++++ GY +NG   
Sbjct: 58  KLFDQMPY-RDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEV 116

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           E L  F +M S   KP  +T+ SV+ A + LS++   K IH   I+   E N+FV T L+
Sbjct: 117 EGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLV 176

Query: 484 DMYAKCGAVGTARAL-FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           DMY+KC  +  A  L F + + ++   W  M+ GY  +G    A++ F +M     + N 
Sbjct: 177 DMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNH 236

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            TF   ++AC+       G      +    G  P +    A+VD+  + G L  A   + 
Sbjct: 237 FTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQSALVDMYAKCGDLASARMILD 295

Query: 603 KMPIEPGITVFGAMLGACKIHKNVE----LGEKAANRLFELD 640
            M I+  +  + +M+  C  H  +E    L  K  NR   +D
Sbjct: 296 TMEIDD-VVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRID 336


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/767 (36%), Positives = 446/767 (58%), Gaps = 12/767 (1%)

Query: 56   LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAK 115
            L ++L  I KSG        + LV+ F +Y  +  A  +F+ + D+     + ++ G A+
Sbjct: 370  LEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLAR 429

Query: 116  FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI----RRGKEIHGQLIVNGFSL 171
                ++A      M+ D V     +   LL    +   +    R+G+E+H  L  +G   
Sbjct: 430  QHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD 488

Query: 172  DLFAM-TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
               ++   +VNMY KC  I+ A  +F  MP +D VSWN++++G   N   E A+     M
Sbjct: 489  ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548

Query: 231  HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
               G      +++S L + +++G L +G+ +HG   + G D  V+VS AL+ +YA+   +
Sbjct: 549  KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 608

Query: 291  ETARLVFDGMKSRNVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
               + VF  M   + VSWNS I A  +   +  +A++ F +M+  G  P  VT +  L A
Sbjct: 609  NECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668

Query: 350  CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVS 408
             +    L  G  +H L+ +  +  D ++ N+L++ Y KC++++    IFS++ + +  VS
Sbjct: 669  VSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVS 728

Query: 409  WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
            WN+MI GY  +G +++A++    M  +  K D FT  +V+ A A ++ +     +HA  +
Sbjct: 729  WNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV 788

Query: 469  RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            R+C E +V V +AL+DMYAKCG +  A   F++M  R++ +WN MI GY  HG G+ A++
Sbjct: 789  RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALK 848

Query: 529  LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
            +F +M +    P+ +TF+  +SACSH GLV+EG  +F S+ + YG+ P ++H+  MVDLL
Sbjct: 849  IFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLL 908

Query: 589  GRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNVELGEKAANRLFELDPDEGGY 646
            GRAG + +  DFI+ MP++P I ++  +LGAC     +N ELG++AA  L EL+P     
Sbjct: 909  GRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVN 968

Query: 647  HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
            +VLL+N++AA   W+ + + R  M K  ++K  GCS V +K+ VH F +G   HP+ ++I
Sbjct: 969  YVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKI 1028

Query: 707  YTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
            Y  L+ L+++I+ AGYVP+T  +++D+E   +E LLS HSEKLAIAF L   S    I I
Sbjct: 1029 YEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRI 1087

Query: 766  RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             KNLRVCGDCH A KYIS + GR+II+RD +RFH F  G+CSCGDYW
Sbjct: 1088 MKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 280/568 (49%), Gaps = 23/568 (4%)

Query: 1   MSSHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRIL 60
           M+SH   +L    NST T  L  +  + SQ   + S   R+ ++      +SL +   + 
Sbjct: 111 MASHLFMRLLNKYNSTYT-FLRHYTFSHSQLQQLDSEFDRYKTS------SSLYDANHLH 163

Query: 61  PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
             + K+G  D   F   L++++ +  +L  A ++F+ +P K    +  ++ GY +    D
Sbjct: 164 LQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPD 223

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTG 178
           +A S    +    + P  +     L+ C   G   I+ G +IH  +       D+     
Sbjct: 224 EACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNV 283

Query: 179 VVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--- 234
           +++MY+ C G I++A+++FD +  R+ V+WN+I++ + + G A  A  L + M  EG   
Sbjct: 284 LMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL 343

Query: 235 -RRGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             R +  T+ S++ A  ++    L + + +     ++GF   + V +ALV+ +A+ G ++
Sbjct: 344 NLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMD 403

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A+++F  M  RN V+ N ++         EEA ++F++M D  VE  + +++  L    
Sbjct: 404 CAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFT 462

Query: 352 DLGDLE----RGIFVHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           +  +L+    +G  VH  L +  L    +S+ N+L++MY KC  +D A  +F  +  K  
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT 522

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSWN+MI G   N R  EA++ F  M+   + P +F+++S + + + L  +   + IH  
Sbjct: 523 VSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGE 582

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK-A 525
             +   + +V V  AL+ +YA+  ++   + +F  M E    +WN  I     +      
Sbjct: 583 GFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQ 642

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACS 553
           A++ F +M++   +PN +TF+  ++A S
Sbjct: 643 ALKYFLEMMQAGWRPNRVTFINILAAVS 670



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 229/460 (49%), Gaps = 16/460 (3%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H QL   GF+ D+F    ++N+Y + G +  A K+FD MP+++LVSW+ +++G+ QN  
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDSIVNVS 277
            + A  L   +   G   +   + S L A    GS  +++G  +H +  +    S + +S
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281

Query: 278 TALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             L+ MY+ C G ++ A  VFD +K RN V+WNS+I+ Y   G+   A ++F  M  +GV
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341

Query: 337 E----PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKK 390
           E    P   T+   + A   L D    +    L    K G   D+ + ++L++ +++   
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +D A  IF ++  +  V+ N +++G A+  +  EA   F +M+   ++ +S ++V ++  
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLST 460

Query: 451 LAELSVI----RYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
             E S +    R  + +HA + RS   +  + +  AL++MY KC A+  A ++F +M  +
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK 520

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
              +WN MI G   +   + AV  F+ M      P++ + +  +S+CS  G +  G    
Sbjct: 521 DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIH 580

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
               K +G++  +    A++ L      +NE      +MP
Sbjct: 581 GEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 195/374 (52%), Gaps = 20/374 (5%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL     +H    + GF   V     L+++Y + G + +AR +FD M  +N+VSW+ +I+
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD--LERGIFVHKLLDQLKL 371
            Y +   P+EA  +F+ ++  G+ P +  +  AL AC   G   ++ G+ +H  + +L  
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274

Query: 372 GTDVSMTNSLISMYSKCK-KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
            +D+ ++N L+SMYS C   +D A  +F +++ +  V+WN++I  Y + G    A   F 
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334

Query: 431 KMRSK----NIKPDSFTMVSVIPA---LAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            M+ +    N++P+ +T+ S++ A   LA+  ++   + +   + +S F ++++V +AL+
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQML-TRIEKSGFLRDLYVGSALV 393

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           + +A+ G +  A+ +F  M +R+  T N ++ G      G+ A ++F +M +   + N  
Sbjct: 394 NGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSE 452

Query: 544 TFLCAISACSHSGLVEEG------IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           + +  +S  +    ++EG      +H +  L +   ++  +    A+V++ G+   ++ A
Sbjct: 453 SLVVLLSTFTEFSNLKEGKRKGQEVHAY--LFRSGLVDARISIGNALVNMYGKCTAIDNA 510

Query: 598 WDFIQKMPIEPGIT 611
               Q MP +  ++
Sbjct: 511 CSVFQLMPSKDTVS 524


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/699 (37%), Positives = 416/699 (59%), Gaps = 43/699 (6%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIV 211
           +R+ K+ HG +I  G   D ++ + +  M A      +E A K+FD +P+ +  +WNT++
Sbjct: 43  LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102

Query: 212 AGFAQNGFAELA----LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
             +A      L+    LD+V+   E     +  T   ++ A A V SL +G+++HG A++
Sbjct: 103 RAYASGPDPVLSIWAFLDMVS---ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +   S V V+ +L+  Y  CG +++A  VF  +K ++VVSWNSMI  +V+ G+P++A+ +
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F+KM  + V+ ++VT++  L ACA + +LE G  V   +++ ++  ++++ N+++ MY+K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279

Query: 388 CKKVDRAADIFSKLQ-------------------------------GKTLVSWNAMILGY 416
           C  ++ A  +F  ++                                K +V+WNA+I  Y
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339

Query: 417 AQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            QNG+ NEAL  F +++  KN+K +  T+VS + A A++  +   +WIH+ + +     N
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             V +ALI MY+KCG +  +R +F+ + +R V  W+ MI G   HG G  AV++F KM E
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              KPN +TF     ACSH+GLV+E    F  ++ +YGI P   HY  +VD+LGR+G L 
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           +A  FI+ MPI P  +V+GA+LGACKIH N+ L E A  RL EL+P   G HVLL+NIYA
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
               W+ ++++R  M   GL+K PGCS +E+   +H F SG   HP S+++Y  L  +++
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 639

Query: 716 EIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
           ++K+ GY P+ + +  +  E+ ++E  L+ HSEKLAI +GL+++     I + KNLRVCG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH+  K IS +  REIIVRD +RFH F+NG CSC D+W
Sbjct: 700 DCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 255/491 (51%), Gaps = 43/491 (8%)

Query: 9   LSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGL 68
           +++F+ + P         +   +    +   RH S  L+E C SL++L++    +I++G 
Sbjct: 1   MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHIS--LIERCVSLRQLKQTHGHMIRTGT 58

Query: 69  CDQHLFQTKLVSL--FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV--- 123
                  +KL ++     + SL  A +VF+ IP      ++T+++ YA   S  D V   
Sbjct: 59  FSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA---SGPDPVLSI 115

Query: 124 -SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            +FL  +      P  Y + +L+K   +V  +  G+ +HG  + +    D+F    +++ 
Sbjct: 116 WAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHC 175

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y  CG ++ A K+F  + E+D+VSWN+++ GF Q G  + AL+L  +M  E  +   +T+
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK- 301
           V +L A A + +L  G+ V  Y      +  + ++ A++DMY KCG +E A+ +FD M+ 
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295

Query: 302 ------------------------------SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
                                          +++V+WN++I+AY + G P EA+ +F ++
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355

Query: 332 -LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
            L + ++   +T++  L ACA +G LE G ++H  + +  +  +  +T++LI MYSKC  
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++++ ++F+ ++ + +  W+AMI G A +G  NEA++ F KM+  N+KP+  T  +V  A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475

Query: 451 LAELSVIRYAK 461
            +   ++  A+
Sbjct: 476 CSHTGLVDEAE 486


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/691 (38%), Positives = 394/691 (57%), Gaps = 39/691 (5%)

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYA 184
           L R+R+D +   V++      +      I+   ++H ++++N    +D      ++  Y+
Sbjct: 23  LTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYS 82

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
             G+   A  +FDR  E+++V +N ++  +  N     AL +   M       D  T   
Sbjct: 83  AQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPC 142

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L A + + +LR+G  VH   ++ G D+ + +  ALV MY KCG +  AR V D M  R+
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRD 202

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSWNSM+A Y + G  ++A+ I ++M                                 
Sbjct: 203 VVSWNSMVAGYAQSGQFDDALEICKEM--------------------------------- 229

Query: 365 LLDQLKLGTDVSMTNSL--ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             D L L  D     SL  +  Y+  + V    ++F ++  K L+SWN MI  Y  N   
Sbjct: 230 --DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           NEA++ F +M    +KPD+ T+ S++PA  +LS +   + +H  + +   + N+ +  AL
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENAL 347

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           +DMYAKCG +  AR +FD M  R V +W  M+  YG  G G  AV LF KML+    P+ 
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           I F+  +SACSH+GL+++G HYF  + + YGI P ++H+  MVDL GRAG + EA+ FI+
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           +MP+EP   V+GA+L AC++H  +++G  AA+ LF+L P + GY+VLL+NIYA A MW  
Sbjct: 468 QMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKD 527

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  VR  M+K G++K PG S VEL  +VH+F +G   HPQ+K IY  L+ L+ ++K  GY
Sbjct: 528 VMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGY 587

Query: 723 VPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           +P T S +HDVE   +E  L+ HSEKLAI F +LN+  G+ I I KNLRVCGDCH A K 
Sbjct: 588 IPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKL 647

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS +  R IIVRD +RFH F NG+CSCGDYW
Sbjct: 648 ISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 420/740 (56%), Gaps = 7/740 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++ K  S+ +   VFE +P K    + ++L G A      + ++   RMR + + 
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + +  +L      G +  G+ +H Q +  G    +F    ++NMYAKCG +E+A  +
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ M  RD+VSWNT++AG   N     AL L         +    T  +++   AN+  L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNVVSWNSMIAA 314
            + + +H   ++ GF    NV TAL D Y+KCG +  A  +F     SRNVVSW ++I+ 
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            ++ G+   A+ +F +M +  V P   T    L A   +   +    +H  + +      
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IHAQVIKTNYQHI 434

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             +  +L++ YSK    + A  IF  ++ K +V+W+AM+  +AQ G    A   F KM  
Sbjct: 435 PFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI 494

Query: 435 KNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           + IKP+ FT+ SVI A A  S  +   +  HA+ I+  +   + V +AL+ MY++ G + 
Sbjct: 495 QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNID 554

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +A+ +F+   +R + +WN MI GY  HG    A+E F +M     + + +TFL  I  C+
Sbjct: 555 SAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCT 614

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV EG  YF S+ +D+ I P M+HY  MVDL  RAG+L+E    I+ MP   G  V+
Sbjct: 615 HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVW 674

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +LGAC++HKNVELG+ +A++L  L+P +   +VLL+NIYAAA  W +  +VR +M+ +
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K  GCS +++KN+VHSF +    HP S +IY  L+ +I  +K  GY P+T+ + HD+
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDI 794

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  +E +L +HSE+LA+AFGL+ + PG+ + I KNLRVCGDCH   K +S++  REII+
Sbjct: 795 AEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIM 854

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F  G CSCGD+W
Sbjct: 855 RDCSRFHHFNGGACSCGDFW 874



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 244/457 (53%), Gaps = 8/457 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           +LK C  V +   G+++H   +  G    ++ A T +V+MY KCG + E  ++F+ MP++
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++V+W +++ G A        + L  RM  EG   +  T  S+L AVA+ G+L +G+ VH
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             +++ G  S V V  +L++MYAKCG VE A+ VF+ M++R++VSWN+++A         
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+++F +      + T  T    +  CA+L  L     +H  + +       ++  +L 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344

Query: 383 SMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
             YSKC ++  A +IFS   G + +VSW A+I G  QNG +  A+  F +MR   + P+ 
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FT  +++   A LS++     IHA VI++ ++   FV TAL+  Y+K G+   A ++F M
Sbjct: 405 FTYSAMLK--ASLSIL--PPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKM 460

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-HSGLVEE 560
           + ++ V  W+ M+  +   G  + A  LFNKM     KPN+ T    I AC+  S  V++
Sbjct: 461 IEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ 520

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           G   F ++   Y     +    A+V +  R G ++ A
Sbjct: 521 G-RQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 178/359 (49%), Gaps = 3/359 (0%)

Query: 196 FDRMPERDL-VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
            D +P RD  V  N ++  +A+ G     LD  +     G   D  T+  +L A  +V  
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 255 LRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             +G+ +H   ++ G D   V+  T+LVDMY KCG V     VF+GM  +NVV+W S++ 
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
                    E M +F +M  +G+ P   T    L A A  G L+ G  VH    +    +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            V + NSL++MY+KC  V+ A  +F+ ++ + +VSWN ++ G   N    EAL  F + R
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           +   K    T  +VI   A L  +  A+ +H+ V++  F     VMTAL D Y+KCG + 
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354

Query: 494 TARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
            A  +F M    R+V +W  +I G   +G    AV LF++M E    PN+ T+   + A
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/774 (35%), Positives = 436/774 (56%), Gaps = 8/774 (1%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP-DK 101
           +L+ C +L E R    I  + +K G  +       L++++ K   L  A  +F+ I  +K
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 102 LDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            D + +++++  +       +A+S   RM+   VA   Y +   L+   D   ++ G  I
Sbjct: 211 EDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG  + +    D++    ++ MYAKCG++E+A ++F  M  RD VSWNT+++G  QN   
Sbjct: 271 HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY 330

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL+    M    ++ D +++++++ A    G+L  GK VH YA+R G DS + +   L
Sbjct: 331 RDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTL 390

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKC  V+     F+ M  ++++SW ++IA Y +     EA+ +F+K+  +G++   
Sbjct: 391 IDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDP 450

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           + I   L AC+ L        +H  + +  L  D+ + N+++++Y +    D A   F  
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFES 509

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K +VSW +MI     NG   EAL  F  ++  NI+PDS  ++S + A A LS ++  
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +IR  F     + ++L+DMYA CG V  +R +F  + +R +  W  MI+  G H
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G  A+ LF KM +    P+ ITFL  + ACSHSGL+ EG  +F  +K  Y +EP  +H
Sbjct: 630 GCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEH 689

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVDLL R+  L EA+ F++ MPI+P   V+ A+LGAC IH N ELGE AA  L + D
Sbjct: 690 YACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSD 749

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
               G + L++NI+AA   W+ + +VR  M+  GL+K PGCS +E+ N++H+F +    H
Sbjct: 750 TKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSH 809

Query: 701 PQSKRIYTFLETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           PQ+  IY  L      + K  GY+  T  + H+V +  +  +L  HSE+LA+ +GLL + 
Sbjct: 810 PQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTP 869

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            G++I I KNLR+C DCH   K  S V+ R ++VRD +RFH F+ G+CSCGD+W
Sbjct: 870 KGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 190/644 (29%), Positives = 318/644 (49%), Gaps = 48/644 (7%)

Query: 35  PSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           PSR+  H  +LLL++C ++K L   +++   ++KS L       TKL+ ++ K  SL DA
Sbjct: 42  PSRL-EHAHSLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDA 98

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ + ++    ++ M+  +       +A+     MR   VA     +  +LK CG +
Sbjct: 99  VKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGAL 158

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNT 209
           GE R G EIHG  +  GF   +F    ++ MY KCG +  A  +FD   M + D VSWN+
Sbjct: 159 GESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNS 218

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           I++     G    AL L  RM E G   +  T V+ L  V +   +++G  +HG A+++ 
Sbjct: 219 IISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSN 278

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
             + V V+ AL+ MYAKCGR+E A  VF  M  R+ VSWN++++  V+     +A+  F+
Sbjct: 279 HFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFR 338

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            M +   +P  V+++  + A    G+L  G  VH    +  L +++ + N+LI MY+KC 
Sbjct: 339 DMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC 398

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            V      F  +  K L+SW  +I GYAQN    EA+N F K++ K +  D   + SV+ 
Sbjct: 399 CVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLR 458

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A + L    + + IH  V +     ++ +  A++++Y + G    AR  F+ +  + + +
Sbjct: 459 ACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVS 517

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTS 567
           W  MI     +GL   A+ELF  + +   +P+ I  + A+SA ++   +++G  IH F  
Sbjct: 518 WTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFL- 576

Query: 568 LKKDYGIE-----PVMDHYG------------------------AMVDLLGRAGRLNEAW 598
           ++K + +E      ++D Y                         +M++  G  G  NEA 
Sbjct: 577 IRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAI 636

Query: 599 DFIQKMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
              +KM  E   P    F A+L AC  H  + +  K   R FE+
Sbjct: 637 ALFKKMTDENVIPDHITFLALLYACS-HSGLMVEGK---RFFEI 676


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/624 (39%), Positives = 390/624 (62%), Gaps = 3/624 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR-GDFITIVSILPAVA 250
           AY +F    E D+++WN+++  F  +     AL   T M E  R   D  T  S+L   A
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            +   ++GK +HG  ++    S + + T L++MYA CG +++AR +F+ M  RN V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MI+ Y++   P EA+ +++KM + G  P  VT+   + ACA+L DL  G+ +H  + ++ 
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +     + ++L++MY+KC  +  A  +F KL  K + +W+A+I GY +N R  EAL  F 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 431 KMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           ++    N++P+  T+++VI A A+L  +   +W+H  + R+    +V +  +LIDM++KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A+ +FD M+ + + +WN M++G+  HGLG+ A+  F  M     +P++ITF+  +
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +ACSH+GLV+EG   F  ++  YG+    +HYG MVDLL RAG L EA +FI+ MP++P 
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             ++G+MLGAC+++ N+ELGE+AA  L +L+P   G ++LL+NIYA   MW+++ KVR +
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVREL 510

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M +KG+QKTPGCS V + N  HSF +G   HP+   I   L  + +++K AGYV DT+ +
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEV 570

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
             +++D  +E  +S HSEKLA+ +GLL S  G  I I KNLRVC DCH   K +S +  R
Sbjct: 571 LLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQR 630

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           +I +RD +RFH FK+G CSC DYW
Sbjct: 631 QITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 242/466 (51%), Gaps = 24/466 (5%)

Query: 101 KLDAL-YHTMLKGYAKF----ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           +LD L +++ML+ +        +L      L R R     P  + +  LLK C  + E +
Sbjct: 40  ELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRN---VPDRFTFPSLLKGCALLLEFK 96

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GK +HGQ++      DL+  T ++NMYA CG ++ A  +F+RM  R+ V W ++++G+ 
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           +N     AL L  +M E+G   D +T+ +++ A A +  L +G  +H +           
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQ 334
           + +ALV+MYAKCG ++TAR VFD +  ++V +W+++I  YV+     EA+++F+++    
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            + P  VTI+  + ACA LGDLE G +VH  + + + G  VS+ NSLI M+SKC  +D A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             IF  +  K L+SWN+M+ G+A +G   EAL  F  M++ +++PD  T + V+ A +  
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396

Query: 455 SVIRYAK----WIHALV-IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVT 508
            +++  K     I AL  +R   E        ++D+  + G +  AR    +M  +    
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEH----YGCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452

Query: 509 TWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
            W  M+     Y    LG+ A     K+   PT       L  I A
Sbjct: 453 IWGSMLGACRVYNNLELGEEAARFLLKL--EPTNDGVYILLSNIYA 496



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 185/356 (51%), Gaps = 8/356 (2%)

Query: 9   LSVFTNST-PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR--RIL-PLII 64
           L  F NS  P + L  +   L +   +P R +  PS  LL+ C  L E +  ++L   ++
Sbjct: 50  LRAFVNSNMPRRALQSYTEMLERSRNVPDR-FTFPS--LLKGCALLLEFKVGKVLHGQVV 106

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K  L      +T L++++     L  A  +FE +  +   ++ +M+ GY K    ++A+ 
Sbjct: 107 KYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALL 166

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
              +M  D  +P       L+  C ++ ++  G ++H  +      +     + +VNMYA
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYA 226

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRGDFITIV 243
           KCG ++ A ++FD++ ++D+ +W+ ++ G+ +N  +  AL L   +      R + +TI+
Sbjct: 227 KCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTIL 286

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +++ A A +G L  G+ VH Y  R      V+++ +L+DM++KCG ++ A+ +FD M  +
Sbjct: 287 AVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK 346

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +++SWNSM+  +   G   EA+  F+ M    ++P  +T +  L AC+  G ++ G
Sbjct: 347 DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVI 448
           V  A  +F+  +   +++WN+M+  +  +     AL  + +M  RS+N+ PD FT  S++
Sbjct: 28  VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV-PDRFTFPSLL 86

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              A L   +  K +H  V++     ++++ T L++MYA CG + +AR LF+ M  R+  
Sbjct: 87  KGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKV 146

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            W  MI GY  +     A+ L+ KM E    P+++T    +SAC+    +  G+   + +
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206

Query: 569 KK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           ++ D  I  V+    A+V++  + G L  A     K+  +        + G  K +++ E
Sbjct: 207 REMDMKICAVLG--SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 628 LGEKAANRLFE-------LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
                A +LF        + P+E     +LA I A A + D L   R + +   + +T  
Sbjct: 265 -----ALQLFREVAGGSNMRPNEV---TILAVISACAQLGD-LETGRWVHDY--ITRTQK 313

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIY 707
              V L N +   +S       +KRI+
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIF 340



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/142 (20%), Positives = 64/142 (45%), Gaps = 2/142 (1%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
               L+ +F K   +  A R+F+ +  K    +++M+ G+A      +A++    M+  D
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD 378

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           + P    +  +L  C   G ++ GK++  ++  + G  L       +V++  + G + EA
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEA 438

Query: 193 YKMFDRMP-ERDLVSWNTIVAG 213
            +    MP + D   W +++  
Sbjct: 439 REFIRVMPLQPDGAIWGSMLGA 460


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/675 (40%), Positives = 402/675 (59%), Gaps = 45/675 (6%)

Query: 147 VCGDV----GEIRRGKEIHGQLIVNGFSLDLFAMTGV----VNMYAKCGQIEEAYKMFDR 198
           +CG +     +I+  K++H ++ ++    DL +   +    +  YA CG+      +FD 
Sbjct: 40  LCGQILDKNPDIKYLKKLHSKICIDH---DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDE 96

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           +P++++V +N ++  +  N     AL +   M   G   D  T   +L A +    L +G
Sbjct: 97  IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVG 156

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
             +H   +R G D  V V   L+ MY KCG +  A  V D M  R+VVSWNS++A     
Sbjct: 157 MQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARN 216

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  ++A+ + ++M   G++P   T+   L A                           +T
Sbjct: 217 GQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------VT 249

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+ +   S  K      ++F KL  K+LVSWN MI  Y  N    EA++ F +M    + 
Sbjct: 250 NTCLDNVSFVK------EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVD 303

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD+ ++ SV+PA  +LS +   + IH  V+R   + N+ +  ALIDMYAKCG +  AR +
Sbjct: 304 PDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREV 363

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M  R V +W  MI  YG +G G+ AV LF++M +    P+ I F+  +SACSH+GL+
Sbjct: 364 FDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLL 423

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           +EG +YF  + ++  I P ++H+  MVDLLGRAG+++EA+ FI++MP+EP   V+GA+L 
Sbjct: 424 DEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 483

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC+++ N+ +G  AA++LF+L P++ GY+VLL+NIYA A  W+ +  VR+IM+ KG++K 
Sbjct: 484 ACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKM 543

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQ 737
           PG S  EL N VH+F +G   HPQSK+IY  L+  + ++K AGYVP+T+S +HDVE+  +
Sbjct: 544 PGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDK 603

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E  L+ HSEKLAIAF +LN++PGS I I KNLRVCGDCH A K IS + GREI +RD +R
Sbjct: 604 ECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNR 663

Query: 798 FHCFKNGVCSCGDYW 812
           FH F NGVCSCGDYW
Sbjct: 664 FHHFYNGVCSCGDYW 678



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 224/459 (48%), Gaps = 51/459 (11%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ IP K    ++ M++ Y       DA+     M    + P  Y Y  +LK      +
Sbjct: 93  IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +  G +IH  ++  G  L++F   G+++MY KCG + EA ++ D+MP RD+VSWN++VAG
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
            A+NG  + AL++   M   G + D  T+ S+LPAV N                     +
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT-------------------CL 253

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            NVS                + +F  + ++++VSWN MIA Y+    P EA+ IF +M D
Sbjct: 254 DNVS--------------FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 299

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             V+P  ++I   L AC DL  L  G  +H+ + + +L  ++ + N+LI MY+KC  ++ 
Sbjct: 300 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 359

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F +++ + +VSW +MI  Y  NG+  +A++ F +M+   + PDS   VSV+ A + 
Sbjct: 360 AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 419

Query: 454 LSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMM----NERHVT 508
             ++   ++   L+   C     +     ++D+  + G V  A      M    NER   
Sbjct: 420 AGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER--- 476

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
            W  ++          +A  +++ M+ G    + +  LC
Sbjct: 477 VWGALL----------SACRVYSNMIIGLLAADQLFQLC 505



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 34/333 (10%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +++ GL         L+S++ K   L +A RV + +P +    +++++ G A+    DDA
Sbjct: 163 VVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDA 222

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     M    + P       LL                    V    LD          
Sbjct: 223 LEVCKEMELLGLKPDAGTMASLLPA------------------VTNTCLD---------- 254

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
                 +    +MF ++  + LVSWN ++A +  N     A+D+  +M +     D I+I
Sbjct: 255 -----NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISI 309

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+LPA  ++ +L +G+ +H Y +R      + +  AL+DMYAKCG +E AR VFD MK 
Sbjct: 310 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 369

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R+VVSW SMI+AY   G   +A+ +F +M D G+ P ++  +  L AC+  G L+ G + 
Sbjct: 370 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYY 429

Query: 363 HKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            KL+ ++ K+   +     ++ +  +  +VD A
Sbjct: 430 FKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 462



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 10/235 (4%)

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
           +++S    +F  + +K    ++ M+  Y   +   +AV   ++M    V P   +   +L
Sbjct: 254 DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 313

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
             CGD+  +  G+ IH  ++      +L     +++MYAKCG +E A ++FD+M  RD+V
Sbjct: 314 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV 373

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW ++++ +  NG    A+ L +RM + G   D I  VS+L A ++ G L  G+    Y 
Sbjct: 374 SWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR----YY 429

Query: 266 MRAGFDSIVNVS-----TALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
            +   +    V        +VD+  + G+V+ A      M    N   W ++++A
Sbjct: 430 FKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 7/176 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C  L  L   RRI   +++  L    L +  L+ ++ K   L  A  VF+ +  
Sbjct: 310 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 369

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    + +M+  Y       DAVS   RM+   + P    +  +L  C   G +  G+  
Sbjct: 370 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR-Y 428

Query: 161 HGQLIVNGFSL--DLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
           + +L+     +   +     +V++  + GQ++EAY    +MP E +   W  +++ 
Sbjct: 429 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/706 (38%), Positives = 409/706 (57%), Gaps = 67/706 (9%)

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F+   +++ YAK G++E+A+++FD +P RD VSW TI+ G+ Q G  E A+ +   M ++
Sbjct: 42  FSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD 101

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
                  T+ ++L + A  GS  IGK VH + ++ G  + V V+ +L++MYAK G ++ A
Sbjct: 102 KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161

Query: 294 RLVFDGMKSRN-------------------------------VVSWNSMIAAYVEGGNPE 322
           ++VFD MK RN                               +VSWNSMIA   + G   
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221

Query: 323 EAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EA++ F  +L D  ++P   ++  AL ACA+L  L  G  +H  + +       ++ N+L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281

Query: 382 ISMYSKCKKVD---------------------------------RAADIFSKLQGKTLVS 408
           ISMY+K   V+                                  A  IF+ L+   +V+
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI+GY QNG  N+A+  F  M S+  +P+SFT+ +++ A + ++ + + K IHA  I
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAV 527
           RS    +  V  AL  MYAK G++  AR +F+++ + R   +W  MI     HGLG+ A+
Sbjct: 402 RSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAI 461

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ELF +ML    KP+ IT++  +SAC+H GLVE+G  YF  +K  + I+P + HY  MVDL
Sbjct: 462 ELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDL 521

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
            GRAG L EA+ F++ MP+EP +  +G++L +CK++KNV+L + AA RL  ++P+  G +
Sbjct: 522 FGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAY 581

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
             LAN+Y++   WD  AK+R +M+ +G++K  G S V+++N+ H F      HPQ   IY
Sbjct: 582 SALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIY 641

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             ++ +  EIK  G+ PDT S+ HD+E  V++ +L  HSEKLAIAFG++++   +T+ I 
Sbjct: 642 KMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIM 701

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC DCHNA K+IS +  REIIVRD  RFH FK+G CSC DYW
Sbjct: 702 KNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 237/546 (43%), Gaps = 109/546 (19%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K   L  A +VF+ IP +    + T++ GY +    +DA+   + M  D V P 
Sbjct: 47  ILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPT 106

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +L  C   G    GK++H  ++  G    +     ++NMYAK G ++ A  +FD
Sbjct: 107 QFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFD 166

Query: 198 RM-------------------------------PERDLVSWNTIVAGFAQNGFAELALDL 226
           RM                                ERD+VSWN+++AG  Q+GF   AL  
Sbjct: 167 RMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQF 226

Query: 227 VTR-MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            +  + +   + D  ++ S L A AN+  L  GK +HGY +R  FD+   V  AL+ MYA
Sbjct: 227 FSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYA 286

Query: 286 KCGRVET---------------------------------ARLVFDGMKSRNVVSWNSMI 312
           K G VE                                  AR +F+ +K  +VV+W +MI
Sbjct: 287 KSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMI 346

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             YV+ G   +A+ +F+ M+ +G  P + T+   L A + +  L  G  +H    +    
Sbjct: 347 VGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA 406

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
              S+ N+L +MY+K   ++ A  +F+ L Q +  VSW +MI+  AQ+G   EA+  F +
Sbjct: 407 LSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQ 466

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M +  IKPD  T V V+ A                                       G 
Sbjct: 467 MLTLGIKPDHITYVGVLSACTH-----------------------------------GGL 491

Query: 492 VGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           V   R+ FD+M   H     ++ +  M+D +G  GL + A +    M   P +P+ I + 
Sbjct: 492 VEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM---PMEPDVIAWG 548

Query: 547 CAISAC 552
             +S+C
Sbjct: 549 SLLSSC 554



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 207/465 (44%), Gaps = 69/465 (14%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAP 136
           ++SL      +  A   FE + ++    +++M+ G  +    ++A+ F   +  D  + P
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS-------------------------- 170
             ++    L  C ++ ++  GK+IHG ++   F                           
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298

Query: 171 -------LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
                  LD+ A T ++N Y K G I  A ++F+ + + D+V+W  ++ G+ QNG    A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +++   M  EG R +  T+ ++L A ++V SL  GK +H  A+R+G     +V  AL  M
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418

Query: 284 YAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           YAK G +  AR VF+ ++ +R+ VSW SMI A  + G  EEA+ +F++ML  G++P ++T
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC   G +E+G                    S   +     K+D          
Sbjct: 479 YVGVLSACTHGGLVEQG-------------------RSYFDLMKNVHKID---------- 509

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
             TL  +  M+  + + G + EA  +   M    ++PD     S++ +      +  AK 
Sbjct: 510 -PTLSHYACMVDLFGRAGLLQEAYKFVENMP---MEPDVIAWGSLLSSCKVYKNVDLAK- 564

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + A  +      N    +AL ++Y+ CG    A  +  +M  R V
Sbjct: 565 VAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGV 609



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 200/472 (42%), Gaps = 107/472 (22%)

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN----- 320
           ++ G    V +   L+++YAK G    A  +F+ M  +   SWN++++ Y + G      
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 321 ------P--------------------EEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
                 P                    E+A++IF  M+   V PT  T+   L +CA  G
Sbjct: 62  QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK--------------------------- 387
               G  VH  + +L L   V + NSL++MY+K                           
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181

Query: 388 ----CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSF 442
               C +VD A   F  L  + +VSWN+MI G  Q+G  NEAL +F   ++  ++KPD F
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV---------- 492
           ++ S + A A L  + + K IH  ++R+ F+ +  V  ALI MYAK G V          
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301

Query: 493 -----------------------GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                                    AR +F+ + +  V  W  MI GY  +GL   A+E+
Sbjct: 302 GISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEV 361

Query: 530 FNKML-EGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVD 586
           F  M+ EGP +PN  T    +SA S    +  G  IH  ++++    + P + +  A+  
Sbjct: 362 FKTMVSEGP-RPNSFTLAAMLSASSSVTSLNHGKQIHA-SAIRSGEALSPSVGN--ALTT 417

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +  +AG +N A      +        + +M+ A   H    LGE+A   LFE
Sbjct: 418 MYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGEEAI-ELFE 465



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 25/303 (8%)

Query: 57  RRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAK 115
           RRI+    +SG+ D  +   T L++ + K   ++ A ++F  + D     +  M+ GY +
Sbjct: 295 RRIIE---QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQ 351

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
               +DA+     M  +   P  +    +L     V  +  GK+IH   I +G +L    
Sbjct: 352 NGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSV 411

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
              +  MYAK G I  A K+F+ + + RD VSW +++   AQ+G  E A++L  +M   G
Sbjct: 412 GNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG 471

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---------TALVDMYA 285
            + D IT V +L A  + G +  G        R+ FD + NV            +VD++ 
Sbjct: 472 IKPDHITYVGVLSACTHGGLVEQG--------RSYFDLMKNVHKIDPTLSHYACMVDLFG 523

Query: 286 KCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           + G ++ A    + M    +V++W S++++     N + A    +++L   +EP N    
Sbjct: 524 RAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLL--LIEPNNSGAY 581

Query: 345 EAL 347
            AL
Sbjct: 582 SAL 584



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 5/166 (3%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTM 109
           TSL   ++I    I+SG          L +++ K  S++ A +VF  +    D + + +M
Sbjct: 388 TSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSM 447

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +   A+    ++A+    +M    + P    Y  +L  C   G + +G+  +  L+ N  
Sbjct: 448 IMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS-YFDLMKNVH 506

Query: 170 SLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
            +D  L     +V+++ + G ++EAYK  + MP E D+++W ++++
Sbjct: 507 KIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/662 (41%), Positives = 389/662 (58%), Gaps = 4/662 (0%)

Query: 155 RRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           R G+  H Q+I      L  F    +VNMY+K  +   A  +    P R +V+W  ++AG
Sbjct: 23  RLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
             QNG    AL   + M  +  + +  T      A  ++ S  +GK VH  A++AG  S 
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V  +  DMY+K G  E AR +FD M  RN+ +WN+ ++  V  G  ++A+  F +   
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRH 202

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G EP  +T    L+ACA    L  G  +H  + Q     DVS+ N LI  Y KC +V  
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGC 262

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           +  IFS +     VSW +MI+ Y QN    +A   F + R + I+P  F + SV+ A A 
Sbjct: 263 SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAG 322

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LSV+   K +H L +++C   N+FV +AL+DMY KCG++  A   FD M ER++ TWN M
Sbjct: 323 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 382

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTK--PNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
           I GY   G    AV LF++M  G  +  PN +TF+C +SACS +G V  G+  F S++  
Sbjct: 383 IGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGR 442

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YGIEP  +HY  +VDLLGRAG + +A+ FI+KMPI P ++V+GA+LGA K+    ELG+ 
Sbjct: 443 YGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKV 502

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA+ LFELDP + G HVLL+N++AAA  W++   VR  M+  G++K  GCS +   N VH
Sbjct: 503 AADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVH 562

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAI 750
            F +  T H ++  I   L  L  E++AAGY+PDT+ ++ D+E+  +   +  HSEK+A+
Sbjct: 563 VFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIAL 622

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFGL++   G  I I KNLR+CGDCH+A K+IS + GREIIVRD + FH F++  CSC D
Sbjct: 623 AFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRD 682

Query: 811 YW 812
           YW
Sbjct: 683 YW 684



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 224/458 (48%), Gaps = 7/458 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+++ K +  + A  +    P++    +  ++ G  +      A+     MR D + P 
Sbjct: 48  LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + +    K  G +     GK++H   +  G   D+F      +MY+K G  EEA KMFD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPER++ +WN  ++     G  + AL        EG   + IT  + L A A    LR+
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRL 227

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +HG+ +++GF++ V+V+  L+D Y KC +V  + ++F G+   N VSW SMI +YV+
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQ 287

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +   +G+EPT+  +   L ACA L  LE G  VH L  +  +  ++ +
Sbjct: 288 NDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 347

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR--SK 435
            ++L+ MY KC  ++ A   F ++  + LV+WNAMI GYA  G+ + A+  F +M   S 
Sbjct: 348 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 407

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            + P+  T V V+ A +    +     I  ++  R   E        ++D+  + G V  
Sbjct: 408 RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 467

Query: 495 ARALFDMMNER-HVTTWNVMIDG---YGTHGLGKAAVE 528
           A      M  R  V+ W  ++     +G   LGK A +
Sbjct: 468 AYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAAD 505



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 180/375 (48%), Gaps = 9/375 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++  L +K+G             ++ K     +A ++F+ +P++  A ++  L      
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              DDA++  I  R++   P +  +   L  C     +R G+++HG ++ +GF  D+   
Sbjct: 188 GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            G+++ Y KC Q+  +  +F  + + + VSW +++  + QN   E A  +  R  +EG  
Sbjct: 248 NGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIE 307

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
                + S+L A A +  L +GK+VH  A++A     + V +ALVDMY KCG +E A   
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERA 367

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLG 354
           FD M  RN+V+WN+MI  Y   G  + A+ +F +M      V P  VT +  L AC+  G
Sbjct: 368 FDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAG 427

Query: 355 DLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAM 412
            +  G+ +   +  +  +         ++ +  +   V++A     K+  +  VS W A+
Sbjct: 428 SVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGAL 487

Query: 413 I-----LGYAQNGRV 422
           +      G ++ G+V
Sbjct: 488 LGASKMFGKSELGKV 502


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 287/782 (36%), Positives = 447/782 (57%), Gaps = 15/782 (1%)

Query: 43  SALLLEVC--TSLKELRRILP-LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           S+LLL+ C  +   EL ++L   +I SGL    +    L++L+ K     +A  +F  + 
Sbjct: 42  SSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMG 101

Query: 100 DKLDAL--YHTMLKGYAKFASLDDAV-SFL--IRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
                L  +  ++  +A  +    A+ +FL  ++   + + P  Y +T LL+ C +    
Sbjct: 102 HHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFF 161

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCG-QIEEAYKMFDRMPERDLVSWNTIV 211
             G  I   L+  G+  D     G  +++M+ K G  I+ A  +FD+M  ++LV+W  ++
Sbjct: 162 TTGLAIFAFLLKTGY-FDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMI 220

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
             ++Q G  + A+DL  R+       D  T+ S+L A   +    +GK +H + +R+G  
Sbjct: 221 TRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLA 280

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S V V   LVDMYAK   VE +R +F+ M   NV+SW ++I+ YV+    +EA+++F  M
Sbjct: 281 SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
           L   V P   T    L ACA L D   G  +H    +L L T   + NSLI+MY++   +
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           + A   F+ L  K L+S+N      A+    +E+ N+  ++    +    FT   ++   
Sbjct: 401 ECARKAFNILFEKNLISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGA 458

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A +  I   + IHAL+++S F  N+ +  ALI MY+KCG    A  +F+ M  R+V TW 
Sbjct: 459 ACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWT 518

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            +I G+  HG    A+ELF +MLE   KPN++T++  +SACSH GL++E   +F S+  +
Sbjct: 519 SIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYN 578

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           + I P M+HY  MVDLLGR+G L EA +FI  MP +    V+   LG+C++H+N +LGE 
Sbjct: 579 HSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEH 638

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA ++ E +P +   ++LL+N+YA+   WD +A +R  M++K L K  G S +E+ N+VH
Sbjct: 639 AAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVH 698

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
            F+ G T HPQ+++IY  L+ L  +IK  GY+P+T+ + HDVED  +E  L  HSEK+A+
Sbjct: 699 KFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAV 758

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           A+ L+++     I + KNLRVCGDCH A KYIS+VTGREI+VRD +RFH  K+G CSC D
Sbjct: 759 AYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCND 818

Query: 811 YW 812
           YW
Sbjct: 819 YW 820


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/732 (36%), Positives = 403/732 (55%), Gaps = 60/732 (8%)

Query: 141  YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            Y+  LK C  V +I  G EIHG LI  GF LD++    ++N Y +C  +E+A ++F  MP
Sbjct: 677  YSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP 736

Query: 201  ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
              + + WN  +    Q+   +  ++L  +M     + +  TIV +L A   +G+L   K 
Sbjct: 737  NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQ 796

Query: 261  VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE--- 317
            +HGY  R G DS V++   L+ MY+K G++E AR VFD M++RN  SWNSMI++Y     
Sbjct: 797  IHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGF 856

Query: 318  --------------------------------GGNPEEAMRIFQKMLDQGVEPTNVTIME 345
                                             G  EE + I Q+M  +G +P + ++  
Sbjct: 857  LNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTS 916

Query: 346  ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
             L A ++LG L  G   H  + +     DV +  SLI MY K   +  A  +F  ++ + 
Sbjct: 917  VLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRN 976

Query: 406  LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD------------------------S 441
            + +WN+++ GY+  G   +AL    +M  + IKPD                        S
Sbjct: 977  IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNS 1036

Query: 442  FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
             ++  ++ A A LS+++  K IH L IR+ F ++VFV TALIDMY+K  ++  A  +F  
Sbjct: 1037 ASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR 1096

Query: 502  MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
            +  + + +WN MI G+   GLGK A+ +FN+M +    P+ ITF   +SAC +SGL+ EG
Sbjct: 1097 IQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 1156

Query: 562  IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
              YF S+  DY I P ++HY  MVDLLGRAG L+EAWD I  MP++P  T++GA+LG+C+
Sbjct: 1157 WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 1216

Query: 622  IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
            IHKN+   E AA  LF+L+P+    ++L+ N+Y+  + W+ +  +R +M   G++     
Sbjct: 1217 IHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVW 1276

Query: 682  SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ-ENL 740
            S +++   VH F S    HP + +IY  L  L+ E+K  GYVPD N ++   D V+ + +
Sbjct: 1277 SWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKI 1336

Query: 741  LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
            L SH+EKLAI +GL+    G  I + KN R+C DCH+A KYISLV  RE+ +RD  RFH 
Sbjct: 1337 LLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHH 1396

Query: 801  FKNGVCSCGDYW 812
            F+ G CSC D+W
Sbjct: 1397 FREGKCSCNDFW 1408



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 253/541 (46%), Gaps = 64/541 (11%)

Query: 44   ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            ++ L+ CT + ++     I   +IK G       +  L++ + +   L  A +VF  +P+
Sbjct: 678  SVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN 737

Query: 101  KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                L++  +    +   L   V    +M++  +         +L+ CG +G +   K+I
Sbjct: 738  PEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQI 797

Query: 161  HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER------------------ 202
            HG +   G   D+     +++MY+K G++E A ++FD M  R                  
Sbjct: 798  HGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFL 857

Query: 203  -----------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
                             D+V+WN +++G   +G+ E  L+++ RM  EG + +  ++ S+
Sbjct: 858  NDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSV 917

Query: 246  LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
            L A++ +G L +GK  HGY +R GFD  V V T+L+DMY K   + +A+ VFD MK+RN+
Sbjct: 918  LQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNI 977

Query: 306  VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT----------------------- 342
             +WNS+++ Y   G  E+A+R+  +M  +G++P  VT                       
Sbjct: 978  FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSA 1037

Query: 343  -IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
             I   L ACA L  L++G  +H L  +     DV +  +LI MYSK   +  A  +F ++
Sbjct: 1038 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 1097

Query: 402  QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA- 460
            Q KTL SWN MI+G+A  G   EA++ F +M+   + PD+ T  +++ A     +I    
Sbjct: 1098 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 1157

Query: 461  KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGT 519
            K+  +++        +     ++D+  + G +  A  L   M  +   T W  ++     
Sbjct: 1158 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 1217

Query: 520  H 520
            H
Sbjct: 1218 H 1218



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 203/418 (48%), Gaps = 36/418 (8%)

Query: 175  AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEE 233
            A   +++ Y   G    A  +F     R+ + WN+ V  F  + G   + L++   +H +
Sbjct: 609  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668

Query: 234  GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            G   D       L     V  + +G  +HG  ++ GFD  V +  AL++ Y +C  +E A
Sbjct: 669  GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 728

Query: 294  RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
              VF  M +   + WN  I   ++    ++ + +F+KM    ++    TI+  L AC  +
Sbjct: 729  NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 788

Query: 354  GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
            G L     +H  + +  L +DVS+ N LISMYSK  K++ A  +F  ++ +   SWN+MI
Sbjct: 789  GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 848

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPD--------------------------------- 440
              YA  G +N+A + F ++ S ++KPD                                 
Sbjct: 849  SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFK 908

Query: 441  --SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
              S +M SV+ A++EL  +   K  H  V+R+ F+ +V+V T+LIDMY K  ++ +A+A+
Sbjct: 909  PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAV 968

Query: 499  FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            FD M  R++  WN ++ GY   G+ + A+ L N+M +   KP+ +T+   IS  +  G
Sbjct: 969  FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 256/568 (45%), Positives = 367/568 (64%), Gaps = 3/568 (0%)

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           P V   G L  GK +H   ++ GF+  V V+ +LV MY++ G V  AR +FD M +R+  
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN+MI+ Y + GN  EA+ I  +M  +GV+   +T+   L  CA +GD+  G  +H  +
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +  L  ++ ++N+LI+MY+K   +  A  +F  L  K +VSWN +I GYAQNG  +EA+
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAI 180

Query: 427 NYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
             +  M   + I P+  T VS++PA + +  ++    IH  VI++C   +VFV T LIDM
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y KCG +  A +LF  +  ++   WN MI  YG HG G+ A+ELF +M     KP+ ITF
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITF 300

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  +SACSHSGLV +    F  ++++YGI+P + HYG MVDL GRAG L  A++FI+KMP
Sbjct: 301 VSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I+P  + +GA+L AC+IH N+ELG+ A+ RLFE+D +  GY+VLL+NIYA    W+ +  
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDD 420

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           VR++   +GL+K PG S + L N+V  FY+G+  HP+ + IY  L  L  +IK  GYVPD
Sbjct: 421 VRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPD 480

Query: 726 -TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
               + DVE+  +E++L  HSE+LAIA+G++++SP + I I KNLRVCGDCH  TK+IS+
Sbjct: 481 FCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISI 540

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +T REIIVRD  RFH FK G CSCGDYW
Sbjct: 541 ITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 224/426 (52%), Gaps = 48/426 (11%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           ++K CGD+ +   GK+IH  ++  GF  D+F    +V+MY++ G + +A K+FD MP RD
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
             SWN +++G+ QNG A  ALD+   M  EG + D IT+ S+LP  A VG +  GK +H 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           Y ++ G +  + VS AL++MYAK G +  A+ VF G+  ++VVSWN++I  Y + G   E
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASE 178

Query: 324 AMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           A+ ++  M + + + P   T +  L A + +G L++G+ +H  + +  L +DV +   LI
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY KC K+D A  +F ++  K  V WNAMI  Y  +G   +AL  F +M+++ +KPD  
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T VS++ A +   ++  A+W                                    F+MM
Sbjct: 299 TFVSLLSACSHSGLVSDAQW-----------------------------------CFNMM 323

Query: 503 NERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            E +     +  +  M+D +G  G  + A     KM   P +P+   +   ++AC   G 
Sbjct: 324 EEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM---PIQPDASAWGALLNACRIHGN 380

Query: 558 VEEGIH 563
           +E G H
Sbjct: 381 IELGKH 386



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 207/375 (55%), Gaps = 12/375 (3%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +++ C  L + ++I  L++K G          LV ++ ++  + DA ++F+ +P +    
Sbjct: 3   VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ M+ GY +  +  +A+     MR + V         +L VC  VG+I  GK IH  +I
Sbjct: 63  WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVI 122

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            +G   +LF    ++NMYAK G +  A K+F  +  +D+VSWNT++ G+AQNG A  A++
Sbjct: 123 KHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIE 181

Query: 226 --LVTRMHEE--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             L+   HEE    +G   T VSILPA ++VG+L+ G  +HG  ++    S V V T L+
Sbjct: 182 VYLLMEEHEEIIPNQG---TWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KCG+++ A  +F  +  +N V WN+MI+ Y   G+ E+A+ +F++M  + V+P ++
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFS 399
           T +  L AC+  G +    +   ++++ + G   S+ +   ++ ++ +  +++ A +   
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEE-EYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357

Query: 400 KLQGKTLVS-WNAMI 413
           K+  +   S W A++
Sbjct: 358 KMPIQPDASAWGALL 372



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 156/306 (50%), Gaps = 13/306 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L VC  + ++   + I   +IK GL  +      L++++ K+ SL  A +VF  +  
Sbjct: 99  ASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK 158

Query: 101 KLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + + ++T++ GYA+     +A+  +L+   ++++ P    +  +L     VG +++G  
Sbjct: 159 DVVS-WNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMR 217

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IHGQ+I N    D+F  T +++MY KCG++++A  +F ++P ++ V WN +++ +  +G 
Sbjct: 218 IHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGD 277

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM---RAGFDSIVNV 276
            E AL+L   M  E  + D IT VS+L A ++ G   +  A   + M     G    +  
Sbjct: 278 GEKALELFREMKAERVKPDHITFVSLLSACSHSG--LVSDAQWCFNMMEEEYGIKPSLKH 335

Query: 277 STALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
              +VD++ + G +E A      M  + +  +W +++ A    GN E      +++ +  
Sbjct: 336 YGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE-- 393

Query: 336 VEPTNV 341
           V+  NV
Sbjct: 394 VDSENV 399


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/703 (36%), Positives = 414/703 (58%), Gaps = 37/703 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPE 201
           LL+ C  + ++   K+IH   I  G S D      V+      + G++  A ++FD +P+
Sbjct: 13  LLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ 69

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
             L  WNT++ G+++    +  + +   M     + D  T   +L       +L+ GK +
Sbjct: 70  PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
             +A++ GFDS + V  A + M++ C  V+ AR VFD   +  VV+WN M++ Y      
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQF 189

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           +++  +F +M  +GV P +VT++  L AC+ L DLE G  ++K ++   +  ++ + N L
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN------------------ 423
           I M++ C ++D A  +F  ++ + ++SW +++ G+A  G+++                  
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309

Query: 424 -------------EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
                        EAL  F +M+  N+KPD FTMVS++ A A L  +   +W+   + ++
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 369

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
             + + FV  ALIDMY KCG VG A+ +F  M+ +   TW  MI G   +G G+ A+ +F
Sbjct: 370 SIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMF 429

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           + M+E    P++IT++  + AC+H+G+VE+G  +F S+   +GI+P + HYG MVDLLGR
Sbjct: 430 SNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGR 489

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGRL EA + I  MP++P   V+G++LGAC++HKNV+L E AA ++ EL+P+ G  +VLL
Sbjct: 490 AGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLL 549

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
            NIYAA   W+ L +VR +M ++G++KTPGCSL+EL   V+ F +G   HPQSK IY  L
Sbjct: 550 CNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609

Query: 711 ETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E ++ ++  AGY PDT+ +  D+ +  +E  L  HSEKLAIA+ L++S PG TI I KNL
Sbjct: 610 ENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNL 669

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           R+C DCH+  K +S    RE+IVRD  RFH F++G CSC ++W
Sbjct: 670 RMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 254/545 (46%), Gaps = 76/545 (13%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS--LSDAARVFEPIPDKLD 103
           LLE C S+ +L++I    IK GL    LFQ ++++  C + S  +  A +VF+ IP    
Sbjct: 13  LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTL 72

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            +++TM+KGY++     + VS  + M   ++ P  + + +LLK       ++ GK +   
Sbjct: 73  FIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNH 132

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            + +GF  +LF     ++M++ C  ++ A K+FD     ++V+WN +++G+ +    + +
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKS 192

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             L   M + G   + +T+V +L A + +  L  GK ++ Y      +  + +   L+DM
Sbjct: 193 KMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDM 252

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-----------PE---------- 322
           +A CG ++ A+ VFD MK+R+V+SW S++  +   G            PE          
Sbjct: 253 FAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMI 312

Query: 323 ----------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
                     EA+ +F++M    V+P   T++  L ACA LG LE G +V   +D+  + 
Sbjct: 313 DGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK 372

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + N+LI MY KC  V +A  +F ++  K   +W AMI+G A NG   EAL  F  M
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM 432

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
              +I PD  T + V+ A             HA                        G V
Sbjct: 433 IEASITPDEITYIGVLCACT-----------HA------------------------GMV 457

Query: 493 GTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
              ++ F  M  +H     VT +  M+D  G  G  + A E+   M   P KPN I +  
Sbjct: 458 EKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM---PVKPNSIVWGS 514

Query: 548 AISAC 552
            + AC
Sbjct: 515 LLGAC 519



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 4/267 (1%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +V+ F     +  A + F+ IP++    +  M+ GY +     +A++    M+  +V 
Sbjct: 278 TSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVK 337

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  +G +  G+ +   +  N    D F    +++MY KCG + +A K+
Sbjct: 338 PDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKV 397

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  M  +D  +W  ++ G A NG  E AL + + M E     D IT + +L A  + G +
Sbjct: 398 FKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMV 457

Query: 256 RIGKAVH-GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
             G++      M+ G    V     +VD+  + GR+E A  V   M  + N + W S++ 
Sbjct: 458 EKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLG 517

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           A     N + A    +++L+  +EP N
Sbjct: 518 ACRVHKNVQLAEMAAKQILE--LEPEN 542


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/656 (39%), Positives = 392/656 (59%), Gaps = 1/656 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K IH +L+      D + +  ++      G    +  +F ++ E ++  WNT++ G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + A+ L   M   G   +  TI  +L A A    +R+G  +H   ++AG+D  V V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+ +Y KC   + A  VFD +  +NVVSW ++I  Y+  G+  EA+  F+K+L+ G++
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P + ++++ L ACA LGD   G ++ + +    +G +V +  SL+ MY KC  ++RA  I
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           FS +  K +VSW+ MI GYA NG   +AL+ F +M+S+N+KPD +TMV V+ A A L  +
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
               W  +L+ R+ F  N  + TALIDMY+KCG+V  A  +F  M ++    WN M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G  KA   LF+ + +   +P++ TF+  +  C+H G V EG  +F ++K+ + + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG MVDLLGRAG LNEA   I  MP++P   V+GA+LG CK+HK+  L E+   +L 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           EL+P   G +V L+NIY+    W++  K+R+ M+++ +QK   CS +E+   VH F  G 
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
             H  S++IY  L+ L  E+KA G+VP T  +  D+E+  +E+ L  HSEKLA+AFGL+ 
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S P   I + KNLRVCGDCH+A K IS +T REII+RD +RFH F +G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 233/470 (49%), Gaps = 37/470 (7%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           + S + +  VF  + +    L++TM++G       DDA+     MR     P  +   ++
Sbjct: 61  FGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFV 120

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           LK C    ++R G +IH  L+  G+  D+F  T ++++Y KC   ++A K+FD +P++++
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSW  I+ G+  +G    A+    ++ E G + D  ++V +L A A +G    G+ +  Y
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
              +G    V V+T+L+DMY KCG +E A L+F  M  +++VSW++MI  Y   G P++A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F +M  + ++P   T++  L ACA LG L+ GI+   L+D+ +  ++  +  +LI M
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           YSKC  V +A +IF+ ++ K  V WNAM++G + NG      + F  +    I+PD  T 
Sbjct: 361 YSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKCGAVGTARALFDMM 502
           + ++        +           R  F   K VF +T  I+ Y                
Sbjct: 421 IGLLCGCTHGGFVNEG--------RQFFNNMKRVFSLTPSIEHYG--------------- 457

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
                     M+D  G  GL   A +L N M   P KPN + +   +  C
Sbjct: 458 ---------CMVDLLGRAGLLNEAHQLINNM---PMKPNAVVWGALLGGC 495



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 53/117 (45%)

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L+     K IHA ++R   +++ +++  ++      G+   ++ +F  + E ++  WN M
Sbjct: 26  LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           I G  +      A+ L+  M  G   PN+ T    + AC+    V  G+   + L K
Sbjct: 86  IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/675 (40%), Positives = 413/675 (61%), Gaps = 18/675 (2%)

Query: 154 IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMF-DRMPER-DLVSWNT 209
           +R G+E H   + NG       FA   +++MYA+ G + +A ++F    P R D+V+WNT
Sbjct: 184 VRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT 243

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V+   Q+G  + A+  +  M   G R D +T  S LPA + +  L +G+ +H Y ++  
Sbjct: 244 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD- 302

Query: 270 FDSIVN---VSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEA 324
            D +     V++ALVDMYA   +V  AR VFD +    + +  WN+MI  Y + G  EEA
Sbjct: 303 -DELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 361

Query: 325 MRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +R+F +M  + G  P   T+   L ACA          VH  + +  +  +  + N+L+ 
Sbjct: 362 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 421

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS---KNIKPD 440
           MY++  K D A  IF+ +    +VSWN +I G    G V +A     +M+      + P+
Sbjct: 422 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 481

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           + T+++++P  A L+     K IH   +R   + +V V +AL+DMYAKCG +  +RA+FD
Sbjct: 482 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 541

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVE 559
            +  R+  TWNV+I  YG HGLG  A  LF++M   G  +PN++TF+ A++ACSHSG+V+
Sbjct: 542 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 601

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLG 618
            G+  F ++++D+G+EP  D    +VD+LGRAGRL+EA+  +  M   E  ++ +  MLG
Sbjct: 602 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 661

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++H+NV LGE A  RL EL+P+E  ++VLL NIY+AA  W + A+VR+ M ++G+ K 
Sbjct: 662 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 721

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PGCS +E+   +H F +G + HP S+ ++  +E L  E+ A GY PDT+ + HD++D  +
Sbjct: 722 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 781

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L  HSEKLAIAFGLL ++PG+TI + KNLRVC DCH A K++S + GREI++RD+ R
Sbjct: 782 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 841

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG CSCGDYW
Sbjct: 842 FHHFRNGQCSCGDYW 856



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 27/423 (6%)

Query: 244 SILPAVANVGSLR---IGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++ PA+ +  +LR     +A+H  A+R G        V+ AL+  YA+CGR+  A  VF 
Sbjct: 61  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120

Query: 299 GM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG-- 354
            +   + + VS+NS+I+A       + A+   + ML  G   T+ T++  L A + L   
Sbjct: 121 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 180

Query: 355 ----DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGK-TLVS 408
                L R      L + L  G      N+L+SMY++   V  A  +F+    G+  +V+
Sbjct: 181 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 240

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN M+    Q+G  +EA+     M +  ++PD  T  S +PA + L ++   + +HA VI
Sbjct: 241 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 300

Query: 469 RSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNVMIDGYGTHGLGKA 525
           +      N FV +AL+DMYA    VG AR +FDM+ +  + +  WN MI GY   G+ + 
Sbjct: 301 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 360

Query: 526 AVELFNKM-LEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYGIEPVMDHYG 582
           A+ LF +M  E    P + T    + AC+ S     +E +H +   +   G   V +   
Sbjct: 361 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN--- 417

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
           A++D+  R G+ + A      + + P +  +  ++  C +  +V    + A  + +L  +
Sbjct: 418 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQL--E 474

Query: 643 EGG 645
           EGG
Sbjct: 475 EGG 477



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLD 120
           ++K G+      Q  L+ ++ +      A R+F    +PD +   ++T++ G      + 
Sbjct: 404 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS--WNTLITGCVVQGHVA 461

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           DA      M+  +   VV N   L+ +   C  +    RGKEIHG  + +    D+   +
Sbjct: 462 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 521

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-R 236
            +V+MYAKCG +  +  +FDR+P R+ ++WN ++  +  +G    A  L  RM   G  R
Sbjct: 522 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 581

Query: 237 GDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            + +T ++ L A ++ G +  G +  H      G +   ++   +VD+  + GR++ A  
Sbjct: 582 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 641

Query: 296 VFDGMKS--RNVVSWNSMIAA 314
           +   M++  + V +W++M+ A
Sbjct: 642 MVTSMETGEQQVSAWSTMLGA 662


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/675 (40%), Positives = 413/675 (61%), Gaps = 18/675 (2%)

Query: 154 IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMF-DRMPER-DLVSWNT 209
           +R G+E H   + NG       FA   +++MYA+ G + +A ++F    P R D+V+WNT
Sbjct: 182 VRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT 241

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V+   Q+G  + A+  +  M   G R D +T  S LPA + +  L +G+ +H Y ++  
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD- 300

Query: 270 FDSIVN---VSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEA 324
            D +     V++ALVDMYA   +V  AR VFD +    + +  WN+MI  Y + G  EEA
Sbjct: 301 -DELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 359

Query: 325 MRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +R+F +M  + G  P   T+   L ACA          VH  + +  +  +  + N+L+ 
Sbjct: 360 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 419

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS---KNIKPD 440
           MY++  K D A  IF+ +    +VSWN +I G    G V +A     +M+      + P+
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           + T+++++P  A L+     K IH   +R   + +V V +AL+DMYAKCG +  +RA+FD
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVE 559
            +  R+  TWNV+I  YG HGLG  A  LF++M   G  +PN++TF+ A++ACSHSG+V+
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLG 618
            G+  F ++++D+G+EP  D    +VD+LGRAGRL+EA+  +  M   E  ++ +  MLG
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 659

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++H+NV LGE A  RL EL+P+E  ++VLL NIY+AA  W + A+VR+ M ++G+ K 
Sbjct: 660 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 719

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PGCS +E+   +H F +G + HP S+ ++  +E L  E+ A GY PDT+ + HD++D  +
Sbjct: 720 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 779

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L  HSEKLAIAFGLL ++PG+TI + KNLRVC DCH A K++S + GREI++RD+ R
Sbjct: 780 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 839

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG CSCGDYW
Sbjct: 840 FHHFRNGQCSCGDYW 854



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 27/423 (6%)

Query: 244 SILPAVANVGSLR---IGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++ PA+ +  +LR     +A+H  A+R G        V+ AL+  YA+CGR+  A  VF 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 299 GM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG-- 354
            +   + + VS+NS+I+A       + A+   + ML  G   T+ T++  L A + L   
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 355 ----DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGK-TLVS 408
                L R      L + L  G      N+L+SMY++   V  A  +F+    G+  +V+
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN M+    Q+G  +EA+     M +  ++PD  T  S +PA + L ++   + +HA VI
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 469 RSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNVMIDGYGTHGLGKA 525
           +      N FV +AL+DMYA    VG AR +FDM+ +  + +  WN MI GY   G+ + 
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358

Query: 526 AVELFNKM-LEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYGIEPVMDHYG 582
           A+ LF +M  E    P + T    + AC+ S     +E +H +   +   G   V +   
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN--- 415

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
           A++D+  R G+ + A      + + P +  +  ++  C +  +V    + A  + +L  +
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQL--E 472

Query: 643 EGG 645
           EGG
Sbjct: 473 EGG 475



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLD 120
           ++K G+      Q  L+ ++ +      A R+F    +PD +   ++T++ G      + 
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS--WNTLITGCVVQGHVA 459

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           DA      M+  +   VV N   L+ +   C  +    RGKEIHG  + +    D+   +
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-R 236
            +V+MYAKCG +  +  +FDR+P R+ ++WN ++  +  +G    A  L  RM   G  R
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 237 GDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            + +T ++ L A ++ G +  G +  H      G +   ++   +VD+  + GR++ A  
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639

Query: 296 VFDGMKS--RNVVSWNSMIAA 314
           +   M++  + V +W++M+ A
Sbjct: 640 MVTSMETGEQQVSAWSTMLGA 660


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/656 (39%), Positives = 391/656 (59%), Gaps = 1/656 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K IH +L+      D + +  ++      G    +  +F ++ E ++  WNT++ G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + A+ L   M   G   +  TI  +L A A    +R+G  +H   ++AG+D  V V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+ +Y KC   + A  VFD +  +NVVSW ++I  Y+  G+  EA+  F+K+L+ G++
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P + ++++ L ACA LGD   G ++ + +    +G +V +  SL+ MY KC  ++RA  I
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           FS +  K +VSW+ MI GYA NG   +AL+ F +M+S+N+KPD +TMV V+ A A L  +
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
               W  +L+ R+ F  N  + TALIDMY+KCG+V  A  +F  M  +    WN M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G  KA   LF+ + +   +P++ TF+  +  C+H G V EG  +F ++K+ + + P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG MVDLLGRAG LNEA   I  MP++P   V+GA+LG CK+HK+  L E+   +L 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           EL+P   G +V L+NIY+    W++  K+R+ M+++ +QK   CS +E+   VH F  G 
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
             H  S++IY  L+ L  E+KA G+VP T  +  D+E+  +E+ L  HSEKLA+AFGL+ 
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S P   I + KNLRVCGDCH+A K IS +T REII+RD +RFH F +G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 233/470 (49%), Gaps = 37/470 (7%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           + S + +  VF  + +    L++TM++G       DDA+     MR     P  +   ++
Sbjct: 61  FGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFV 120

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           LK C    ++R G +IH  L+  G+  D+F  T ++++Y KC   ++A K+FD +P++++
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSW  I+ G+  +G    A+    ++ E G + D  ++V +L A A +G    G+ +  Y
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
              +G    V V+T+L+DMY KCG +E A L+F  M  +++VSW++MI  Y   G P++A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F +M  + ++P   T++  L ACA LG L+ GI+   L+D+ +  ++  +  +LI M
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           YSKC  V +A +IF+ ++ K  V WNAM++G + NG      + F  +    I+PD  T 
Sbjct: 361 YSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKCGAVGTARALFDMM 502
           + ++        +           R  F   K VF +T  I+ Y                
Sbjct: 421 IGLLCGCTHGGFVNEG--------RQFFNNMKRVFSLTPSIEHYG--------------- 457

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
                     M+D  G  GL   A +L N M   P KPN + +   +  C
Sbjct: 458 ---------CMVDLLGRAGLLNEAHQLINNM---PMKPNAVVWGALLGGC 495



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 53/117 (45%)

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L+     K IHA ++R   +++ +++  ++      G+   ++ +F  + E ++  WN M
Sbjct: 26  LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           I G  +      A+ L+  M  G   PN+ T    + AC+    V  G+   + L K
Sbjct: 86  IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/689 (38%), Positives = 392/689 (56%), Gaps = 39/689 (5%)

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKC 186
           R+R+D +   V++      +      I+   ++H ++++N    +D      ++  Y+  
Sbjct: 25  RIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQ 84

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G+   A  +FDR  E+++V +N ++  +  N     AL +   M       D  T   +L
Sbjct: 85  GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVL 144

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A + + +LR+G  VH   ++ G D+ + +  ALV MY KCG +  AR V D M  R+VV
Sbjct: 145 KACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVV 204

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWNSM+A Y + G  ++A+ I ++M                                   
Sbjct: 205 SWNSMVAGYAQSGQFDDALEICKEM----------------------------------- 229

Query: 367 DQLKLGTDVSMTNSL--ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           D L L  D     SL  +  Y+  + V    ++F ++  K L+SWN MI  Y  N   NE
Sbjct: 230 DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A++ F +M    +KPD+ T+ S++PA  +LS +   + +H  + +     N+ +  AL+D
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLD 349

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG +  AR +FD M  R V +W  M+  YG  G G  AV LF KML+    P+ I 
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  +SACSH+GL+++G HYF  + + YGI P ++H+  MVDL GRAG + EA+ FI++M
Sbjct: 410 FVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 469

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P+EP   V+GA+L AC++H  +++G  AA+ LF+L P + GY+VLL+NIYA A MW  + 
Sbjct: 470 PMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVM 529

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
            VR  M+K G++K PG S VEL  +VH+F +G   HPQ+K IY  L+ L+ ++K  GY+P
Sbjct: 530 NVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIP 589

Query: 725 DTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
            T S +HDVE   +E  L+ HSEKLAI F +LN+  G+ I I KNLRVCGDCH A K IS
Sbjct: 590 QTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLIS 649

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  R IIVRD +RFH F NG+CSCGDYW
Sbjct: 650 KIVSRNIIVRDCNRFHHFSNGICSCGDYW 678


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/631 (41%), Positives = 382/631 (60%), Gaps = 35/631 (5%)

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YA CG+      +FD + ++++V +N ++  +  NG  + AL +   M  +G   D  T 
Sbjct: 81  YAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTY 140

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             +L A +  G+L +G  +HG  ++ G D  + +   LV MY KC  ++ AR V D M  
Sbjct: 141 PCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPG 200

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R++VSWNSM+A Y + G   +A+++ ++M D  ++P   T+   L A             
Sbjct: 201 RDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA------------- 247

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
                         +TN+       C  V    D+F KL+ K+L+SWN MI  Y  N   
Sbjct: 248 --------------VTNT------SCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMP 287

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           NEA++ + +M+   ++PD+ ++ SV+PA  +LS     + IH  V R     N+ +  AL
Sbjct: 288 NEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENAL 347

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMYAKCG +  ARA+FD M  R V +W  MI  YG  G GK AV LF KM +    P+ 
Sbjct: 348 IDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDW 407

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           I F+  ++ACSH+GLV+EG + F +L  +YGI P ++HY  MVDLLGRAG+++EA+   +
Sbjct: 408 IAFVSVLAACSHAGLVDEGRYCF-NLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTR 466

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           +MP+EP   V+G++L AC+++ ++ +   AA+ LF+L P++ GY+VLL+NIYA A  W  
Sbjct: 467 QMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQD 526

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  VR+IM  KG++K PG S VE+ + V++F +G   H QSK IY  L  L+  +K  GY
Sbjct: 527 VETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGY 586

Query: 723 VPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           +P+T+S +HDVE+  +E  L+ HSEKLAI F +LN+ PGSTI I KN+RVCGDCH ATK 
Sbjct: 587 MPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKL 646

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS +  REII+RD HRFH F++GVCSCGDYW
Sbjct: 647 ISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 229/512 (44%), Gaps = 76/512 (14%)

Query: 46  LLEVCTSLKELRRI-LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           +L+V    K L+++   ++I   L        KL+  +           +F+ I DK   
Sbjct: 44  ILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVV 103

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
            ++ M++ Y       DA+     M      P  Y Y  +LK C   G +  G +IHG +
Sbjct: 104 FFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAV 163

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  G  ++L+   G+V+MY KC  ++ A ++ D MP RD+VSWN++VAG+AQNG    AL
Sbjct: 164 VKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDAL 223

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            L   M +   + D  T+ S+LPAV N                                 
Sbjct: 224 KLCREMEDLKLKPDAGTMGSLLPAVTNTS------------------------------- 252

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
             C  V   + +F  +K ++++SWN MIA YV    P EA+ ++ +M   GVEP  V+I 
Sbjct: 253 --CDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSIS 310

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L AC DL     G  +H+ +++ KL  ++ + N+LI MY+KC  +  A  +F ++  +
Sbjct: 311 SVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFR 370

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +VSW +MI  Y  +G+  +A+  F KMR     PD    VSV+ A +           H
Sbjct: 371 DVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACS-----------H 419

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT----WNVMIDGYGTH 520
           A                        G V   R  F++M E  +T     +N M+D  G  
Sbjct: 420 A------------------------GLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRA 455

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           G    A  L  +M   P +PN+  +   +SAC
Sbjct: 456 GKIDEAYHLTRQM---PMEPNERVWGSLLSAC 484


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/675 (40%), Positives = 413/675 (61%), Gaps = 18/675 (2%)

Query: 154 IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMF-DRMPER-DLVSWNT 209
           +R G+E H   + NG       FA   +++MYA+ G + +A ++F    P R D+V+WNT
Sbjct: 182 VRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT 241

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V+   Q+G  + A+  +  M   G R D +T  S LPA + +  L +G+ +H Y ++  
Sbjct: 242 MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD- 300

Query: 270 FDSIVN---VSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEA 324
            D +     V++ALVDMYA   +V  AR VFD +    + +  WN+MI  Y + G  EEA
Sbjct: 301 -DELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 359

Query: 325 MRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +R+F +M  + G  P   T+   L ACA          VH  + +  +  +  + N+L+ 
Sbjct: 360 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 419

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS---KNIKPD 440
           MY++  K D A  IF+ +    +VSWN +I G    G V +A     +M+      + P+
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           + T+++++P  A L+     K IH   +R   + +V V +AL+DMYAKCG +  +RA+FD
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVE 559
            +  R+  TWNV+I  YG HGLG  A  LF++M   G  +PN++TF+ A++ACSHSG+V+
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLG 618
            G+  F ++++D+G+EP  D    +VD+LGRAGRL+EA+  +  M   E  ++ +  MLG
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 659

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++H+NV LGE A  RL EL+P+E  ++VLL NIY+AA  W + A+VR+ M ++G+ K 
Sbjct: 660 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 719

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PGCS +E+   +H F +G + HP S+ ++  +E L  E+ A GY PDT+ + HD++D  +
Sbjct: 720 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 779

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L  HSEKLAIAFGLL ++PG+TI + KNLRVC DCH A K++S + GREI++RD+ R
Sbjct: 780 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 839

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG CSCGDYW
Sbjct: 840 FHHFRNGQCSCGDYW 854



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 27/423 (6%)

Query: 244 SILPAVANVGSLR---IGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++ PA+ +  +LR     +A+H  A+R G        V+ AL+  YA+CGR+  A  VF 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 299 GM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG-- 354
            +   + + VS+NS+I+A       + A+   + ML  G   T+ T++  L A + L   
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 355 ----DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGK-TLVS 408
                L R      L + L  G      N+L+SMY++   V  A  +F+    G+  +V+
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN M+    Q+G  +EA+     M +  ++PD  T  S +PA + L ++   + +HA VI
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 469 RSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMNE--RHVTTWNVMIDGYGTHGLGKA 525
           +      N FV +AL+DMYA    VG AR +FDM+ +  + +  WN MI GY   G+ + 
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358

Query: 526 AVELFNKM-LEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYGIEPVMDHYG 582
           A+ LF +M  E    P + T    + AC+ S     +E +H +   +   G   V +   
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN--- 415

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
           A++D+  R G+ + A      + + P +  +  ++  C +  +V    + A  + +L  +
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQL--E 472

Query: 643 EGG 645
           EGG
Sbjct: 473 EGG 475



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLD 120
           ++K G+      Q  L+ ++ +      A R+F    +PD +   ++T++ G      + 
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS--WNTLITGCVVQGHVA 459

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           DA      M+  +   VV N   L+ +   C  +    RGKEIHG  + +    D+   +
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-R 236
            +V+MYAKCG +  +  +FDR+P R+ ++WN ++  +  +G    A  L  RM   G  R
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 237 GDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            + +T ++ L A ++ G +  G +  H      G +   ++   +VD+  + GR++ A  
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639

Query: 296 VFDGMKS--RNVVSWNSMIAA 314
           +   M++  + V +W++M+ A
Sbjct: 640 MVTSMEAGEQQVSAWSTMLGA 660


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/649 (41%), Positives = 395/649 (60%), Gaps = 10/649 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   ++  YAK  +   A+++FD++PE DLVS+NT+++ +A  G    AL L + M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E G   D  T+ +++ A  +   L IG+ +H  A+ +GFDS V+V+ AL+  Y K G ++
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A+ VF GM   R+ VSWNSMI AY +     +A+ +FQ+M+ +G+     T+   L A 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSKLQGKTLVSW 409
             L DL  G+  H  L +     +  + + LI +YSKC   +     +F ++    LV W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 410 NAMILGYAQNGR-VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           N M+ GY+QN   + +AL  F +M+    +P+  + V VI A + LS     K IH+L +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 469 RSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +S    N + V  ALI MY+KCG +  AR LFD M E +  + N MI GY  HG+   ++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF  MLE    P  ITF+  +SAC+H+G VEEG +YF  +K+ + IEP  +HY  M+DL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG+L+EA + I +MP  PG   + ++LGAC+ H N+EL  KAAN++ +L+P     +
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           V+L+N+YA+A  W+++A VR  M  +G++K PGCS +E+K  +H F +  + HP  K IY
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610

Query: 708 TFLETLIDEIKAAGYVPDTNSIHDVEDYV----QENLLSSHSEKLAIAFGLLNSSPGSTI 763
            FLE +  ++K AGYVPD       +D      +E  L  HSEKLA+AFGL+++  G  +
Sbjct: 611 EFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPV 670

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + KNLR+CGDCHNA K+IS + GREI VRD HRFHCFK G CSCGDYW
Sbjct: 671 LVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 249/520 (47%), Gaps = 19/520 (3%)

Query: 26  HTLSQRAYIPSRIYRHPSALLL-EVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFC 83
           H+L  +++IP   Y     +LL   C  L   R+         + D ++F    +++ + 
Sbjct: 31  HSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAF-----QDISDPNVFSFNAIIAAYA 85

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K +    A ++F+ IP+     Y+T++  YA       A+     MR   +    +  + 
Sbjct: 86  KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSA 145

Query: 144 LLKV-CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE- 201
           ++   C DVG I    ++H   + +GF   +     ++  Y K G +++A ++F  M   
Sbjct: 146 VITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGI 202

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           RD VSWN+++  + Q+     AL L   M   G   D  T+ S+L A   +  L  G   
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           HG  ++ GF    +V + L+D+Y+KC G +   R VF+ +   ++V WN+M++ Y +   
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEE 322

Query: 321 -PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMT 378
             E+A+  F++M   G  P + + +  + AC++L    +G  +H L  +  + ++ +S+ 
Sbjct: 323 FLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD 382

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+LI+MYSKC  +  A  +F ++     VS N+MI GYAQ+G   E+L+ F  M  + I 
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTAR 496
           P S T +SV+ A A    +    W +  +++  F  E      + +ID+  + G +  A 
Sbjct: 443 PTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            L   M        W  ++    THG  + AV+  N++L+
Sbjct: 502 NLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 207/406 (50%), Gaps = 9/406 (2%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           SA++   C  +  + ++  + + SG          L++ + K   L DA RVF  +    
Sbjct: 144 SAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + +++M+  Y +      A+     M    +   ++    +L     + ++  G + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GF 219
           GQLI  GF  +    +G++++Y+KC G + +  K+F+ + E DLV WNT+V+G++QN  F
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEF 323

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNVST 278
            E AL+   +M   G R +  + V ++ A +N+ S   GK +H  A+++   S  ++V  
Sbjct: 324 LEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN 383

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+ MY+KCG ++ AR +FD M   N VS NSMIA Y + G   E++ +FQ ML++ + P
Sbjct: 384 ALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAP 443

Query: 339 TNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           T++T +  L ACA  G +E G  + + + ++  +  +    + +I +  +  K+  A ++
Sbjct: 444 TSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENL 503

Query: 398 FSKLQ-GKTLVSWNAMILGYAQNGRVN---EALNYFCKMRSKNIKP 439
            +++      + W +++     +G +    +A N   ++   N  P
Sbjct: 504 IARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 46/389 (11%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  GK++H   +++        S   + +Y+KCGR+  AR  F  +   NV S+N++IAA
Sbjct: 24  LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y +   P  A ++F    DQ  EP  V+    + A AD G+    + +   + ++ L  D
Sbjct: 84  YAKESRPLIAHQLF----DQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139

Query: 375 ---------------------------------VSMTNSLISMYSKCKKVDRAADIFSKL 401
                                            VS+ N+L++ Y K   +D A  +F  +
Sbjct: 140 XFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199

Query: 402 QG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            G +  VSWN+MI+ Y Q+   ++AL  F +M  + +  D FT+ SV+ A   L  +   
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              H  +I++ F +N  V + LID+Y+KC G +   R +F+ + E  +  WN M+ GY  
Sbjct: 260 LQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQ 319

Query: 520 H-GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEP 576
           +    + A+E F +M     +PND +F+C ISACS+     +G  IH   +LK D     
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL-ALKSDIPSNR 378

Query: 577 V-MDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           + +D+  A++ +  + G L +A     +M
Sbjct: 379 ISVDN--ALIAMYSKCGNLQDARRLFDRM 405



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 101/260 (38%), Gaps = 45/260 (17%)

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA----------- 395
           L  C    DL  G  +H L  +  +      +N  I +YSKC ++  A            
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74

Query: 396 --------------------DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
                                +F ++    LVS+N +I  YA  G    AL  F  MR  
Sbjct: 75  FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            +  D FT+ +VI A  +   +     +H++ + S F+  V V  AL+  Y K G +  A
Sbjct: 135 GLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192

Query: 496 -RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS- 553
            R  + M   R   +WN MI  YG H  G  A+ LF +M+      +  T    ++A + 
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252

Query: 554 ----------HSGLVEEGIH 563
                     H  L++ G H
Sbjct: 253 LEDLSGGLQFHGQLIKTGFH 272


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/830 (35%), Positives = 439/830 (52%), Gaps = 83/830 (10%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L + RR+L   I       H     +++ + K   LSDA  +F  +P +  A ++T+
Sbjct: 52  CGALPDARRLLLTDIAHPNVITH---NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTL 108

Query: 110 LKGYAK----FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + GY +     ASL+   SF+   R  D +P  + + Y +K CG +GE     ++ G + 
Sbjct: 109 MSGYFQSQQYLASLE---SFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ 165

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIE-------------------------------EAYK 194
             G   D      +V+M+ +CG ++                                A +
Sbjct: 166 KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALE 225

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD MPERD+VSWN +V+  +Q+G    ALD+V  M  +G R D  T  S L A A + S
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR GK +H   +R        V++ALV++YAKCG  + A+ VF+ +  RN V+W  +IA 
Sbjct: 286 LRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           +++ G   E++ +F +M  + +      +   +  C    DL  G  +H L  +      
Sbjct: 346 FLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V ++NSLISMY+KC  +  A  IF  +  K +VSW +MI  ++Q G + +A  +F  M +
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMST 465

Query: 435 KNI--------------------------------KPDSFTMVSVIPALAELSVIRYAKW 462
           KN+                                +PD  T V++    A+L   +    
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQ 525

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           I    ++     +  V  A+I MY+KCG +  AR +FD +N + + +WN MI GY  HG+
Sbjct: 526 IIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 585

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           GK A+E+F+ +L+   KP+ I+++  +S CSHSGLV+EG  YF  +K+ + I P ++H+ 
Sbjct: 586 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFS 645

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGRAG L EA D I +MP++P   V+GA+L ACKIH N EL E AA  +FELD  
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSP 705

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G ++L+A IYA A   D  A++R +M  KG++K PG S +E+ N+VH F +    HPQ
Sbjct: 706 DSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQ 765

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
              I   L+ L+++I   GYV   +   ++           HSEKLA+AFGL++      
Sbjct: 766 VIAIRKKLDELMEKIARLGYVRTDSPRSEIH----------HSEKLAVAFGLMSLPAWMP 815

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IHI KNLR+CGDCH   K IS VTGRE ++RD  RFH F  G CSCGDYW
Sbjct: 816 IHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 214/480 (44%), Gaps = 68/480 (14%)

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKC--------------------------------GQ 188
           HG+L+  G +  +F    +++ Y  C                                G+
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILP 247
           + +A ++F RMP RD+ SWNT+++G+ Q+     +L+    MH  G    +  T    + 
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RL----------- 295
           +   +G   +   + G   + G     +V+ ALVDM+ +CG V+ A RL           
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206

Query: 296 -------------------VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
                              +FD M  R+VVSWN M++A  + G   EA+ +   M  +GV
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
              + T   +L ACA L  L  G  +H  + +     D  + ++L+ +Y+KC     A  
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F+ L  +  V+W  +I G+ Q+G   E++  F +MR++ +  D F + ++I        
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   + +H+L ++S   + V V  +LI MYAKC  + +A ++F  MNE+ + +W  MI  
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           +   G    A E F    +G +  N IT+   + A    G  E+G+  +  +  +  + P
Sbjct: 447 HSQVGNIAKAREFF----DGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/710 (38%), Positives = 399/710 (56%), Gaps = 37/710 (5%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + Y  L+     +G I   + +  ++       + F+   +++ Y+K G +    ++
Sbjct: 38  PETFLYNNLINAYSKLGNITYARHVFDKMP----QPNSFSWNTMLSAYSKSGDLSTMQEI 93

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGS 254
           F  MP RD VSWN++++G+   G    A+     M ++G    + IT  ++L  V++ G 
Sbjct: 94  FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC 153

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD---------------- 298
           + +G+ +HG  ++ GF + V V ++LVDMYAK G V  A  VFD                
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITG 213

Query: 299 ---------------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
                          GMK R+ +SW +MI   ++ G   EAM +F+ M  +G+     T 
Sbjct: 214 LLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTF 273

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L AC  L  L+ G  +H L+ +     +V + ++L+ MY KC+ V  A  +F ++  
Sbjct: 274 GSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN 333

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           K +VSW AM++GY QNG   EA+  FC M+   I+PD FT+ SVI + A L+ +      
Sbjct: 334 KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQF 393

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H   + S     + V  ALI +Y KCG++  +  LFD M+ R   +W  ++ GY   G  
Sbjct: 394 HCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKA 453

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
              ++LF +ML    KP+ +TF+  +SACS +GLVE G  YF S+ KD+GI P  DHY  
Sbjct: 454 NETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTC 513

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DL GRAGRL EA +FI KMP  P    +  +L +C+++ N E+G+ AA  L ELDP  
Sbjct: 514 MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQN 573

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              ++LL++IYAA   W  +A++R  M +KG +K PG S ++ K++V+ F +     P S
Sbjct: 574 PAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFS 633

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            +IY  LE L  ++   GYVPD +S+ HDVED  +  +L+ HSEKLAIAFGLL    G  
Sbjct: 634 DQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLP 693

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I + KNLRVCGDCHNATKYIS ++ REI+VRD  RFH FK+G CSCGD+W
Sbjct: 694 IRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 269/566 (47%), Gaps = 72/566 (12%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           + +++  LIIKS    +      L++ + K  +++ A  VF+ +P      ++TML  Y+
Sbjct: 23  QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82

Query: 115 KFASLD------------DAVSF--LIR--MRYDDVAPVVYNYTYLLK------------ 146
           K   L             D VS+  LI   + Y  V   V  Y  ++K            
Sbjct: 83  KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142

Query: 147 ----VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR---- 198
               +    G +  G++IHGQ++  GF   +F  + +V+MYAK G +  A ++FD     
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202

Query: 199 ---------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
                                      M ERD +SW T++ G  QNG    A+DL   M 
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           +EG   D  T  S+L A   + +L+ GK +H   +R+G++  V V +ALVDMY KC  V 
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A  VF  M ++NVVSW +M+  Y + G  EEA+R+F  M   G+EP + T+   + +CA
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           +L  LE G   H       L + ++++N+LI++Y KC  ++ +  +F ++  +  VSW A
Sbjct: 383 NLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRS 470
           ++ GYAQ G+ NE ++ F +M  + +KPD+ T ++V+ A +   ++ R  ++  +++   
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG---YGTHGLGKAA 526
                    T +ID++ + G +  A+   + M        W  ++     YG   +GK A
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWA 562

Query: 527 VELFNKMLE-GPTKPNDITFLCAISA 551
            E    +LE  P  P     L +I A
Sbjct: 563 AE---SLLELDPQNPAGYILLSSIYA 585



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +LKE + I  LII+SG        + LV ++CK  S+  A  VF+ + +K    +  ML 
Sbjct: 285 ALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLV 344

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    ++AV     M+ + + P  +    ++  C ++  +  G + H Q +V+G   
Sbjct: 345 GYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLIS 404

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     ++ +Y KCG IE++ ++FD M  RD VSW  +V+G+AQ G A   +DL  RM 
Sbjct: 405 FITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERML 464

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
            +G + D +T +++L A +  G +  G+      ++  G     +  T ++D++ + GR+
Sbjct: 465 VQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRL 524

Query: 291 ETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIMEALH 348
           E A+   + M  S + + W +++++    GN E      + +L+   + P    ++ +++
Sbjct: 525 EEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIY 584

Query: 349 AC----ADLGDLERGI 360
           A     +++  L RG+
Sbjct: 585 AAKGKWSNVAQLRRGM 600



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
           AK +H L+I+S      F+   LI+ Y+K G +  AR +FD M + +  +WN M+  Y  
Sbjct: 24  AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            G      E+F+ M   P + + +++   IS     G V E +  + S+ KD
Sbjct: 84  SGDLSTMQEIFSIM---PNR-DGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/688 (37%), Positives = 408/688 (59%), Gaps = 5/688 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LLE C S   + ++    +K GL       TKL  L+ +Y SL  A ++FE  P K   L
Sbjct: 10  LLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVA---PVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           ++ +L+ Y       + +S   +M  D +    P  Y  +  LK C  + ++  GK IHG
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            L       D+F  + ++ +Y+KCGQ+ +A K+F   P++D+V W +I+ G+ QNG  EL
Sbjct: 130 FLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPEL 189

Query: 223 ALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           AL   +RM   E    D +T+VS   A A +    +G++VHG+  R GFD+ + ++ +++
Sbjct: 190 ALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSIL 249

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++Y K G + +A  +F  M  ++++SW+SM+A Y + G    A+ +F +M+D+ +E   V
Sbjct: 250 NLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 309

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++ AL ACA   +LE G  +HKL        D++++ +L+ MY KC     A D+F+++
Sbjct: 310 TVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRM 369

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +VSW  +  GYA+ G  +++L  FC M S   +PD+  +V ++ A +EL +++ A 
Sbjct: 370 PKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQAL 429

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +HA V +S F+ N F+  +LI++YAKC ++  A  +F  M  + V TW+ +I  YG HG
Sbjct: 430 CLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHG 489

Query: 522 LGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
            G+ A++LF +M      KPND+TF+  +SACSH+GL+EEGI  F  +  +Y + P  +H
Sbjct: 490 QGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEH 549

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           YG MVDLLGR G L++A D I +MP++ G  V+GA+LGAC+IH+N+++GE AA  LF LD
Sbjct: 550 YGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLD 609

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P+  GY+ LL+NIY     W   AK+RT++++   +K  G S+VE+KNEVHSF +    H
Sbjct: 610 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFH 669

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNS 728
            +S +IY  L  L   +K  GY P   +
Sbjct: 670 GESDQIYGMLRKLDARMKEEGYDPPVQT 697


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/798 (36%), Positives = 452/798 (56%), Gaps = 30/798 (3%)

Query: 41  HPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H    L+  C+ L  L   RRI   I      +  +    L+S++ K  SL DA + F+ 
Sbjct: 142 HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 201

Query: 98  IP--DKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVG- 152
           +P   K D + ++ M+  + +  S  +A+     M  D   P     +  +L  C + G 
Sbjct: 202 LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGL 261

Query: 153 -EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF----DRMPERDLVSW 207
             +   + IHG+++  G   + F  T +V+ Y K G +++A+++F    D  P   LV+ 
Sbjct: 262 LSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTC 321

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA---VHGY 264
           + +++   QNG+ + +L L   M+ EG +   +T+VS+L A +    L++G A   V   
Sbjct: 322 SAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSATAFVLEQ 378

Query: 265 AMRAGFDSIVNV-STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           AM     +  NV  T L+  YA+   +  AR  FD ++S +VVSWN+M AAY++     E
Sbjct: 379 AMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSRE 438

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER---GIFVHKLLDQLKLGTDVSMTNS 380
           A+ +F++ML +GV P+  T + AL ACA          G  +  LL++  L  D ++ N+
Sbjct: 439 ALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANA 498

Query: 381 LISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNI 437
            ++MY+KC  +  A  +F ++    +  ++WN+M+  Y  +G   EA   F  M + K +
Sbjct: 499 TLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV 558

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+  T V+V+ A    + I   + IHA V+ + FE +  +  AL++MYAKCG++  A+A
Sbjct: 559 KPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQA 618

Query: 498 LFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           +FD    N+  V  W  +I GY  +G  + A++LF  M +   +PN +TF+ A++AC+H 
Sbjct: 619 IFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHG 678

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G +E+G    + +  D+GI P   H+  +VDLLGR GRL+EA   +++   +  +  + A
Sbjct: 679 GKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMA 737

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L ACK  K +E GE+ A R+ +LDP+    +++LA++YAAA  W++ A +R  M  KG+
Sbjct: 738 LLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGI 797

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +  PGCS VE+  E+HSF +G   HP+S+ IY  LE L   IKAAGYV DT  + HDV  
Sbjct: 798 RADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQ 857

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E LL  HSEKLAIAFGL+++  GS + + KNLRVC DCH ATK IS VTGR+I++RD
Sbjct: 858 EHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRD 917

Query: 795 MHRFHCFKNGVCSCGDYW 812
             R+H F +G CSCGDYW
Sbjct: 918 SSRYHHFTSGTCSCGDYW 935



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/582 (30%), Positives = 296/582 (50%), Gaps = 32/582 (5%)

Query: 46  LLEVCTSLKELRR--ILPLIIKSGLCDQH---LFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           LL+ C  L+ L++   L   I S   D H      + L+ +  K  +L++A    E + D
Sbjct: 49  LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA----EALAD 104

Query: 101 KLDALYH--TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           +  ++Y    M++ + +    D A+    RM   +V P  +    L+  C  +G +  G+
Sbjct: 105 RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGR 161

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP---ERDLVSWNTIVAGFA 215
            IH Q+    F  +      +++MY+KCG + +A + FDR+P   +RD+V+WN +++ F 
Sbjct: 162 RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 221

Query: 216 QNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDS 272
           +NG A  AL L   M  +G    + +T VS+L +    G  SL   +A+HG  + AG + 
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281

Query: 273 IVNVSTALVDMYAKCGRVETARLVF----DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
              V TALVD Y K G ++ A  VF    D   S ++V+ ++MI+A  + G P+E++R+F
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSK 387
             M  +G +P+ VT++  L+AC+ L       FV  + ++ +    D  +  +L++ Y++
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 401

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
              + RA   F  +Q   +VSWNAM   Y Q+ R  EAL  F +M  + ++P   T ++ 
Sbjct: 402 SNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITA 461

Query: 448 IPALAEL---SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN- 503
           + A A     +     K I +L+  +  E +  V  A ++MYAKCG++  ARA+F+ ++ 
Sbjct: 462 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 521

Query: 504 -ERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEG 561
             R   TWN M+  YG HGLGK A ELF  M  E   KPN +TF+  + A +    + +G
Sbjct: 522 ARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 581

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
                 +  + G E       A++++  + G L++A     K
Sbjct: 582 REIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDK 622


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/717 (37%), Positives = 413/717 (57%), Gaps = 8/717 (1%)

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           PD    L++ M++G+A       A++    M  D   P  + +  ++K C  +G +  G+
Sbjct: 70  PDAF--LHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGR 127

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
             HG +I  G   D++    +V  YAK G +E+A ++FD MP RD+V+WN +V G+  NG
Sbjct: 128 AAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNG 187

Query: 219 FAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              LAL     MH+    + D + I++ L A     S   GK +HGY +R G +  + V 
Sbjct: 188 LGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVG 247

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+DMY KCG V  AR VF  M  R VV+WN MI  Y     P+EA   F +M  +G++
Sbjct: 248 TSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
              VT +  L ACA       G  VH  + + +    V +  +L+ MY K  KV+ +  I
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F K+  KTLVSWN MI  Y       EA+  F ++ ++ + PD FTM +V+PA   L  +
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           R+ + IH+ +I   + +N  +M A++ MYA+ G V  +R +FD M  + V +WN MI GY
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG GK A+E+F++M     +PN+ TF+  ++ACS SGLV+EG  +F  + ++YG+ P 
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQ 547

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG M DLLGR G L E   FI+ MPI+P   V+G++L A +   ++++ E AA R+F
Sbjct: 548 IEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIF 607

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           +L+ D  G +++L+++YA A  W+ + +VR +M++KGL++T   SLVEL +   SF +G 
Sbjct: 608 QLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGD 667

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLL-SSHSEKLAIAFGLL 755
             H QS+ I+   + L  +IK      DT N  + V    +   + + HS +LA+ FGL+
Sbjct: 668 MSHSQSRTIHEVSDILSRKIKETD---DTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLI 724

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +S  GS I ++KN+R+C  CH+A K IS  +GR I+V D   +H F +G C CGDYW
Sbjct: 725 SSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 226/422 (53%), Gaps = 20/422 (4%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E R    ++IK GL         LV+ + K   + DA RVF+ +P +    ++ M+ G
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDG 182

Query: 113 Y----------AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           Y          A F  + DA    + +++D V  +      L   C +   + +GKEIHG
Sbjct: 183 YVSNGLGSLALACFQEMHDA----LEVQHDSVGII----AALAACCLEFSSM-QGKEIHG 233

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I +G   D+   T +++MY KCG++  A  +F  MP R +V+WN ++ G+A N   + 
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A D   +M  EG + + +T +++L A A   S   G++VHGY +R  F   V + TAL++
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY K G+VE++  +F  + ++ +VSWN+MIAAY+      EA+ +F ++L+Q + P   T
Sbjct: 354 MYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFT 413

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   + A   LG L     +H  +  L    +  + N+++ MY++   V  + +IF K+ 
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMV 473

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SWN MI+GYA +G+   AL  F +M+   ++P+  T VSV+ A + +S +    W
Sbjct: 474 SKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS-VSGLVDEGW 532

Query: 463 IH 464
           +H
Sbjct: 533 MH 534



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 198/374 (52%), Gaps = 2/374 (0%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           VV++ A+ G+++EA +    +   D    N ++ GFA  G    AL     M E+G R D
Sbjct: 48  VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T   ++   A +G L  G+A HG  ++ G +  V    +LV  YAK G VE A  VFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLE 357
           GM  R++V+WN M+  YV  G    A+  FQ+M D   V+  +V I+ AL AC       
Sbjct: 167 GMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSM 226

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
           +G  +H  + +  L  D+ +  SL+ MY KC +V  A  +F+ +  +T+V+WN MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            N R +EA + F +MR++ ++ +  T ++++ A A+     Y + +H  V+R  F  +V 
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           + TAL++MY K G V ++  +F  +  + + +WN MI  Y    +   A+ LF ++L  P
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406

Query: 538 TKPNDITFLCAISA 551
             P+  T    + A
Sbjct: 407 LYPDYFTMSTVVPA 420



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 154/306 (50%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I+ GL       T L+ ++CK   ++ A  VF  +P +    ++ M+ GYA     D+A
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEA 294

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
               ++MR + +   V     LL  C        G+ +HG ++   F   +   T ++ M
Sbjct: 295 FDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEM 354

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y K G++E + K+F ++  + LVSWN ++A +        A+ L   +  +    D+ T+
Sbjct: 355 YGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTM 414

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            +++PA   +GSLR  + +H Y +  G+     +  A++ MYA+ G V  +R +FD M S
Sbjct: 415 STVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVS 474

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++V+SWN+MI  Y   G  + A+ +F +M   G++P   T +  L AC+  G ++ G   
Sbjct: 475 KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMH 534

Query: 363 HKLLDQ 368
             L+ Q
Sbjct: 535 FNLMLQ 540



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 168/332 (50%), Gaps = 8/332 (2%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           S +LV   A  GR++ A      ++  +    N MI  + + G P  A+  ++ ML+ G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P   T    +  CA LG L+ G   H ++ +L L  DV   NSL++ Y+K   V+ A  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALA-EL 454
           +F  +  + +V+WN M+ GY  NG  + AL  F +M     ++ DS  +++ + A   E 
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           S ++  K IH  VIR   E+++ V T+L+DMY KCG V  AR++F  M  R V TWN MI
Sbjct: 224 SSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTSLKKDY 572
            GY  +     A + F +M     +   +T +  ++AC+   S L    +H +  +++ +
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV-VRRQF 341

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
               V++   A++++ G+ G++  +     K+
Sbjct: 342 LPHVVLE--TALLEMYGKVGKVESSEKIFGKI 371



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 7/245 (2%)

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           + SL+   +   ++D A +  + ++G      N MI G+A  G    AL  +  M     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +PD FT   V+   A L  +   +  H +VI+   E +V+   +L+  YAK G V  A  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND-ITFLCAISAC--SH 554
           +FD M  R + TWN+M+DGY ++GLG  A+  F +M +     +D +  + A++AC    
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           S +  + IH +      +G+E  +    +++D+  + G +  A      MP+   +T + 
Sbjct: 224 SSMQGKEIHGYV---IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVT-WN 279

Query: 615 AMLGA 619
            M+G 
Sbjct: 280 CMIGG 284


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/717 (37%), Positives = 413/717 (57%), Gaps = 8/717 (1%)

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           PD    L++ M++G+A       A++    M  D   P  + +  ++K C  +G +  G+
Sbjct: 70  PDAF--LHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGR 127

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
             HG +I  G   D++    +V  YAK G +E+A ++FD MP RD+V+WNT+V G+  NG
Sbjct: 128 AAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNG 187

Query: 219 FAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              LAL     MH+    + D + I++ L A     S   GK +HGY +R G +  + V 
Sbjct: 188 LGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVG 247

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+DMY KCG V  AR VF  M  R VV+WN MI  Y     P+EA   F +M  +G++
Sbjct: 248 TSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
              VT +  L ACA       G  VH  + + +    V +  +L+ MY K  KV+ +  I
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F K+  KTLVSWN MI  Y       EA+  F ++ ++ + PD FTM +V+PA   L  +
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           R+ + IH+ +I   + +N  +M A++ MYA+ G V  +R +FD M  + V +WN MI GY
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG GK A+E+F++M     +PN+ TF+  ++ACS SGLV+EG  +F  + ++YG+ P 
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQ 547

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG M DLLGR G L E   FI+ MPI+P   V+G++L A +   ++++ E AA R+F
Sbjct: 548 IEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIF 607

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           +L+ D  G +++L+++YA A  W+ + +VR +M++KGL++T   SLVEL +   SF +G 
Sbjct: 608 QLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGD 667

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLL-SSHSEKLAIAFGLL 755
             H QS+ I+     L  +I+      DT N  + V    +   + + HS +LA+ FGL+
Sbjct: 668 MSHSQSRTIHEVSNILSRKIEETD---DTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLI 724

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +S  GS I ++KN+R+C  CH+A K IS  +GR I+V D   +H F +G C CGDYW
Sbjct: 725 SSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 228/422 (54%), Gaps = 20/422 (4%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E R    ++IK GL         LV+ + K   + DA RVF+ +P +    ++TM+ G
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDG 182

Query: 113 Y----------AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           Y          A F  + DA    + +++D V  +      L   C +V  + +GKEIHG
Sbjct: 183 YVSNGLGSLALACFQEMHDA----LEVQHDSVGII----AALAACCLEVSSM-QGKEIHG 233

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I +G   D+   T +++MY KCG++  A  +F  MP R +V+WN ++ G+A N   + 
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A D   +M  EG + + +T +++L A A   S   G++VHGY +R  F   V + TAL++
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY K G+VE++  +F  + ++ +VSWN+MIAAY+      EA+ +F ++L+Q + P   T
Sbjct: 354 MYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFT 413

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   + A   LG L     +H  +  L    +  + N+++ MY++   V  + +IF K+ 
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMV 473

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SWN MI+GYA +G+   AL  F +M+   ++P+  T VSV+ A + +S +    W
Sbjct: 474 SKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS-VSGLVDEGW 532

Query: 463 IH 464
           +H
Sbjct: 533 MH 534



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 199/374 (53%), Gaps = 2/374 (0%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           VV++ A+ G+++EA +    +   D    N ++ GFA  G    AL     M E+G R D
Sbjct: 48  VVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T   ++   A +G L  G+A HG  ++ G +  V    +LV  YAK G VE A  VFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLE 357
           GM  R++V+WN+M+  YV  G    A+  FQ+M D   V+  +V I+ AL AC       
Sbjct: 167 GMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSM 226

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
           +G  +H  + +  L  D+ +  SL+ MY KC +V  A  +F+ +  +T+V+WN MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            N R +EA + F +MR++ ++ +  T ++++ A A+     Y + +H  V+R  F  +V 
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           + TAL++MY K G V ++  +F  +  + + +WN MI  Y    +   A+ LF ++L  P
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406

Query: 538 TKPNDITFLCAISA 551
             P+  T    + A
Sbjct: 407 LYPDYFTMSTVVPA 420



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 163/326 (50%), Gaps = 2/326 (0%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +A  LEV  S  + + I   +I+ GL       T L+ ++CK   ++ A  VF  +P + 
Sbjct: 217 AACCLEV--SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ M+ GYA     D+A    ++MR + +   V     LL  C        G+ +HG
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHG 334

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++   F   +   T ++ MY K G++E + K+F ++  + LVSWN ++A +        
Sbjct: 335 YVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTE 394

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L   +  +    D+ T+ +++PA   +GSLR  + +H Y +  G+     +  A++ 
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYA+ G V  +R +FD M S++V+SWN+MI  Y   G  + A+ +F +M   G++P   T
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 343 IMEALHACADLGDLERGIFVHKLLDQ 368
            +  L AC+  G ++ G     L+ Q
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQ 540



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 8/332 (2%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           S +LV   A  GR++ A      ++  +    N MI  + + G P  A+  ++ ML+ G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P   T    +  CA LG L+ G   H ++ +L L  DV   NSL++ Y+K   V+ A  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALA-EL 454
           +F  +  + +V+WN M+ GY  NG  + AL  F +M     ++ DS  +++ + A   E+
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           S ++  K IH  VIR   E+++ V T+L+DMY KCG V  AR++F  M  R V TWN MI
Sbjct: 224 SSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMI 282

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTSLKKDY 572
            GY  +     A + F +M     +   +T +  ++AC+   S L    +H +  +++ +
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYV-VRRQF 341

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
               V++   A++++ G+ G++  +     K+
Sbjct: 342 LPHVVLE--TALLEMYGKVGKVESSEKIFGKI 371



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           + SL+   +   ++D A +  + ++G      N MI G+A  G    AL  +  M     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +PD FT   V+   A L  +   +  H +VI+   E +V+   +L+  YAK G V  A  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND-ITFLCAISAC--SH 554
           +FD M  R + TWN M+DGY ++GLG  A+  F +M +     +D +  + A++AC    
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           S +  + IH +      +G+E  +    +++D+  + G +  A      MP+   +T + 
Sbjct: 224 SSMQGKEIHGYV---IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVT-WN 279

Query: 615 AMLGA 619
            M+G 
Sbjct: 280 CMIGG 284


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/774 (36%), Positives = 446/774 (57%), Gaps = 26/774 (3%)

Query: 56   LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAK 115
            L ++L  + KSG        + LVS F K  S+  A  +F+ +  +     + ++ G  +
Sbjct: 303  LEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR 362

Query: 116  FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI----RRGKEIHGQLIVNGFSL 171
                ++AV   + M+ D V     +Y  +L    +   +    R+G E+H  LI +G   
Sbjct: 363  QKRGEEAVELFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLN 421

Query: 172  DLFAM-TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG-FAELALDLVTR 229
               A+  G++NMYAKCG I +A  +F  M  +D V+WN+++ G  QN  F E       +
Sbjct: 422  AQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLE-----AVK 476

Query: 230  MHEEGRRGDF----ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
              +E RR +      T++S L + A++G + +G+ +H   ++ G D  V+VS AL+ +Y 
Sbjct: 477  TFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYG 536

Query: 286  KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE--EAMRIFQKMLDQGVEPTNVTI 343
            +CG V+  +  F  M   + VSWNS+I A  +   P   EA+  F  M+  G +P  VT 
Sbjct: 537  ECGYVKECQKAFSLMLDYDHVSWNSLIGALADS-EPSMLEAVESFLVMMRAGWDPNRVTF 595

Query: 344  MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
            +  L A + L   E G  +H L+ +  +  D ++ N+L++ Y KC  +    +IFS++  
Sbjct: 596  ITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSD 655

Query: 404  KT-LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            +   VSWN+MI GY  N  + +A++    M  K  + D FT  +V+ A A ++ +     
Sbjct: 656  RQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGME 715

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +H   +R+C E ++ + +AL+DMYAKCG +  A   F+MM  R++ +WN MI GY  HG 
Sbjct: 716  VHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGH 775

Query: 523  GKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  +++LF +M L+GP  P+ +TF+  +SACSH+GLV EG  +F S+ + YG+ P M+H+
Sbjct: 776  GTKSLDLFAQMKLQGPL-PDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHF 834

Query: 582  GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNVELGEKAANRLFEL 639
              MVDLLGR G LN+  DF+ +MP++P + ++  +LGAC     +N  LG +AA  L E+
Sbjct: 835  SCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEM 894

Query: 640  DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
            +P     ++LL+N+YA+   WD +AK R  M K  ++K  GCS V +K+ VH F +G   
Sbjct: 895  EPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKS 954

Query: 700  HPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
            HP+   IY  L+ L  +++ AGY+P+T  +++D+E   +E LLS HSEK+A+AF L   S
Sbjct: 955  HPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVLTRPS 1014

Query: 759  PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
                I I KNLRVCGDCH+A KYIS +  R+I++RD +RFH F+NG CSCGD+W
Sbjct: 1015 K-MPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 231/458 (50%), Gaps = 20/458 (4%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           +  +E+H QL  NGF  DLF    ++N+YA+ G +    K+FD MP R+LVSW+ +++G+
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDS 272
            +N     A +L  +M  +G   +     S++ A    G   L+ G  +HG   +  + +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 273 IVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
            V  S  L+ MY    G V+ AR  FD +  RN+VS NSMI+ Y + G+   A  IF  M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269

Query: 332 ----LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT---DVSMTNSLISM 384
               +  G++P   T    + A   L +    + + +LL +++      D+ + ++L+S 
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLAN-SGLVLLEQLLTRVEKSGFLHDLYVGSALVSG 328

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFT 443
           ++K   +  A +IF K+  + +VS N +I+G  +  R  EA+  F +M+ S  + P+S+ 
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM 388

Query: 444 MVSVIPALAELSVI----RYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARAL 498
           +  ++ A  E  V+    R    +HA +IRS      + +   LI+MYAKCGA+  A  +
Sbjct: 389 I--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVV 446

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F +M+ +   TWN MI G   +     AV+ F +M      P++ T + A+S+C+  G +
Sbjct: 447 FRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWI 506

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             G        K  G++  +    A++ L G  G + E
Sbjct: 507 SVGEQLHCEGLK-LGLDLDVSVSNALLALYGECGYVKE 543



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 275/561 (49%), Gaps = 25/561 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           + K+G  +       L++++ +   L    +VF+ +P +    +  ++ GY +    ++A
Sbjct: 99  LFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEA 158

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVV 180
                +M  D   P  Y +  +++ C + GE  ++ G +IHG +    +  D+ A   ++
Sbjct: 159 CELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLI 218

Query: 181 NMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD- 238
           +MY    G ++ A + FD +  R+LVS N++++ + Q G A  A D+ + M +E   GD 
Sbjct: 219 SMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE-VMGDG 277

Query: 239 -------FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
                  F +++S   ++AN G L + + +     ++GF   + V +ALV  +AK G + 
Sbjct: 278 LKPNEYTFGSLISATCSLANSG-LVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIG 336

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A+ +F  M  RNVVS N +I   V     EEA+ +F +M D  VE    + M  L A  
Sbjct: 337 YAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYMIILTAFP 395

Query: 352 DLGDLE----RGIFVHKLLDQLK-LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           +   LE    +G  VH  L +   L   +++ N LI+MY+KC  ++ A  +F  +  K  
Sbjct: 396 EFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDS 455

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           V+WN+MI G  QN +  EA+  F +MR   + P +FTM+S + + A L  I   + +H  
Sbjct: 456 VTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCE 515

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG-THGLGKA 525
            ++   + +V V  AL+ +Y +CG V   +  F +M +    +WN +I     +      
Sbjct: 516 GLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLE 575

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA 583
           AVE F  M+     PN +TF+  ++A S   L E G  IH    LK++   +  +++  A
Sbjct: 576 AVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALV-LKRNVAADTAIEN--A 632

Query: 584 MVDLLGRAGRLNEAWDFIQKM 604
           ++   G+ G +    +   +M
Sbjct: 633 LLACYGKCGDMGYCENIFSRM 653


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/737 (35%), Positives = 435/737 (59%), Gaps = 3/737 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV ++ +   LS A +VF+ +P +    +++++ GY+     ++A+     +R   + P 
Sbjct: 147 LVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPD 206

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L    ++  +++G+ +HG  + +G +       G++ MY K  +  +A ++FD
Sbjct: 207 SFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFD 266

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  RD V++NT++ G+ +    E ++ +     ++ +  D +T+ S+L A  ++  L +
Sbjct: 267 EMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK-PDILTVTSVLCACGHLRDLSL 325

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K ++ Y +RAGF     V   L+D+YAKCG + TAR VF+ M+ ++ VSWNS+I+ Y++
Sbjct: 326 AKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G+  EAM++F+ M+    +  ++T +  +     L DL+ G  +H    +  +  D+S+
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSV 445

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +N+LI MY+KC +V  +  IF+ +     V+WN +I    + G     L    +MR   +
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKV 505

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            PD  T +  +P  A L+  R  K IH  ++R  +E  + +  ALI+MY+KCG + ++  
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFR 565

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+ M+ R V TW  MI  YG +G G+ A+E F  M +    P+ + F+  I ACSHSGL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGL 625

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VE+G+  F  +K  Y I+P+++HY  +VDLL R+ ++++A +FIQ MPIEP  +++ ++L
Sbjct: 626 VEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVL 685

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC+   ++E  E+ + R+ EL+PD+ GY +L +N YAA   WDK++ +R  +  K ++K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKK 745

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHD--VEDY 735
            PG S +E+  +VH F SG    PQS+ I+  LE L   +   GY+PD+  +     E+ 
Sbjct: 746 NPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEE 805

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +  L+  HSE+LAIAFGLLN+ PG+ + + KNLRVC DCH  TK IS + GREI+VRD 
Sbjct: 806 EKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDA 865

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH FK+G+CSC D W
Sbjct: 866 NRFHLFKDGICSCKDRW 882



 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 179/617 (29%), Positives = 324/617 (52%), Gaps = 15/617 (2%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI-PDKLDAL 105
           L   ++L ELRRI  L+I  GL     F  KL+  +  + + + +  VF  + P K   +
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYI 73

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++++++ ++K      A+ F  ++R   V+P  Y +  ++K C  + +   G  ++ Q++
Sbjct: 74  WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             GF  DL+    +V+MY++ G +  A ++FD MP RDLVSWN++++G++ +G+ E AL+
Sbjct: 134 EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   +       D  T+ S+LPA AN+  ++ G+ +HG+ +++G +S+  V+  L+ MY 
Sbjct: 194 IYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYL 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           K  R   AR VFD M  R+ V++N+MI  Y++    EE++++F + LDQ  +P  +T+  
Sbjct: 254 KFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTS 312

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L AC  L DL    +++  + +     + ++ N LI +Y+KC  +  A D+F+ ++ K 
Sbjct: 313 VLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKD 372

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            VSWN++I GY Q+G + EA+  F  M     + D  T + +I     L+ +++ K +H+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHS 432

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             I+S    ++ V  ALIDMYAKCG VG +  +F+ M      TWN +I      G    
Sbjct: 433 NGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFAT 492

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
            +++  +M +    P+  TFL  +  C+       G      L + +G E  +    A++
Sbjct: 493 GLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALI 551

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD----- 640
           ++  + G L  ++   ++M     +T  G M+ A  ++     GEKA     +++     
Sbjct: 552 EMYSKCGCLESSFRVFERMSRRDVVTWTG-MIYAYGMYGE---GEKALESFVDMEKSGIV 607

Query: 641 PDEGGYHVLLANIYAAA 657
           PD     V +A IYA +
Sbjct: 608 PDS---VVFIALIYACS 621



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVT 508
           AL+  S +   + IHALVI    + + F    LID Y+   A  ++ ++F  ++  ++V 
Sbjct: 13  ALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVY 72

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN +I  +  +G    A+E + K+ E    P+  TF   I AC+     E G   +  +
Sbjct: 73  IWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + G E  +    A+VD+  R G L+ A     +MP+
Sbjct: 133 -LEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPV 169


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/673 (39%), Positives = 396/673 (58%), Gaps = 4/673 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           LLK+  D   ++ GK IH  LIV   + +  +  +  ++N YAK  Q+  A+ +FDRMPE
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI-LPAVANVGSLRIGKA 260
           R++VSW+ ++ G+  NGF+   + L+  M  EG       I++I + +  + G +  G+ 
Sbjct: 95  RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
            HG  ++ GF     V  ALV MY+KC  V+ A  V++ +   ++V++NS++++ VE G 
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             E + + + M+ + V+   VT + A   CA L DL  G+ VH  +    +  D  ++++
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +I+MY KC K   A  +F  LQ + +V W A++    QNG   EALN F KM  +N+K +
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            FT   ++ A A LS  R    +H    +S F+ +V V  ALI+MYAK G +  A+ +F 
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R + TWN MI G+  HGLGK A+ +F  ML     PN +TF   +SAC H GLV+E
Sbjct: 395 DMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G +Y   L K +G++P ++HY  +V LL + G+LNEA +F++  P++  +  +  +L AC
Sbjct: 455 GFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            +H+N  LG   A  + E+DP++ G + LL+NIYA    WD + KVR +M  K ++K PG
Sbjct: 515 HVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPG 574

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E+ N  H F S   KHP   + Y  ++ L+  IK  GY PD  ++ HDVED  +E 
Sbjct: 575 VSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEY 634

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            LS HSEKLAIA+GLL     ++I + KNLR+C DCH+A + IS VT R I+VRD +RFH
Sbjct: 635 YLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFH 694

Query: 800 CFKNGVCSCGDYW 812
            F++G CSC DYW
Sbjct: 695 HFRDGRCSCLDYW 707



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 253/493 (51%), Gaps = 20/493 (4%)

Query: 62  LIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
           LI+ S   +  + +   L++ + K N +S A  +F+ +P++    +  ++ GY     L+
Sbjct: 55  LIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYL----LN 110

Query: 121 DAVSFLIRMRYD-----DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
                +IR+  D     +V+P  Y     +  C D G +  G++ HG L+  GFS   + 
Sbjct: 111 GFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYV 170

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
              +V+MY+KC  +++A  +++ +P  D+V++N+I++   +NG+    L+++  M  E  
Sbjct: 171 RNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESV 230

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           + D +T V+     A++  LR+G  VHG  + +  +    VS+A+++MY KCG+   AR 
Sbjct: 231 KWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARG 290

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VFDG++SRNVV W +++A+  + G  EEA+ +F KM  + V+    T    L+ACA L  
Sbjct: 291 VFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSA 350

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
              G  +H   ++      V + N+LI+MY+K   ++ A  +FS +  + +++WNAMI G
Sbjct: 351 RRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICG 410

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEK 474
           ++ +G   +AL  F  M +    P+  T   V+ A   L +++    ++H L+ +   + 
Sbjct: 411 FSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQP 470

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH---GLGKAAVELF 530
            +   T ++ + +K G +  AR        +  V  W  +++    H   GLG+   E  
Sbjct: 471 GLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFV 530

Query: 531 NKMLEGPTKPNDI 543
            +M      PND+
Sbjct: 531 LEM-----DPNDV 538



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 189/363 (52%), Gaps = 2/363 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           ++E R+   L++K+G    +  +  LVS++ K + + DA  V+  +P      Y+++L  
Sbjct: 149 VEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSS 208

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
             +   L + +  L  M  + V      +     +C  + ++R G  +HG+++ +    D
Sbjct: 209 LVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECD 268

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
            +  + ++NMY KCG+   A  +FD +  R++V W  ++A   QNG  E AL+L ++M +
Sbjct: 269 AYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQ 328

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           E  + +  T   +L A A + + R G  +HG++ ++GF   V V  AL++MYAK G +E 
Sbjct: 329 ENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEA 388

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+ VF  M  R++++WN+MI  +   G  ++A+ +FQ ML     P  VT    L AC  
Sbjct: 389 AKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGH 448

Query: 353 LGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWN 410
           LG ++ G  ++H L+ Q  +   +     ++S+ SK  +++ A +       K  +V+W 
Sbjct: 449 LGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWR 508

Query: 411 AMI 413
            ++
Sbjct: 509 TLL 511



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 205/401 (51%), Gaps = 18/401 (4%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAM---RAGFDSIVNVSTALVDMYAKCGRVETARLV 296
           + ++ +L   A+  +L++GK +H + +   RA  +SI+ V++ L++ YAK  +V  A  +
Sbjct: 30  LDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNS-LINFYAKVNQVSIAHNL 88

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGD 355
           FD M  RNVVSW++++  Y+  G   + +R+ + M+ +G V P    +  A+ +C D G 
Sbjct: 89  FDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGR 148

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +E G   H LL +        + N+L+SMYSKC  V  A  +++++    +V++N+++  
Sbjct: 149 VEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSS 208

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
             +NG + E L     M S+++K D  T V+     A L  +R    +H  ++ S  E +
Sbjct: 209 LVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECD 268

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            +V +A+I+MY KCG    AR +FD +  R+V  W  ++     +G  + A+ LF+KM +
Sbjct: 269 AYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQ 328

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY----GAMVDLLGRA 591
              K N+ T+   ++AC+       G     SL   +  +    H+     A++++  ++
Sbjct: 329 ENVKSNEFTYAVLLNACAGLSARRNG-----SLLHGHSEKSGFKHHVMVGNALINMYAKS 383

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G +  A      M +   I  + AM+     H    LG+KA
Sbjct: 384 GDIEAAKKVFSDM-MHRDIITWNAMICGFSHHG---LGKKA 420


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/581 (43%), Positives = 370/581 (63%), Gaps = 6/581 (1%)

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G + D  T   I+ A + +     G  +H   ++ G+ S V +S +L+ MY KC + E +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R VFD M  +N VSW+++I A ++    +E   +F++ML +G  P+   I+ A+ AC  +
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-AC--V 121

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              E    V++++ +  L  D S+ ++   M+++C +V+ A  +F  +  K LV+W   I
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTI 181

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
             Y +     EAL    +M  + I PD+ T++ VI A + L+  + A  +H ++    F 
Sbjct: 182 EAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFY 241

Query: 474 KNVF-VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             +  V TALID+Y KCG++  AR +FD M ER++ TW+ MI GYG HG G+ A+ LF++
Sbjct: 242 NQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQ 301

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M +   KP+ ITF+  +SACSHSGLV EG   F S+ +D+G+ P  +HY  MVD+LGRAG
Sbjct: 302 M-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAG 360

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           +L+EA DFI++MP+ P   V+GA+LGAC+IH NV+L E  A  LF+LDP   G +V+L N
Sbjct: 361 KLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYN 420

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           IY       +   +RT+M+ +G++K  G S++E+KN++++F +G   HPQ+  IY+ LE 
Sbjct: 421 IYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELER 480

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L+D I+  GY PD N + HDV++  +E++L  HSEKLAI FGLLN  PGS I IRKNLRV
Sbjct: 481 LMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRV 540

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCH ATK+IS VTGREI+VRD HRFH FKNG CSC DYW
Sbjct: 541 CGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 181/330 (54%), Gaps = 15/330 (4%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           + P  + + +++K C  +     G  IH  ++  G+   +F    ++ MY KC + E + 
Sbjct: 6   IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD MP+++ VSW+ I+    Q+   +    L  +M  EG R    +  +IL A+A V 
Sbjct: 66  QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMACVR 122

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           S      V+   +  G D   +V +A   M+A+CGRVE AR +FDG+ S+++V+W + I 
Sbjct: 123 SHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIE 182

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL------D 367
           AYV+   P EA+ + ++M+ QG+ P  +T++  + AC+ L   +    VH ++      +
Sbjct: 183 AYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYN 242

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           QL     +++  +LI +Y KC  +  A  +F  +Q + +++W+AMI GY  +G   EALN
Sbjct: 243 QL-----LAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
            F +M++ ++KPD  T VS++ A +   ++
Sbjct: 298 LFDQMKA-SVKPDHITFVSILSACSHSGLV 326



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 180/375 (48%), Gaps = 10/375 (2%)

Query: 45  LLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
            +++ C+ L+      RI   ++K G   Q      L++++ K +    + +VF+ +PDK
Sbjct: 15  FIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDK 74

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  ++    +     +  S   +M  +   P   +   +L     V       +++
Sbjct: 75  NAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMACVRSHEEADDVY 131

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             ++ NG   D    +    M+A+CG++E A K+FD +  +DLV+W T +  + +     
Sbjct: 132 RVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPL 191

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVSTAL 280
            AL L+ +M  +G   D IT++ ++ A + + S ++   VHG      F + ++ V TAL
Sbjct: 192 EALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETAL 251

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +D+Y KCG +  AR VFDGM+ RN+++W++MI+ Y   G   EA+ +F +M    V+P +
Sbjct: 252 IDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDH 310

Query: 341 VTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +T +  L AC+  G +  G    + +     +         ++ +  +  K+D A D   
Sbjct: 311 ITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIE 370

Query: 400 KLQGKTLVS-WNAMI 413
           ++  +   + W A++
Sbjct: 371 RMPVRPNAAVWGALL 385



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 155/338 (45%), Gaps = 27/338 (7%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML  G++P N T    + AC+ L   E GI +H+ + +    + V ++NSLI+MY KC K
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
            + +  +F ++  K  VSW+A+I    Q+ R  E  + F +M S+  +P   +  +++ A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNA 117

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
           +A +     A  ++ +V+ +  + +  V +A   M+A+CG V  AR LFD +  + + TW
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH----------SGLVEE 560
              I+ Y    +   A+ L  +M+     P+ IT L  I ACS            G++  
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  Y   L  +           A++DL  + G L  A      M  E  I  + AM+   
Sbjct: 238 GFFYNQLLAVE----------TALIDLYVKCGSLTYARKVFDGMQ-ERNIITWSAMISGY 286

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            +H     G +A N   ++       H+   +I +A S
Sbjct: 287 GMHG---WGREALNLFDQMKASVKPDHITFVSILSACS 321


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/649 (41%), Positives = 395/649 (60%), Gaps = 10/649 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   ++  YAK  +   A+++FD++PE DLVS+NT+++ +A  G    AL L + M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E G   D  T+ +++ A  +   L IG+ +H  A+ +GFDS V+V+ AL+  Y K G ++
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A+ VF GM   R+ VSWNSMI AY +     +A+ +FQ+M+ +G+     T+   L A 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSKLQGKTLVSW 409
             L DL  G+  H  L +     +  + + LI +YSKC   +     +F ++    LV W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 410 NAMILGYAQNGR-VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           N M+ GY+QN   + +AL  F +M+    +P+  + V VI A + LS     K IH+L +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 469 RSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +S    N + V  ALI MY+KCG +  AR LFD M E +  + N MI GY  HG+   ++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF  MLE    P  ITF+  +SAC+H+G VEEG +YF  +K+ + IEP  +HY  M+DL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG+L+EA + I +MP  PG   + ++LGAC+ H N+EL  KAAN++ +L+P     +
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           V+L+N+YA+A  W+++A VR  M  +G++K PGCS +E+K  +H F +  + HP  K IY
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610

Query: 708 TFLETLIDEIKAAGYVPDTNSIHDVEDYV----QENLLSSHSEKLAIAFGLLNSSPGSTI 763
            FLE +  ++K AGYVPD       +D      +E  L  HSEKLA+AFGL+++  G  +
Sbjct: 611 EFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPV 670

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + KNLR+CGDCHNA K+IS + GREI VRD HRFHCFK G CSCGDYW
Sbjct: 671 LVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 249/520 (47%), Gaps = 19/520 (3%)

Query: 26  HTLSQRAYIPSRIYRHPSALLL-EVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFC 83
           H+L  +++IP   Y     +LL   C  L   R+         + D ++F    +++ + 
Sbjct: 31  HSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAF-----QDISDPNVFSFNAIIAAYA 85

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K +    A ++F+ IP+     Y+T++  YA       A+     MR   +    +  + 
Sbjct: 86  KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSA 145

Query: 144 LLKV-CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE- 201
           ++   C DVG I    ++H   + +GF   +     ++  Y K G +++A ++F  M   
Sbjct: 146 VITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGI 202

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           RD VSWN+++  + Q+     AL L   M   G   D  T+ S+L A   +  L  G   
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           HG  ++ GF    +V + L+D+Y+KC G +   R VF+ +   ++V WN+M++ Y +   
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEE 322

Query: 321 -PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMT 378
             E+A+  F++M   G  P + + +  + AC++L    +G  +H L  +  + ++ +S+ 
Sbjct: 323 FLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD 382

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+LI+MYSKC  +  A  +F ++     VS N+MI GYAQ+G   E+L+ F  M  + I 
Sbjct: 383 NALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIA 442

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTAR 496
           P S T +SV+ A A    +    W +  +++  F  E      + +ID+  + G +  A 
Sbjct: 443 PTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            L   M        W  ++    THG  + AV+  N++L+
Sbjct: 502 NLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 207/406 (50%), Gaps = 9/406 (2%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           SA++   C  +  + ++  + + SG          L++ + K   L DA RVF  +    
Sbjct: 144 SAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + +++M+  Y +      A+     M    +   ++    +L     + ++  G + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GF 219
           GQLI  GF  +    +G++++Y+KC G + +  K+F+ + E DLV WNT+V+G++QN  F
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEF 323

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNVST 278
            E AL+   +M   G R +  + V ++ A +N+ S   GK +H  A+++   S  ++V  
Sbjct: 324 LEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN 383

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+ MY+KCG ++ AR +FD M   N VS NSMIA Y + G   E++ +FQ ML++ + P
Sbjct: 384 ALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAP 443

Query: 339 TNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           T++T +  L ACA  G +E G  + + + ++  +  +    + +I +  +  K+  A ++
Sbjct: 444 TSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENL 503

Query: 398 FSKLQ-GKTLVSWNAMILGYAQNGRVN---EALNYFCKMRSKNIKP 439
            +++      + W +++     +G +    +A N   ++   N  P
Sbjct: 504 IARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 46/389 (11%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  GK++H   +++        S   + +Y+KCGR+  AR  F  +   NV S+N++IAA
Sbjct: 24  LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y +   P  A ++F    DQ  EP  V+    + A AD G+    + +   + ++ L  D
Sbjct: 84  YAKESRPLIAHQLF----DQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139

Query: 375 ---------------------------------VSMTNSLISMYSKCKKVDRAADIFSKL 401
                                            VS+ N+L++ Y K   +D A  +F  +
Sbjct: 140 GFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199

Query: 402 QG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            G +  VSWN+MI+ Y Q+   ++AL  F +M  + +  D FT+ SV+ A   L  +   
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              H  +I++ F +N  V + LID+Y+KC G +   R +F+ + E  +  WN M+ GY  
Sbjct: 260 LQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQ 319

Query: 520 H-GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEP 576
           +    + A+E F +M     +PND +F+C ISACS+     +G  IH   +LK D     
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL-ALKSDIPSNR 378

Query: 577 V-MDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           + +D+  A++ +  + G L +A     +M
Sbjct: 379 ISVDN--ALIAMYSKCGNLQDARRLFDRM 405



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 101/260 (38%), Gaps = 45/260 (17%)

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA----------- 395
           L  C    DL  G  +H L  +  +      +N  I +YSKC ++  A            
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74

Query: 396 --------------------DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
                                +F ++    LVS+N +I  YA  G    AL  F  MR  
Sbjct: 75  FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            +  D FT+ +VI A  +   +     +H++ + S F+  V V  AL+  Y K G +  A
Sbjct: 135 GLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192

Query: 496 -RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS- 553
            R  + M   R   +WN MI  YG H  G  A+ LF +M+      +  T    ++A + 
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252

Query: 554 ----------HSGLVEEGIH 563
                     H  L++ G H
Sbjct: 253 LEDLSGGLQFHGQLIKTGFH 272


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/771 (35%), Positives = 437/771 (56%), Gaps = 49/771 (6%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            +V+ +C    +S+A  +F+ +P++    +  M+ GY   +   +A    ++M      P 
Sbjct: 301  VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPD 360

Query: 138  VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               +  +L     + ++     +    I  G+  D+   + ++N Y + G ++ A   F+
Sbjct: 361  QSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFE 420

Query: 198  RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
             MPER+  SW T++A FAQ G  + A+ L  R+ E+       T  +++ A A VG  RI
Sbjct: 421  TMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ----TVATKTAMMTAYAQVG--RI 474

Query: 258  GKAVHGYAMRAGFDSIVNVS----TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             KA      R  FD I+N +     A++  Y + G ++ A+ +F  M  +N  SW +MIA
Sbjct: 475  QKA------RLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIA 528

Query: 314  AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
             +V+     EA+ +  ++   G  P++ +   AL ACA++GD+E G  +H L  +     
Sbjct: 529  GFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQF 588

Query: 374  DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG------------------ 415
            +  + N LISMY+KC  V+  + +F  ++ K  VSWN++I G                  
Sbjct: 589  NSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP 648

Query: 416  -------------YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
                         Y Q G    AL+ F  M ++ IKP+  T+ S++ A   L  I+  + 
Sbjct: 649  KRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ 708

Query: 463  IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
             HAL+ +  F+  +FV  +LI MY KCG       +F+ M E  + TWN ++ G   +GL
Sbjct: 709  FHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGL 767

Query: 523  GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            GK A+++F +M      P+ ++FL  + ACSH+GLV+EG  +F S+ + YGI P++ HY 
Sbjct: 768  GKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYT 827

Query: 583  AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
             MVDLLGRAG L+EA   I+ MP++P   ++ A+LGAC+IH+NVELG++ A RLF++   
Sbjct: 828  CMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKP 887

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
            +   +VLL+N++A+  MWDK+A++R +M+ +GL K PG S +++KN++H F +G   H Q
Sbjct: 888  KSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQ 947

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
             + IY+ L+      +A GY+PDTN + HDVE+  ++N L  HSEKLA+ FG+L++  GS
Sbjct: 948  IEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGS 1007

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLR+CGDCH   K++S VT R+II+RD +RFH F++G CSCGDYW
Sbjct: 1008 PIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 279/574 (48%), Gaps = 57/574 (9%)

Query: 45  LLLEVCTSLKELRRI---LPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           ++L   T L +L  I    P+ IK+G     +  + +++ + +  SL  A   FE +P++
Sbjct: 366 VVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER 425

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
            +  + TM+  +A+   LDDA+    R+    VA      T ++     VG I++ + I 
Sbjct: 426 NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIF 481

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            +++    + ++ A   ++  Y + G ++EA  +F +MP ++  SW  ++AGF QN  + 
Sbjct: 482 DEIL----NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESR 537

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL+L+  +H  G      +  S L A AN+G + IG+ +H  A++ G      V   L+
Sbjct: 538 EALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLI 597

Query: 282 DMYAKCGRVE-------------------------------TARLVFDGMKSRNVVSWNS 310
            MYAKCG VE                                AR+VF+ M  R+VVSW +
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTA 657

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I+AYV+ G+ E A+ +F  ML +G++P  +T+   L AC +LG ++ G   H L+ +L 
Sbjct: 658 IISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLG 717

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
             T + + NSLI+MY KC   D    +F ++    L++WNA+++G AQNG   EA+  F 
Sbjct: 718 FDTFLFVGNSLITMYFKCGYEDGFC-VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFE 776

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH--ALVIRSCFEKNVFVMTALIDMYAK 488
           +M  + I PD  + + V+ A +   ++    W H  ++  +      V+  T ++D+  +
Sbjct: 777 QMEVEGILPDQMSFLGVLCACSHAGLVDEG-WAHFNSMTQKYGIMPLVYHYTCMVDLLGR 835

Query: 489 CGAVGTARALFDMMNER-HVTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDIT 544
            G +  A AL + M  +     W  ++     H    LG+   E   +M    TKP   T
Sbjct: 836 AGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM----TKPKSAT 891

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGI--EP 576
           ++   +  +  G+ ++ +     L KD G+  EP
Sbjct: 892 YVLLSNLFASQGMWDK-VAEIRKLMKDQGLTKEP 924



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 293/633 (46%), Gaps = 80/633 (12%)

Query: 72  HLFQTKL-VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
           HLFQ    +    +   + +A RVF  +  +    +++M+ GY++   +D+A     R+ 
Sbjct: 170 HLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA-----RLL 224

Query: 131 YDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL----------IVNGF--------SL 171
           +D  V   +  +T LL      G I   +E+   +          +++G+        + 
Sbjct: 225 FDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNAR 284

Query: 172 DLF---------AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            LF         +   VV  Y  C ++ EA ++FD+MPER+ VSW  +++G+        
Sbjct: 285 KLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWE 344

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A D+  +M     R D    V +L A+  +  L +  ++   A++ G++  V V +A+++
Sbjct: 345 AWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILN 404

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y + G ++ A   F+ M  RN  SW +MIAA+ + G  ++A+++++++ +Q V  T   
Sbjct: 405 AYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV-ATKTA 463

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +M A    A +G +++   +    D++ L  +V   N++I+ Y++   +  A D+F K+ 
Sbjct: 464 MMTAY---AQVGRIQKARLI---FDEI-LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP 516

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K   SW AMI G+ QN    EAL    ++      P   +  S + A A +  +   + 
Sbjct: 517 VKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRV 576

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAV------------------------------ 492
           IH+L I++  + N +VM  LI MYAKCG V                              
Sbjct: 577 IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYM 636

Query: 493 -GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              AR +F+ M +R V +W  +I  Y   G G+ A++LF  ML    KPN +T    +SA
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           C + G ++ G   F +L    G +  +    +++ +  + G   + +   ++MP E  + 
Sbjct: 697 CGNLGAIKLG-EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLI 753

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
            + A+L  C  +    LG K A ++FE    EG
Sbjct: 754 TWNAVLVGCAQNG---LG-KEAIKIFEQMEVEG 782



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 26/257 (10%)

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           T +   N+ I    +  +V+ A  +F+++  + +VSWN+MI GY+QNG+V+EA   F   
Sbjct: 169 THLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF 228

Query: 433 RSKNIKPDSFTMV------------SVIPALAELSVIRYAKWIHALV-------IRSCF- 472
             KNI+  +  +              V  ++ E +V+ +   I   V        R  F 
Sbjct: 229 VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFD 288

Query: 473 ---EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
              EKNV    +++  Y  C  +  AR LFD M ER+  +W VMI GY        A ++
Sbjct: 289 EMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDV 348

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVE-EGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           F KM     +P+   F+  +SA   +GL + E I     +    G E  +    A+++  
Sbjct: 349 FVKMCRTVARPDQSIFVVVLSAI--TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAY 406

Query: 589 GRAGRLNEAWDFIQKMP 605
            R G L+ A  F + MP
Sbjct: 407 TRNGSLDLAMHFFETMP 423



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 29/219 (13%)

Query: 458 RYAKWIHAL-----VIR--------SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           R+A+W+  L     VIR           + ++F     I    + G V  AR +F+ M +
Sbjct: 140 RHARWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQ 199

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R V +WN MI+GY  +G    A  LF+  +      N  T+   ++  +  G +EE    
Sbjct: 200 RDVVSWNSMINGYSQNGKVDEARLLFDAFV----GKNIRTWTILLTGYAKEGRIEEAREV 255

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F S+      E  +  + AM+    + G L  A     +MP +   +    + G C  ++
Sbjct: 256 FESM-----TERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYR 310

Query: 625 NVELGEKAANRLFELDPDEG--GYHVLLANIYAAASMWD 661
             E     A  LF+  P+     + V+++     +  W+
Sbjct: 311 MSE-----ARELFDQMPERNSVSWMVMISGYVHISDYWE 344


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 252/664 (37%), Positives = 396/664 (59%), Gaps = 40/664 (6%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           +Y+    + ++ ++F+ +     ++W +++  +  +G    +L     M   G   D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK-------------CG 288
             S+L + A +  L +G+++HGY +R G D  +    AL++MY+K              G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 289 RV-------------------ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            V                   ++ R +F+ M  +++VSWN++IA     G  EE +R+ +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M    ++P + T+   L   A+  D+ RG  +H    +  L  D+ + +SLI MY+KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +V  +  +F+ L  +  +SWN++I G  QNG  +E L +F +M    IKP S++  S++P
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A L+ +   K +H  + R+ F++N+F+ ++L+DMYAKCG + TA+ +FD M  R + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           W  MI G   HG    A+ELF +M     K         ++ACSH GLV+E   YF S+ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMT 461

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           +D+GI P ++HY A+ DLLGRAGRL EA+DFI  M I P  +++  +L AC++HKN+++ 
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMA 521

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           EK ANR+ E+DP+  G ++LLANIY+AA  W + AK R  M + G++KTP CS +E+KN+
Sbjct: 522 EKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNK 581

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKL 748
           V++F +G   HP  ++I   +E L++ ++  GYVPDT+ + HDVE+  ++ L+ SHSE+L
Sbjct: 582 VYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERL 641

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           AI FG++N+  G TI + KNLRVC DCH ATK+IS + GREI+VRD  RFH FKNG CSC
Sbjct: 642 AIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSC 701

Query: 809 GDYW 812
           GDYW
Sbjct: 702 GDYW 705



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 245/499 (49%), Gaps = 49/499 (9%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++   N L D+ R+F  I       + ++++ Y        ++   I M    + P    
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA-------- 192
           +  +LK C  + ++  G+ +HG +I  G   DL+    ++NMY+K   +EE+        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 193 ------------------------YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
                                    K+F+ MPE+DLVSWNTI+AG A+NG  E  L ++ 
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M     + D  T+ S+LP +A    +  GK +HG ++R G D+ + V+++L+DMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           RV  +  VF  +  R+ +SWNS+IA  V+ G  +E +R F++ML   ++P + +    + 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACA L  L  G  +H  + +     ++ + +SL+ MY+KC  +  A  IF +++ + +VS
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           W AMI+G A +G+  +A+  F +M ++ IK       +V+ A +   ++  A K+ +++ 
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMT 461

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV----TTWNVMIDGYGTHGLG 523
                   V    A+ D+  + G +  A   +D +   H+    + W  ++     H   
Sbjct: 462 RDFGIAPGVEHYAAVSDLLGRAGRLEEA---YDFICGMHIGPTGSIWATLLSACRVHKNI 518

Query: 524 KAAVELFNKMLEGPTKPND 542
             A ++ N++LE    PN+
Sbjct: 519 DMAEKVANRILE--VDPNN 535



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 11/280 (3%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I+ GL       + L+ ++ K   ++D+ RVF  + ++    +++++ G  +    D+ +
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  +M    + P  Y+++ ++  C  +  +  GK++HG +  NGF  ++F  + +V+MY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A ++FDRM  RD+VSW  ++ G A +G A  A++L  +M  EG       I 
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG-------IK 438

Query: 244 SILPAVANVGSL-RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           ++L A ++ G +    K  +      G    V    A+ D+  + GR+E A     GM  
Sbjct: 439 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 498

Query: 303 RNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
               S W ++++A     N + A ++  ++L+  V+P N 
Sbjct: 499 GPTGSIWATLLSACRVHKNIDMAEKVANRILE--VDPNNT 536


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/696 (37%), Positives = 411/696 (59%), Gaps = 6/696 (0%)

Query: 121  DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            +AV   + M    VA     +  +L V   +  +  GK+IHG ++ +G    +     ++
Sbjct: 889  EAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLI 948

Query: 181  NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            NMY K G +  A  +F +M E DLVSWNT+++G A +G  E ++ +   +   G   D  
Sbjct: 949  NMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQF 1008

Query: 241  TIVSILPAVANVGS-LRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETARLVF 297
            T+ S+L A +++G    +   +H  AM+AG   DS V  ST L+D+Y+K G++E A  +F
Sbjct: 1009 TVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFV--STTLIDVYSKSGKMEEAEFLF 1066

Query: 298  DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
                  ++ SWN+M+  Y+  G+  +A+R++  M + G     +T+  A  A   L  L+
Sbjct: 1067 VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLK 1126

Query: 358  RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            +G  +  ++ +     D+ + + ++ MY KC +++ A  IF+++     V+W  MI G  
Sbjct: 1127 QGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCV 1186

Query: 418  QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            +NG+   AL  +  MR   ++PD +T  +++ A + L+ +   + IHA  ++     + F
Sbjct: 1187 ENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPF 1246

Query: 478  VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
            VMT+L+DMYAKCG +  AR LF   N   + +WN MI G   HG  + A++ F +M    
Sbjct: 1247 VMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRG 1306

Query: 538  TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
              P+ +TF+  +SACSHSGLV E    F S++K YGIEP ++HY  +VD L RAGR+ EA
Sbjct: 1307 VTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREA 1366

Query: 598  WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
               I  MP E   +++  +L AC++  + E G++ A +L  L+P +   +VLL+N+YAAA
Sbjct: 1367 EKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAA 1426

Query: 658  SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
            + W+ +A  R +M K  ++K PG S V+LKN+VH F +G   H ++  IY  +E ++  I
Sbjct: 1427 NQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRI 1486

Query: 718  KAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
            +  GY+PDT+ ++ DVE+  +E  L  HSEKLAIA+GL+ + P +T+ + KNLRVCGDCH
Sbjct: 1487 REEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCH 1546

Query: 777  NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            NA KYIS V  RE+++RD +RFH F++GVCSCGDYW
Sbjct: 1547 NAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 226/448 (50%), Gaps = 2/448 (0%)

Query: 57   RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
            ++I  ++++SGL         L++++ K  S+S A  VF  + +     ++TM+ G A  
Sbjct: 926  KQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALS 985

Query: 117  ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFA 175
               + +V   + +    + P  +    +L+ C  + G      +IH   +  G  LD F 
Sbjct: 986  GLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFV 1045

Query: 176  MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
             T ++++Y+K G++EEA  +F      DL SWN ++ G+  +G    AL L   M E G 
Sbjct: 1046 STTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGE 1105

Query: 236  RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            R + IT+ +   A   +  L+ GK +    ++ GF+  + V + ++DMY KCG +E+AR 
Sbjct: 1106 RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR 1165

Query: 296  VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
            +F+ + S + V+W +MI+  VE G  E A+  +  M    V+P   T    + AC+ L  
Sbjct: 1166 IFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTA 1225

Query: 356  LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            LE+G  +H    +L    D  +  SL+ MY+KC  ++ A  +F +     + SWNAMI+G
Sbjct: 1226 LEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVG 1285

Query: 416  YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEK 474
             AQ+G   EAL +F +M+S+ + PD  T + V+ A +   ++  A +  +++      E 
Sbjct: 1286 LAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEP 1345

Query: 475  NVFVMTALIDMYAKCGAVGTARALFDMM 502
             +   + L+D  ++ G +  A  +   M
Sbjct: 1346 EIEHYSCLVDALSRAGRIREAEKVISSM 1373



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 220/451 (48%), Gaps = 43/451 (9%)

Query: 157  GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGF 214
            GK  H +++ +G   D F    ++ MY+KCG +  A K+FD  P+  RDLV+WN I++  
Sbjct: 645  GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704

Query: 215  A---QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            A   ++GF      L+ R      R    T+  +        S    +++HGYA++ G  
Sbjct: 705  ADKARDGFH--LFRLLRRSFVSATRH---TLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759

Query: 272  SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
              V V+ ALV++YAK GR+  AR++FDGM  R+VV WN M+ AYV+ G   EA+ +F + 
Sbjct: 760  WDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819

Query: 332  LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
               G+ P +VT    L   A +   ++ +   +L      GT + M              
Sbjct: 820  NRTGLRPDDVT----LCTLARVVKSKQNVLEWQLKQLKAYGTKLFM-------------- 861

Query: 392  DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
                       G  +++WN  +  + Q G   EA++ F  M +  +  D  T V ++  +
Sbjct: 862  -----YDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVV 916

Query: 452  AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
            A L+ +   K IH +V+RS  ++ V V   LI+MY K G+V  AR +F  MNE  + +WN
Sbjct: 917  AGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWN 976

Query: 512  VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK- 570
             MI G    GL + +V +F  +L G   P+  T    + ACS  G    G H  T +   
Sbjct: 977  TMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG---GGCHLATQIHAC 1033

Query: 571  --DYGIEPVMDHY--GAMVDLLGRAGRLNEA 597
                G+  V+D +    ++D+  ++G++ EA
Sbjct: 1034 AMKAGV--VLDSFVSTTLIDVYSKSGKMEEA 1062



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 214/428 (50%), Gaps = 7/428 (1%)

Query: 203  DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
            D+++WN  ++ F Q G    A+D    M       D +T V +L  VA +  L +GK +H
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929

Query: 263  GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            G  +R+G D +V+V   L++MY K G V  AR VF  M   ++VSWN+MI+     G  E
Sbjct: 930  GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989

Query: 323  EAMRIFQKMLDQGVEPTNVTIMEALHACADL-GDLERGIFVHKLLDQLKLGTDVSMTNSL 381
             ++ +F  +L  G+ P   T+   L AC+ L G       +H    +  +  D  ++ +L
Sbjct: 990  CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049

Query: 382  ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
            I +YSK  K++ A  +F    G  L SWNAM+ GY  +G   +AL  +  M+    + + 
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109

Query: 442  FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
             T+ +   A   L  ++  K I A+V++  F  ++FV++ ++DMY KCG + +AR +F+ 
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169

Query: 502  MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
            +       W  MI G   +G  + A+  ++ M     +P++ TF   + ACS    +E+G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229

Query: 562  --IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
              IH  T +K +   +P +    ++VD+  + G + +A    ++      I  + AM+  
Sbjct: 1230 RQIHANT-VKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSR-IASWNAMIVG 1285

Query: 620  CKIHKNVE 627
               H N E
Sbjct: 1286 LAQHGNAE 1293



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 184/716 (25%), Positives = 298/716 (41%), Gaps = 98/716 (13%)

Query: 57   RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHTMLKGYA 114
            +R    I+ SG          L++++ K  SLS A ++F+  PD    L  ++ +L  +A
Sbjct: 646  KRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA 705

Query: 115  KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
              A   D       +R   V+   +    + K+C         + +HG  +  G   D+F
Sbjct: 706  DKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVF 763

Query: 175  AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
                +VN+YAK G+I EA  +FD M  RD+V WN ++  +   G    AL L +  +  G
Sbjct: 764  VAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG 823

Query: 235  RRGDFITIVSILPAV---ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             R D +T+ ++   V    NV   ++ K +  Y  +             + MY       
Sbjct: 824  LRPDDVTLCTLARVVKSKQNVLEWQL-KQLKAYGTK-------------LFMYDDD---- 865

Query: 292  TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
                        +V++WN  ++ +++ G   EA+  F  M++  V    +T +  L   A
Sbjct: 866  --------DDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVA 917

Query: 352  DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
             L  LE G  +H ++ +  L   VS+ N LI+MY K   V RA  +F ++    LVSWN 
Sbjct: 918  GLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNT 977

Query: 412  MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL-SVIRYAKWIHALVIRS 470
            MI G A +G    ++  F  +    + PD FT+ SV+ A + L      A  IHA  +++
Sbjct: 978  MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037

Query: 471  CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
                + FV T LID+Y+K G +  A  LF   +   + +WN M+ GY   G    A+ L+
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097

Query: 531  NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG-------- 582
              M E   + N IT   A  A    GLV         LK+   I+ V+   G        
Sbjct: 1098 ILMQESGERANQITLANAAKAA--GGLV--------GLKQGKQIQAVVVKRGFNLDLFVI 1147

Query: 583  -AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN------- 634
              ++D+  + G +  A     ++P  P    +  M+  C     VE G++          
Sbjct: 1148 SGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGC-----VENGQEEHALFTYHHM 1201

Query: 635  RLFELDPDEGGYHVLL----------------ANI---------YAAASMWDKLAKVRTI 669
            RL ++ PDE  +  L+                AN          +   S+ D  AK   I
Sbjct: 1202 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNI 1261

Query: 670  MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
             + +GL K    S +   N   +   G  +H  ++    F E    E+K+ G  PD
Sbjct: 1262 EDARGLFKRTNTSRIASWN---AMIVGLAQHGNAEEALQFFE----EMKSRGVTPD 1310



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 8/292 (2%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            LK+ ++I  +++K G        + ++ ++ K   +  A R+F  IP   D  + TM+ G
Sbjct: 1125 LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISG 1184

Query: 113  YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
              +    + A+     MR   V P  Y +  L+K C  +  + +G++IH   +    + D
Sbjct: 1185 CVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFD 1244

Query: 173  LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
             F MT +V+MYAKCG IE+A  +F R     + SWN ++ G AQ+G AE AL     M  
Sbjct: 1245 PFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKS 1304

Query: 233  EGRRGDFITIVSILPAVANVGSLRIGKAVHG-YAMRA--GFDSIVNVSTALVDMYAKCGR 289
             G   D +T + +L A ++ G   + +A    Y+M+   G +  +   + LVD  ++ GR
Sbjct: 1305 RGVTPDRVTFIGVLSACSHSG--LVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGR 1362

Query: 290  VETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +  A  V   M      S + +++ A     + E   R+ +K+L   +EP++
Sbjct: 1363 IREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL--ALEPSD 1412



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 163/382 (42%), Gaps = 31/382 (8%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM--K 301
           SIL        L +GK  H   + +G      ++  L+ MY+KCG + +AR +FD     
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           SR++V+WN++++A+ +     +   +F+ +    V  T  T+      C           
Sbjct: 691 SRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H    ++ L  DV +  +L+++Y+K  ++  A  +F  +  + +V WN M+  Y   G 
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             EAL  F +     ++PD  T+ ++                 A V++S  ++NV     
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTLCTL-----------------ARVVKS--KQNVLEW-- 847

Query: 482 LIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
                 +  A GT   ++D  ++   V  WN  +  +   G    AV+ F  M+      
Sbjct: 848 ---QLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + +TF+  +S  +    +E G      + +  G++ V+     ++++  + G ++ A   
Sbjct: 905 DGLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTV 963

Query: 601 IQKMPIEPGITVFGAMLGACKI 622
             +M  E  +  +  M+  C +
Sbjct: 964 FWQMN-EVDLVSWNTMISGCAL 984


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/773 (34%), Positives = 445/773 (57%), Gaps = 9/773 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           +L++  C  LK+    R+I+  ++KSGL  +   +  L+S+     ++  A  +F+ + +
Sbjct: 147 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMR--YDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           +    ++++   YA+   ++++      MR  +D+V       + LL V G V   + G+
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV--STLLSVLGHVDHQKWGR 264

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IHG ++  GF   +     ++ MYA  G+  EA  +F +MP +DL+SWN+++A F  +G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
            +  AL L+  M   G+  +++T  S L A         G+ +HG  + +G      +  
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV MY K G +  +R V   M  R+VV+WN++I  Y E  +P++A+  FQ M  +GV  
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444

Query: 339 TNVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +T++  L AC   GDL ERG  +H  +      +D  + NSLI+MY+KC  +  + D+
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F+ L  + +++WNAM+   A +G   E L    KMRS  +  D F+    + A A+L+V+
Sbjct: 505 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 564

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              + +H L ++  FE + F+  A  DMY+KCG +G    +      R + +WN++I   
Sbjct: 565 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
           G HG  +     F++MLE   KP  +TF+  ++ACSH GLV++G+ Y+  + +D+G+EP 
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 684

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++H   ++DLLGR+GRL EA  FI KMP++P   V+ ++L +CKIH N++ G KAA  L 
Sbjct: 685 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 744

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           +L+P++   +VL +N++A    W+ +  VR  M  K ++K   CS V+LK++V SF  G 
Sbjct: 745 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 804

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLN 756
             HPQ+  IY  LE +   IK +GYV DT+ ++ D ++  +E+ L +HSE+LA+A+ L++
Sbjct: 805 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMS 864

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +  GST+ I KNLR+C DCH+  K++S V GR I++RD +RFH F+ G+   G
Sbjct: 865 TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 288/548 (52%), Gaps = 8/548 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            +E  ++   + KSGL       T ++ L+  Y  +S + +VFE +PD+    + +++ G
Sbjct: 58  FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y+     ++ +     MR + V     + + ++  CG + +   G++I GQ++ +G    
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL---DLVTR 229
           L     +++M    G ++ A  +FD+M ERD +SWN+I A +AQNG  E +     L+ R
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
            H+E    +  T+ ++L  + +V   + G+ +HG  ++ GFDS+V V   L+ MYA  GR
Sbjct: 238 FHDEV---NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              A LVF  M +++++SWNS++A++V  G   +A+ +   M+  G     VT   AL A
Sbjct: 295 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C      E+G  +H L+    L  +  + N+L+SMY K  ++  +  +  ++  + +V+W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVI 468
           NA+I GYA++   ++AL  F  MR + +  +  T+VSV+ A L    ++   K +HA ++
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            + FE +  V  +LI MYAKCG + +++ LF+ ++ R++ TWN M+     HG G+  ++
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 534

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           L +KM       +  +F   +SA +   ++EEG      L    G E     + A  D+ 
Sbjct: 535 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMY 593

Query: 589 GRAGRLNE 596
            + G + E
Sbjct: 594 SKCGEIGE 601



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 251/534 (47%), Gaps = 8/534 (1%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI-RR 156
           +P + +  ++TM+ G  +     + + F  +M    + P  +    L+  CG  G + R 
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G ++HG +  +G   D++  T ++++Y   G +  + K+F+ MP+R++VSW +++ G++ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G  E  +D+   M  EG   +  ++  ++ +   +    +G+ + G  +++G +S + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             +L+ M    G V+ A  +FD M  R+ +SWNS+ AAY + G+ EE+ RIF  M     
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           E  + T+   L     +   + G  +H L+ ++   + V + N+L+ MY+   +   A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++  K L+SWN+++  +  +GR  +AL   C M S     +  T  S + A      
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
               + +H LV+ S    N  +  AL+ MY K G +  +R +   M  R V  WN +I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG-LVEEG--IHYFTSLKKDYG 573
           Y        A+  F  M       N IT +  +SAC   G L+E G  +H +       G
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV---SAG 477

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
            E       +++ +  + G L+ + D    +     I  + AML A   H + E
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 530


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/675 (40%), Positives = 413/675 (61%), Gaps = 18/675 (2%)

Query: 154 IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMF-DRMPER-DLVSWNT 209
           +R G+E H   + NG       FA   +++MYA+ G + +A ++F    P R D+V+WNT
Sbjct: 30  VRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT 89

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +V+   Q+G  + A+  +  M   G R D +T  S LPA + +  L +G+ +H Y ++  
Sbjct: 90  MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD- 148

Query: 270 FDSIVN---VSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEA 324
            D +     V++ALVDMYA   +V  AR VFD +    + +  WN+MI  Y + G  EEA
Sbjct: 149 -DELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 207

Query: 325 MRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +R+F +M  + G  P   T+   L ACA          VH  + +  +  +  + N+L+ 
Sbjct: 208 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 267

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS---KNIKPD 440
           MY++  K D A  IF+ +    +VSWN +I G    G V +A     +M+      + P+
Sbjct: 268 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 327

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           + T+++++P  A L+     K IH   +R   + +V V +AL+DMYAKCG +  +RA+FD
Sbjct: 328 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 387

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVE 559
            +  R+  TWNV+I  YG HGLG  A  LF++M   G  +PN++TF+ A++ACSHSG+V+
Sbjct: 388 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 447

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLG 618
            G+  F ++++D+G+EP  D    +VD+LGRAGRL+EA+  +  M   E  ++ +  MLG
Sbjct: 448 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++H+NV LGE A  RL EL+P+E  ++VLL NIY+AA  W + A+VR+ M ++G+ K 
Sbjct: 508 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 567

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PGCS +E+   +H F +G + HP S+ ++  +E L  E+ A GY PDT+ + HD++D  +
Sbjct: 568 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 627

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L  HSEKLAIAFGLL ++PG+TI + KNLRVC DCH A K++S + GREI++RD+ R
Sbjct: 628 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 687

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG CSCGDYW
Sbjct: 688 FHHFRNGQCSCGDYW 702



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 240/482 (49%), Gaps = 21/482 (4%)

Query: 57  RRILPLIIKSGLCDQH--LFQTKLVSLFCKYNSLSDAARVFE-PIPDKLDAL-YHTMLKG 112
           R      +K+GL   H       L+S++ +   ++DA R+F    P + D + ++TM+  
Sbjct: 34  REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 93

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSL 171
             +    D+AV  L  M    V P    +   L  C  +  +  G+E+H  +I +   + 
Sbjct: 94  LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 153

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTR 229
           + F  + +V+MYA   Q+ +A ++FD +P+  + L  WN ++ G+AQ G  E AL L  R
Sbjct: 154 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 213

Query: 230 MHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           M  E     F+    T+ S+LPA A   +    +AVHGY ++ G      V  AL+DMYA
Sbjct: 214 MEAE---AGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 270

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI---FQKMLDQGVEPTNVT 342
           + G+ + AR +F  +   +VVSWN++I   V  G+  +A ++    Q++ + GV P  +T
Sbjct: 271 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 330

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +M  L  CA L    RG  +H    +  L TDV++ ++L+ MY+KC  +  +  +F +L 
Sbjct: 331 LMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 390

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVI-RYA 460
            +  ++WN +I+ Y  +G   EA   F +M  S   +P+  T ++ + A +   ++ R  
Sbjct: 391 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 450

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYG 518
           +  HA+      E    ++  ++D+  + G +  A A+   M   E+ V+ W+ M+    
Sbjct: 451 QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACR 510

Query: 519 TH 520
            H
Sbjct: 511 LH 512



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 226/467 (48%), Gaps = 38/467 (8%)

Query: 240 ITIVSILPAV----ANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETA 293
            T+VS+L AV    A   ++R+G+  H +A++ G           AL+ MYA+ G V  A
Sbjct: 11  FTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADA 70

Query: 294 RLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
           + +F G      +VV+WN+M++  V+ G  +EA++    M+  GV P  VT   AL AC+
Sbjct: 71  QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 130

Query: 352 DLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVS 408
            L  L+ G  +H  ++   +L  +  + ++L+ MY+  ++V +A  +F  +   GK L  
Sbjct: 131 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 190

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           WNAMI GYAQ G   EAL  F +M ++    P   TM SV+PA A        + +H  V
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 250

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           ++     N FV  AL+DMYA+ G    AR +F M++   V +WN +I G    G    A 
Sbjct: 251 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 310

Query: 528 ELFNKML---EGPTKPNDITFL-----CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           +L  +M    EG   PN IT +     CAI A    G    G     +L  D  +     
Sbjct: 311 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS--- 367

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA---NRL 636
              A+VD+  + G L  +     ++P    IT +  ++ A  +H    LG +A    +R+
Sbjct: 368 ---ALVDMYAKCGCLALSRAVFDRLPRRNTIT-WNVLIMAYGMHG---LGGEATVLFDRM 420

Query: 637 F---ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK-GLQKTP 679
               E  P+E  +   LA   + + M D+  ++   ME+  G++ TP
Sbjct: 421 TASGEARPNEVTFMAALAAC-SHSGMVDRGLQLFHAMERDHGVEPTP 466



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 192/382 (50%), Gaps = 16/382 (4%)

Query: 47  LEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD-- 100
           L  C+ L+ L   R +   +IK   L       + LV ++  +  +  A +VF+ +PD  
Sbjct: 126 LPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSG 185

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K   +++ M+ GYA+    ++A+    RM  +    P       +L  C    E   GKE
Sbjct: 186 KQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR-SEAFAGKE 244

Query: 160 -IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +HG ++  G + + F    +++MYA+ G+ + A ++F  +   D+VSWNT++ G    G
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304

Query: 219 FAELALDLVTRMH---EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
               A  L   M    E G   + IT++++LP  A + +   GK +HGYA+R   D+ V 
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA 364

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V +ALVDMYAKCG +  +R VFD +  RN ++WN +I AY   G   EA  +F +M   G
Sbjct: 365 VGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASG 424

Query: 336 -VEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
              P  VT M AL AC+  G ++RG+   H +     +     +   ++ +  +  ++D 
Sbjct: 425 EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDE 484

Query: 394 AADIFSKLQ-GKTLVS-WNAMI 413
           A  + + ++ G+  VS W+ M+
Sbjct: 485 AYAMVTSMEAGEQQVSAWSTML 506


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/632 (41%), Positives = 397/632 (62%), Gaps = 14/632 (2%)

Query: 195 MFDRMPERDLV-SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           MF +  ++  V SWN+I+A FA++G +  AL   + M +     +  T    + + +++ 
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  GK +H  A   G+ S + V++AL+DMY+KCG +  AR +FD +  RNVVSW SMI+
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160

Query: 314 AYVEGGNPEEAMRIFQKML-----------DQGVEPTNVTIMEALHACADLGDLERGIFV 362
            YV+     EA+ +F++ L             GV   +V +   + ACA +        V
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECV 220

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H L  +      +++ N+L+  Y+KC ++  +  +F  ++   + SWN++I  YAQNG  
Sbjct: 221 HGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLS 280

Query: 423 NEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            EA + F  M +   ++ ++ T+ +V+ A A    ++  K IH  V++   E N+ V T+
Sbjct: 281 VEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTS 340

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           ++DMY KCG V  AR  FD +  ++V +W VM+ GYG HG GK A+++F +M+    KPN
Sbjct: 341 IVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            ITF+  ++ACSH+GL++EG H+F  +K ++ +EP ++HY  MVDLLGRAG L EA+  I
Sbjct: 401 YITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLI 460

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
           Q+M ++P   V+G++LGAC+IHKNVELGE +A +LF+LDP   GY+VLL+NIYA A  WD
Sbjct: 461 QEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWD 520

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
            + ++R +M+  GL KTPG S+VE K  VH F  G  +HPQ ++IY +L+ L  +++  G
Sbjct: 521 DVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVG 580

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           Y+P+  S+ +DV+   +  +L  HSEKLA+AFG++NS PGS I I KNLR+CGDCH A K
Sbjct: 581 YMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIK 640

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IS +  REI++RD  RFH FK+G+CSCGDYW
Sbjct: 641 LISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 253/515 (49%), Gaps = 55/515 (10%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++++  +A+      A+     MR   + P    +   +K C  + ++  GK+IH Q  
Sbjct: 54  WNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAF 113

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V G+  D+F  + +++MY+KCG + +A K+FD +PER++VSW ++++G+ QN  A  A+ 
Sbjct: 114 VFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVF 173

Query: 226 LVT-----------RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           L              +   G   D + +  ++ A A V    + + VHG A++ GF+  +
Sbjct: 174 LFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCL 233

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V   L+D YAKCG +  +R VFDGM+  +V SWNS+IA Y + G   EA  +F  M+ +
Sbjct: 234 AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKR 293

Query: 335 G-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           G V    VT+   L ACA  G L+ G  +H  + +++L  ++ +  S++ MY KC +V+ 
Sbjct: 294 GEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEM 353

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A   F +L+ K + SW  M+ GY  +G   EA+  F +M    IKP+  T VSV+ A + 
Sbjct: 354 ARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSH 413

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
             +++    W + +                     KC         FD+  E  +  ++ 
Sbjct: 414 AGLLKEGWHWFNKM---------------------KCE--------FDV--EPGIEHYSC 442

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           M+D  G  G  K A  L  +M     KP+ I +   + AC     VE G     S +K +
Sbjct: 443 MVDLLGRAGYLKEAYGLIQEM---KVKPDFIVWGSLLGACRIHKNVELG---EISARKLF 496

Query: 573 GIEPV-MDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
            ++P    +Y  + ++   AGR    WD +++M I
Sbjct: 497 KLDPSNCGYYVLLSNIYADAGR----WDDVERMRI 527



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 202/384 (52%), Gaps = 17/384 (4%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           ++ C+SL +L   ++I       G        + L+ ++ K   L+DA ++F+ IP++  
Sbjct: 93  IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152

Query: 104 ALYHTMLKGYAKFASLDDAV----SFLI--RMRYDDVAPVVYNYTYLL-----KVCGDVG 152
             + +M+ GY +     +AV     FL+     YD++  V      +L       C  V 
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
                + +HG  +  GF   L     +++ YAKCG+I  + K+FD M E D+ SWN+++A
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIA 272

Query: 213 GFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            +AQNG +  A  L + M + G  R + +T+ ++L A A+ G+L+IGK +H   ++   +
Sbjct: 273 VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE 332

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             + V T++VDMY KCGRVE AR  FD +K +NV SW  M+A Y   G+ +EAM++F +M
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           +  G++P  +T +  L AC+  G L+ G  + +K+  +  +   +   + ++ +  +   
Sbjct: 393 IRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGY 452

Query: 391 VDRAADIFSKLQGKT-LVSWNAMI 413
           +  A  +  +++ K   + W +++
Sbjct: 453 LKEAYGLIQEMKVKPDFIVWGSLL 476



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L +K G          L+  + K   +S + +VF+ + +     +++++  YA+     +
Sbjct: 223 LAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVE 282

Query: 122 AVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           A S    M +  +V       + +L  C   G ++ GK IH Q++      +L   T +V
Sbjct: 283 AFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIV 342

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MY KCG++E A K FDR+  +++ SW  +VAG+  +G  + A+ +   M   G + ++I
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYI 402

Query: 241 TIVSILPAVANVGSLRIGKAVHGY-AMRAGFDSIVNVS--TALVDMYAKCGRVETARLVF 297
           T VS+L A ++ G L+ G   H +  M+  FD    +   + +VD+  + G ++ A  + 
Sbjct: 403 TFVSVLAACSHAGLLKEG--WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLI 460

Query: 298 DGMKSR-NVVSWNSMIAA 314
             MK + + + W S++ A
Sbjct: 461 QEMKVKPDFIVWGSLLGA 478


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/752 (34%), Positives = 437/752 (58%), Gaps = 3/752 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+  G          LV ++ +   L+ A +VF+ +P +    +++++ GY+     ++A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     ++   + P  +  + +L   G++  +++G+ +HG  + +G +  +    G+V M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y K  +  +A ++FD M  RD VS+NT++ G+ +    E ++ +     ++ +  D +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-PDLLTV 310

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+L A  ++  L + K ++ Y ++AGF     V   L+D+YAKCG + TAR VF+ M+ 
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++ VSWNS+I+ Y++ G+  EAM++F+ M+    +  ++T +  +     L DL+ G  +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H    +  +  D+S++N+LI MY+KC +V  +  IFS +     V+WN +I    + G  
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
              L    +MR   + PD  T +  +P  A L+  R  K IH  ++R  +E  + +  AL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           I+MY+KCG +  +  +F+ M+ R V TW  MI  YG +G G+ A+E F  M +    P+ 
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           + F+  I ACSHSGLV+EG+  F  +K  Y I+P+++HY  +VDLL R+ ++++A +FIQ
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            MPI+P  +++ ++L AC+   ++E  E+ + R+ EL+PD+ GY +L +N YAA   WDK
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           ++ +R  ++ K + K PG S +E+   VH F SG    PQS+ IY  LE L   +   GY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790

Query: 723 VPDTNSIHD--VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           +PD   +     E+  +  L+  HSE+LAIAFGLLN+ PG+ + + KNLRVCGDCH  TK
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IS + GREI+VRD +RFH FK+G CSC D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 323/617 (52%), Gaps = 15/617 (2%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI-PDKLDAL 105
           L   ++L ELRRI  L+I  GL     F  KL+  +  +   + +  VF  + P K   L
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++++++ ++K     +A+ F  ++R   V+P  Y +  ++K C  + +   G  ++ Q++
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             GF  DLF    +V+MY++ G +  A ++FD MP RDLVSWN++++G++ +G+ E AL+
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   +       D  T+ S+LPA  N+  ++ G+ +HG+A+++G +S+V V+  LV MY 
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           K  R   AR VFD M  R+ VS+N+MI  Y++    EE++R+F + LDQ  +P  +T+  
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSS 312

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L AC  L DL    +++  + +     + ++ N LI +Y+KC  +  A D+F+ ++ K 
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            VSWN++I GY Q+G + EA+  F  M     + D  T + +I     L+ +++ K +H+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             I+S    ++ V  ALIDMYAKCG VG +  +F  M      TWN +I      G    
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
            +++  +M +    P+  TFL  +  C+       G      L + +G E  +    A++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALI 551

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD----- 640
           ++  + G L  +    ++M     +T  G M+ A  ++     GEKA     +++     
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTG-MIYAYGMYGE---GEKALETFADMEKSGIV 607

Query: 641 PDEGGYHVLLANIYAAA 657
           PD     V +A IYA +
Sbjct: 608 PDS---VVFIAIIYACS 621



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 199/406 (49%), Gaps = 17/406 (4%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I   L + +N+  LR    +H   +  G DS    S  L+D Y+      ++  VF  + 
Sbjct: 10  ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66

Query: 302 -SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
            ++NV  WNS+I A+ + G   EA+  + K+ +  V P   T    + ACA L D E G 
Sbjct: 67  PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            V++ +  +   +D+ + N+L+ MYS+   + RA  +F ++  + LVSWN++I GY+ +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              EAL  + ++++  I PDSFT+ SV+PA   L V++  + +H   ++S     V V  
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            L+ MY K      AR +FD M+ R   ++N MI GY    + + +V +F + L+   KP
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKP 305

Query: 541 NDITFLCAISACSH-SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           + +T    + AC H   L      Y   LK  + +E  + +   ++D+  + G +  A D
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARD 363

Query: 600 FIQKM---------PIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
               M          I  G    G ++ A K+ K + + E+ A+ +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/771 (36%), Positives = 431/771 (55%), Gaps = 18/771 (2%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L+E RRI  ++  + +   H   T L+ ++ K +S+ DA +VF+ I  K    ++ M+  
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI--------HGQL 164
           YA+    + A+     M  + V      +  +L  C  + ++   K +        H  L
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
             + F+      T +VN Y  CG +E+A++ F R    +L+    ++  + Q    + AL
Sbjct: 236 HDSSFA------TALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEAL 288

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +L   M  EG + D I  +++L A +    L  G+ +HG+     FD  VN   AL++MY
Sbjct: 289 ELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMY 348

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG +E A  VF  M+ R+V+SWN++IAA+ +     EA+ +   M   GV+   ++ +
Sbjct: 349 GKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFV 408

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            AL  CA    L +G  +H  + +  +  DV + N+++ MY  CK  D A+ +F  ++ +
Sbjct: 409 NALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR 468

Query: 405 TLVSWNAMILGYAQNGRV-NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
             VSWNAMI  YA   R+ +EAL  F +M+     PD  + V+ + A A  + +   K +
Sbjct: 469 DQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLL 528

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  +  +  E N+ V  A+++MYAK G++  AR +F  M    V +WN MI  +  HG  
Sbjct: 529 HDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHA 588

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY-GIEPVMDHYG 582
              +  F +M      PND+TF+  +SACSH GLV++G+  F SL  D+  I P  +HY 
Sbjct: 589 DQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY 648

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL+ RAG+L+ A  FI   P++P   +   MLGA K+HK+VE   K+A  L EL PD
Sbjct: 649 CMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPD 708

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +V+L+N+Y      D+ AK+R +M +K ++K P  S + +K  VH F++G T + +
Sbjct: 709 RSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNAR 768

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +  I   LE L  E+  AGY PDT   +HDV D  ++ LLS HSEKLAIAFGL++++PG+
Sbjct: 769 TPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGT 828

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++ I KNLRVCGDCH ATK+IS +TGREI+VRD HRFH F NG CSCGDYW
Sbjct: 829 SLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 232/452 (51%), Gaps = 10/452 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL V  D   +  GKE+H ++  +      F    +V MY  CG + +A   FDRMP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-ANVGSLRIGK 259
            +D ++W  ++    Q G +E AL L   M  EG        V++L A  A+   L  G+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HG       +S   VST L+ MY KC  VE AR VFDG++ + VV WN+MI AY +  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSM 377
           + E+A+++F  ML +GV+   +T +  L AC+ L DLE    V   +++ +     D S 
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L++ Y  C  +++A   FS+ + + +++  AMI  Y Q  R +EAL  F  M  + +
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           K D    ++V+ A +    +   + IH  +    F+++V    ALI+MY KCG++  A  
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  M  R V +WN +I  +G H     A+ L + M     K + I+F+ A+  C+ S  
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEA 419

Query: 558 VEEG--IHYF---TSLKKDYGIE-PVMDHYGA 583
           + +G  IH +   + +K D  ++  ++D YG+
Sbjct: 420 LAKGRMIHSWIVESGIKADVMLDNAILDMYGS 451



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 25/373 (6%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L  VA+  SL +GK VH    ++  D    +   LV MY  CG +  A+  FD M  ++
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC-ADLGDLERGIFVH 363
            ++W  +I A+ + G+ E+A+ +F+ M  +GV P N   +  L AC AD   LE G  +H
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            +L    + +D  ++ +L+ MY KC  V+ A  +F  ++ K +V WNAMI  YAQ     
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK-------NV 476
           +A+  F  M  + +K +  T + V+ A ++L  +  AK     +++ C E+       + 
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK-----LVKLCVEEREHDHLHDS 238

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERH---VTTWNVMIDGYGTHGLGKAAVELFNKM 533
              TAL++ Y  CG +  A   F     RH   +     MI  Y        A+ELF  M
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAF----SRHRLELILATAMITQYTQRERWDEALELFKVM 294

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           L    K + I  +  ++ACS    +EEG  IH F    ++   +  ++   A++++ G+ 
Sbjct: 295 LLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFM---REIRFDRHVNAGNALINMYGKC 351

Query: 592 GRLNEAWDFIQKM 604
           G L EA +  + M
Sbjct: 352 GSLEEAVEVFRSM 364



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 8/254 (3%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L +C + + L   R I   I++SG+    +    ++ ++    S  DA+RVF  +  +  
Sbjct: 411 LPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQ 470

Query: 104 ALYHTMLKGYAKFASL-DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             ++ M+  YA    L  +A+    +M+     P V ++   L  C     +  GK +H 
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD 530

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   G   ++     V+NMYAK G +  A KMF +MP  D++SWN +++ FAQ+G A+ 
Sbjct: 531 RIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQ 590

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST---A 279
            L    RM+ EG+  + +T VS++ A ++ G ++ G  +   ++   F +I   +     
Sbjct: 591 VLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLF-VSLLHDFPTISPRAEHYYC 649

Query: 280 LVDMYAKCGRVETA 293
           +VD+ A+ G+++ A
Sbjct: 650 MVDLIARAGKLDAA 663


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/800 (35%), Positives = 434/800 (54%), Gaps = 73/800 (9%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK--YNSLSDAARVFEPIPDKLDA 104
           L+ C ++K+  +IL  +I SG        ++L+    +  + +++ + ++F  I +    
Sbjct: 33  LQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGF 92

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           + +TM+KGY +  S   A+     M   +VA   Y Y  L + C        GK I   +
Sbjct: 93  ICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHV 152

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF  D++    ++NMYA CG + +A K+FD     D+VSWN+++AG+   G  E A 
Sbjct: 153 LKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAK 212

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D+  RM E                                         V  S +++ ++
Sbjct: 213 DVYDRMPERN---------------------------------------VIASNSMIVLF 233

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            K G VE A  +F+ MK +++VSW+++I+ Y +    EEA+ +F++M   G+    V ++
Sbjct: 234 GKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVL 293

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS------------------ 386
             L AC+ L  +  G  VH L+ ++ + T V++ N+LI MYS                  
Sbjct: 294 SVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCL 353

Query: 387 -------------KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
                        KC ++++A  +F  +  K  VSW+AMI GYAQ  R  E L  F +M+
Sbjct: 354 DQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQ 413

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            +  KPD   +VSVI A   L+ +   KWIHA + ++  + N+ + T LI+MY K G V 
Sbjct: 414 IEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVE 473

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  + E+ V+TWN +I G   +GL   +++ F++M E    PN+ITF+  + AC 
Sbjct: 474 DALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACR 533

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H GLV+EG  +F S+ +++ I P + HYG MVDLLGRAG L EA + I+ MP+ P ++ +
Sbjct: 534 HMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTW 593

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+LGACK + + E GE+   +L EL PD  G++VLL+NIYA+   W  + +VR +M + 
Sbjct: 594 GALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQH 653

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DV 732
           G+ KTPGCS++E    VH F +G   HPQ++ I   L+ +  ++K  GY PDT  +  D+
Sbjct: 654 GVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDI 713

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E  L  HSEKLAIAFGL+   P + I I KNLR+C DCH A K IS    REI+V
Sbjct: 714 DEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVV 773

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD HRFH FK G CSC DYW
Sbjct: 774 RDRHRFHHFKQGSCSCMDYW 793


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/812 (33%), Positives = 443/812 (54%), Gaps = 78/812 (9%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++ L+ CT + ++     I   +IK G       +  L++ + +   L  A +VF  +P+
Sbjct: 137 SVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN 196

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               L++  +    +   L   V    +M++  +         +L+ CG +G +   K+I
Sbjct: 197 PEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQI 256

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER------------------ 202
           HG +   G   D+     +++MY+K G++E A ++FD M  R                  
Sbjct: 257 HGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFL 316

Query: 203 -----------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
                            D+V+WN +++G   +G+ E  L+++ RM  EG + +  ++ S+
Sbjct: 317 NDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSV 376

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A++ +G L +GK  HGY +R GFD  V V T+L+DMY K   + +A+ VFD MK+RN+
Sbjct: 377 LQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNI 436

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
            +WNS+++ Y   G  E+A+R+  +M  +G++P                           
Sbjct: 437 FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP--------------------------- 469

Query: 366 LDQLKLGTDVSMTNSLISMYS--KCKKVDRAADIFSKLQGKT--LVSWNAMILGYAQNGR 421
                   D+   N +IS Y+   C K   A    +K  G T  +VSW A+I G +Q G 
Sbjct: 470 --------DLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGN 521

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             ++L +F +M+ + + P+S ++  ++ A A LS+++  K IH L IR+ F ++VFV TA
Sbjct: 522 NRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATA 581

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           LIDMY+K  ++  A  +F  +  + + +WN MI G+   GLGK A+ +FN+M +    P+
Sbjct: 582 LIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPD 641

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            ITF   +SAC +SGL+ EG  YF S+  DY I P ++HY  MVDLLGRAG L+EAWD I
Sbjct: 642 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 701

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
             MP++P  T++GA+LG+C+IHKN++  E AA  LF+L+P+    ++L+ N+Y+  + W+
Sbjct: 702 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 761

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
            +  +R +M   G++     S +++   VH F S    HP + +IY  L  L+ E+K  G
Sbjct: 762 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 821

Query: 722 YVPDTNSIHDVEDYVQ-ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           YVPD N ++   D V+ + +L SH+EKLAI +GL+    G  I + KN R+C DCH+A K
Sbjct: 822 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 881

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           YISLV  RE+ +RD  RFH F+ G CSC D+W
Sbjct: 882 YISLVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 239/550 (43%), Gaps = 101/550 (18%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+  LK C  V +I  G EIHG LI  GF LD++    ++N Y +C  +E+A ++F  MP
Sbjct: 136 YSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP 195

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
             + + WN  +    Q+   +  ++L  +M     + +  TIV +L A   +G+L   K 
Sbjct: 196 NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQ 255

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE--- 317
           +HGY  R G DS V++   L+ MY+K G++E AR VFD M++RN  SWNSMI++Y     
Sbjct: 256 IHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGF 315

Query: 318 --------------------------------GGNPEEAMRIFQKMLDQGVEPTNVTIME 345
                                            G  EE + I Q+M  +G +P + ++  
Sbjct: 316 LNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTS 375

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L A ++LG L  G   H  + +     DV +  SLI MY K   +  A  +F  ++ + 
Sbjct: 376 VLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRN 435

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           + +WN+++ GY+  G   +AL    +M  + IKPD  T   +I          YA W   
Sbjct: 436 IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG--------YAMW--- 484

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
                C ++ + V+        +  ++G            +V +W  +I G    G  + 
Sbjct: 485 ----GCGKEALAVL-------HQTKSLGLT---------PNVVSWTALISGSSQAGNNRD 524

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           +++ F +M +    PN  +  C + AC+   L+++G        ++  IE V     A++
Sbjct: 525 SLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA-TALI 583

Query: 586 DLLGRAGRLNEA--------------WDF--------------------IQKMPIEPGIT 611
           D+  ++  L  A              W+                     +QK+ + P   
Sbjct: 584 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 643

Query: 612 VFGAMLGACK 621
            F A+L ACK
Sbjct: 644 TFTALLSACK 653



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 229/485 (47%), Gaps = 40/485 (8%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEE 233
           A   +++ Y   G    A  +F     R+ + WN+ V  F  + G   + L++   +H +
Sbjct: 68  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 127

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   D       L     V  + +G  +HG  ++ GFD  V +  AL++ Y +C  +E A
Sbjct: 128 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 187

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             VF  M +   + WN  I   ++    ++ + +F+KM    ++    TI+  L AC  +
Sbjct: 188 NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 247

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           G L     +H  + +  L +DVS+ N LISMYSK  K++ A  +F  ++ +   SWN+MI
Sbjct: 248 GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMI 307

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPD--------------------------------- 440
             YA  G +N+A + F ++ S ++KPD                                 
Sbjct: 308 SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFK 367

Query: 441 --SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
             S +M SV+ A++EL  +   K  H  V+R+ F+ +V+V T+LIDMY K  ++ +A+A+
Sbjct: 368 PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAV 427

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M  R++  WN ++ GY   G+ + A+ L N+M +   KP+ +T+   IS  +  G  
Sbjct: 428 FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCG 487

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE---PGITVFGA 615
           +E +       K  G+ P +  + A++    +AG   ++  F  +M  E   P       
Sbjct: 488 KEALAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITC 546

Query: 616 MLGAC 620
           +L AC
Sbjct: 547 LLRAC 551


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/677 (38%), Positives = 392/677 (57%), Gaps = 38/677 (5%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +L++   +++ Y+K G++ E   +FD MP RD VSWN++++G+A  G    ++     M 
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 232 EEGRRGDF----ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK- 286
           +    G F    IT  ++L   +  G +++G+ +HG+ ++ GF S V V + LVDMY+K 
Sbjct: 134 KND--GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 287 ------------------------------CGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
                                         CGRVE ++ +F  M+ R+ +SW SMI  + 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G   +A+ IF++M  + ++    T    L AC  +  L+ G  VH  + +     ++ 
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + ++L+ MY KCK +  A  +F K+  K +VSW AM++GY QNG   EA+  F  M+   
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           I+PD FT+ SVI + A L+ +      HA  + S     + V  AL+ +Y KCG++  + 
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            LF+ ++ +   TW  ++ GY   G     + LF  ML    KP+ +TF+  +SACS +G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           LVE+G   F S+  ++GI P+ DHY  M+DL  RAGR+ EA +FI KMP  P    +  +
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L +C+ + N+++G+ AA  L ELDP     +VLL+++YAA   W+++A++R  M  KGL+
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PGCS ++ KN+VH F +    +P S +IY+ LE L  ++   GYVPD NS+ HDV D 
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDS 671

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +  +L+ HSEKLAIAFGLL   PG  I + KNLRVC DCHNATKYIS +T REI+VRD 
Sbjct: 672 EKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDT 731

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK+G CSCGD+W
Sbjct: 732 ARFHLFKDGTCSCGDFW 748



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 194/391 (49%), Gaps = 35/391 (8%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   ++K G        + LV ++ K   +S A +VF+ +P+K   +Y+T++ G  + 
Sbjct: 163 RQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRC 222

Query: 117 ASLDDAVSFLIRMRYDDVAPVV-------------------------------YNYTYLL 145
             ++D+      MR  D                                    Y +  +L
Sbjct: 223 GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVL 282

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
             CG V  ++ GK++H  +I   +  ++F  + +V+MY KC  I+ A  +F +M  +++V
Sbjct: 283 TACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVV 342

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW  ++ G+ QNG++E A+   + M + G   D  T+ S++ + AN+ SL  G   H  A
Sbjct: 343 SWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARA 402

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           + +G  S + VS ALV +Y KCG +E +  +F+ +  ++ V+W ++++ Y + G   E +
Sbjct: 403 LTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETI 462

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLIS 383
            +F+ ML  G++P  VT +  L AC+  G +E+G  IF   ++++  +         +I 
Sbjct: 463 GLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIF-ESMINEHGIVPIQDHYTCMID 521

Query: 384 MYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
           ++S+  +++ A +  +K+      +SW  ++
Sbjct: 522 LFSRAGRIEEARNFINKMPFSPDAISWATLL 552



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 136/271 (50%), Gaps = 2/271 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E +++   II++   D     + LV ++CK  ++  A  VF+ +  K    +  ML 
Sbjct: 290 ALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLV 349

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    ++AV     M+   + P  +    ++  C ++  +  G + H + + +G   
Sbjct: 350 GYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS 409

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     +V +Y KCG IE+++++F+ +  +D V+W  +V+G+AQ G A   + L   M 
Sbjct: 410 FITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML 469

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
             G + D +T + +L A +  G +  G  +    +   G   I +  T ++D++++ GR+
Sbjct: 470 AHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRI 529

Query: 291 ETARLVFDGMK-SRNVVSWNSMIAAYVEGGN 320
           E AR   + M  S + +SW +++++    GN
Sbjct: 530 EEARNFINKMPFSPDAISWATLLSSCRFYGN 560


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 301/810 (37%), Positives = 462/810 (57%), Gaps = 33/810 (4%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKE-----LRRILPLIIKSGLCDQHLFQTKLVSLF 82
            S   Y  SR   +    L+    SL E     L +I+  I KSGL       + LVS F
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR-YDDVAPVVYNY 141
            K  SLS A +VF  +  +     + ++ G  +    ++A    + M    DV+P   +Y
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP--ESY 311

Query: 142 TYLLK------VCGDVGEIRRGKEIHGQLIVNGFSLDLFAM-TGVVNMYAKCGQIEEAYK 194
             LL       +  +VG +++G+E+HG +I  G    +  +  G+VNMYAKCG I +A +
Sbjct: 312 VILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVA 250
           +F  M ++D VSWN+++ G  QNG    A++    M    RR D +    T++S L + A
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM----RRHDILPGSFTLISSLSSCA 426

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           ++   ++G+ +HG +++ G D  V+VS AL+ +YA+ G +   R +F  M   + VSWNS
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486

Query: 311 MIAAYVEGGNP-EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +I A         EA+  F      G +   +T    L A + L   E G  +H L  + 
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNY 428
            +  + +  N+LI+ Y KC ++D    IFS++ + +  V+WN+MI GY  N  + +AL+ 
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
              M     + DSF   +V+ A A ++ +     +HA  +R+C E +V V +AL+DMY+K
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLC 547
           CG +  A   F+ M  R+  +WN MI GY  HG G+ A++LF  M L+G T P+ +TF+ 
Sbjct: 667 CGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH+GL+EEG  +F S+   YG+ P ++H+  M D+LGRAG L++  DFI+KMP++
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786

Query: 608 PGITVFGAMLGAC--KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           P + ++  +LGAC     +  ELG+KAA  LF+L+P+    +VLL N+YAA   W+ L K
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK 846

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
            R  M+   ++K  G S V +K+ VH F +G   HP +  IY  L+ L  +++ AGYVP 
Sbjct: 847 ARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906

Query: 726 TN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR--KNLRVCGDCHNATKYI 782
           T  +++D+E   +E +LS HSEKLA+AF +L +   ST+ IR  KNLRVCGDCH+A KYI
Sbjct: 907 TGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S + GR+II+RD +RFH F++G CSC D+W
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 234/480 (48%), Gaps = 14/480 (2%)

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           VG     +  H +L  N    D++    ++N Y + G    A K+FD MP R+ VSW  I
Sbjct: 14  VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI--GKAVHGYAMRA 268
           V+G+++NG  + AL  +  M +EG   +    VS+L A   +GS+ I  G+ +HG   + 
Sbjct: 74  VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133

Query: 269 GFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            +     VS  L+ MY KC G V  A   F  ++ +N VSWNS+I+ Y + G+   A RI
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMY 385
           F  M   G  PT  T    +     L + +  +    +    K G  TD+ + + L+S +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFT- 443
           +K   +  A  +F++++ +  V+ N +++G  +     EA   F  M S  ++ P+S+  
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313

Query: 444 MVSVIP--ALAELSVIRYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVGTARALFD 500
           ++S  P  +LAE   ++  + +H  VI +   +  V +   L++MYAKCG++  AR +F 
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M ++   +WN MI G   +G    AVE +  M      P   T + ++S+C+     + 
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433

Query: 561 GIH-YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           G   +  SLK   GI+  +    A++ L    G LNE       MP    ++ + +++GA
Sbjct: 434 GQQIHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 262/546 (47%), Gaps = 28/546 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + +      A +VF+ +P +    +  ++ GY++     +A+ FL  M  + +   
Sbjct: 42  LINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSN 101

Query: 138 VYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAYK 194
            Y +  +L+ C ++G   I  G++IHG +    +++D      +++MY KC G +  A  
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
            F  +  ++ VSWN+I++ ++Q G    A  + + M  +G R    T  S++    ++  
Sbjct: 162 AFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221

Query: 255 --LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
             +R+ + +     ++G  + + V + LV  +AK G +  AR VF+ M++RN V+ N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281

Query: 313 AAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEAL---HACADLGDLERGIFVH----- 363
              V     EEA ++F  M     V P +  I+ +    ++ A+   L++G  VH     
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341

Query: 364 -KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             L+D +     V + N L++MY+KC  +  A  +F  +  K  VSWN+MI G  QNG  
Sbjct: 342 TGLVDFM-----VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EA+  +  MR  +I P SFT++S + + A L   +  + IH   ++   + NV V  AL
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG--THGLGKAAVELFNKMLEGPTKP 540
           + +YA+ G +   R +F  M E    +WN +I         L +A V   N    G  K 
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG-QKL 515

Query: 541 NDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           N ITF   +SA S     E G  IH   +LK +   E   ++  A++   G+ G ++   
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQIHGL-ALKNNIADEATTEN--ALIACYGKCGEMDGCE 572

Query: 599 DFIQKM 604
               +M
Sbjct: 573 KIFSRM 578


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/663 (39%), Positives = 394/663 (59%), Gaps = 38/663 (5%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G    A ++FD +P+ D  + +T+++    +G +  A+ + + + E G + D    ++  
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171

Query: 247 PAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
            A A  G +LR+ K VH  A R G  S V V  AL+  Y KC  VE AR VFD +  R+V
Sbjct: 172 KACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 230

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSW S+ + YV+ G P + M +F++M   GV+P  +T+   L ACA+L DL+ G  +H  
Sbjct: 231 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 290

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN--------------- 410
             +  +  ++ + ++L+S+Y+KC  V  A  +F  +  + +VSWN               
Sbjct: 291 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 350

Query: 411 --------------------AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
                               A+I G  +NGR  EA+  F KM+    KP+  T+ S++PA
Sbjct: 351 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPA 410

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            +    +R  K IH  V R     ++   TAL+ MYAKCG +  +R +FDMM  + V  W
Sbjct: 411 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 470

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI     HG GK A+ LF+KML    +PN +TF   +S CSHS LVEEG+  F S+ +
Sbjct: 471 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 530

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+ +EP  +HY  +VD+  RAGRLNEA+ FIQ MP+EP  + +GA+L AC+++KNVEL +
Sbjct: 531 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 590

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            +A +LFE++P+  G +V L NI   A MW + ++VR +M+++G+ KTPGCS +++ N+V
Sbjct: 591 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKV 650

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H+F  G   + +S +IY FL+ L++++K AGY PDT+ +  D++   +   L +HSEKLA
Sbjct: 651 HTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLA 710

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +AFG+LN +  STI + KNLR+CGDCHNA KY+S V G  I+VRD  RFH FKNG CSC 
Sbjct: 711 VAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCK 770

Query: 810 DYW 812
           D W
Sbjct: 771 DLW 773



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 226/476 (47%), Gaps = 39/476 (8%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           +L+ +       + A ++F+ IP        T++         ++A+     ++   + P
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +  +    K C   G+  R KE+H      G   D+F    +++ Y KC  +E A ++F
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +  RD+VSW ++ + + + GF    +D+   M   G + + +T+ SILPA A +  L+
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY- 315
            GK +HG+A+R G    + V +ALV +YAKC  V  AR+VFD M  R+VVSWN ++ AY 
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342

Query: 316 ----------------------------------VEGGNPEEAMRIFQKMLDQGVEPTNV 341
                                             +E G  EEA+ +F+KM   G +P  +
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402

Query: 342 TIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           TI   L AC+   +L  G  +H  +    K+G D++ T +L+ MY+KC  ++ + ++F  
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K +V+WN MI+  A +G   EAL  F KM    ++P+S T   V+   +   ++   
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 461 KWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMI 514
             I   + R    E +    + ++D+Y++ G +  A      M  E   + W  ++
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 142/338 (42%), Gaps = 48/338 (14%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  LK+L+    I    ++ G+       + LVSL+ K  S+ +A  VF+ +P + 
Sbjct: 271 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 330

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDV---------------------------- 134
              ++ +L  Y K    +   S  ++M  D V                            
Sbjct: 331 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 390

Query: 135 -------APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
                   P     + +L  C     +R GKEIH  +  +    DL + T ++ MYAKCG
Sbjct: 391 KMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 450

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            +  +  +FD M  +D+V+WNT++   A +G  + AL L  +M     + + +T   +L 
Sbjct: 451 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 510

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIV----NVSTALVDMYAKCGRVETARLVFDGMKSR 303
             ++   +  G  +       G D +V    N  + +VD+Y++ GR+  A     GM   
Sbjct: 511 GCSHSRLVEEGVQIFN---SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME 567

Query: 304 NVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
              S W +++AA     N E A    +K+ +  +EP N
Sbjct: 568 PTASAWGALLAACRVYKNVELAKISAKKLFE--IEPNN 603


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/738 (36%), Positives = 411/738 (55%), Gaps = 69/738 (9%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           +Y  +  G  G +R  + +  ++ +     ++F    +++M+AK G++ +A  +F  MPE
Sbjct: 69  SYYGETAGGAGGLRDARRLFDEIPLA--RRNVFTWNSLLSMFAKSGRLADARGVFAEMPE 126

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           RD VSW  +V G  + G    A+  +  M  +G      T+ ++L + A   +  +G+ V
Sbjct: 127 RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKV 186

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD----------------------- 298
           H + ++ G  S V V+ ++++MY KCG  ETA  VF+                       
Sbjct: 187 HSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRM 246

Query: 299 --------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHA 349
                    M  R++VSWN+MIA Y + G   +A+++F +ML +  + P   TI   L A
Sbjct: 247 DLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI------------ 397
           CA+LG++  G  VH  + + ++  +  +TN+LIS Y+K   V+ A  I            
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366

Query: 398 ---------------------FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
                                F  +  + +V+W AMI+GY QNGR +EA++ F  M +  
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            +P+S+T+ +V+   A L+ + Y K IH   IRS  E++  V  A+I MYA+ G+   AR
Sbjct: 427 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWAR 486

Query: 497 ALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
            +FD +  R  T TW  MI     HG G+ AV LF +ML    +P+ IT++  +SACSH+
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 546

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G V EG  Y+  +K ++ I P M HY  MVDLL RAG  +EA +FI++MP+EP    +G+
Sbjct: 547 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC++HKN EL E AA +L  +DP+  G +  +AN+Y+A   W   A++    ++K +
Sbjct: 607 LLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +K  G S   +++++H F +    HPQ   +Y     + +EIK AG+VPD  S+ HDV+D
Sbjct: 667 RKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDD 726

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
            ++E LLS HSEKLAIAFGL+++   +T+ + KNLRVC DCH A K IS VT REIIVRD
Sbjct: 727 ELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRD 786

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH F++G+CSC DYW
Sbjct: 787 ATRFHHFRDGLCSCKDYW 804



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 247/572 (43%), Gaps = 113/572 (19%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           L++ RR+   I    L  +++F    L+S+F K   L+DA  VF  +P++    +  M+ 
Sbjct: 81  LRDARRLFDEI---PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G  +     +A+  L+ M  D   P  +  T +L  C        G+++H  ++  G   
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDR-------------------------------MP 200
            +     V+NMY KCG  E A  +F+R                               MP
Sbjct: 198 CVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGK 259
            R +VSWN ++AG+ QNG    AL L +RM HE     D  TI S+L A AN+G++RIGK
Sbjct: 258 GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG-------------------- 299
            VH Y +R        V+ AL+  YAK G VE AR + D                     
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377

Query: 300 -------------MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
                        M +R+VV+W +MI  Y + G  +EA+ +F+ M+  G EP + T+   
Sbjct: 378 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAV 437

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKT 405
           L  CA L  L+ G  +H    +  L    S++N++I+MY++      A  +F ++   K 
Sbjct: 438 LSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKE 497

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            ++W +MI+  AQ+G+  EA+  F +M    ++PD  T V V+ A +           HA
Sbjct: 498 TITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACS-----------HA 546

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTH 520
                                   G V   +  +D +   H     ++ +  M+D     
Sbjct: 547 ------------------------GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 582

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           GL   A E   +M   P +P+ I +   +SAC
Sbjct: 583 GLFSEAQEFIRRM---PVEPDAIAWGSLLSAC 611


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/663 (39%), Positives = 394/663 (59%), Gaps = 38/663 (5%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G    A ++FD +P+ D  + +T+++    +G +  A+ + + + E G + D    ++  
Sbjct: 26  GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85

Query: 247 PAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
            A A  G +LR+ K VH  A R G  S V V  AL+  Y KC  VE AR VFD +  R+V
Sbjct: 86  KACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 144

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSW S+ + YV+ G P + M +F++M   GV+P  +T+   L ACA+L DL+ G  +H  
Sbjct: 145 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 204

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN--------------- 410
             +  +  ++ + ++L+S+Y+KC  V  A  +F  +  + +VSWN               
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264

Query: 411 --------------------AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
                               A+I G  +NGR  EA+  F KM+    KP+  T+ S++PA
Sbjct: 265 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPA 324

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            +    +R  K IH  V R     ++   TAL+ MYAKCG +  +R +FDMM  + V  W
Sbjct: 325 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 384

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI     HG GK A+ LF+KML    +PN +TF   +S CSHS LVEEG+  F S+ +
Sbjct: 385 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 444

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+ +EP  +HY  +VD+  RAGRLNEA+ FIQ MP+EP  + +GA+L AC+++KNVEL +
Sbjct: 445 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 504

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            +A +LFE++P+  G +V L NI   A MW + ++VR +M+++G+ KTPGCS +++ N+V
Sbjct: 505 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKV 564

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H+F  G   + +S +IY FL+ L++++K AGY PDT+ +  D++   +   L +HSEKLA
Sbjct: 565 HTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLA 624

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +AFG+LN +  STI + KNLR+CGDCHNA KY+S V G  I+VRD  RFH FKNG CSC 
Sbjct: 625 VAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCK 684

Query: 810 DYW 812
           D W
Sbjct: 685 DLW 687



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 226/476 (47%), Gaps = 39/476 (8%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           +L+ +       + A ++F+ IP        T++         ++A+     ++   + P
Sbjct: 17  RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +  +    K C   G+  R KE+H      G   D+F    +++ Y KC  +E A ++F
Sbjct: 77  DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +  RD+VSW ++ + + + GF    +D+   M   G + + +T+ SILPA A +  L+
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY- 315
            GK +HG+A+R G    + V +ALV +YAKC  V  AR+VFD M  R+VVSWN ++ AY 
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256

Query: 316 ----------------------------------VEGGNPEEAMRIFQKMLDQGVEPTNV 341
                                             +E G  EEA+ +F+KM   G +P  +
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316

Query: 342 TIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           TI   L AC+   +L  G  +H  +    K+G D++ T +L+ MY+KC  ++ + ++F  
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K +V+WN MI+  A +G   EAL  F KM    ++P+S T   V+   +   ++   
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 461 KWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMI 514
             I   + R    E +    + ++D+Y++ G +  A      M  E   + W  ++
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 142/338 (42%), Gaps = 48/338 (14%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  LK+L+    I    ++ G+       + LVSL+ K  S+ +A  VF+ +P + 
Sbjct: 185 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 244

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDV---------------------------- 134
              ++ +L  Y K    +   S  ++M  D V                            
Sbjct: 245 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 304

Query: 135 -------APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
                   P     + +L  C     +R GKEIH  +  +    DL + T ++ MYAKCG
Sbjct: 305 KMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 364

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            +  +  +FD M  +D+V+WNT++   A +G  + AL L  +M     + + +T   +L 
Sbjct: 365 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 424

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIV----NVSTALVDMYAKCGRVETARLVFDGMKSR 303
             ++   +  G  +       G D +V    N  + +VD+Y++ GR+  A     GM   
Sbjct: 425 GCSHSRLVEEGVQIFN---SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME 481

Query: 304 NVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
              S W +++AA     N E A    +K+ +  +EP N
Sbjct: 482 PTASAWGALLAACRVYKNVELAKISAKKLFE--IEPNN 517


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 277/728 (38%), Positives = 412/728 (56%), Gaps = 72/728 (9%)

Query: 155 RRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + G  +H + + +   L   F+   V++ YAK G ++ + + FDR+P+RD VSW T++ G
Sbjct: 61  KTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVG 120

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ ++  M  EG      T+ ++L +VA    L  GK VH + ++ G    
Sbjct: 121 YKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN 180

Query: 274 VNVSTALVDMYAKCGRVETARLVFD-------------------------------GMKS 302
           V+VS +L++MYAKCG    A++VFD                                M  
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIF 361
           R++V+WNSMI+ Y + G    A+ +F KML D  + P   T+   L ACA+L  L  G  
Sbjct: 241 RDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQ 300

Query: 362 VHKLLDQLKLGTDVS--MTNSLISMYSKCKKVD--------------------------- 392
           +H  +  +  G D+S  + N+LISMYS+C  V+                           
Sbjct: 301 IHSHI--VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358

Query: 393 ------RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
                  A +IF  L+ + +V+W AMI+GY Q+G   EA+N F  M  +  +P+S+T+ +
Sbjct: 359 KLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAA 418

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           ++   + L+ + + K IH   ++S    +V V  ALI MYAK G++ +A   FD++  ER
Sbjct: 419 MLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCER 478

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
              +W  MI     HG  + A+ELF  ML    +P+ IT++   SAC+H+GLV +G  YF
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             +K    I P + HY  MVDL GRAG L EA +FI+KMPIEP +  +G++L AC+++KN
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKN 598

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           ++LG+ AA RL  L+P+  G +  LAN+Y+A   W++ AK+R  M+   ++K  G S +E
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSH 744
           +K++VH+F      HPQ   IY  ++ + DEIK  GYVPDT S+ HD+E+ V+E +L  H
Sbjct: 659 VKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SEKLAIAFGL+++   +T+ I KNLRVC DCH A K+IS + GREIIVRD  RFH FK+G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778

Query: 805 VCSCGDYW 812
            CSC DYW
Sbjct: 779 FCSCRDYW 786



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 262/622 (42%), Gaps = 155/622 (24%)

Query: 46  LLEVCTSLKE-----------LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           LLE+CT+L +            + +   +IKSGL         L++++ K      A ++
Sbjct: 12  LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKL 71

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--------------------- 133
           F+ +P +    ++T+L  YAK   +D +  F  R+   D                     
Sbjct: 72  FDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAI 131

Query: 134 ----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                     + P  +  T +L        +  GK++H  ++  G   ++     ++NMY
Sbjct: 132 RIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191

Query: 184 AKC-------------------------------GQIEEAYKMFDRMPERDLVSWNTIVA 212
           AKC                               GQ++ A   F++M ERD+V+WN++++
Sbjct: 192 AKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251

Query: 213 GFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           G+ Q G+   ALD+ ++M  +     D  T+ S+L A AN+  L IG+ +H + +  GFD
Sbjct: 252 GYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFD 311

Query: 272 SIVNVSTALVDMYAKCGRVETARL---------------------------------VFD 298
               V  AL+ MY++CG VETAR                                  +FD
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFD 371

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +K R+VV+W +MI  Y + G   EA+ +F+ M+ +   P + T+   L   + L  L  
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGH 431

Query: 359 GIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG 415
           G  +H     +K G    VS++N+LI+MY+K   +  A+  F  ++  +  VSW +MI+ 
Sbjct: 432 GKQIHG--SAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIA 489

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            AQ+G   EAL  F  M  + ++PD  T V V  A             HA          
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT-----------HA---------- 528

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELF 530
                         G V   R  FDMM +       ++ +  M+D +G  GL + A E  
Sbjct: 529 --------------GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574

Query: 531 NKMLEGPTKPNDITFLCAISAC 552
            KM   P +P+ +T+   +SAC
Sbjct: 575 EKM---PIEPDVVTWGSLLSAC 593



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 6/176 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L V +SL  L   ++I    +KSG          L++++ K  S++ A+R F+ I  
Sbjct: 417 AAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRC 476

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           + D + + +M+   A+    ++A+     M  + + P    Y  +   C   G + +G++
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536

Query: 160 IHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
               +  V+     L     +V+++ + G ++EA +  ++MP E D+V+W ++++ 
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 254/679 (37%), Positives = 401/679 (59%), Gaps = 6/679 (0%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C   K L++   I   I+  GL +       L++L+   +    A  VF+ I + L
Sbjct: 9   LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68

Query: 103 D-ALYHTMLKGYAK-FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           D  L++ ++    K F  ++    F   + +  + P  + Y  +LK C  +G +  GK +
Sbjct: 69  DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  +I +GF++D+  M+  V MYAKC   E+A K+FD MPERD+ SWN +++ + Q+G  
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E AL+L   M   G + D +T+ +++ + A +  L  GK +H   +R+GF     VS+AL
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMY KCG +E A+ VF+ ++ +NVVSWNSMIA Y   G+ +  + +F++M ++G+ PT 
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   L AC+   +L+ G F+H  + + ++  D+ + +SLI +Y KC  +  A ++F  
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 368

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +    +VSWN MI GY + G   EAL  F  MR   +KPD+ T  SV+PA ++L+V+   
Sbjct: 369 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 428

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +I S  E N  VM AL+DMYAKCGAV  A  +F+ + ER   +W  MI  YG+H
Sbjct: 429 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 488

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A++LF KM +   KP+ +TFL  +SACSH+GLV+EG +YF  +  +YG +P ++H
Sbjct: 489 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEH 548

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           Y  ++DLLGR GRL EA++ +Q+ P I   + +   +  AC +HK ++LGE+    L E 
Sbjct: 549 YSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEK 608

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DPD+   +++L+N+YA+   WD++ KVR  +++ GL+K PGCS +E+   +H F      
Sbjct: 609 DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKS 668

Query: 700 HPQSKRIYTFLETLIDEIK 718
           HPQ+  IY  +  L   ++
Sbjct: 669 HPQADMIYECMSILASHVE 687



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 189/430 (43%), Gaps = 60/430 (13%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L  C D   L++G  +H+ +  L L  ++++  SLI++Y  C     A  +F  ++
Sbjct: 6   LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65

Query: 403 GKTLVS-WNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAELSVIRYA 460
               ++ WN ++    +N    E L  F + +    +KPD+FT  SV+ A + L  + Y 
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H  VI+S F  +V VM++ + MYAKC     A  LFD M ER V +WN +I  Y   
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL-KKDYGIEPVMD 579
           G  + A+ELF +M     KP+ +T    IS+C+    +E G      L +  + ++  + 
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMP---------------------------------- 605
              A+VD+ G+ G L  A +  +++                                   
Sbjct: 246 --SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG 303

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I P +T   ++L AC    N++LG+     +          + + A+I+  +S+ D   K
Sbjct: 304 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR--------NRVEADIFVNSSLIDLYFK 355

Query: 666 VRTIMEKKGL-QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI--DEIKAAGY 722
              I   + + Q  P  ++V     +  +           ++ ++LE L+   +++ AG 
Sbjct: 356 CGNIGSAENVFQNMPKTNVVSWNVMISGYV----------KVGSYLEALVIFTDMRKAGV 405

Query: 723 VPDTNSIHDV 732
            PD  +   V
Sbjct: 406 KPDAITFTSV 415


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/738 (36%), Positives = 416/738 (56%), Gaps = 3/738 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++ ++ K  S  DA +VF+ I  +    +  +++ Y + A   +A+     M   +++  
Sbjct: 8   IIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISID 67

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y  + +L  C  + ++  G+ +  +    GF  D+   T +++++AKCG +EEA  +F 
Sbjct: 68  AYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFR 127

Query: 198 RMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
            M   RD++S   ++  + ++G  +LALD   +M  +G   D  T  +IL A ++   L 
Sbjct: 128 SMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLL 187

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            GK +H + + +     ++V  AL+ MYAKCG ++ ++ +F  M  ++VVSWN+MIAAY 
Sbjct: 188 DGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYT 247

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
             G+ ++A  +F +M   G  P   T    L ACA    LE G  +H  +       D +
Sbjct: 248 LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFA 307

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           M N+LISM+++C  ++ A   F  ++ K L +WN M+  YAQ  +  +AL  +  M  + 
Sbjct: 308 MQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEG 367

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
             PD FT  SV+ + A L  +R  K+IH       FEK+V + TAL++MYAKCG++  A+
Sbjct: 368 FTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAK 427

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             FD ++ + V +W+ MI     HG  + A+EL + M       N++T    + ACSH G
Sbjct: 428 KSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGG 487

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            + EGI YF  L +D+GIE   ++    +DLLGRAG L EA   +  MP +        +
Sbjct: 488 RLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTL 547

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           LG CK+H +V  G+    R+  L+P+  G +VLL N+YAAA  WD +AK+R  M KKG++
Sbjct: 548 LGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVK 607

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK-AAGYVPDTNSI-HDVED 734
           +  GCS +E +++++ F  G T +P++  I   LE L   +K   GYVPDT  + HDV D
Sbjct: 608 RQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSD 667

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E LL  HSEK+A+ FGL+ S PGST+ I KNLRVC DCH   K  S +TGR IIVRD
Sbjct: 668 DKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRD 727

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH F+ G+CSCGDYW
Sbjct: 728 GTRFHHFEGGICSCGDYW 745



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 233/458 (50%), Gaps = 5/458 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D F    ++ MY KC   E+A ++FDR+ +R+  SW+ +V  + QN   + AL++   M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            +    D  T+ S+L A   +  +  G+ V   A   GF+  V V+T+L+ ++AKCG +E
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A  VF  M + R+++S  +MI AYV  G  + A+  + KM  QG+EP   T    L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           +    L  G  +HK + + K   ++S+ N+LI+MY+KC  +  +  +F  +  K +VSWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           AMI  Y   G   +A + F +M +    PD +T  S++ A A    +   + +H  +   
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
            F+++  +   LI M+ +CG++ +AR  F  + ++ +  WN M+  Y     GK A+ L+
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360

Query: 531 -NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
            N +LEG T P+  TF   + +C+  G + EG  +        G E  +    A+V++  
Sbjct: 361 KNMLLEGFT-PDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + G L +A      +     +  + AM+ A   H + E
Sbjct: 419 KCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAE 455



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELR--RILPL-IIKSGLCDQHLFQTKLVSLF 82
           H +    + P  IY   S  +L  C S K L   R+L + I   G       Q  L+S+F
Sbjct: 260 HRMCTLGHTPD-IYTFSS--ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMF 316

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
            +  SL  A R F  I  K    ++TML  YA+F    DA+     M  +   P  + ++
Sbjct: 317 TRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFS 376

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            ++  C  +G +R GK IH      GF  D+   T +VNMYAKCG + +A K FD +  +
Sbjct: 377 SVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK 436

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAV 261
           D+VSW+ ++A  AQ+G AE AL+L   M+ +G   + +T  S+L A ++ G L  G    
Sbjct: 437 DVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF 496

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            G +   G +     +   +D+  + G ++ A  V   M
Sbjct: 497 MGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 535


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 270/775 (34%), Positives = 444/775 (57%), Gaps = 10/775 (1%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP-IPDK 101
           +L+ C + KE R    I  + +K G          L++++ K   L  A  +F+  + +K
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213

Query: 102 LDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            D + +++++  +       +A+S   RM+   V    Y +   L+ C     I+ G+ I
Sbjct: 214 DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGI 273

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++ +    D++    ++ MYA CGQ+E+A ++F  M  +D VSWNT+++G  QN   
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY 333

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A++    M + G++ D +++++++ A     +L  G  VH YA++ G DS +++  +L
Sbjct: 334 SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSL 393

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMY KC  V+     F+ M  ++++SW ++IA Y +     +A+ + +K+  + ++   
Sbjct: 394 IDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP 453

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLG-TDVSMTNSLISMYSKCKKVDRAADIFS 399
           + I   L AC+ L   +    +H  +  LK G  D+ + N+++++Y +   VD A  +F 
Sbjct: 454 MMIGSILLACSGLKSEKLIKEIHGYV--LKGGLADILIQNAIVNVYGELALVDYARHVFE 511

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +  K +VSW +MI     NG   EAL  F  +   NI+PD  T+VSV+ A A LS ++ 
Sbjct: 512 SINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKK 571

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            K IH  +IR  F     +  +L+DMYA+CG +  AR +F+ + +R +  W  MI+  G 
Sbjct: 572 GKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGM 631

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG GK A++LF+KM +    P+ ITFL  + ACSHSGLV EG  +F  +K +Y +EP  +
Sbjct: 632 HGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPE 691

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  +VDLL R+  L EA+ F++ MPIEP   V+ A+LGAC+IH N +LGE AA +L +L
Sbjct: 692 HYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQL 751

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           + +  G +VL++N +AA   W+ + +VR+IM+   L+K PGCS +E++N++H+F +    
Sbjct: 752 NTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKS 811

Query: 700 HPQSKRIYTFLETLIDEIK-AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
           HPQ   IY  L      +K   GY   T  + HDV +  +  +L  HSE+LA+ +GLL +
Sbjct: 812 HPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVT 871

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S G+ + I KNLR+C DCH   K  S ++ R ++VRD  RFH F+ G+CSCGD+W
Sbjct: 872 SKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 175/620 (28%), Positives = 303/620 (48%), Gaps = 28/620 (4%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL----IIKSG 67
           FT+  PT T    +   SQ                LE+C S K L +   L    +    
Sbjct: 33  FTDPLPTTTRFPLQQAYSQA---------------LELCASHKALPQGQQLHAHFLKTQN 77

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
             D     TK V ++ K  S  DA +VF+ + ++    ++ M+          +A+    
Sbjct: 78  YLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYK 137

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
            MR   V+   + +  +LK CG   E R G EIHG  +  G+   +F    ++ MYAKCG
Sbjct: 138 EMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCG 197

Query: 188 QIEEAYKMFDR--MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
            +  A  +FD   M + D VSWN+I++     G +  AL L  RM E G   +  T VS 
Sbjct: 198 DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSA 257

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A      ++IG+ +H   +++   + V VS AL+ MYA CG++E A  VF  M  ++ 
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN++++  V+     +A+  FQ M D G +P  V+++  + A     +L  G+ VH  
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +  + +++ + NSLI MY KC  V      F  +  K L+SW  +I GYAQN    +A
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA 437

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           LN   K++ + +  D   + S++ A + L   +  K IH  V++     ++ +  A++++
Sbjct: 438 LNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNV 496

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y +   V  AR +F+ +N + + +W  MI     +GL   A+ELFN ++E   +P+ IT 
Sbjct: 497 YGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITL 556

Query: 546 LCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           +  + A +    +++G  IH F  ++K + +E ++ +  ++VD+  R G +  A +    
Sbjct: 557 VSVLYAAAALSSLKKGKEIHGFL-IRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNY 613

Query: 604 MPIEPGITVFGAMLGACKIH 623
           +  +  + ++ +M+ A  +H
Sbjct: 614 VK-QRDLILWTSMINANGMH 632


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/675 (38%), Positives = 413/675 (61%), Gaps = 6/675 (0%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ L++ C  +  I    +I    +  GF   L     +++ Y KCG +  A K+FD +P
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R +V+WN+++A + +NG ++ A+D+  RM  +G   D  T  S+  A +++G +  G+ 
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 261 VHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            HG ++  G   S V V +ALVDMYAK G++  ARLV D +  ++VV + ++I  Y   G
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              E++++F+ M  +G+E    T+   L  C +L DL  G  +H L+ +  L + V+   
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL++MY +C  VD +  +F +      V+W ++I+G  QNGR   AL  F +M   +I P
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +SFT+ SV+ A + L+++   K IHA+V++   + + +V  ALID Y KCG+   AR++F
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           + + E  V + N MI  Y  +G G  A++LF+ M +   +PN++T+L  +SAC+++GL+E
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 497

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG H F+S +    IE   DHY  MVDLLGRAGRL EA   I ++ I   + ++  +L A
Sbjct: 498 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISD-VVIWRTLLSA 556

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C+IH +VE+ ++  NR+ +L P++GG HVLL+N+YA+   W K+ ++++ M +  L+K P
Sbjct: 557 CRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNP 616

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
             S V+++ E+H+F +G   HP  + I   LE LI+++K  GYVPDT  +  D+++  + 
Sbjct: 617 AMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKI 676

Query: 739 NLLSSHSEKLAIAFGLLNSS-PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             L  HSEKLA+AF L  S+   +TI I KNLRVCGDCH   K++S + GR+II RD+ R
Sbjct: 677 RSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKR 736

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG+CSCGDYW
Sbjct: 737 FHHFRNGLCSCGDYW 751



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 250/495 (50%), Gaps = 7/495 (1%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L++ C  +K   ++ +I    +K G    H    KL+  + K  S+  A +VF+ +P + 
Sbjct: 83  LIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRH 140

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++M+  Y +     +A+    RM  D + P  + ++ + K   D+G +  G+  HG
Sbjct: 141 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200

Query: 163 QLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           Q +V G  + ++F  + +V+MYAK G++ +A  + D++  +D+V +  ++ G++ +G   
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            +L +   M ++G   +  T+ S+L    N+  L  G+ +HG  ++AG +S V   T+L+
Sbjct: 261 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLL 320

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY +CG V+ +  VF    + N V+W S+I   V+ G  E A+  F++ML   + P + 
Sbjct: 321 TMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 380

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L AC+ L  LE+G  +H ++ +  L  D  +  +LI  Y KC   + A  +F+ L
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 440

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +VS N+MI  YAQNG  +EAL  F  M+   ++P++ T + V+ A     ++    
Sbjct: 441 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 500

Query: 462 WIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
            I +    S   E        ++D+  + G +  A  L + +N   V  W  ++     H
Sbjct: 501 HIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIH 560

Query: 521 GLGKAAVELFNKMLE 535
           G  + A  + N++++
Sbjct: 561 GDVEMAKRVMNRVID 575



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 184/374 (49%), Gaps = 21/374 (5%)

Query: 9   LSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIK 65
           L VF N T  + +  +++TLS                +L  C +L++L   R I  LI+K
Sbjct: 263 LQVFRNMTK-KGIEANEYTLSS---------------VLVCCGNLEDLTSGRLIHGLIVK 306

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           +GL      QT L++++ +   + D+ +VF+   +     + +++ G  +    + A+  
Sbjct: 307 AGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLK 366

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
             +M    + P  +  + +L+ C  +  + +GK+IH  ++  G  +D +    +++ Y K
Sbjct: 367 FRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGK 426

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG  E A  +F+ + E D+VS N+++  +AQNGF   AL L + M + G   + +T + +
Sbjct: 427 CGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGV 486

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA-LVDMYAKCGRVETARLVFDGMKSRN 304
           L A  N G L  G  +   A  +G   +     A +VD+  + GR++ A ++ + +   +
Sbjct: 487 LSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISD 546

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VV W ++++A    G+ E A R+  +++D   E     ++ + +  A  G+  + I +  
Sbjct: 547 VVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLS-NLYASTGNWSKVIEMKS 605

Query: 365 LLDQLKLGTDVSMT 378
            + +++L  + +M+
Sbjct: 606 AMREMRLKKNPAMS 619


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/738 (36%), Positives = 412/738 (55%), Gaps = 69/738 (9%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           +Y  +  G  G +R  + +  ++ +     ++F    +++M+AK G++ +A  +F  MPE
Sbjct: 69  SYYGETAGGAGGLRDARRLFDEIPLA--RRNVFTWNSLLSMFAKSGRLADARGVFAEMPE 126

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           RD VSW  +V G  + G    A+  +  M  +G      T+ ++L + A   +  +G+ V
Sbjct: 127 RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKV 186

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD----------------------- 298
           H + ++ G  S V V+ ++++MY KCG  ETA  VF+                       
Sbjct: 187 HSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRM 246

Query: 299 --------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHA 349
                    M  R++VSWN+MIA Y + G   +A+++F +ML +  + P   TI   L A
Sbjct: 247 DLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 306

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA-------------- 395
           CA+LG++  G  VH  + + ++  +  +TN+LIS Y+K   V+ A               
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366

Query: 396 -------------------DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
                              ++F  +  + +V+W AMI+GY QNGR +EA++ F  M +  
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            +P+S+T+ +V+   A L+ + Y K IH   IRS  E++  V  A+I MYA+ G+   AR
Sbjct: 427 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWAR 486

Query: 497 ALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
            +FD +  R  T TW  MI     HG G+ AV LF +ML    +P+ IT++  +SACSH+
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 546

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G V EG  Y+  +K ++ I P M HY  MVDLL RAG  +EA +FI++MP+EP    +G+
Sbjct: 547 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC++HKN EL E AA +L  +DP+  G +  +AN+Y+A   W   A++    ++K +
Sbjct: 607 LLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 666

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +K  G S   +++++H F +    HPQ   +Y     + +EIK AG+VPD  S+ HDV+D
Sbjct: 667 RKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDD 726

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
            ++E LLS HSEKLAIAFGL+++   +T+ + KNLRVC DCH A K IS VT REIIVRD
Sbjct: 727 ELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRD 786

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH F++G+CSC DYW
Sbjct: 787 ATRFHHFRDGLCSCKDYW 804



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 248/572 (43%), Gaps = 113/572 (19%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           L++ RR+   I    L  +++F    L+S+F K   L+DA  VF  +P++    +  M+ 
Sbjct: 81  LRDARRLFDEI---PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G  +     +A+  L+ M  D   P  +  T +L  C        G+++H  ++  G   
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDR-------------------------------MP 200
            +     V+NMY KCG  E A  +F+R                               MP
Sbjct: 198 CVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGK 259
           +R +VSWN ++AG+ QNG    AL L +RM HE     D  TI S+L A AN+G++RIGK
Sbjct: 258 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG-------------------- 299
            VH Y +R        V+ AL+  YAK G VE AR + D                     
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377

Query: 300 -------------MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
                        M +R+VV+W +MI  Y + G  +EA+ +F+ M+  G EP + T+   
Sbjct: 378 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAV 437

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKT 405
           L  CA L  L+ G  +H    +  L    S++N++I+MY++      A  +F ++   K 
Sbjct: 438 LSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKE 497

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            ++W +MI+  AQ+G+  EA+  F +M    ++PD  T V V+ A +           HA
Sbjct: 498 TITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACS-----------HA 546

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTH 520
                                   G V   +  +D +   H     ++ +  M+D     
Sbjct: 547 ------------------------GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 582

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           GL   A E   +M   P +P+ I +   +SAC
Sbjct: 583 GLFSEAQEFIRRM---PVEPDAIAWGSLLSAC 611


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 283/771 (36%), Positives = 430/771 (55%), Gaps = 18/771 (2%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L+E RRI  ++  + +   H   T L+ ++ K +S+ DA +VF+ I  K    ++ M+  
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI--------HGQL 164
           YA+    + A+     M  + V      +  +L  C  + ++   K +        H  L
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
             + F+      T +VN Y  CG +E+A++ F R    +L+    ++  + Q    + AL
Sbjct: 236 HDSSFA------TALVNFYGSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEAL 288

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +L   M  EG + D I  +++L A +    L  G+ +HG+     FD  VN   AL++MY
Sbjct: 289 ELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMY 348

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG +E A  VF  M+ R+V+SWN++IAA+ +     EA+ +   M   GV+   ++ +
Sbjct: 349 GKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFV 408

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            AL  CA    L +G  +H  + +  +  DV + N+++ MY  CK  D A+ +F  ++ +
Sbjct: 409 NALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR 468

Query: 405 TLVSWNAMILGYAQNGRV-NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
             VSWNAMI  YA   R+ +EAL  F +M+     PD  + V+ + A A  + +   K +
Sbjct: 469 DQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLL 528

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  +  +  E N+ V  A+++MYAK G +  AR +F  M    V +WN MI  +  HG  
Sbjct: 529 HDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHA 588

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY-GIEPVMDHYG 582
              +  F +M      PND+TF+  +SACSH GLV++G+  F SL  D+  I P  +HY 
Sbjct: 589 DQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY 648

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL+ RAG+L+ A  FI   P++P   +   MLGA K+HK+VE   K+A  L EL PD
Sbjct: 649 CMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPD 708

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +V+L+N+Y      D+ AK+R +M +K ++K P  S + +K  VH F++G T + +
Sbjct: 709 RSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNAR 768

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +  I   LE L  E+  AGY PDT   +HDV D  ++ LLS HSEKLAIAFGL++++PG+
Sbjct: 769 TPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGT 828

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++ I KNLRVCGDCH ATK+IS +TGREI+VRD HRFH F NG CSCGDYW
Sbjct: 829 SLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 244/484 (50%), Gaps = 10/484 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL V  D   +  GKE+H ++  +      F    +V MY  CG + +A   FDRMP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-ANVGSLRIGK 259
            +D ++W  ++    Q G +E AL L   M  EG        V++L A  A+   L  G+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HG       +S   VST L+ MY KC  VE AR VFDG++ + VV WN+MI AY +  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSM 377
           + E+A+++F  ML +GV+   +T +  L AC+ L DLE    V   +++ +     D S 
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L++ Y  C  +++A   FS+ + + +++  AMI  Y Q  R +EAL  F  M  + +
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           K D    ++V+ A +    +   + IH  +    F+++V    ALI+MY KCG++  A  
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  M  R V +WN +I  +G H     A+ L + M     K + I+F+ A+  C+ S  
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEA 419

Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           + +G  IH +     + GI+  +    A++D+ G     ++A    + M +   ++ + A
Sbjct: 420 LAKGRMIHSWIV---ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WNA 475

Query: 616 MLGA 619
           M+ A
Sbjct: 476 MITA 479



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 8/254 (3%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L +C + + L   R I   I++SG+    +    ++ ++    S  DA+RVF  +  +  
Sbjct: 411 LPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQ 470

Query: 104 ALYHTMLKGYAKFASL-DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             ++ M+  YA    L  +A+    +M+     P V ++   L  C     +  GK +H 
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD 530

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   G   ++     V+NMYAK G +  A KMF +MP  D++SWN +++ FAQ+G A+ 
Sbjct: 531 RIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQ 590

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST---A 279
            L    RM+ EG+  + +T VS++ A ++ G ++ G  +   ++   F +I   +     
Sbjct: 591 VLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLF-VSLLHDFPTISPRAEHYYC 649

Query: 280 LVDMYAKCGRVETA 293
           +VD+ A+ G+++ A
Sbjct: 650 MVDLIARAGKLDAA 663


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/607 (40%), Positives = 365/607 (60%), Gaps = 1/607 (0%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           +NT++ G         A+ L   MH+     D  T   +L A A +    +G  +H    
Sbjct: 72  YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           + GFD  V V T +V  Y+KCG +  A  VFD M  +NVVSW  MI   +E G   EA+ 
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F+ +L+ G+ P    I+  L ACA LGDLE G ++ + + +  L  +V +  SL+ MY+
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  ++ A  +F  +  K +V W+AMI GYA NG   EA+  F +MR  N++PD + MV 
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
            + + A L  +    W   L+    F  N  + T+LID YAKCG++  A  ++ MM E+ 
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
              +N +I G   +G   AA  +F +M +    PN+ TF+  +  C+H+GLV++G HYF 
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           S+  D+ + P ++HYG MVDLL RAG L+EA + I+ MP++  + V+G++LG C++H+  
Sbjct: 432 SMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRET 491

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           +L E    +L EL+P   G++VLL+NIY+A+  WD+  K+R+ + +KG+QK PG S VE+
Sbjct: 492 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEV 551

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHS 745
              VH F  G T HP S++IY  LE+L  ++K AGY P T  +  DVE+  +E+ L  HS
Sbjct: 552 DGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHS 611

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           EKLA+AF L+++     I + KNLRVCGDCH A K+IS VTGREI++RD +RFHCF +G 
Sbjct: 612 EKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGA 671

Query: 806 CSCGDYW 812
           CSC DYW
Sbjct: 672 CSCRDYW 678



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 221/445 (49%), Gaps = 3/445 (0%)

Query: 94  VFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           VF   P   +  LY+TM++G       ++AV     M    + P  + ++++LK C  + 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
               G  IH  +   GF  D+F  T VV  Y+KCG + +A+K+FD M  +++VSW  ++ 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G  + G    A+DL   + E G R D   IV +L A A +G L  G+ +       G   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V V+T+LVDMY KCG +E AR VFDGM  +++V W++MI  Y   G P EA+ +F +M 
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
              V P    ++ AL +CA LG LE G +   L++  +  ++  +  SLI  Y+KC  ++
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  ++  ++ K  V +NA+I G A  G+V  A   F +M    I P+  T V ++    
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418

Query: 453 ELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTW 510
              ++   + + +++         +     ++D+ A+ G +  A  L   M  + +V  W
Sbjct: 419 HAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLE 535
             ++ G   H   + A  +  +++E
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQLIE 503



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 8/351 (2%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N   +N+MI   V       A+ ++  M    + P + T    L ACA L     G+ +H
Sbjct: 68  NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L+ +     DV +  +++  YSKC  +  A  +F  +  K +VSW  MI G  + G+  
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EA++ F  +    ++PD F +V V+ A A L  +   +WI   +      +NVFV T+L+
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMY KCG++  AR +FD M E+ +  W+ MI GY ++GL + A+ELF +M +   +P+  
Sbjct: 248 DMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLK--KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             + A+S+C+  G +E G ++   L   +++   PV+    +++D   + G + EA   +
Sbjct: 308 AMVGALSSCASLGALELG-NWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALG-V 363

Query: 602 QKMPIEPGITVFGAMLGACKIHKNV--ELGEKAANRLFELDPDEGGYHVLL 650
            KM  E    VF A++    ++  V    G       F + P+E  +  LL
Sbjct: 364 YKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 7/378 (1%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           + +L+ C  L        I  L+ K+G  CD  + +T +V  + K   L DA +VF+ + 
Sbjct: 108 SFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFV-KTNVVCFYSKCGFLRDAWKVFDDMV 166

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    +  M+ G  +F    +AV     +    + P  +    +L+ C  +G++  G+ 
Sbjct: 167 VKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRW 226

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           I   +   G S ++F  T +V+MY KCG +EEA  +FD M E+D+V W+ ++ G+A NG 
Sbjct: 227 IDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGL 286

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
              A++L   M +   R D   +V  L + A++G+L +G    G      F S   + T+
Sbjct: 287 PREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTS 346

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D YAKCG +E A  V+  MK ++ V +N++I+     G    A  +F +M   G+ P 
Sbjct: 347 LIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPN 406

Query: 340 NVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             T +  L  C   G ++ G  + + +     +   +     ++ + ++   +D A ++ 
Sbjct: 407 EHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLI 466

Query: 399 SKLQGK-TLVSWNAMILG 415
             +  K  ++ W +++ G
Sbjct: 467 KGMPMKANVIVWGSLLGG 484


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/759 (35%), Positives = 437/759 (57%), Gaps = 8/759 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L++K+GL +       LVS +  +  ++DA ++F+ +P++    +++M++ ++     ++
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271

Query: 122 AVSFLIRMRYDD----VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           +   L  M  ++      P V     +L VC    EI  GK +HG  +      +L    
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN 331

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-- 235
            +++MY+KCG I  A  +F     +++VSWNT+V GF+  G      D++ +M   G   
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           + D +TI++ +P   +   L   K +H Y+++  F     V+ A V  YAKCG +  A+ 
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF G++S+ V SWN++I  + +  +P  ++    +M   G+ P + T+   L AC+ L  
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L  G  VH  + +  L  D+ +  S++S+Y  C ++     +F  ++ K+LVSWN +I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y QNG  + AL  F +M    I+    +M+ V  A + L  +R  +  HA  ++   E +
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            F+  +LIDMYAK G++  +  +F+ + E+   +WN MI GYG HGL K A++LF +M  
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 691

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
               P+D+TFL  ++AC+HSGL+ EG+ Y   +K  +G++P + HY  ++D+LGRAG+L+
Sbjct: 692 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 751

Query: 596 EAWDFI-QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           +A   + ++M  E  + ++ ++L +C+IH+N+E+GEK A +LFEL+P++   +VLL+N+Y
Sbjct: 752 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           A    W+ + KVR  M +  L+K  GCS +EL  +V SF  G       + I +    L 
Sbjct: 812 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE 871

Query: 715 DEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
            +I   GY PDT S+ HD+ +  +   L  HSEKLA+ +GL+ +S G+TI + KNLR+C 
Sbjct: 872 MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICV 931

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCHNA K IS V  REI+VRD  RFH FKNGVCSCGDYW
Sbjct: 932 DCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 287/527 (54%), Gaps = 11/527 (2%)

Query: 38  IYRHPSALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAAR 93
           + R    LLL+     K++   R+I  L+  S  L +  +  T++++++    S  D+  
Sbjct: 82  LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVG 152
           VF+ +  K    ++ ++  Y++    D+ +   I M    D+ P  + Y  ++K C  + 
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           ++  G  +HG ++  G   D+F    +V+ Y   G + +A ++FD MPER+LVSWN+++ 
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRA 268
            F+ NGF+E +  L+  M EE   G F+    T+V++LP  A    + +GK VHG+A++ 
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
             D  + ++ AL+DMY+KCG +  A+++F    ++NVVSWN+M+  +   G+      + 
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381

Query: 329 QKMLDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           ++ML  G  V+   VTI+ A+  C     L     +H    + +   +  + N+ ++ Y+
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  +  A  +F  ++ KT+ SWNA+I G+AQ+     +L+   +M+   + PDSFT+ S
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           ++ A ++L  +R  K +H  +IR+  E+++FV  +++ +Y  CG + T +ALFD M ++ 
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           + +WN +I GY  +G    A+ +F +M+    +   I+ +    ACS
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 3/164 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL+  R      +K  L D       L+ ++ K  S++ +++VF  + +K  A ++ M+ 
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFS 170
           GY       +A+     M+     P    +  +L  C   G I  G     Q+  + G  
Sbjct: 672 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMF--DRMPERDLVSWNTIVA 212
            +L     V++M  + GQ+++A ++   +   E D+  W ++++
Sbjct: 732 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/743 (35%), Positives = 428/743 (57%), Gaps = 31/743 (4%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++   N L D+ R+F  +       + ++++ Y        ++   I M    + P    
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE-------AY 193
           +  +LK C  + ++  G+ +HG +I  G   DL+    ++NMY+K   +++       A 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 194 KMFDRMPERDL-VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           ++ D M ER   V   +++ G      +++                F   VS        
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEA--------------FNYDVSCRSREFEA 216

Query: 253 GSLRIGKAVHGYAMRAGFDSI--VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
             L I      Y  R+ +  +   N+   + D+ +    V++ R +F+ M  +++VSWN+
Sbjct: 217 QVLEID-----YKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNT 270

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +IA     G   E + + ++M    ++P + T+   L   A+  D+ +G  +H    +  
Sbjct: 271 IIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQG 330

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L  +V + +SLI MY+KC +V  +  +F+ L  +  +SWN++I G  QNG  +E L +F 
Sbjct: 331 LDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFR 390

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           +M    IKP S++  S++PA A L+ +   K +H  + R+ F++N+F+ ++L+DMYAKCG
Sbjct: 391 QMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCG 450

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            + TAR +FD M  R + +W  MI G   HG    A+ELF +M     +PN + F+  ++
Sbjct: 451 NIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLT 510

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSH+GLV+E   YF S+  D+GI P ++HY A+ DLLGRAGRL EA+DFI  MPI P  
Sbjct: 511 ACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTG 570

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
           +V+  +L AC++HKNV++ EK ANR+ E+DP   G ++LLANIY+AA  W + AK R  +
Sbjct: 571 SVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASL 630

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
            + G++KTP CS +E++N+V++F +G   HP  ++I   +E L++ ++  GYVPDT+ + 
Sbjct: 631 RRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVH 690

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           HDVE+  ++ L+ SHSE+LAI FG++N+  G+TI + KNLRVC DCH ATK+IS + GRE
Sbjct: 691 HDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGRE 750

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           I+VRD  RFH FKNG CSCGDYW
Sbjct: 751 IVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 145/280 (51%), Gaps = 4/280 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I+ GL  +    + L+ ++ K   + D+ RVF  + ++    +++++ G  +    D+ +
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  +M    + P  Y+++ ++  C  +  +  GK++HG +  NGF  ++F  + +V+MY
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A ++FDRM  RD+VSW  ++ G A +G A  A++L  +M  EG   +++  +
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506

Query: 244 SILPAVANVGSL-RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           ++L A ++ G +    K  +   +  G    V    A+ D+  + GR+E A     GM  
Sbjct: 507 AVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPI 566

Query: 303 RNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
               S W ++++A     N + A ++  ++L+  V+P N 
Sbjct: 567 GPTGSVWATLLSACRVHKNVDMAEKVANRILE--VDPKNT 604



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/210 (18%), Positives = 90/210 (42%), Gaps = 7/210 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  C  L  L   +++   I ++G  +     + LV ++ K  ++  A ++F+ +  + 
Sbjct: 407 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRD 466

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ G A      DA+    +M+ + + P    +  +L  C   G +    +   
Sbjct: 467 MVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFN 526

Query: 163 QLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAGFAQNGFA 220
            + ++ G +  +     V ++  + G++EEAY     MP     S W T+++    +   
Sbjct: 527 SMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNV 586

Query: 221 ELALDLVTRMHEEGRR--GDFITIVSILPA 248
           ++A  +  R+ E   +  G +I + +I  A
Sbjct: 587 DMAEKVANRILEVDPKNTGAYILLANIYSA 616


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/624 (39%), Positives = 388/624 (62%), Gaps = 3/624 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR-GDFITIVSILPAVA 250
           AY +F      D+++WN+++  F  +     AL   T M E  R   D  T  S+L   A
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            +   ++GK +HG  ++    S + + T L++MYA CG +++AR +F+ M  RN V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MI+ Y++   P EA+ +++KM + G  P  VT+   + ACA+L DL  G+ +H  + ++ 
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +     + ++L++MY+KC  +  A  +F +L  K + +W+A+I GY +N R  EAL  F 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 431 KMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           ++    N++P+  T+++VI A A+L  +   +W+H  + R+    +V +  +LIDM++KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A+ +FD M+ + + +WN M++G   HGLG+ A+  F+ M     +P++ITF+  +
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +ACSH+GLV+EG   F  ++  YG+    +HYG MVDLL RAG L EA +FI+ MP++P 
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             ++G+MLGAC+++ N+ELGE+AA  L EL+P   G ++LL+NIYA   MW+++ KVR +
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVREL 510

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M +KG+QKTPGCS V + N  HSF +G   HP+   I   L  + +++K  GYV DT+ +
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEV 570

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
             +++D  +E  +S HSEKLA+ +GLL S  G  I I KNLRVC DCH   K +S +  R
Sbjct: 571 LLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQR 630

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           +I +RD +RFH FK+G CSC DYW
Sbjct: 631 QITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 192/327 (58%), Gaps = 1/327 (0%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + +  LLK C  + E + GK +HGQ++      DL+  T ++NMYA CG ++ A  +
Sbjct: 77  PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+RM  R+ V W ++++G+ +N     AL L  +M E+G   D +T+ +++ A A +  L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G  +H +           + +ALV+MYAKCG ++TAR VFD +  ++V +W+++I  Y
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGY 256

Query: 316 VEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           V+     EA+++F+++     + P  VTI+  + ACA LGDLE G +VH  + + + G  
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS+ NSLI M+SKC  +D A  IF  +  K L+SWN+M+ G A +G   EAL  F  M++
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQT 376

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAK 461
            +++PD  T + V+ A +   +++  K
Sbjct: 377 TDLQPDEITFIGVLTACSHAGLVQEGK 403



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 183/356 (51%), Gaps = 8/356 (2%)

Query: 9   LSVFTNST-PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR--RIL-PLII 64
           L  F NS  P + L  +   L +   +P R +  PS  LL+ C  L E +  ++L   ++
Sbjct: 50  LRAFVNSNMPRRALQSYTEMLERSRNVPDR-FTFPS--LLKGCALLLEFKVGKVLHGQVV 106

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K  L      +T L++++     L  A  +FE +  +   ++ +M+ GY K    ++A+ 
Sbjct: 107 KYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALL 166

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
              +M  D  +P       L+  C ++ ++  G ++H  +      +     + +VNMYA
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYA 226

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRGDFITIV 243
           KCG ++ A ++FD++ ++D+ +W+ ++ G+ +N  +  AL L   +      R + +TI+
Sbjct: 227 KCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTIL 286

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +++ A A +G L  G+ VH Y  R      V+++ +L+DM++KCG ++ A+ +FD M  +
Sbjct: 287 AVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK 346

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +++SWNSM+      G   EA+  F  M    ++P  +T +  L AC+  G ++ G
Sbjct: 347 DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVI 448
           V  A  +F+  +   +++WN+M+  +  +     AL  + +M  RS+N+ PD FT  S++
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV-PDRFTFPSLL 86

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              A L   +  K +H  V++     ++++ T L++MYA CG + +AR LF+ M  R+  
Sbjct: 87  KGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKV 146

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            W  MI GY  +     A+ L+ KM E    P+++T    +SAC+    +  G+   + +
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206

Query: 569 KK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           ++ D  I  V+    A+V++  + G L  A     ++  +        + G  K +++ E
Sbjct: 207 REMDMKICAVLG--SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 628 LGEKAANRLFE-------LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
                A +LF        + P+E     +LA I A A + D L   R + +   + +T  
Sbjct: 265 -----ALQLFREVAGGSNMRPNEV---TILAVISACAQLGD-LETGRWVHDY--ITRTQK 313

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIY 707
              V L N +   +S       +KRI+
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIF 340


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/688 (37%), Positives = 409/688 (59%), Gaps = 7/688 (1%)

Query: 127  IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
            + + YD V  +V     +L       ++  GK++HG  + +G   D+     +VNMY+K 
Sbjct: 898  LNIDYDAVTLLV-----VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 952

Query: 187  GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
            G    A ++F+ M   DL+SWN++++  AQ+   E +++L   +  EG + D  T+ S+L
Sbjct: 953  GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVL 1012

Query: 247  PAVAN-VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
             A ++ +  L I + +H +A++ G  +   V+T L+D+Y+K G++E A  +F      ++
Sbjct: 1013 RACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDL 1072

Query: 306  VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
              WN+M+  Y+ G + ++A+ +F  +   G +   +T+  A  AC  L  L++G  +H  
Sbjct: 1073 ACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAH 1132

Query: 366  LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
              +    +D+ + + ++ MY KC  +  A  +F+ +     V+W +MI G   NG  ++A
Sbjct: 1133 AIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQA 1192

Query: 426  LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
            L  + +MR   + PD +T  ++I A + ++ +   + +HA VI+     + FV T+L+DM
Sbjct: 1193 LRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDM 1252

Query: 486  YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
            YAKCG +  A  LF  MN R++  WN M+ G   HG  + AV LF  M     +P+ ++F
Sbjct: 1253 YAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSF 1312

Query: 546  LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
            +  +SACSH+GL  E   Y  S+  DYGIEP ++HY  +VD LGRAG + EA   I+ MP
Sbjct: 1313 IGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 1372

Query: 606  IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
             +   ++  A+LGAC+I  +VE G++ A RLF L+P +   +VLL+NIYAAA+ WD +  
Sbjct: 1373 FKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 1432

Query: 666  VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
             R +M++K ++K PG S +++KN +H F      HPQ+  IY  +E ++  I+  GYVPD
Sbjct: 1433 ARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 1492

Query: 726  TNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
            T  +  DVED  +E  L  HSEKLAIA+GL+++   +TI + KNLRVCGDCHNA KYIS 
Sbjct: 1493 TEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISK 1552

Query: 785  VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            V  REI++RD +RFH F++GVCSCGDYW
Sbjct: 1553 VFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 248/526 (47%), Gaps = 45/526 (8%)

Query: 45   LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
            LLL  CT  +        I+ SG    H     L++++ K  SLS A +VF+  P++   
Sbjct: 637  LLLGKCTHAR--------IVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLV 688

Query: 105  LYHTMLKGYAKFASLDDAVS----FLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
             ++ +L  YA     +D  +     L R+ R    +        +LK+C + G +   + 
Sbjct: 689  TWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG 748

Query: 160  IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            +HG  I  G   D+F    +VN+Y+KCG++ +A  +FD M ERD+V WN ++ G+ Q G 
Sbjct: 749  VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808

Query: 220  AELALDLVTRMHEEGRRGDFITIVSILPAVANVG---SLRIGKAVHGYAMRAGFDSIVNV 276
             + A  L +  H  G R D  ++  IL  V+ V       +   V  YA +         
Sbjct: 809  EKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSD---- 864

Query: 277  STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
                                     + +V  WN  ++  +  G+   A+  F  M    +
Sbjct: 865  ------------------------DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNI 900

Query: 337  EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            +   VT++  L A A   DLE G  VH +  +  L +DVS+ NSL++MYSK      A +
Sbjct: 901  DYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960

Query: 397  IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL-S 455
            +F+ ++   L+SWN+MI   AQ+    E++N F  +  + +KPD FT+ SV+ A + L  
Sbjct: 961  VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020

Query: 456  VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             +  ++ IH   +++    + FV T LID+Y+K G +  A  LF   ++  +  WN M+ 
Sbjct: 1021 GLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMF 1080

Query: 516  GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
            GY     GK A+ELF+ + +   K + IT   A  AC    L+++G
Sbjct: 1081 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG 1126



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 238/484 (49%), Gaps = 41/484 (8%)

Query: 144  LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
            LL+       +  GK  H +++V+G + D F    ++ MY+KCG +  A ++FD  PERD
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 204  LVSWNTIVAGFA-----QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
            LV+WN I+  +A      +G A+  L L   +         +T+  +L    N G L   
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 259  KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
            + VHGYA++ G +  V VS ALV++Y+KCGR+  ARL+FD M+ R+VV WN M+  YV+ 
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 319  GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            G  +EA ++F +    G+ P   ++   L+  +++ + + G +   L DQ++        
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKW---LADQVQ-------- 854

Query: 379  NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
                +  +K    D   D+F          WN  +      G    A+  F  M   NI 
Sbjct: 855  ----AYAAKLSLSDDNPDVF---------CWNKKLSECLWAGDNWGAIECFVNMNGLNID 901

Query: 439  PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
             D+ T++ V+ A+A    +   K +H + ++S  + +V V  +L++MY+K G    AR +
Sbjct: 902  YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961

Query: 499  FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SG 556
            F+ M    + +WN MI       L + +V LF  +L    KP+  T    + ACS    G
Sbjct: 962  FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG 1021

Query: 557  L-VEEGIHYFTSLKKDYGIEPVMDHYGA--MVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
            L +   IH   +LK       + D + A  ++D+  ++G++ EA +F+ +   +  +  +
Sbjct: 1022 LNISRQIHVH-ALKTG----NIADSFVATTLIDVYSKSGKMEEA-EFLFQNKDDLDLACW 1075

Query: 614  GAML 617
             AM+
Sbjct: 1076 NAMM 1079



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 4/288 (1%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            L + ++I    IK+G        + ++ ++ K   + +A  VF  I    D  + +M+ G
Sbjct: 1123 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 1182

Query: 113  YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
                 + D A+    RMR   V P  Y +  L+K    V  + +G+++H  +I      D
Sbjct: 1183 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD 1242

Query: 173  LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
             F  T +V+MYAKCG IE+AY++F +M  R++  WN ++ G AQ+G AE A++L   M  
Sbjct: 1243 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 1302

Query: 233  EGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G   D ++ + IL A ++ G +    + +H      G +  +   + LVD   + G V+
Sbjct: 1303 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 1362

Query: 292  TARLVFDGMKSRNVVSWN-SMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
             A  V + M  +   S N +++ A    G+ E   R+  ++    +EP
Sbjct: 1363 EADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF--ALEP 1408



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 3/190 (1%)

Query: 26   HTLSQRAYIPSRIYRHPSALLLEVC-TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
            H + Q   +P   Y   + +    C T+L++ R++   +IK          T LV ++ K
Sbjct: 1197 HRMRQSRVMPDE-YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 1255

Query: 85   YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              ++ DA R+F+ +  +  AL++ ML G A+  + ++AV+    M+   + P   ++  +
Sbjct: 1256 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 1315

Query: 145  LKVCGDVGEIRRGKE-IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
            L  C   G      E +H      G   ++   + +V+   + G ++EA K+ + MP + 
Sbjct: 1316 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 1375

Query: 204  LVSWNTIVAG 213
              S N  + G
Sbjct: 1376 SASINRALLG 1385


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/674 (39%), Positives = 391/674 (58%), Gaps = 39/674 (5%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY +LL+ C     +   K+IH   + N  + D   +  +  +Y  C Q+  A ++FD +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P   ++ WN I+  +A NG  + A+DL   M   G R +  T   +L A + + ++  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H +A   G +S V V TALVD YAKCG +  A+ +F  M  R+VV+WN+MIA     G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             ++A+++  +M ++G+ P + TI+  L  C  L                          
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL-------------------------- 223

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
               +Y++         IF  +  +  VSW+AMI GY  +  + EAL+ F  M+   I P
Sbjct: 224 ----LYAR--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDP 271

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  TM+ V+PA + L+ +++    H  +I   F  +  +  ALIDMY+KCG +  AR +F
Sbjct: 272 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 331

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           + M+   + +WN MI GYG HGLG  A+ LF+ +L    KP+DITF+C +S+CSHSGLV 
Sbjct: 332 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 391

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG  +F ++ +D+ I P M+H   MVD+LGRAG ++EA  FI+ MP EP + ++ A+L A
Sbjct: 392 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 451

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C+IHKN+ELGE+ + ++  L P+  G  VLL+NIY+AA  WD  A +R   +  GL+K P
Sbjct: 452 CRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIP 511

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           GCS +E+   VH+F  G   H Q  +I   LE L+ E+K  GY  + + +  DVE+  +E
Sbjct: 512 GCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKE 571

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +L  HSEKLAIAFG+LN   G  I + KNLRVCGDCH A K+++L+T REI VRD +RF
Sbjct: 572 QILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRF 631

Query: 799 HCFKNGVCSCGDYW 812
           H FKNG C+CGD+W
Sbjct: 632 HHFKNGTCNCGDFW 645



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 249/538 (46%), Gaps = 47/538 (8%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLE C    SL E ++I    +K+          KL  L+   N +  A R+F+ IP+  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ +++ YA     D A+     M +  V P  Y Y ++LK C  +  I  G EIH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
              + G   D+F  T +V+ YAKCG + EA ++F  M  RD+V+WN ++AG +  G  + 
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ L+ +M EEG   +  TIV +LP                                   
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPT---------------------------------- 219

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
               C  +  AR +FD M  RN VSW++MI  YV     +EA+ IF+ M   G++P   T
Sbjct: 220 ----CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTT 275

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L AC+ L  L+ G   H  L      TD  + N+LI MYSKC K+  A ++F+++ 
Sbjct: 276 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 335

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK- 461
              +VSWNAMI+GY  +G   EAL  F  + +  +KPD  T + ++ + +   ++   + 
Sbjct: 336 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 395

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH 520
           W  A+         +     ++D+  + G +  A     +M  E  V  W+ ++     H
Sbjct: 396 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 455

Query: 521 GLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
              +   E+  K+   GP    +   L  I   S +G  ++  H   + +KD+G++ +
Sbjct: 456 KNIELGEEVSKKIQSLGPESTGNFVLLSNIY--SAAGRWDDAAHIRIT-QKDWGLKKI 510


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/673 (37%), Positives = 400/673 (59%), Gaps = 5/673 (0%)

Query: 51  TSLKEL--RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD-ALYH 107
           ++L+EL  + I   I+  GL +       L++L+   +    A  VF+ I + LD  L++
Sbjct: 207 SALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWN 266

Query: 108 TMLKGYAK-FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
            ++    K F  ++    F   + +  + P  + Y  +LK C  +G +  GK +H  +I 
Sbjct: 267 GLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIK 326

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +GF++D+  M+  V MYAKC   E+A K+FD MPERD+ SWN +++ + Q+G  E AL+L
Sbjct: 327 SGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALEL 386

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M   G + D +T+ +++ + A +  L  GK +H   +R+GF     VS+ALVDMY K
Sbjct: 387 FEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGK 446

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG +E A+ VF+ ++ +NVVSWNSMIA Y   G+ +  + +F++M ++G+ PT  T+   
Sbjct: 447 CGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSI 506

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L AC+   +L+ G F+H  + + ++  D+ + +SLI +Y KC  +  A ++F  +    +
Sbjct: 507 LMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNV 566

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSWN MI GY + G   EAL  F  MR   +KPD+ T  SV+PA ++L+V+   K IH  
Sbjct: 567 VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNF 626

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +I S  E N  VM AL+DMYAKCGAV  A  +F+ + ER   +W  MI  YG+HG    A
Sbjct: 627 IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEA 686

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           ++LF KM +   KP+ +TFL  +SACSH+GLV+EG +YF  +  +YG +P ++HY  ++D
Sbjct: 687 LKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLID 746

Query: 587 LLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           LLGR GRL EA++ +Q+ P I   + +   +  AC +HK ++LGE+    L E DPD+  
Sbjct: 747 LLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPS 806

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +++L+N+YA+   WD++ KVR  +++ GL+K PGCS +E+   +H F      HPQ+  
Sbjct: 807 TYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADM 866

Query: 706 IYTFLETLIDEIK 718
           IY  +  L   ++
Sbjct: 867 IYECMSILASHVE 879


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/707 (38%), Positives = 400/707 (56%), Gaps = 43/707 (6%)

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL-KVCGDVGEIRRGKEIHGQLIVNGFSL 171
           + KF S     S L ++  D  +P      +LL +V     +IR  + +H ++I+     
Sbjct: 16  FRKFQS-RKVSSSLPKLELDQKSP--QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRC 72

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +      ++  YA    +  A K+FD +PER+++  N ++  +  NGF    + +   M 
Sbjct: 73  NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
               R D  T   +L A +  G++ IG+ +HG A + G  S + V   LV MY KCG + 
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            ARLV D M  R+VVSWNS++  Y +    ++A+ + ++M             E++    
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-------------ESVKISH 239

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           D G +              L   VS T +   MY K        D+F K+  K+LVSWN 
Sbjct: 240 DAGTMA------------SLLPAVSNTTTENVMYVK--------DMFFKMGKKSLVSWNV 279

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  Y +N    EA+  + +M +   +PD+ ++ SV+PA  + S +   K IH  + R  
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
              N+ +  ALIDMYAKCG +  AR +F+ M  R V +W  MI  YG  G G  AV LF+
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           K+ +    P+ I F+  ++ACSH+GL+EEG   F  +   Y I P ++H   MVDLLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G++ EA+ FIQ M +EP   V+GA+LGAC++H + ++G  AA++LF+L P++ GY+VLL+
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           NIYA A  W+++  +R IM+ KGL+K PG S VE+   +H+F  G   HPQS  IY  L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579

Query: 712 TLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNS-----SPGSTIHI 765
            L+ ++K  GYVPD+ S +HDVE+  +E  L+ HSEKLAI F L+N+        +TI I
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLR+CGDCH A K IS +T REII+RD +RFH F+ GVCSCGDYW
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 230/485 (47%), Gaps = 51/485 (10%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L+    ++ LR +   II   L        KL+  +     ++ A +VF+ IP++   +
Sbjct: 48  VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            + M++ Y       + V     M   +V P  Y +  +LK C   G I  G++IHG   
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G S  LF   G+V+MY KCG + EA  + D M  RD+VSWN++V G+AQN   + AL+
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M       D  T+ S+LPAV+N  +                ++++ V     DM+ 
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSNTTT----------------ENVMYVK----DMFF 267

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           K G+             +++VSWN MI  Y++   P EA+ ++ +M   G EP  V+I  
Sbjct: 268 KMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L AC D   L  G  +H  +++ KL  ++ + N+LI MY+KC  +++A D+F  ++ + 
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW AMI  Y  +GR  +A+  F K++   + PDS   V+ + A +   ++        
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG----- 429

Query: 466 LVIRSCFE---------KNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMID 515
              RSCF+           +  +  ++D+  + G V  A R + DM  E +   W  ++ 
Sbjct: 430 ---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486

Query: 516 GYGTH 520
               H
Sbjct: 487 ACRVH 491


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/690 (37%), Positives = 395/690 (57%), Gaps = 38/690 (5%)

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE---AYKMFDRMPERDLVSWNTIVAGFAQN 217
           H Q++  G     +A++ ++ +       +    A  +F+   E +L+ WNT++ G A +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                 L++  RM   G   +  T   +L + A   +   G+ +H   M+ G +      
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 278 TALVDMYAKCGRVE-------------------------------TARLVFDGMKSRNVV 306
           T+L+ MYA+ GR+E                               +AR VFD +  R+VV
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN+MI  YVE    EEA+ +F++M+   V P   T++  L ACA  G +E G  +H L+
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 367 DQLK-LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           D     G+ + + N+ I +YSKC  V+ A+ +F  L  K +VSWN +I GY       EA
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC--FEKNVFVMTALI 483
           L  F +M      P+  TM+SV+PA A L  I   +WIH  + +          + T+LI
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAKCG +  A  +F+ M  + +++WN MI G+  HG   AA +LF++M +   +P+DI
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           T +  +SACSHSGL++ G H F S+ +DY I P ++HYG M+DLLG AG   EA + I  
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   ++ ++L ACK+H N+EL E  A +L E++P+  G +VLL+NIYA A  W+ +
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A++R ++  KG++K PGCS +E+ + VH F  G   HPQS+ IY  LE +   ++ AG+V
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFV 601

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + + KNLRVC +CH ATK I
Sbjct: 602 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLI 661

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +  REI+ RD  RFH F++GVCSC DYW
Sbjct: 662 SKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/580 (29%), Positives = 286/580 (49%), Gaps = 78/580 (13%)

Query: 63  IIKSGLCDQHLFQTKLVSLFC---KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
           ++K+GL + +   +KL+ L      ++ L  A  VFE   +    +++TML+G A  + L
Sbjct: 5   MVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDL 64

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
              +   +RM      P  Y + +LLK C        G++IH Q++  G  LD +A T +
Sbjct: 65  VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSL 124

Query: 180 VNMYAKCGQIEEA-------------------------------YKMFDRMPERDLVSWN 208
           ++MYA+ G++E+A                                K+FD + ERD+VSWN
Sbjct: 125 ISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWN 184

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA-MR 267
            ++ G+ +N   E AL+L   M     R D  T+VS+L A A  GS+ +G+ +H      
Sbjct: 185 AMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDH 244

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            GF S + +  A + +Y+KCG VE A  +F+G+  ++VVSWN++I  Y      +EA+ +
Sbjct: 245 HGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 304

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVS-MTNSLISMY 385
           FQ+ML  G  P +VT++  L ACA LG ++ G ++H  +D+ LK  T+ S +  SLI MY
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMY 364

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           +KC  ++ A  +F+ +  K+L SWNAMI G+A +GR N A + F +MR   I+PD  T+V
Sbjct: 365 AKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLV 424

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
            ++ A +   ++   + I   V +       + +T  ++ Y                   
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQD------YNITPKLEHYG------------------ 460

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
                  MID  G  GL K A E+ + M   P +P+ + +   + AC   G +E    + 
Sbjct: 461 ------CMIDLLGHAGLFKEAEEIIHMM---PMEPDGVIWCSLLKACKMHGNLELAESFA 511

Query: 566 TSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNEAWDFIQKM 604
             L +   IEP     Y  + ++   AGR    W+ + ++
Sbjct: 512 QKLME---IEPENSGSYVLLSNIYATAGR----WEDVARI 544


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/629 (41%), Positives = 392/629 (62%), Gaps = 11/629 (1%)

Query: 195 MFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +F+R  ++ D+ SWN+++A  A++G +  AL   + M +        +    + A +++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +  GK  H  A   G+ S + VS+AL+ MY+ CG++E AR VFD +  RN+VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 314 AYVEGGNPEEAMRIFQKML------DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            Y   GN  +A+ +F+ +L      D  +   ++ ++  + AC+ +        +H  + 
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 368 QLKLGTDVSMTNSLISMYSKCKK--VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +      VS+ N+L+  Y+K  +  V  A  IF ++  K  VS+N+++  YAQ+G  NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 426 LNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
            + F ++ + K +  +  T+ +V+ A++    +R  K IH  VIR   E +V V T++ID
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY KCG V TAR  FD M  ++V +W  MI GYG HG    A+ELF  M++   +PN IT
Sbjct: 331 MYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH+GL + G H+F ++K  +G+EP ++HYG MVDLLGRAG L +A+D IQKM
Sbjct: 391 FVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKM 450

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
            +EP   ++ ++L AC+IHKNVEL E +  RLFELDP   GY++LL++IYA +  W  + 
Sbjct: 451 KMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVE 510

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR  M+ +GL K PG SL+EL  EVH F  G  +HPQ ++IY FL  L  ++  AGYV 
Sbjct: 511 RVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +T+S+ HDV++  +E  L  HSEKLAIAFG++N+ PGST+++ KNLRVC DCHN  K IS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  RE +VRD  RFH FK+G CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 231/462 (50%), Gaps = 21/462 (4%)

Query: 80  SLFCKYNSLSDAAR---------VFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRM 129
           +LFC  + L    R         +F    DK D   +++++   A+     +A+     M
Sbjct: 8   ALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSM 67

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   + P   ++   +K C  + +I  GK+ H Q  V G+  D+F  + ++ MY+ CG++
Sbjct: 68  RKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKL 127

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF------ITIV 243
           E+A K+FD +P+R++VSW +++ G+  NG A  A+ L   +  E    D       + +V
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMV 187

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--VETARLVFDGMK 301
           S++ A + V +  + +++H + ++ GFD  V+V   L+D YAK G   V  AR +FD + 
Sbjct: 188 SVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGI 360
            ++ VS+NS+++ Y + G   EA  +F++++ + V   N +T+   L A +  G L  G 
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK 307

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + ++ L  DV +  S+I MY KC +V+ A   F +++ K + SW AMI GY  +G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
              +AL  F  M    ++P+  T VSV+ A +   +      W +A+  R   E  +   
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHY 427

Query: 480 TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
             ++D+  + G +  A  L   M  E     W+ ++     H
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIH 469



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 166/289 (57%), Gaps = 9/289 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF---LIRMRY 131
            + L+ ++     L DA +VF+ IP +    + +M++GY    +  DAVS    L+    
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEEN 173

Query: 132 DDVAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           DD A +  +   ++ V   C  V      + IH  +I  GF   +     +++ YAK G+
Sbjct: 174 DDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233

Query: 189 --IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSI 245
             +  A K+FD++ ++D VS+N+I++ +AQ+G +  A D+  R+  E+    + IT+ ++
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTV 293

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L AV++ G+LRIGK +H   +R G +  V V T+++DMY KCGRVETARL FD MK++NV
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNV 353

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            SW +MIA Y   G+  +A+ +F  M+D GV P  +T +  L AC+  G
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 19/280 (6%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+ I DK    Y++++  YA+    ++A     R+  + V  V +N   L  V   
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKV--VTFNCITLSTVLLA 296

Query: 151 V---GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           V   G +R GK IH Q+I  G   D+   T +++MY KCG++E A   FDRM  +++ SW
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSW 356

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG----KAVHG 263
             ++AG+  +G A  AL+L   M + G R ++IT VS+L A ++ G   +G     A+ G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKG 416

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPE 322
              R G +  +     +VD+  + G ++ A  +   MK   + + W+S++AA     N E
Sbjct: 417 ---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVE 473

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEAL-HACADLG---DLER 358
            A     ++ +  ++P+N      L H  AD G   D+ER
Sbjct: 474 LAEISVARLFE--LDPSNCGYYMLLSHIYADSGRWKDVER 511



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)

Query: 43  SALLLEVCTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           S +LL V  S  L+  + I   +I+ GL D  +  T ++ ++CK   +  A   F+ + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKN 350

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--- 157
           K    +  M+ GY        A+     M    V P    +  +L  C   G    G   
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHW 410

Query: 158 -KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFA 215
              + G+    G    L     +V++  + G +++AY +  +M  E D + W++++A   
Sbjct: 411 FNAMKGRF---GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACR 467

Query: 216 QNGFAELALDLVTRMHE 232
            +   ELA   V R+ E
Sbjct: 468 IHKNVELAEISVARLFE 484


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/755 (34%), Positives = 423/755 (56%), Gaps = 13/755 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K GL         LV ++ K  ++ D  RVF+ + D+    ++++L GY+     D   
Sbjct: 129 VKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVW 188

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                M+ +   P  Y  + ++    + G +  G +IH  ++  GF  +      +++M 
Sbjct: 189 ELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISML 248

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           +K G + +A  +FD M  +D VSWN+++AG   NG    A +    M   G +    T  
Sbjct: 249 SKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFA 308

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS- 302
           S++ + A++  L + + +H   +++G  +  NV TAL+    KC  ++ A  +F  M   
Sbjct: 309 SVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGV 368

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++VVSW +MI+ Y++ G+ ++A+ +F  M  +GV+P + T    L        ++  +F+
Sbjct: 369 QSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL-------TVQHAVFI 421

Query: 363 ---HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
              H  + +       S+  +L+  + K   +  A  +F  ++ K +++W+AM+ GYAQ 
Sbjct: 422 SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQA 481

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSCFEKNVFV 478
           G   EA   F ++  + IKP+ FT  S+I A  A  + +   K  HA  I+      + V
Sbjct: 482 GETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCV 541

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            ++L+ +YAK G + +A  +F    ER + +WN MI GY  HG  K A+E+F +M +   
Sbjct: 542 SSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNL 601

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           + + ITF+  ISAC+H+GLV +G +YF  +  D+ I P M+HY  M+DL  RAG L +A 
Sbjct: 602 EVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAM 661

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           D I  MP  P  TV+  +L A ++H+N+ELG+ AA ++  L+P     +VLL+NIYAAA 
Sbjct: 662 DIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAG 721

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W +   VR +M+K+ ++K PG S +E+KN+ +SF +G   HP S  IY+ L  L   ++
Sbjct: 722 NWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLR 781

Query: 719 AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GY PDTN + HD+ED  +E +LS HSE+LAIAFGL+ + P   + I KNLRVCGDCH+
Sbjct: 782 DVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHS 841

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K +SLV  R I+VRD +RFH FK G+CSCGDYW
Sbjct: 842 FIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/560 (29%), Positives = 299/560 (53%), Gaps = 20/560 (3%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+  P +    ++ +L  Y++     +A+   + +    ++P  Y  + +L VC  
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
                 G+++H Q +  G    L     +V+MY K G + +  ++FD M +RD+VSWN++
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + G++ N F +   +L   M  EG R D+ T+ +++ A+AN G++ IG  +H   ++ GF
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           ++   V  +L+ M +K G +  AR+VFD M++++ VSWNSMIA +V  G   EA   F  
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M   G +PT+ T    + +CA L +L     +H    +  L T+ ++  +L+   +KCK+
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 391 VDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +D A  +FS + G +++VSW AMI GY QNG  ++A+N F  MR + +KP+ FT  +++ 
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT 414

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
               +    +   IHA VI++ +EK+  V TAL+D + K G +  A  +F+++  + V  
Sbjct: 415 VQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIA 470

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-SGLVEEGIHYFTSL 568
           W+ M+ GY   G  + A ++F+++     KPN+ TF   I+AC+  +  VE+G  +    
Sbjct: 471 WSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHA-- 528

Query: 569 KKDYGIEPVMDH----YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH- 623
              Y I+  +++      ++V L  + G +  A +  ++   E  +  + +M+     H 
Sbjct: 529 ---YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHG 584

Query: 624 ---KNVELGEKAANRLFELD 640
              K +E+ E+   R  E+D
Sbjct: 585 QAKKALEVFEEMQKRNLEVD 604



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 251/478 (52%), Gaps = 11/478 (2%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           +I  L++K G   + L    L+S+  K   L DA  VF+ + +K    +++M+ G+    
Sbjct: 224 QIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVING 283

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
              +A      M+     P    +  ++K C  + E+   + +H + + +G S +   +T
Sbjct: 284 QDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            ++    KC +I++A+ +F  M   + +VSW  +++G+ QNG  + A++L + M  EG +
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVK 403

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T  +IL     V        +H   ++  ++   +V TAL+D + K G +  A  V
Sbjct: 404 PNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKV 459

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC-ADLGD 355
           F+ +++++V++W++M+A Y + G  EEA +IF ++  +G++P   T    ++AC A    
Sbjct: 460 FELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +E+G   H    +L+L   + +++SL+++Y+K   ++ A +IF + + + LVSWN+MI G
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISG 579

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEK 474
           YAQ+G+  +AL  F +M+ +N++ D+ T + VI A A   ++ +   + + ++       
Sbjct: 580 YAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINP 639

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH---GLGKAAVE 528
            +   + +ID+Y++ G +G A  + + M      T W +++     H    LGK A E
Sbjct: 640 TMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAE 697


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/570 (44%), Positives = 365/570 (64%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L +     +++ GK +H     AGF     ++T LV++Y  C  + +ARL+FD +   
Sbjct: 80  SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH 139

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N+  WN +I  Y   G  E A++++ +M D G+ P N T    L ACA L  +E G  +H
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           + + Q     DV +  +LI MY+KC  V  A ++F K+  +  V WN+M+  Y+QNG  +
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
             L+   +M    ++P   T+V+ I A A+ + +   + +H L  R  FE +  V TAL+
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALV 319

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAKCG+V  AR LF+ +  + V +WN MI GY  HG    A++LF +M     KP+ I
Sbjct: 320 DMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHI 378

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+  +SACSH GL+EEG  +F ++ +DY I+P + HY  MVDLLG +GRL+EA++ I +
Sbjct: 379 TFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQ 438

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M + P   V+GA+L +CKIH NVELGE A  RL EL+PD+ G +V+L+NIYA A  W+ +
Sbjct: 439 MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGV 498

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           AK+R +M  + L+K+  CS +E+KN+VH+F SG T HP S  IY+ LE +   +K AGY 
Sbjct: 499 AKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYS 558

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P T S+ HDVED  + N++ SHSE+LAIAFGL+++ PG+ + I KNLR+C DCH A K+I
Sbjct: 559 PSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFI 618

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +T REI VRD++R+H FK+GVCSCGDYW
Sbjct: 619 SKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 214/400 (53%), Gaps = 6/400 (1%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           + P   NY  LL+ C     I+ GK++H Q+ + GF  D    T +VN+Y  C  +  A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +FDR+P+ ++  WN ++ G+A NG  E A+ L  +M + G   D  T   +L A A + 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           ++  G+ +H + ++ G++  V V  AL+DMYAKCG V +AR VFD +  R+ V WNSM+A
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY + G+P+  + +  +M+  G+ PT  T++ A+ A AD   L +G  +H L  + +  +
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
              +  +L+ MY+KC  V  A ++F +L  K +VSWNAMI GYA +G   EAL+ F +M 
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM- 369

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAV 492
           ++  KPD  T V V+ A +   ++         +IR    +  V   T ++D+    G +
Sbjct: 370 NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRL 429

Query: 493 GTARALFDMMNERHVT-TWNVMIDGYGTHG---LGKAAVE 528
             A  L   M     +  W  +++    H    LG+ A+E
Sbjct: 430 DEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALE 469



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 207/377 (54%), Gaps = 10/377 (2%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL+ C + K ++   ++   +  +G     +  TKLV+L+C  +SLS A  +F+ IP 
Sbjct: 79  ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               L++ +++GYA     + AV    +M    + P  + + ++LK C  +  I  G+EI
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++  G+  D+F    +++MYAKCG +  A ++FD++  RD V WN+++A ++QNG  
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           +  L L + M   G R    T+V+ + A A+  +L  G+ +HG + R  F+S   V TAL
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMYAKCG V  AR +F+ +  + VVSWN+MI  Y   G+  EA+ +F++M ++  +P +
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDH 377

Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +T +  L AC+  G LE G +F   ++   K+   V     ++ +     ++D A ++  
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLI- 436

Query: 400 KLQGKTLVS---WNAMI 413
            +Q K L     W A++
Sbjct: 437 -MQMKVLPDSGVWGALL 452



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 6/288 (2%)

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           PT       L +C     ++ G  +H  +     G D  +   L+++Y  C  +  A  +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++    +  WN +I GYA NG    A+  + +M    + PD+FT   V+ A A LS I
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
            + + IH  V+++ +EK+VFV  ALIDMYAKCG VG+AR +FD +  R    WN M+  Y
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIE 575
             +G   A + L ++M+    +P + T + AISA + +  + +G  +H  +  ++    +
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            V     A+VD+  + G +  A +  +++ ++  +  + AM+    +H
Sbjct: 313 KVKT---ALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMH 356



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 12/192 (6%)

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
            S  + P      S++ +      I+  K +HA V  + F  +  + T L+++Y  C ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            +AR LFD + + ++  WNV+I GY  +G  +AAV+L+ +M +    P++ TF   + AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 553 SHSGLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           +    +E G  IH     T  +KD  +        A++D+  + G +  A +   K+ + 
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVG------AALIDMYAKCGCVGSAREVFDKILVR 240

Query: 608 PGITVFGAMLGA 619
             + ++ +ML A
Sbjct: 241 DAV-LWNSMLAA 251


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/784 (36%), Positives = 451/784 (57%), Gaps = 17/784 (2%)

Query: 44   ALLLEVCTS----LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            +L+   C+S    L  L ++L  + KSG        + LVS F ++    DA  +FE + 
Sbjct: 758  SLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMG 817

Query: 100  DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI----R 155
             +     + ++ G  K    + A      M+ D V     +Y  LL    +   +    R
Sbjct: 818  VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 876

Query: 156  RGKEIHGQLIVNGFSLDLFAM-TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
            +G+E+H  +I  G + +  A+  G+VNMYAK G I +A  +F+ M E+D VSWN++++G 
Sbjct: 877  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 936

Query: 215  AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
             QN  +E A +   RM   G      T++S L + A++G + +G+ +H   ++ G D+ V
Sbjct: 937  DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996

Query: 275  NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG-GNPEEAMRIFQKMLD 333
            +VS AL+ +YA+ G       VF  M   + VSWNS+I A  +   +  +A++ F +M+ 
Sbjct: 997  SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR 1056

Query: 334  QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             G   + VT +  L A + L   E    +H L+ +  L  D ++ N+L+S Y KC +++ 
Sbjct: 1057 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 1116

Query: 394  AADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
               IF+++ + +  VSWN+MI GY  N  +++A++    M  K  + DSFT  +V+ A A
Sbjct: 1117 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACA 1176

Query: 453  ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
             ++ +     +HA  IR+C E +V V +AL+DMY+KCG +  A   F++M  R+V +WN 
Sbjct: 1177 SVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNS 1236

Query: 513  MIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT-FLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI GY  HG G+ A++LF +M+     P+ +   L  +SACSH G VEEG  +F S+ + 
Sbjct: 1237 MISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEV 1296

Query: 572  YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNVELG 629
            Y + P ++H+  MVDLLGRAG+L+E  DFI  MP++P + ++  +LGAC     +N ELG
Sbjct: 1297 YRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELG 1356

Query: 630  EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
             +AA  L EL+P     +VLLAN+YA+   W+ +AK R  M++  ++K  GCS V +K+ 
Sbjct: 1357 RRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDG 1416

Query: 690  VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKL 748
            VH F +G   HP+   IY  L  L  +++ AGY+P T  ++ D+E   +E LLS HSEK+
Sbjct: 1417 VHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKI 1476

Query: 749  AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
            A+AF +L       I I KNLRVCGDCH+A  YIS + GR+I++RD +RFH F++G CSC
Sbjct: 1477 AVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSC 1535

Query: 809  GDYW 812
            GDYW
Sbjct: 1536 GDYW 1539



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/620 (25%), Positives = 282/620 (45%), Gaps = 31/620 (5%)

Query: 5    SQCQLSV--FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL 62
            +QC  S+    +   T T H +    S      S I R+  +     C S +E R +   
Sbjct: 516  NQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGS-----CCS-EEARELHLQ 569

Query: 63   IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
             IK G          L++++ +   L  A ++F+ + ++    +  ++ GY +    D+A
Sbjct: 570  SIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEA 629

Query: 123  VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVV 180
             +    M      P  Y +   L+ C + G    + G +IHG +    +  D+     ++
Sbjct: 630  CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 689

Query: 181  NMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
            +MY  C     +A  +FDR+  R+ +SWN+I++ +++ G    A DL + M +EG    F
Sbjct: 690  SMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSF 749

Query: 240  ----ITIVSILPAVANVGSLRIGKAVHGYAM----RAGFDSIVNVSTALVDMYAKCGRVE 291
                 T  S++ A  +  S+  G  V    +    ++GF   + V +ALV  +A+ G  +
Sbjct: 750  KPNEYTFGSLITAACS--SVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTD 807

Query: 292  TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHAC 350
             A+ +F+ M  RNVVS N ++   V+    E A ++F +M D  G+   +  ++  L A 
Sbjct: 808  DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL--LSAF 865

Query: 351  ADLGDLE----RGIFVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            ++   LE    +G  VH  + +  L  + V++ N L++MY+K   +  A  +F  +  K 
Sbjct: 866  SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKD 925

Query: 406  LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
             VSWN++I G  QN    +A   F +MR     P +FT++S + + A L  I   + IH 
Sbjct: 926  SVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHC 985

Query: 466  LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG-THGLGK 524
              ++   + +V V  AL+ +YA+ G       +F +M E    +WN +I     +     
Sbjct: 986  DGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVS 1045

Query: 525  AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
             AV+ F +M+ G    + +TF+  +SA S   L  E  H   +L   Y +        A+
Sbjct: 1046 QAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNAL 1104

Query: 585  VDLLGRAGRLNEAWDFIQKM 604
            +   G+ G +NE      +M
Sbjct: 1105 LSCYGKCGEMNECEKIFARM 1124



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 245/522 (46%), Gaps = 30/522 (5%)

Query: 157  GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
             +E+H Q I  GF  +LF    ++N+Y + G +  A K+FD M  R+LV+W  +++G+ Q
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 217  NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIV 274
            NG  + A      M   G   +     S L A    G    ++G  +HG   +  + S V
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 275  NVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
             V   L+ MY  C      AR VFD +  RN +SWNS+I+ Y   G+   A  +F  M  
Sbjct: 683  VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742

Query: 334  QGV----EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSK 387
            +G+    +P   T    + A     D    +    L    K G   D+ + ++L+S +++
Sbjct: 743  EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802

Query: 388  CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVS 446
                D A +IF ++  + +VS N +++G  +  +   A   F +M+    I  DS+  V 
Sbjct: 803  FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSY--VV 860

Query: 447  VIPALAELSVI----RYAKWIHALVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDM 501
            ++ A +E SV+    R  + +HA VIR+    N V +   L++MYAK GA+  A ++F++
Sbjct: 861  LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 920

Query: 502  MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG--LVE 559
            M E+   +WN +I G   +   + A E F +M    + P++ T +  +S+C+  G  ++ 
Sbjct: 921  MVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLG 980

Query: 560  EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            E IH    LK   G++  +    A++ L    G   E       MP E     + +++GA
Sbjct: 981  EQIH-CDGLK--LGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 1036

Query: 620  CKIHKNVELGEKAANRLFELDPDEGGY---HVLLANIYAAAS 658
                 + E     A + F L+   GG+    V   NI +A S
Sbjct: 1037 L---SDSEASVSQAVKYF-LEMMRGGWGLSRVTFINILSAVS 1074


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/758 (34%), Positives = 435/758 (57%), Gaps = 6/758 (0%)

Query: 58   RILPLIIKSGLCDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
            +IL  +IKSGL    +     L+S+F  Y+S+ +A+RVF  + ++    +++++   A  
Sbjct: 371  QILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHN 430

Query: 117  ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               ++++     MR           + LL  CG    ++ G+ +HG +  +G   ++   
Sbjct: 431  GRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVC 490

Query: 177  TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
              +++MYA+ G  E+A  +F  MP RDL+SWN+++A   ++G    A+ L+  M +  + 
Sbjct: 491  NSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA 550

Query: 237  GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
             +++T  + L A  N+  L+I   VH + +       + +   LV MY K G ++ A+ V
Sbjct: 551  MNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKV 607

Query: 297  FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
               M  R+VV+WN++I  + +  +P   ++ F  M  +G+    +TI+  L  C     L
Sbjct: 608  CKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYL 667

Query: 357  -ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
             + G+ +H  +       D  + +SLI+MY++C  ++ ++ IF  L  K   +WNA+   
Sbjct: 668  LKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSA 727

Query: 416  YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
             A  G   EAL +  +MR+  +  D F+    +  +  L+V+   + +H+ +I+  FE +
Sbjct: 728  NAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELD 787

Query: 476  VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             +V+ A +DMY KCG +     +  +   R   +WN++I     HG  + A E F++ML+
Sbjct: 788  EYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLD 847

Query: 536  GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
               KP+ +TF+  +SACSH GLV+EG+ YF+S+  ++G+   ++H   ++DLLGR+GRL 
Sbjct: 848  LGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLA 907

Query: 596  EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
            EA  FI KMP+ P   V+ ++L ACK+H N+ELG KAA+RLFEL+  +   +VL +N+ A
Sbjct: 908  EAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCA 967

Query: 656  AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
            +   W  +  VR  ME + L+K P CS ++LKN+V +F  G   HPQS +IY  LE L  
Sbjct: 968  STQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRK 1027

Query: 716  EIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
              +  G++PDT+ ++ D ++  +E+ L +HSE++A+AFGL+NS+ GS + I KNLRVCGD
Sbjct: 1028 MTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGD 1087

Query: 775  CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            CH+  K +S + GR+I+VRD +RFH F  G CSC DYW
Sbjct: 1088 CHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 313/611 (51%), Gaps = 23/611 (3%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   ++K GL       T L+  +  + S+S+A ++FE I +     + +++  YA  
Sbjct: 269 RQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADN 328

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               + ++    +R++ +         +++ CG  G+   G +I G +I +G      ++
Sbjct: 329 GHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSV 388

Query: 177 -TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
              +++M+     +EEA ++F+ M ERD +SWN+I+   A NG  E +L     M     
Sbjct: 389 ANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP 448

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           + D+ITI ++LPA  +   L+ G+ +HG   ++G +S V V  +L+ MYA+ G  E A L
Sbjct: 449 KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF  M +R+++SWNSM+A++VE G    A+ +  +ML        VT   AL AC +L  
Sbjct: 509 VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEK 568

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L+    VH  +    +  ++ + N+L++MY K   +D A  +   +  + +V+WNA+I G
Sbjct: 569 LK---IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI-PALAELSVIRYAKWIHALVIRSCFEK 474
           +A +   N  +  F  MR + +  +  T+V+++   ++   ++++   IHA ++ + FE 
Sbjct: 626 HADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFEL 685

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           + +V ++LI MYA+CG + T+  +FD++  ++ +TWN +      +G G+ A++   +M 
Sbjct: 686 DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAG 592
                 +  +F  A++   +  +++EG    + + K  G E  +D Y   A +D+ G+ G
Sbjct: 746 NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIK-LGFE--LDEYVLNATMDMYGKCG 802

Query: 593 RLNEAWDFIQKMPIEPGI---TVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYH 647
            ++   D  + +PI P I     +  ++ A   H       +A + + +  L PD    H
Sbjct: 803 EID---DVFRILPI-PKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPD----H 854

Query: 648 VLLANIYAAAS 658
           V   ++ +A S
Sbjct: 855 VTFVSLLSACS 865



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 11/481 (2%)

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           +L K   ++ E   GK +H   + +    + F    +VNMY+K G I+ A  +FD+M +R
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAV 261
           +  SWN +++GF + G+   A+     M E G       I S++ A    G +  G + +
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQI 271

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           HGY ++ G  S V V T+L+  Y   G V  A  +F+ ++  N+VSW S++  Y + G+ 
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD---VSMT 378
           +E + I++ +   G+  T  T+   +  C   GD   G  +  L D +K G D   VS+ 
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQI--LGDVIKSGLDTSSVSVA 389

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSLISM+     V+ A+ +F+ +Q +  +SWN++I   A NGR  E+L +F  MR  + K
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            D  T+ +++PA      +++ + +H L+ +S  E NV V  +L+ MYA+ G+   A  +
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R + +WN M+  +   G    A+ L  +ML+     N +TF  A+SAC +    
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL--- 566

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            E +    +    + +   +     +V + G+ G ++EA    + MP E  +  + A++G
Sbjct: 567 -EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIG 624

Query: 619 A 619
            
Sbjct: 625 G 625



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 170/357 (47%), Gaps = 2/357 (0%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L  C +L++L+ +   +I   +    +    LV+++ K+  + +A +V + +P++    +
Sbjct: 560 LSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTW 619

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLI 165
           + ++ G+A     +  +     MR + +         LL  C      ++ G  IH  ++
Sbjct: 620 NALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIV 679

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V GF LD +  + ++ MYA+CG +  +  +FD +  ++  +WN I +  A  G  E AL 
Sbjct: 680 VAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK 739

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            + RM  +G   D  +    L  + N+  L  G+ +H + ++ GF+    V  A +DMY 
Sbjct: 740 FIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYG 799

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG ++    +    K R+  SWN +I+A    G   +A   F +MLD G++P +VT + 
Sbjct: 800 KCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVS 859

Query: 346 ALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            L AC+  G ++ G ++   +  +  + T +     +I +  +  ++  A     K+
Sbjct: 860 LLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKM 916



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 177/402 (44%), Gaps = 12/402 (2%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N +     +N F    +    R H   +   F+         + +    +GKA+H   ++
Sbjct: 121 NQLETCVKENEFLSYGIHTFIRNHSNPQVSRFLQ-----KGFSEISEGNVGKALHALCVK 175

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
                    +  LV+MY+K G ++ A+ VFD M  RN  SWN+MI+ +V  G   +AM+ 
Sbjct: 176 DVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQF 235

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIF-VHKLLDQLKLGTDVSMTNSLISMYS 386
           F  M + GV P++  I   + AC   G +  G   +H  + +  L ++V +  SL+  Y 
Sbjct: 236 FCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYG 295

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
               V  A  +F +++   +VSW ++++ YA NG   E LN +  +R   +     TM +
Sbjct: 296 THGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMAT 355

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFE-KNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           VI              I   VI+S  +  +V V  +LI M+    +V  A  +F+ M ER
Sbjct: 356 VIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER 415

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE--EGIH 563
              +WN +I     +G  + ++  F  M     K + IT    + AC  +  ++   G+H
Sbjct: 416 DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH 475

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
               L    G+E  +    +++ +  +AG   +A      MP
Sbjct: 476 ---GLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/688 (37%), Positives = 408/688 (59%), Gaps = 6/688 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LLE C S   + ++    +K GL       TKL  L+ +Y SL  A ++FE  P K   L
Sbjct: 10  LLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVA---PVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           ++ +L+ Y       + +S   +M  D V    P  Y  +  LK C  + ++  GK IHG
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +      D+F  + ++ +Y+KCGQ+ +A K+F   P+ D+V W +I+ G+ QNG  EL
Sbjct: 130 -FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPEL 188

Query: 223 ALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           AL   +RM   E    D +T+VS   A A +    +G++VHG+  R GFD+ + ++ +++
Sbjct: 189 ALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSIL 248

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           ++Y K G +  A  +F  M  ++++SW+SM+A Y + G    A+ +F +M+D+ +E   V
Sbjct: 249 NLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 308

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++ AL ACA   +LE G  +HKL        D++++ +L+ MY KC   + A ++F+++
Sbjct: 309 TVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRM 368

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +VSW  +  GYA+ G  +++L  FC M S   +PD+  +V ++ A +EL +++ A 
Sbjct: 369 PKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQAL 428

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +HA V +S F+ N F+  +LI++YAKC ++  A  +F  +    V TW+ +I  YG HG
Sbjct: 429 CLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHG 488

Query: 522 LGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
            G+ A++L ++M      KPND+TF+  +SACSH+GL+EEGI  F  +  +Y + P ++H
Sbjct: 489 QGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEH 548

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           YG MVDLLGR G L++A D I  MP++ G  V+GA+LGAC+IH+N+++GE AA  LF LD
Sbjct: 549 YGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLD 608

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P+  GY+ LL+NIY     W   AK+RT++++  L+K  G S+VE+KNEVHSF +    H
Sbjct: 609 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFH 668

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNS 728
            +S +IY  L  L   ++  GY PD  +
Sbjct: 669 GESDQIYEMLRKLDARMREEGYDPDLQT 696


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/737 (37%), Positives = 405/737 (54%), Gaps = 70/737 (9%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  LLK C D       K+IH  +I    + ++F +  +V+ YAK  +I  A ++FD+M
Sbjct: 17  HYCELLKHCRDT------KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70

Query: 200 PER-------------------------------DLVSWNTIVAGFAQNGFAELALDLVT 228
           P+R                               D+VSWN++++ +A  GF   ++    
Sbjct: 71  PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130

Query: 229 RMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            M   G    + I + ++L   +  G + +G  VHG+ ++ GF S V V + LVDMY+K 
Sbjct: 131 LMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKT 190

Query: 288 GRVETARLVFDGMKSRNVV-------------------------------SWNSMIAAYV 316
           G V  AR  FD M  +NVV                               SW +MIA + 
Sbjct: 191 GLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFT 250

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G   EA+ +F++M  + +E    T    L AC  +  L+ G  VH  + +     ++ 
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIF 310

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + ++L+ MY KCK +  A  +F K+  K +VSW AM++GY QNG   EA+  FC M++  
Sbjct: 311 VGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG 370

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           I+PD FT+ SVI + A L+ +      H   + S     + V  AL+ +Y KCG++  + 
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            LF  M+     +W  ++ GY   G     + LF  ML    KP+ +TF+  +SACS +G
Sbjct: 431 RLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAG 490

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           LV++G   F S+ K++ I P+ DHY  M+DL  RAGRL EA  FI KMP  P    + ++
Sbjct: 491 LVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASL 550

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L +C+ H+N+E+G+ AA  L +L+P     ++LL++IYAA   W+++A +R  M  KGL+
Sbjct: 551 LSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLR 610

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PGCS ++ KN+VH F +    +P S +IY+ LE L  ++   GYVPD NS+ HDV+D 
Sbjct: 611 KEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDS 670

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +  +L+ HSEKLAIAFGL+   PG  I + KNLRVCGDCHNATKYIS +T REI+VRD 
Sbjct: 671 EKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDA 730

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK+G CSCGD+W
Sbjct: 731 ARFHLFKDGRCSCGDFW 747



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 249/522 (47%), Gaps = 70/522 (13%)

Query: 48  EVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYH 107
           E+    ++ ++I   IIK+    +      LVS + K++ ++ A RVF+ +P +    ++
Sbjct: 20  ELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWN 79

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAP-----------------------VVYNYTY- 143
           T+L  Y+K A L +       M   D+                         ++YN  + 
Sbjct: 80  TLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFN 139

Query: 144 --------LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                   +L +    G +  G ++HG ++  GF   +F  + +V+MY+K G +  A + 
Sbjct: 140 LNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQA 199

Query: 196 FDRMPERDLV-------------------------------SWNTIVAGFAQNGFAELAL 224
           FD MPE+++V                               SW  ++AGF QNG    A+
Sbjct: 200 FDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAI 259

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           DL   M  E    D  T  S+L A   V +L+ GK VH Y +R  +   + V +ALVDMY
Sbjct: 260 DLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMY 319

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KC  +++A  VF  M  +NVVSW +M+  Y + G  EEA++IF  M + G+EP + T+ 
Sbjct: 320 CKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLG 379

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             + +CA+L  LE G   H       L + ++++N+L+++Y KC  ++ +  +FS++   
Sbjct: 380 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV 439

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
             VSW A++ GYAQ G+ NE L  F  M +   KPD  T + V+ A +   +++    I 
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499

Query: 465 ALVIRSCFEKNVFVM----TALIDMYAKCGAVGTARALFDMM 502
             +I+   E  +  +    T +ID++++ G +  AR   + M
Sbjct: 500 ESMIK---EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKM 538



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 179/339 (52%), Gaps = 4/339 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++   + + + D+ ++F  + +K    +  M+ G+ +     +A+     MR +++   
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y +  +L  CG V  ++ GK++H  +I   +  ++F  + +V+MY KC  I+ A  +F 
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFR 333

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M  +++VSW  ++ G+ QNG++E A+ +   M   G   D  T+ S++ + AN+ SL  
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G   H  A+ +G  S + VS ALV +Y KCG +E +  +F  M   + VSW ++++ Y +
Sbjct: 394 GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQ 453

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTDV 375
            G   E +R+F+ ML  G +P  VT +  L AC+  G +++G  IF   + +   +  + 
Sbjct: 454 FGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIED 513

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
             T  +I ++S+  +++ A    +K+      + W +++
Sbjct: 514 HYT-CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 133/265 (50%), Gaps = 2/265 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E +++   II++   D     + LV ++CK  S+  A  VF  +  K    +  ML 
Sbjct: 289 ALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLV 348

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    ++AV     M+ + + P  +    ++  C ++  +  G + H + +V+G   
Sbjct: 349 GYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 408

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     +V +Y KCG IE+++++F  M   D VSW  +V+G+AQ G A   L L   M 
Sbjct: 409 FITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESML 468

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
             G + D +T + +L A +  G ++ G  +    ++      I +  T ++D++++ GR+
Sbjct: 469 AHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRL 528

Query: 291 ETARLVFDGMK-SRNVVSWNSMIAA 314
           E AR   + M  S + + W S++++
Sbjct: 529 EEARKFINKMPFSPDAIGWASLLSS 553


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/754 (36%), Positives = 422/754 (55%), Gaps = 46/754 (6%)

Query: 68  LCDQHLFQTK-----LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           L DQ  ++ K     ++S +    +L +A ++F   P      + +++ GY K     + 
Sbjct: 59  LFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEG 118

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +    +M  D   P  Y    +L+ C  +  +  GK IH   I      ++F  TG+V+M
Sbjct: 119 LRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDM 178

Query: 183 YAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           Y+KC  + EA  +F  +P+R + V W  ++ G+AQNG +  A+     M  +G   +  T
Sbjct: 179 YSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFT 238

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             SIL A  ++ +   G+ VHG  + +GF   V V +ALVDMYAKCG + +AR++ D M+
Sbjct: 239 FPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             +VV WNSMI   V  G  EEA+ +F KM ++ +   + T    L + A   +L+ G  
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGES 358

Query: 362 VHKLLDQLKLGTDV--SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           VH L   +K G D   +++N+L+ MY+K   +  A D+F+K+  K ++SW +++ GY  N
Sbjct: 359 VHSL--TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHN 416

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   +AL  FC MR+  +  D F +  V  A AEL+VI + + +HA  I+S     +   
Sbjct: 417 GFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE 476

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            +LI MYAKCG +  A  + D M  R+V +W  +I GY                      
Sbjct: 477 NSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGY---------------------- 514

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
                        + +GLVE G  YF S++K YGI+P  D Y  M+DLLGRAG++NEA  
Sbjct: 515 -------------AQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEH 561

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            + +M +EP  T++ ++L AC++H N+ELGE+A   L +L+P     +VLL+N+++ A  
Sbjct: 562 LLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGR 621

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W+  A +R  M+  G+ + PG S +E+K++VH+F S    HP +  IY+ ++ ++  IK 
Sbjct: 622 WEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKE 681

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AG+VPD N ++ D+++  +E  L+ HSEKLA+AFGLL  + G+ I I KNLRVCGDCH+A
Sbjct: 682 AGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSA 741

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KYIS +  R II+RD++ FH F  G CSCGD+W
Sbjct: 742 MKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 181/363 (49%), Gaps = 39/363 (10%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA------------ 324
           S  L+   +K GRV+ AR +FD M  R+  +WN MI+AY   GN  EA            
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99

Query: 325 -------------------MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
                              +R F +M   G +P+  T+   L AC+ L  L  G  +H  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNE 424
             +++L  ++ +   L+ MYSKCK +  A  +F  L   K  V W AM+ GYAQNG   +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A+  F +MR++ ++ + FT  S++ A   +S   + + +H  +I S F  NV+V +AL+D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG + +AR + D M    V  WN MI G  THG  + A+ LF+KM     + +D T
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 545 F---LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           +   L ++++C +   + E +H   SL    G +       A+VD+  + G L+ A D  
Sbjct: 340 YPSVLKSLASCKNLK-IGESVH---SLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVF 395

Query: 602 QKM 604
            K+
Sbjct: 396 NKI 398



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 171/357 (47%), Gaps = 15/357 (4%)

Query: 34  IPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           + S  +  PS  +L  CTS+      R++   II SG       Q+ LV ++ K   L+ 
Sbjct: 232 MESNHFTFPS--ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLAS 289

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  + + +       +++M+ G      +++A+    +M   D+    + Y  +LK    
Sbjct: 290 ARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 349

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
              ++ G+ +H   I  GF         +V+MYAK G +  A  +F+++ ++D++SW ++
Sbjct: 350 CKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSL 409

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           V G+  NGF E AL L   M       D   +  +  A A +  +  G+ VH   +++  
Sbjct: 410 VTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSA 469

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            S+++   +L+ MYAKCG +E A  V D M++RNV+SW ++I  Y + G  E     F+ 
Sbjct: 470 GSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFES 529

Query: 331 MLD-QGVEPTN---VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           M    G++P +     +++ L     + + E       LL+++ +  D ++  SL+S
Sbjct: 530 MEKVYGIKPASDRYACMIDLLGRAGKINEAEH------LLNRMDVEPDATIWKSLLS 580



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 8/282 (2%)

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           KL DQ+    D    N +IS Y+    +  A  +F++      ++W++++ GY +NG   
Sbjct: 58  KLFDQMPY-RDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEV 116

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           E L  F +M S   KP  +T+ SV+ A + LS++   K IH   I+   E N+FV T L+
Sbjct: 117 EGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLV 176

Query: 484 DMYAKCGAVGTARAL-FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           DMY+KC  +  A  L F + + ++   W  M+ GY  +G    A++ F +M     + N 
Sbjct: 177 DMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNH 236

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            TF   ++AC+       G      +    G  P +    A+VD+  + G L  A   + 
Sbjct: 237 FTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQSALVDMYAKCGDLASARMILD 295

Query: 603 KMPIEPGITVFGAMLGACKIHKNVE----LGEKAANRLFELD 640
            M I+  +  + +M+  C  H  +E    L  K  NR   +D
Sbjct: 296 TMEIDD-VVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRID 336


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/757 (35%), Positives = 440/757 (58%), Gaps = 2/757 (0%)

Query: 58   RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
            ++L  II+ G  D       L+S+F  ++S+ +A  VF+ + +     ++ M+  YA   
Sbjct: 968  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 1027

Query: 118  SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
               +++     MR+          + LL VC  V  ++ G+ IHG ++  G   ++    
Sbjct: 1028 LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 1087

Query: 178  GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
             ++ +Y++ G+ E+A  +F  M ERDL+SWN+++A + Q+G     L ++  + + G+  
Sbjct: 1088 TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 1147

Query: 238  DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
            + +T  S L A +N   L   K VH   + AGF   + V  ALV MY K G +  A+ V 
Sbjct: 1148 NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL 1207

Query: 298  DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL- 356
              M   + V+WN++I  + E   P EA++ ++ + ++G+    +T++  L AC+   DL 
Sbjct: 1208 QTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL 1267

Query: 357  ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            + G+ +H  +      +D  + NSLI+MY+KC  ++ +  IF  L  K+ ++WNAM+   
Sbjct: 1268 KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAAN 1327

Query: 417  AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            A +G   EAL  F +MR+  +  D F+    + A A L+V+   + +H LVI+  FE ++
Sbjct: 1328 AHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDL 1387

Query: 477  FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
             V  A +DMY KCG +     +      R   +WN++I  +  HG  + A E F++ML+ 
Sbjct: 1388 HVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKL 1447

Query: 537  PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              KP+ +TF+  +SAC+H GLV+EG+ Y+ S+ +++G+ P ++H   ++DLLGR+GRL+ 
Sbjct: 1448 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 1507

Query: 597  AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
            A  FI++MP+ P    + ++L AC+IH N+EL  K A  L ELDP +   +VL +N+ A 
Sbjct: 1508 AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCAT 1567

Query: 657  ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
            +  W+ +  +R  M    ++K P CS V+LK++VHSF  G   HPQ+ RI   L  L+  
Sbjct: 1568 SGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKM 1627

Query: 717  IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
             K AGYVPDT+ ++HD+++  +E  L +HSE+LA+AFGL+N+   ST+ I KNLRVCGDC
Sbjct: 1628 TKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDC 1687

Query: 776  HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            H+  K++S + GR+I++RD +RFH F  G CSCGDYW
Sbjct: 1688 HSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 207/572 (36%), Positives = 314/572 (54%), Gaps = 3/572 (0%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L++C D    ++G  IH  LI NGF  DL   T ++  Y K G +  A  +FD MP
Sbjct: 33  YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER +VSW  +V+G++QNG  E A  L + M   G + +  T  S L A  ++  L +G  
Sbjct: 93  ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQ 152

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           V G   +  F   + V +ALVD ++KCG++E A  +F  M  R+VVSWN+MI  Y   G 
Sbjct: 153 VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGF 212

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +++  +F+ ML  G+ P   T+   L A A+ G L     +H ++ QL  G+   +T  
Sbjct: 213 ADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGL 272

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN-EALNYFCKMRSKNIKP 439
           LI+ Y+K   +  A D+   +  K L S  A+I GYA  G  + +AL+ F +M   NI  
Sbjct: 273 LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D   + S++   A L+       IHA  ++     +V +  ALIDMYAK G +  A+  F
Sbjct: 333 DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAF 392

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M E++V +W  +I GY  HG G  AV L+ KM     KPND+TFL  + ACSH+GL  
Sbjct: 393 DEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F ++   Y I+P  +HY  MVDL  R G L EA++ + K+ I+   +++GA+LGA
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
             I+  + LG++AA+ LF + P+    +V+LA+IY+AA +WD   K+R +ME++  +K  
Sbjct: 513 SSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNA 572

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           G S  +   +  S      +H  S+R +  L+
Sbjct: 573 GYSFFQATKK--SIPLLQVQHGVSRRDFNILD 602



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 300/598 (50%), Gaps = 5/598 (0%)

Query: 62   LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
             ++K+G+       T LV  +     + +A ++FE +PD     + +++ GY+   +  +
Sbjct: 871  FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930

Query: 122  AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
             ++   RMR + V+     +  +   CG + +   G ++ G +I  GF   +     +++
Sbjct: 931  VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990

Query: 182  MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
            M++    +EEA  +FD M E D++SWN +++ +A +G    +L     M       +  T
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050

Query: 242  IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
            + S+L   ++V +L+ G+ +HG  ++ G DS V +   L+ +Y++ GR E A LVF  M 
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110

Query: 302  SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
             R+++SWNSM+A YV+ G   + ++I  ++L  G    +VT   AL AC++   L     
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 1170

Query: 362  VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
            VH L+        + + N+L++MY K   +  A  +   +     V+WNA+I G+A+N  
Sbjct: 1171 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 1230

Query: 422  VNEALNYFCKMRSKNIKPDSFTMVSVIPAL-AELSVIRYAKWIHALVIRSCFEKNVFVMT 480
             NEA+  +  +R K I  +  TMVSV+ A  A   ++++   IHA ++ + FE + +V  
Sbjct: 1231 PNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 1290

Query: 481  ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            +LI MYAKCG + ++  +FD +  +   TWN M+     HG G+ A+++F +M       
Sbjct: 1291 SLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNL 1350

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            +  +F   ++A ++  ++EEG      L    G E  +    A +D+ G+ G +++    
Sbjct: 1351 DQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 1409

Query: 601  IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            + + PI      +  ++ A   H   +   +  + + +L P     HV   ++ +A +
Sbjct: 1410 LPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD--HVTFVSLLSACN 1464



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/560 (29%), Positives = 277/560 (49%), Gaps = 13/560 (2%)

Query: 112  GYAKFASLD-DAVSFLIRMRYDDVAPVVYN-YTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
            G  ++  LD D     ++ ++ D      N   + LK   ++     GK +H   IV   
Sbjct: 716  GSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSV 775

Query: 170  SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            +L +F    ++NMY+K G IE A  +FD M  R+  SW+T+++G+ + G  E A+ L  +
Sbjct: 776  NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 835

Query: 230  MHEEGRRGDFITIVSILPAVANVGSLRI-GKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M   G   +   + S++ A +  G +   G  VHG+ ++ G    V V TALV  Y   G
Sbjct: 836  MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 895

Query: 289  RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
             V  A+ +F+ M   NVVSW S++  Y + GNP E + ++Q+M  +GV     T      
Sbjct: 896  LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTS 955

Query: 349  ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
            +C  L D   G  V   + Q      VS+ NSLISM+S    V+ A  +F  +    ++S
Sbjct: 956  SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 1015

Query: 409  WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
            WNAMI  YA +G   E+L  F  MR  + + +S T+ S++   + +  +++ + IH LV+
Sbjct: 1016 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 1075

Query: 469  RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            +   + NV +   L+ +Y++ G    A  +F  M ER + +WN M+  Y   G     ++
Sbjct: 1076 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 1135

Query: 529  LFNKMLEGPTKPNDITFLCAISACSH-SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            +  ++L+     N +TF  A++ACS+   L+E  I +  +L    G    +    A+V +
Sbjct: 1136 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH--ALIIVAGFHDFLIVGNALVTM 1193

Query: 588  LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG--G 645
             G+ G + EA   +Q MP +P    + A++G     +N E  E  A + ++L  ++G   
Sbjct: 1194 YGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHA--ENEEPNE--AVKAYKLIREKGIPA 1248

Query: 646  YHVLLANIYAAASMWDKLAK 665
             ++ + ++  A S  D L K
Sbjct: 1249 NYITMVSVLGACSAPDDLLK 1268



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 252/483 (52%), Gaps = 2/483 (0%)

Query: 73   LFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
            +FQT  L++++ K+ ++  A  VF+ +  + +A + TML GY +    ++AV    +M  
Sbjct: 779  IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838

Query: 132  DDVAPVVYNYTYLLKVCGDVGEIR-RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
              V P  +    L+  C   G +   G ++HG ++  G   D++  T +V+ Y   G + 
Sbjct: 839  LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 898

Query: 191  EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
             A K+F+ MP+ ++VSW +++ G++ +G     L++  RM +EG  G+  T  ++  +  
Sbjct: 899  NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 958

Query: 251  NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
             +    +G  V G+ ++ GF+  V+V+ +L+ M++    VE A  VFD M   +++SWN+
Sbjct: 959  LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 1018

Query: 311  MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
            MI+AY   G   E++R F  M     E  + T+   L  C+ + +L+ G  +H L+ +L 
Sbjct: 1019 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 1078

Query: 371  LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
            L ++V + N+L+++YS+  + + A  +F  +  + L+SWN+M+  Y Q+G+  + L    
Sbjct: 1079 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 1138

Query: 431  KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
            ++       +  T  S + A +    +  +K +HAL+I + F   + V  AL+ MY K G
Sbjct: 1139 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLG 1198

Query: 491  AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
             +  A+ +   M +    TWN +I G+  +     AV+ +  + E     N IT +  + 
Sbjct: 1199 MMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLG 1258

Query: 551  ACS 553
            ACS
Sbjct: 1259 ACS 1261



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 268/536 (50%), Gaps = 15/536 (2%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P+R+       +L++C   K  ++   I   +I +G        TKL+  + K   +  A
Sbjct: 25  PTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAA 84

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
             VF+ +P++    +  M+ GY++    + A      MR+  V    + Y   L+ C  +
Sbjct: 85  RNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSL 144

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +  G ++ G +    F  +LF  + +V+ ++KCG++E+A  +F  M ERD+VSWN ++
Sbjct: 145 RCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 204

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            G+A  GFA+ +  +   M   G   D  T+ S+L A A  G L I   +HG   + G+ 
Sbjct: 205 GGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG 264

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV-EGGNPEEAMRIFQK 330
           S   V+  L++ YAK G + +A+ +  GM  +++ S  ++I  Y  EG    +A+ +F++
Sbjct: 265 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKE 324

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M    +   +V +   L+ CA+L     G  +H    + +   DV+M N+LI MY+K  +
Sbjct: 325 MNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGE 384

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A   F +++ K ++SW ++I GYA++G  + A++ + KM SK  KP+  T +S++ A
Sbjct: 385 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFA 444

Query: 451 LAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-VT 508
            +   +     +  + +V +   +      + ++D++A+ G +  A  L   ++ +H  +
Sbjct: 445 CSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNAS 504

Query: 509 TWNVMIDG---YGTHGLGK-AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            W  ++     YG   LGK AA  LFN   E     N + ++   S  S +GL ++
Sbjct: 505 LWGAILGASSIYGYMSLGKEAASNLFNMQPE-----NSVNYVVLASIYSAAGLWDD 555



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 257/532 (48%), Gaps = 22/532 (4%)

Query: 52   SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
            +LK  R I  L++K GL         L++L+ +     DA  VF+ + ++    +++M+ 
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122

Query: 112  GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGF 169
             Y +     D +  L  +    +  V+ + T+   L  C +   +   K +H  +IV GF
Sbjct: 1123 CYVQDGKCLDGLKILAELL--QMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 1180

Query: 170  SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
               L     +V MY K G + EA K+   MP+ D V+WN ++ G A+N     A+     
Sbjct: 1181 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 1240

Query: 230  MHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            + E+G   ++IT+VS+L A +     L+ G  +H + +  GF+S   V  +L+ MYAKCG
Sbjct: 1241 IREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCG 1300

Query: 289  RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
             + ++  +FDG+ +++ ++WN+M+AA    G  EEA++IF +M + GV     +    L 
Sbjct: 1301 DLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLA 1360

Query: 349  ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
            A A+L  LE G  +H L+ +L   +D+ +TN+ + MY KC ++     +  +   ++ +S
Sbjct: 1361 ATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 1420

Query: 409  WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-----LAELSVIRYAKWI 463
            WN +I  +A++G   +A   F +M     KPD  T VS++ A     L +  +  Y    
Sbjct: 1421 WNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMT 1480

Query: 464  HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGL 522
                +    E  V     +ID+  + G +  A     +M    +   W  ++     HG 
Sbjct: 1481 REFGVFPGIEHCV----CIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 1536

Query: 523  GKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
             + A +    +LE  P+  +D  ++   + C+ SG  E+      +L+K+ G
Sbjct: 1537 LELARKTAEHLLELDPS--DDSAYVLYSNVCATSGKWED----VENLRKEMG 1582


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/690 (38%), Positives = 400/690 (57%), Gaps = 37/690 (5%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           IH Q+I  G     +A++ ++    +      +  A  +F+ + E +L+ WNT+  G A 
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +     AL L   M   G   +  T   +L + A   + R G+ +HG+ ++ G+D  + V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVS----------------------------- 307
            T+L+ MY + GR+E AR VFD    R+VVS                             
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 308 --WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
             WN+MI+ Y E GN +EA+ +F++M+   V P   T++  + ACA    +E G  VH  
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +D    G+++ + N+LI +Y KC +V+ A  +F  L  K ++SWN +I GY       EA
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC--FEKNVFVMTALI 483
           L  F +M      P+  TM+S++PA A L  I   +WIH  + +            T+LI
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAKCG +  A+ +FD +  R +++WN MI G+  HG   AA ++F++M +   +P+DI
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+  +SACSHSG+++ G H F S+K+DY I P ++HYG M+DLLG +G   EA + I  
Sbjct: 426 TFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M +EP   ++ ++L ACK+H NVELGE  A  L +++P   G +VLL+NIYA A  W+++
Sbjct: 486 MEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV 545

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           AK+R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY  LE +   ++ AG+V
Sbjct: 546 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFV 605

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I KNLRVC +CH ATK I
Sbjct: 606 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 665

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +  REII RD  RFH F++GVCSC DYW
Sbjct: 666 SKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 292/584 (50%), Gaps = 85/584 (14%)

Query: 56  LRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFEPIPDKLDALYHTMLK 111
           LR I   +IK+GL + +   +KL+  FC     ++ L  A  VFE I +    +++TM +
Sbjct: 3   LRMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFR 61

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G+A  +    A+   + M    + P  Y + +LLK C      R G++IHG ++  G+ L
Sbjct: 62  GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121

Query: 172 DLFAMTGVVNMYAKCGQIEEA-------------------------------YKMFDRMP 200
           DL+  T +++MY + G++E+A                                KMFD +P
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +D+VSWN +++G+A+ G  + AL+L   M +   R D  T+VS++ A A   S+ +G+ 
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH +    GF S + +  AL+D+Y KCG VETA  +F+G+  ++V+SWN++I  Y     
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LK-LGTDVSMT 378
            +EA+ +FQ+ML  G  P +VT++  L ACA LG +E G ++H  +++ LK +    S  
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            SLI MY+KC  ++ A  +F  +  ++L SWNAMI G+A +GR N A + F +MR   I+
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD  T V ++ A +                           + ++D+          R +
Sbjct: 422 PDDITFVGLLSACSH--------------------------SGMLDL---------GRHI 446

Query: 499 FDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           F  M E +  T     +  MID  G  GL K A E+ N M     +P+ + +   + AC 
Sbjct: 447 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACK 503

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
             G VE G  Y  +L K   IEP     Y  + ++   AGR NE
Sbjct: 504 MHGNVELGESYAQNLIK---IEPKNPGSYVLLSNIYATAGRWNE 544



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 212/451 (47%), Gaps = 47/451 (10%)

Query: 45  LLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV------- 94
            LL+ C   K  R   +I   ++K G        T L+S++ +   L DA +V       
Sbjct: 93  FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 152

Query: 95  ------------------------FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
                                   F+ IP K    ++ M+ GYA+  +  +A+     M 
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
             +V P       ++  C     I  G+++H  +  +GF  +L  +  ++++Y KCG++E
Sbjct: 213 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 272

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
            A  +F+ +  +D++SWNT++ G+      + AL L   M   G   + +T++SILPA A
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           ++G++ IG+ +H Y +      + N S   T+L+DMYAKCG +E A+ VFD + +R++ S
Sbjct: 333 HLGAIEIGRWIHVY-INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS 391

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLERGIFVHKL 365
           WN+MI  +   G    A  IF +M    +EP ++T +  L AC+  G  DL R IF   +
Sbjct: 392 WNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF-RSM 450

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMILGYAQNGRVNE 424
            +  K+   +     +I +         A ++ + ++ +   V W +++     +G V  
Sbjct: 451 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 510

Query: 425 ALNY---FCKMRSKNIKPDSFTMVSVIPALA 452
             +Y     K+  KN  P S+ ++S I A A
Sbjct: 511 GESYAQNLIKIEPKN--PGSYVLLSNIYATA 539


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/678 (37%), Positives = 400/678 (58%), Gaps = 11/678 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+ C   G   +G ++H   +  GF  DL     +++MY KC +++ A  +FDRM ER+
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++ G+ Q G A+ +L L+  M   G + +  T  + L A   +G +  G  +HG
Sbjct: 70  VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +++GF+ +  V  A +DMY+KCGR+  A  VF+ M  RN+VSWN+MIA +   GN  +
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN---- 379
           ++ +FQ+M  QG  P   T    L AC  LG +  G  +H  L  +  G  +S+ N    
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASL--ITRGFPISIRNIIAS 247

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +++ +Y+KC  +  A  +F +++ K L+SW+A+I G+AQ G + EA++ F ++R      
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV 307

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D F +  ++   A+L+++   K +H  +++     ++ V  ++IDMY KCG    A  LF
Sbjct: 308 DGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLF 367

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M  R+V +W VMI GYG HGLG+ A+ LFN+M     + +++ +L  +SACSHSGL+ 
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIR 427

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           E   YF+ L  ++ ++P ++HY  MVD+LGRAG+L EA + I+ M ++P   ++  +L A
Sbjct: 428 ESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSA 487

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C++H N+E+G +    LF +D D    +V+++NIYA A  W +  +VR +++ KGL+K  
Sbjct: 488 CRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEA 547

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK-AAGYVPDTN-SIHDVEDYVQ 737
           G S VE+  E+H FY G   HP +++I+  L+ +   +K   GY      ++HDVE+  +
Sbjct: 548 GQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESK 607

Query: 738 ENLLSSHSEKLAIAFGLL---NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
           E  L  HSEKLAI   L+       G  I + KNLRVCGDCH   K +S +  +  +VRD
Sbjct: 608 EENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRD 667

Query: 795 MHRFHCFKNGVCSCGDYW 812
            +RFH F++G+CSCGDYW
Sbjct: 668 ANRFHRFEDGLCSCGDYW 685



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 260/503 (51%), Gaps = 23/503 (4%)

Query: 54  KELRRILPLIIKSGLCDQHL----------------FQTKLVSLFCKYNSLSDAARVFEP 97
           + L ++L    K+GL DQ L                    L+ ++ K + +  A  VF+ 
Sbjct: 5   QRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDR 64

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           + ++    +  ++ GY +  +   +++ L  M Y  V P  + ++  LK CG +G +  G
Sbjct: 65  MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            +IHG  + +GF          ++MY+KCG+I  A ++F++MP R+LVSWN ++AG    
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD-SIVN- 275
           G    +L L  RM  +G   D  T  S L A   +G++R G  +H   +  GF  SI N 
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +++A+VD+YAKCG +  A+ VFD ++ +N++SW+++I  + + GN  EAM +F+++ +  
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
                  +   +   ADL  +E+G  +H  + ++  G D+S+ NS+I MY KC   + A 
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAE 364

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +FS++Q + +VSW  MI GY ++G   +A++ F +M+   I+ D    ++++ A +   
Sbjct: 365 RLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG 424

Query: 456 VIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVM 513
           +IR ++ +   L      + N+     ++D+  + G +  A+ L + M  + +   W  +
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTL 484

Query: 514 IDGYGTHG---LGKAAVELFNKM 533
           +     HG   +G+   E+  +M
Sbjct: 485 LSACRVHGNLEIGREVGEILFRM 507


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/662 (39%), Positives = 396/662 (59%), Gaps = 38/662 (5%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G ++ A  +FD++PE DL +W  +++G  Q+GF + A+D+ + +     R D   ++S+ 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A  G L + K +H  A++ GF+  + +  AL+DM+ KC  V  AR VFD M  ++VV
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SW SM   YV  G   + + +F++M   G+   ++T+   L ACAD   L R   VH  +
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGRE--VHGFI 202

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY---------- 416
            + ++  +V ++++L++MY+    + +A  +F  +  + +VSWN M+  Y          
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262

Query: 417 -------------------------AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
                                     QNG+   AL   CKM+   IKP+  T+VS +P  
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
             L  +R  K IH  V R  F ++V + TAL+ +YAKCG +  +R +F+ M  + V  WN
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWN 382

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI     HG G  ++ LFNKML+   +PN +TF+  +S CSHS L +EG+  F S+  +
Sbjct: 383 TMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSE 442

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           + I P  DHY  MVD+L RAGRL EA+DFI+KMPIEP    +GA+LGAC+++KNVELG  
Sbjct: 443 HSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTL 502

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA++LFE++PD  G +VLL+NI   A  W + +++R +M  KGL KTPG S V++KN+V+
Sbjct: 503 AASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVY 562

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
           SF +G   + Q   IY FL+ + ++++  GY P+T+ +  +V+   +E  L SHSE+LA+
Sbjct: 563 SFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAV 622

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFG+LNSS  +T+ + KNLR+CGDCHNA K I+ + G +IIVRD  RFH F++G C+C D
Sbjct: 623 AFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCND 682

Query: 811 YW 812
           +W
Sbjct: 683 FW 684



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 199/407 (48%), Gaps = 37/407 (9%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           KL+        L  A  +F+ IP+     +  ++ G+ +      A+     +   +V P
Sbjct: 16  KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             +    + K C   G++   K+IH   I  GF+ DL     +++M+ KC  +  A  +F
Sbjct: 76  DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D M  +D+VSW ++   +   G     + L   M   G R + +T+ SILPA A+   ++
Sbjct: 136 DDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IK 193

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY- 315
           +G+ VHG+ +R   +  V VS+ALV+MYA    ++ ARLVFD M  R++VSWN M+ AY 
Sbjct: 194 LGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYF 253

Query: 316 ----------------------------------VEGGNPEEAMRIFQKMLDQGVEPTNV 341
                                             ++ G  E A+ I  KM D G++P  +
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           TI+ AL  C +L  L  G  +H  + +     DV++T +L+ +Y+KC  ++ +  +F+ +
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTM 373

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             K +V+WN MI+  + +G+  E+L  F KM    ++P+S T + V+
Sbjct: 374 PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVL 420



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 155/300 (51%), Gaps = 3/300 (1%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           S  L+      G ++ A  +FD +   ++ +W  +I+ + + G P++A+ I+  +L + V
Sbjct: 14  SIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNV 73

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P    ++    ACA  GDL     +H    Q     D+ + N+LI M+ KCK V+ A  
Sbjct: 74  RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +  K +VSW +M   Y   G   + +  F +M    I+ +S T+ S++PA A+   
Sbjct: 134 VFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY-- 191

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           I+  + +H  ++R+  E NV+V +AL++MYA    +  AR +FD M  R + +WNVM+  
Sbjct: 192 IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTA 251

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  +   +  + LF++M +   K N  ++  AIS C  +G  E  +     + +D GI+P
Sbjct: 252 YFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKM-QDSGIKP 310



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 140/337 (41%), Gaps = 58/337 (17%)

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
           A ++  + G  +    + A+  L +M+   + P        L  C ++  +R GKEIHG 
Sbjct: 278 ASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGY 337

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +  + F  D+   T +V +YAKCG +E +  +F+ MP +D+V+WNT++   + +G    +
Sbjct: 338 VFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGES 397

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L L  +M + G   + +T + +L   ++                          + L D 
Sbjct: 398 LILFNKMLDSGVEPNSVTFIGVLSGCSH--------------------------SQLAD- 430

Query: 284 YAKCGRVETARLVFDGMKSRNVVS-----WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
                      LVF+ M S + ++     ++ M+      G  EEA    +KM    +EP
Sbjct: 431 --------EGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKM---PIEP 479

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLK---LGTDVSMTNSLISMYSKCKKVDRAA 395
           T       L AC    ++E G      L +++    G  V ++N L++     KK   A+
Sbjct: 480 TAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVT----AKKWVEAS 535

Query: 396 DI--------FSKLQGKTLVSWNAMILGYAQNGRVNE 424
           +I         +K  G++ V     +  +    + NE
Sbjct: 536 EIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNE 572


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/706 (37%), Positives = 406/706 (57%), Gaps = 40/706 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMP 200
           LL  C  +  +R    IH Q+I  G     +A++ ++    +      +  A  +F+ + 
Sbjct: 8   LLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ 64

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E +L+ WNT+  G A +     AL L   M   G   +  T   +L + A   + R G+ 
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS------------- 307
           +HG+ ++ G+D  + V T+L+ MY + GR+E AR VFD    R+VVS             
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 308 ------------------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                             WN+MI+ Y E GN +EA+ +F++M+   V P   T++  + A
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA    +E G  VH  +D    G+++ + N+LI +Y KC +V+ A  +F  L  K ++SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N +I GY       EAL  F +M      P+  TM+S++PA A L  I   +WIH  + +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364

Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                       T+LIDMYAKCG +  A+ +FD +  R +++WN MI G+  HG   AA 
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ++F++M +   +P+DITF+  +SACSHSG+++ G H F S+K+DY I P ++HYG M+DL
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDL 484

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LG +G   EA + I  M +EP   ++ ++L ACK++ NVELGE  A  L +++P   G +
Sbjct: 485 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSY 544

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIYA A  W+++AK+R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY
Sbjct: 545 VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC +CH ATK IS +  REII RD  RFH F++GVCSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 189/599 (31%), Positives = 300/599 (50%), Gaps = 85/599 (14%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFE 96
           HPS  LL  C +L+ LR I   +IK+GL + +   +KL+  FC     ++ L  A  VFE
Sbjct: 3   HPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFE 61

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            I +    +++TM +G+A  +    A+   + M    + P  Y + +LLK C      R 
Sbjct: 62  TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFRE 121

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA------------------------ 192
           G++IHG ++  G+ LDL+  T +++MY + G++E+A                        
Sbjct: 122 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYAS 181

Query: 193 -------YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
                   KMFD +P +D+VSWN +++G+A+ G  + AL+L   M +   R D  T+VS+
Sbjct: 182 KGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSV 241

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           + A A   S+ +G+ VH +    GF S + +  AL+D+Y KCG VETA  +F+G+  ++V
Sbjct: 242 VSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDV 301

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +SWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L ACA LG +E G ++H  
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVY 361

Query: 366 LDQ-LK-LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           +++ LK +    S   SLI MY+KC  ++ A  +F  +  ++L SWNAMI G+A +GR N
Sbjct: 362 INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 421

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            A + F +MR   I+PD  T V ++ A +                           + ++
Sbjct: 422 AAFDIFSRMRKNEIEPDDITFVGLLSACSH--------------------------SGML 455

Query: 484 DMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
           D+          R +F  M E +  T     +  MID  G  GL K A E+ N M     
Sbjct: 456 DL---------GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM---EM 503

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           +P+ + +   + AC     VE G  Y  +L K   IEP     Y  + ++   AGR NE
Sbjct: 504 EPDGVIWCSLLKACKMYANVELGESYAQNLIK---IEPKNPGSYVLLSNIYATAGRWNE 559


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/673 (38%), Positives = 406/673 (60%), Gaps = 4/673 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL--DLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           LLKV  D   ++ GK IH  LI+   +   ++  +  ++N+YAKC QI  A  +FD M +
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLV-TRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           R++VSW  ++AG+  NG     L L  T +  +  R +     +I+ + ++ G +  G  
Sbjct: 91  RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
            HGYA+++G      V  AL+ MY++   V+ A  V+  +   +V S+N +I   +E G 
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           P EA+ +  +M+D+ +   NVT + A   C+ L DL  G+ VH  + +     D  ++++
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +I MY KC  +  A  +F++LQ K +VSW A++  Y+QNG   EALN+F +M    + P+
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            +T   ++ + A +S + + K +H  + +S FE ++ V  ALI+MY+K G++  A  +F 
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFL 390

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R   TW+ MI G   HGLG+ A+ +F +ML     P+ +TF+  +SAC+H G V+E
Sbjct: 391 EMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQE 450

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G +Y   L K  GIEP ++HY  +V LL +AGRL+EA +F++  P++  +  +  +L AC
Sbjct: 451 GFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSAC 510

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            +H+N  LG+K A  + ++DP + G ++LL+N+YA A  WD + K+R +M ++ ++K PG
Sbjct: 511 HVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPG 570

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E++N +H F S    HP+S +IY  ++ L+  I+  GYVPD  ++ HDVED  +  
Sbjct: 571 ASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKRE 630

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            +S HSEKLAIA+GL+ +  G+ I + KNLR+C DCH+A K IS VT R IIVRD +RFH
Sbjct: 631 YVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFH 690

Query: 800 CFKNGVCSCGDYW 812
           CF +G CSC DYW
Sbjct: 691 CFGDGGCSCADYW 703



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 239/482 (49%), Gaps = 7/482 (1%)

Query: 62  LIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
           LII +     ++ Q   L++L+ K + +  A  +F+ +  +    +  ++ GY     + 
Sbjct: 51  LIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVL 110

Query: 121 DAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           + +  F   +  D + P  Y +  ++  C D G++  G + HG  + +G     +    +
Sbjct: 111 EVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNAL 170

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           + MY++   ++ A  ++  +P  D+ S+N I+ G  +NG+   AL+++ RM +E    D 
Sbjct: 171 ICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDN 230

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T V+     +++  LR+G  VH    R G +    VS+A++DMY KCG +  AR VF+ 
Sbjct: 231 VTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNR 290

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++++NVVSW +++AAY + G  EEA+  F +M   G+ P   T    L++CA +  L  G
Sbjct: 291 LQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHG 350

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  + +      + + N+LI+MYSK   ++ A  +F ++  +  ++W+AMI G + +
Sbjct: 351 KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHH 410

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFV 478
           G   EAL  F +M +    P   T V V+ A A L  ++    +++ L+ ++  E  V  
Sbjct: 411 GLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEH 470

Query: 479 MTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH---GLGKAAVELFNKML 534
            T ++ +  K G +  A         +  V  W  ++     H   GLGK   EL  +M 
Sbjct: 471 YTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMD 530

Query: 535 EG 536
            G
Sbjct: 531 PG 532


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/674 (38%), Positives = 398/674 (59%), Gaps = 5/674 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           LL+   +   + +  ++H  +   G    + +  T +   YA CG +  A  +FD++  +
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           +   WN+++ G+A N     AL L  +M   G++ D  T   +L A  ++    +G+ VH
Sbjct: 88  NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
              +  G +  V V  +++ MY K G VE AR+VFD M  R++ SWN+M++ +V+ G   
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS---MTN 379
            A  +F  M   G      T++  L AC D+ DL+ G  +H  + +      V    + N
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           S+I MY  C+ V  A  +F  L+ K +VSWN++I GY + G   +AL  F +M      P
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  T++SV+ A  ++S +R    + + V++  +  NV V TALI MYA CG++  A  +F
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVF 387

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M E+++    VM+ G+G HG G+ A+ +F +ML     P++  F   +SACSHSGLV+
Sbjct: 388 DEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVD 447

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F  + +DY +EP   HY  +VDLLGRAG L+EA+  I+ M ++P   V+ A+L A
Sbjct: 448 EGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C++H+NV+L   +A +LFEL+PD    +V L+NIYAA   W+ +  VR ++ K+ L+K P
Sbjct: 508 CRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPP 567

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
             S VEL   VH F+ G T H QS  IY  L+ L +++K AGY PDT+ + +DVE+ ++E
Sbjct: 568 SYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKE 627

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +L  HSE+LA+AF L+N+ PG+TI I KNLRVCGDCH   K IS +T REII+RD+ RF
Sbjct: 628 KMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRF 687

Query: 799 HCFKNGVCSCGDYW 812
           H F++G+CSCG YW
Sbjct: 688 HHFRDGLCSCGGYW 701



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 257/499 (51%), Gaps = 9/499 (1%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LL+  T+ K L + L L   +   G   ++ +  TKL + +     +  A  +F+ I  K
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              L+++M++GYA   S   A+   ++M +    P  + Y ++LK CGD+     G+++H
Sbjct: 88  NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             ++V G   D++    +++MY K G +E A  +FDRM  RDL SWNT+++GF +NG A 
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN---VST 278
            A ++   M  +G  GD  T++++L A  +V  L++GK +HGY +R G    V    +  
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +++DMY  C  V  AR +F+G++ ++VVSWNS+I+ Y + G+  +A+ +F +M+  G  P
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT++  L AC  +  L  G  V   + +     +V +  +LI MY+ C  +  A  +F
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVF 387

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  K L +   M+ G+  +GR  EA++ F +M  K + PD     +V+ A +   ++ 
Sbjct: 388 DEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVD 447

Query: 459 YAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDG 516
             K I   + R    E      + L+D+  + G +  A A+ + M  + +   W  ++  
Sbjct: 448 EGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507

Query: 517 YGTHGLGKAAVELFNKMLE 535
              H   K AV    K+ E
Sbjct: 508 CRLHRNVKLAVISAQKLFE 526


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/773 (35%), Positives = 439/773 (56%), Gaps = 18/773 (2%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L  C  L+ +R+I   I  SG    ++F   ++V  + K  S++ A   F+ I  K D  
Sbjct: 34  LRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + +ML  YA+      A+    RM   D+ P    YT +L  C  +  +  GK IH ++ 
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148

Query: 166 -VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
              G  LD+     ++ MYAKCG +E+A ++F+RM  R + SWN ++A +AQ+G  E A+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            L   M  E       T  S+L A +N+G L  G+ +H      G +  +++  AL+ MY
Sbjct: 209 RLYEDMDVEP---SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 265

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A+C  ++ A  +F  +  R+VVSW++MIAA+ E    +EA+  + KM  +GV P   T  
Sbjct: 266 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 325

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQ 402
             L ACA +GDL  G  VH  +  L  G  +++ N  +L+ +Y+    +D A  +F +++
Sbjct: 326 SVLLACASVGDLRAGRAVHDQI--LGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS-VIPALAELSVIRYAK 461
            +    W  +I GY++ G     L  + +M++    P +  + S VI A A L     A+
Sbjct: 384 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 443

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             H+ +       +  + T+L++MY++ G + +AR +FD M+ R    W  +I GY  HG
Sbjct: 444 QAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 503

Query: 522 LGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
               A+ L+ +M LEG  +P+++TF+  + ACSH+GL E+G   F S++ DY + P + H
Sbjct: 504 EHGLALGLYKEMELEG-AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAH 562

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  ++DLL RAGRL++A + I  MP+EP    + ++LGA +IHK+V+    AA ++ +LD
Sbjct: 563 YSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLD 622

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P +   +VLL+N++A       +A VR  M  +G++K  G S +E+ +++H F  G   H
Sbjct: 623 PVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSH 682

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
           P+ + I+  L+ L  +IK AGYVP++  + HDV +  +E LL  HSEKLAIAFGL+ ++P
Sbjct: 683 PRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAP 742

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+T+ I   LR+C DCH+A K+IS +  REIIVRD  RFH F++G CSCGDYW
Sbjct: 743 GTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/778 (35%), Positives = 439/778 (56%), Gaps = 16/778 (2%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++  TSL + R+I   +I+SG  D       L+ ++ +  S  DA  + + +P +  
Sbjct: 19  ARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNA 78

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ +++  A+      ++ F  RM  D   P    +  L+K  G + E   G+ +   
Sbjct: 79  VSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE---GEIVQDF 135

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
              +GF       T ++ MY +CG+++ A   FDR+ ER +VSWN ++  +++    E +
Sbjct: 136 AKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDSIVNVSTALV 281
           L +   M  +G   + +TI+ I  AVA + +     G  +H  ++ +G  S+  V+ +++
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSII 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +++ + G +  A  +F+ +  R+V SWN+MIAA+ + G+  EA+ ++ +M    + P  V
Sbjct: 256 NLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGV 312

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T +  L AC    DLERG  +H+        +D+ +  +L+SMY +C ++DRAA++F+ +
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA- 460
           Q   +++ NA+I  +AQ GR + +L +F +M    I+P  FT+V+V+ A A       A 
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 461 ----KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
               +W+ A     C   ++ V  AL++MYAKCG +  AR +FD   + +V+TWN ++ G
Sbjct: 433 RDLHRWM-AECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAG 491

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  HG    AV L  +M      P+ I+F  A+SA SH+  VE+G   F ++ +DYG+ P
Sbjct: 492 YAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIP 551

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYGA+VDLLGRAG L EA  F++ M I      + A+LGAC+IHK+ +   +AA  +
Sbjct: 552 SVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAI 611

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
             +DP  G  + +L+N+Y+AA  WD+  ++R  M + G +K PG S +E+KN VH F   
Sbjct: 612 VAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVK 671

Query: 697 STKHPQSKRIYTFLETLIDEIKA-AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
              HP++  IY  L+ L   +K+   YVPD  S+ HDVED  +ENLL  HSEKLA+ FGL
Sbjct: 672 DRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGL 731

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +  GS I I KNLR+C DCH   K  S  T REI+VRD +RFH F  G CSC D W
Sbjct: 732 IGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 224/417 (53%), Gaps = 8/417 (1%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           A  V ++  L ++  +   + +G++IH ++I +G+   LF    +++MYA+     +A  
Sbjct: 9   AAPVDSWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAEL 68

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           + DRMP R+ VSWN ++   AQ G    +L    RM ++G   D +  +S++ A    G+
Sbjct: 69  LLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGT 125

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           ++ G+ V  +A ++GFD    V TAL+ MY +CGR++ A+  FD ++ R VVSWN++I  
Sbjct: 126 IQEGEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITV 185

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD--LERGIFVHKLLDQLKLG 372
           Y  G   E+++R+F++ML QG+ P  VTI+    A A +       G  +H       L 
Sbjct: 186 YSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLI 245

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +  ++ NS+I+++ +   + RA +IF K+  + + SWN MI  +A+NG V EAL+ + +M
Sbjct: 246 SVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM 305

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
               I+PD  T V+V+ A      +   + IH       ++ ++ V TAL+ MY +CG +
Sbjct: 306 ---TIRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRL 362

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             A  +F  +    V T N +I  +   G    ++  F +ML+   +P+  T +  +
Sbjct: 363 DRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/674 (38%), Positives = 390/674 (57%), Gaps = 41/674 (6%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LL +    G++R  + +  +++      D+F+   +++ YAK G I+     FDRMP
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKML----KRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD VS+NT +AGF+ N   + +L+L  RM  EG      TIVSIL A A +  LR GK 
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  +   F   V +  AL DMYAKCG +E AR +FD +  +N+VSWN MI+ Y + G 
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           PE+ + +  +M   G  P  VT+                                   ++
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTM-----------------------------------ST 261

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +I+ Y +C +VD A  +FS+ + K +V W AM++GYA+NGR  +AL  F +M  ++I+PD
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S+T+ SV+ + A+L+ + + + +H   I +    N+ V +ALIDMY+KCG +  AR++F+
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           +M  R+V +WN MI G   +G  K A+ELF  ML+   KP+++TF+  +SAC H   +E+
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQ 441

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF S+   +G+ P +DHY  MV+LLGR GR+ +A   I+ M  +P   ++  +L  C
Sbjct: 442 GQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSIC 501

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
               ++   E AA  LFELDP     +++L+N+YA+   W  +A VR +M+ K ++K  G
Sbjct: 502 STKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAG 561

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E+ NEVH F S    HP+S+ IY  L  LI +++  G+ P+TN + HDV +  +  
Sbjct: 562 FSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFK 621

Query: 740 LLSSHSEKLAIAFGLLNSSPG-STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +  HSEKLA+AFGL+    G S I I KN+R+C DCH   K+ S + GR+II+RD +RF
Sbjct: 622 SICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRF 681

Query: 799 HCFKNGVCSCGDYW 812
           H F  G CSC D W
Sbjct: 682 HHFSTGKCSCNDNW 695



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 225/446 (50%), Gaps = 37/446 (8%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S + K  S+ +    F+ +P +    Y+T + G++  +   +++    RM+ +   P 
Sbjct: 95  LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y    +L     + ++R GK+IHG +IV  F  ++F    + +MYAKCG+IE+A  +FD
Sbjct: 155 EYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD 214

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            + +++LVSWN +++G+A+NG  E  + L+ +M   G   D +T+ +I+ A         
Sbjct: 215 CLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------- 265

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                     Y +CGRV+ AR VF   K +++V W +M+  Y +
Sbjct: 266 --------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAK 299

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E+A+ +F +ML + +EP + T+   + +CA L  L  G  VH       L  ++ +
Sbjct: 300 NGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +++LI MYSKC  +D A  +F+ +  + +VSWNAMI+G AQNG   +AL  F  M  +  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 438 KPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           KPD+ T + ++ A    + I   + +  ++  +      +     ++++  + G +  A 
Sbjct: 420 KPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 497 ALF-DMMNERHVTTWNVMIDGYGTHG 521
           AL  +M ++     W+ ++    T G
Sbjct: 480 ALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 21/274 (7%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           SG     +  + +++ +C+   + +A RVF    +K    +  M+ GYAK    +DA+  
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M  + + P  Y  + ++  C  +  +  G+ +HG+ I+ G + +L   + +++MY+K
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG I++A  +F+ MP R++VSWN ++ G AQNG  + AL+L   M ++  + D +T + I
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYA-------KCGRVETARLV 296
           L A  +   +  G+          FDSI N    T  +D YA       + GR+E A  +
Sbjct: 430 LSACLHCNWIEQGQEY--------FDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL 481

Query: 297 FDGM-KSRNVVSWNSMIAAYVEGG---NPEEAMR 326
              M    + + W+++++     G   N E A R
Sbjct: 482 IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAAR 515



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I +GL +  L  + L+ ++ K   + DA  VF  +P +    ++ M+ G A+     DA+
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDAL 408

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNM 182
                M      P    +  +L  C     I +G+E    +   +G +  L     +VN+
Sbjct: 409 ELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNL 468

Query: 183 YAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
             + G+IE+A  +   M  + D + W+T+++
Sbjct: 469 LGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/783 (36%), Positives = 423/783 (54%), Gaps = 88/783 (11%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           R+ P +I+S          K ++   +   ++DA R+F  +P +  + Y+ ML GY+   
Sbjct: 33  RLEPEVIRS---------NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
            L  A S    +      P  Y+Y  LL        +   + +  ++ V     D     
Sbjct: 84  RLPLAASLFRAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYN 135

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++ +A  G +  A   FD  PE+D VSWN ++A + +NG  E A  L     E     
Sbjct: 136 VMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----W 191

Query: 238 DFITIVSILPAVANVGSLRIGKA----------------VHGYAMRAG-------FDSI- 273
           D I+  +++      G +   +                 V GYA R         FD+  
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251

Query: 274 ---VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
              V   TA+V  YA+ G +E AR VFD M  RN VSWN+M+AAY++           ++
Sbjct: 252 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ-----------RR 300

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+D+  E  N      +  C                       +V+  N++++ Y++   
Sbjct: 301 MMDEAKELFN------MMPC----------------------RNVASWNTMLTGYAQAGM 332

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A  +F  +  K  VSW AM+  Y+Q G   E L  F +M       +      V+  
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A+++ +     +H  +IR+ +    FV  AL+ MY KCG +  AR  F+ M ER V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI GY  HG GK A+E+F+ M    TKP+DIT +  ++ACSHSGLVE+GI YF S+  
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+G+    +HY  M+DLLGRAGRL EA D ++ MP EP  T++GA+LGA +IH+N ELG 
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA ++FEL+P+  G +VLL+NIYA++  W    K+R +ME++G++K PG S +E++N+V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H+F +G   HP+ ++IY FLE L   +K AGYV  T+ + HDVE+  +E++L  HSEKLA
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLA 692

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +A+G+LN  PG  I + KNLRVCGDCHNA KYIS + GR I++RD +RFH F+ G CSCG
Sbjct: 693 VAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCG 752

Query: 810 DYW 812
           DYW
Sbjct: 753 DYW 755


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/754 (35%), Positives = 432/754 (57%), Gaps = 15/754 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L++K+GL +       LVS +  +  +SDA ++F+ +P++    +++M++    F+   D
Sbjct: 212 LVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIR---VFSDNGD 268

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
             +F+      DVA VV     +L VC    EI  GK +HG  +      +L     +++
Sbjct: 269 DGAFM-----PDVATVVT----VLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMD 319

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDF 239
           MY+K G I ++  +F     +++VSWNT+V GF+  G      DL+ +M    E  + D 
Sbjct: 320 MYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADE 379

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +TI++ +P   +   L   K +H Y+++  F     ++ A V  YAKCG +  A+ VF G
Sbjct: 380 VTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHG 439

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++S+ + SWN++I  Y +  +P  ++    +M + G+ P N T+   L AC+ L  L  G
Sbjct: 440 IRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLG 499

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH  + +  L  D+ +  S++S+Y  C ++     +F  ++  +LVSWN +I G+ QN
Sbjct: 500 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQN 559

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G    AL  F +M    I+P   +M++V  A + L  +R  +  HA  ++   E N F+ 
Sbjct: 560 GFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIA 619

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            ++IDMYAK GA+  +  +F+ + E+   +WN MI GYG HG  K A++LF +M      
Sbjct: 620 CSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRN 679

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+D+TFL  ++AC+HSGL+ EG+ Y   +K  +G++P + HY  ++D+LGRAG+L+ A  
Sbjct: 680 PDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR 739

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
              +M  EP + ++ ++L  C+IH+N+E+GEK A +LF L+P++   +VLL+N+YA    
Sbjct: 740 VAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGK 799

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD + +VR  M++  L+K  GCS +EL  +V SF  G       + I +    L  +I  
Sbjct: 800 WDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWK 859

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GY PDT+S+ HD+ +  +   L  HSEKLAI +GL+ +S G+T+ + KNLR+C DCHNA
Sbjct: 860 MGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNA 919

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K IS V  REI+VRD  RFH F  G CSCGDYW
Sbjct: 920 AKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 194/370 (52%), Gaps = 11/370 (2%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           V  SLKEL       +K       L     V+ + K  SLS A RVF  I  K    ++ 
Sbjct: 394 VLPSLKELH---CYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNA 450

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++ GYA+ +    ++   ++M+   + P  +    LL  C  +  +R GKE+HG +I N 
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 510

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
              DLF    V+++Y  CG++     +FD M +  LVSWNT++ G  QNGF E AL L  
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           +M   G +   I+++++  A + + SLR+G+  H YA++   +    ++ +++DMYAK G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            +  +  VF+G+K ++  SWN+MI  Y   G  +EA+++F++M   G  P ++T +  L 
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLT 690

Query: 349 ACADLGDLERGIFVHKLLDQLK----LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
           AC   G L  G+   + LDQ+K    L  ++     +I M  +  ++D A  + +++  +
Sbjct: 691 ACNHSGLLHEGL---RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747

Query: 405 TLVS-WNAMI 413
             V  WN+++
Sbjct: 748 PDVGIWNSLL 757


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/783 (36%), Positives = 423/783 (54%), Gaps = 88/783 (11%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           R+ P +I+S          K ++   +   ++DA R+F  +P +  + Y+ ML GY+   
Sbjct: 33  RLEPEVIRS---------NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
            L  A S    +      P  Y+Y  LL        +   + +  ++ V     D     
Sbjct: 84  RLPLAASLFRAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYN 135

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++ +A  G +  A   FD  PE+D VSWN ++A + +NG  E A  L     E     
Sbjct: 136 VMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----W 191

Query: 238 DFITIVSILPAVANVGSLRIGKA----------------VHGYAMRAG-------FDSI- 273
           D I+  +++      G +   +                 V GYA R         FD+  
Sbjct: 192 DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251

Query: 274 ---VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
              V   TA+V  YA+ G +E AR VFD M  RN VSWN+M+AAY++           ++
Sbjct: 252 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ-----------RR 300

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+D+  E  N      +  C                       +V+  N++++ Y++   
Sbjct: 301 MMDEAKELFN------MMPC----------------------RNVASWNTMLTGYAQAGM 332

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A  +F  +  K  VSW AM+  Y+Q G   E L  F +M       +      V+  
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A+++ +     +H  +IR+ +    FV  AL+ MY KCG +  AR  F+ M ER V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI GY  HG GK A+E+F+ M    TKP+DIT +  ++ACSHSGLVE+GI YF S+  
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+G+    +HY  M+DLLGRAGRL EA D ++ MP EP  T++GA+LGA +IH+N ELG 
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA ++FEL+P+  G +VLL+NIYA++  W    K+R +ME++G++K PG S +E++N+V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H+F +G   HP+ ++IY FLE L   +K AGYV  T+ + HDVE+  +E++L  HSEKLA
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLA 692

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +A+G+LN  PG  I + KNLRVCGDCHNA KYIS + GR I++RD +RFH F+ G CSCG
Sbjct: 693 VAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCG 752

Query: 810 DYW 812
           DYW
Sbjct: 753 DYW 755


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/709 (37%), Positives = 402/709 (56%), Gaps = 43/709 (6%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY--KMFDRMPE 201
           LL  C D+  +   K+IH  +I +G    LFA + ++   A     + +Y   +F  +  
Sbjct: 31  LLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHH 87

Query: 202 R--DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           +  ++  WNT++   +       +L L ++M   G   +  T  S+  + A   +    K
Sbjct: 88  QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAK 147

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG-------------------- 299
            +H +A++       +V T+L+ MY++ G +  ARLVFD                     
Sbjct: 148 QLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEG 207

Query: 300 -----------MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
                      + +++VVSWN+MIA YV+ G  EEA+  F +M +  V P   T++  L 
Sbjct: 208 HVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLS 267

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           AC  L  LE G ++   +     G ++ + N+L+ MYSKC ++  A  +F  ++ K ++ 
Sbjct: 268 ACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVIL 327

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN MI GY       EAL  F  M  +N+ P+  T ++V+PA A L  +   KW+HA + 
Sbjct: 328 WNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYID 387

Query: 469 RSCFE----KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           ++        NV + T++I MYAKCG V  A  +F  M  R + +WN MI G   +G  +
Sbjct: 388 KNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAE 447

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+ LF +M+    +P+DITF+  +SAC+ +G VE G  YF+S+ KDYGI P + HYG M
Sbjct: 448 RALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCM 507

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           +DLL R+G+ +EA   +  M +EP   ++G++L AC+IH  VE GE  A RLFEL+P+  
Sbjct: 508 IDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENS 567

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           G +VLL+NIYA A  WD +AK+RT +  KG++K PGC+ +E+   VH F  G   HPQS+
Sbjct: 568 GAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSE 627

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I+  L+ +   ++  G+VPDT+ + +D+++  +E  L+ HSEKLAIAFGL+++ PGSTI
Sbjct: 628 NIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTI 687

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLRVC +CH+ATK IS +  REII RD +RFH FK+G CSC D W
Sbjct: 688 RIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 260/524 (49%), Gaps = 45/524 (8%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN---SLSDAARVFEP 97
           HP   LL  C  +  L++I  LIIKSGL +    Q+KL+  FC  +    LS A  +F  
Sbjct: 26  HPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIE-FCALSPSRDLSYALSLFHS 84

Query: 98  I---PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           I   P  +  +++T+++ ++   +   ++    +M +  + P  + +  L K C      
Sbjct: 85  IHHQPPNI-FIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKAT 143

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ-------------------------- 188
              K++H   +     L     T +++MY++ G+                          
Sbjct: 144 HEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGY 203

Query: 189 -----IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                +++A ++FD +P +D+VSWN ++AG+ Q+G  E AL   TRM E     +  T+V
Sbjct: 204 VSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMV 263

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L A  ++ SL +GK +  +    GF   + +  ALVDMY+KCG + TAR +FDGM+ +
Sbjct: 264 SVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +V+ WN+MI  Y      EEA+ +F+ ML + V P +VT +  L ACA LG L+ G +VH
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVH 383

Query: 364 KLLDQLKLGT----DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +D+   GT    +VS+  S+I MY+KC  V+ A  +F  +  ++L SWNAMI G A N
Sbjct: 384 AYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMN 443

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFV 478
           G    AL  F +M ++  +PD  T V V+ A  +   +    ++  ++         +  
Sbjct: 444 GHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQH 503

Query: 479 MTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
              +ID+ A+ G    A+ L  +M  E     W  +++    HG
Sbjct: 504 YGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 210/401 (52%), Gaps = 12/401 (2%)

Query: 10  SVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLC 69
           S+F +   ++  HE K   +    +   ++ H    L+ + + + ELR    +  KS L 
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D   F T L++ +     + DA R+F+ IP K    ++ M+ GY +    ++A++   RM
Sbjct: 192 DAVSF-TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM 250

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           +  DV+P       +L  CG +  +  GK I   +   GF  +L  +  +V+MY+KCG+I
Sbjct: 251 QEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEI 310

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
             A K+FD M ++D++ WNT++ G+      E AL L   M  E    + +T +++LPA 
Sbjct: 311 GTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370

Query: 250 ANVGSLRIGKAVHGYAMR--AGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNV 305
           A++G+L +GK VH Y  +   G  ++ NVS  T+++ MYAKCG VE A  VF  M SR++
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
            SWN+MI+     G+ E A+ +F++M+++G +P ++T +  L AC   G +E G   H+ 
Sbjct: 431 ASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG---HRY 487

Query: 366 LDQLK----LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
              +     +   +     +I + ++  K D A  +   ++
Sbjct: 488 FSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME 528


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/698 (37%), Positives = 394/698 (56%), Gaps = 67/698 (9%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           M+AK G++ +A  +F  MPERD VSW  +V G  + G    A+  +  M  +G      T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD--- 298
           + ++L + A   +  +G+ VH + ++ G  S V V+ ++++MY KCG  ETA  VF+   
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 299 ----------------------------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
                                        M  R++VSWN+MIA Y + G   +A+++F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 331 ML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           ML +  + P   TI   L ACA+LG++  G  VH  + + ++  +  +TN+LIS Y+K  
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 390 KVDRAA---------------------------------DIFSKLQGKTLVSWNAMILGY 416
            V+ A                                  ++F  +  + +V+W AMI+GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QNGR +EA++ F  M +   +P+S+T+ +V+   A L+ + Y K IH   IRS  E++ 
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLE 535
            V  A+I MYA+ G+   AR +FD +  R  T TW  MI     HG G+ AV LF +ML 
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +P+ IT++  +SACSH+G V EG  Y+  +K ++ I P M HY  MVDLL RAG  +
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           EA +FI++MP+EP    +G++L AC++HKN EL E AA +L  +DP+  G +  +AN+Y+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
           A   W   A++    ++K ++K  G S   +++++H F +    HPQ   +Y     + +
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600

Query: 716 EIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
           EIK AG+VPD  S+ HDV+D ++E LLS HSEKLAIAFGL+++   +T+ + KNLRVC D
Sbjct: 601 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 660

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH A K IS VT REIIVRD  RFH F++G+CSC DYW
Sbjct: 661 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 250/591 (42%), Gaps = 117/591 (19%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           +F K   L+DA  VF  +P++    +  M+ G  +     +A+  L+ M  D   P  + 
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-- 198
            T +L  C        G+++H  ++  G    +     V+NMY KCG  E A  +F+R  
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 199 -----------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
                                        MP+R +VSWN ++AG+ QNG    AL L +R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 230 M-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M HE     D  TI S+L A AN+G++RIGK VH Y +R        V+ AL+  YAK G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 289 RVETARLVFDG---------------------------------MKSRNVVSWNSMIAAY 315
            VE AR + D                                  M +R+VV+W +MI  Y
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  +EA+ +F+ M+  G EP + T+   L  CA L  L+ G  +H    +  L    
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           S++N++I+MY++      A  +F ++   K  ++W +MI+  AQ+G+  EA+  F +M  
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             ++PD  T V V+ A +           HA                        G V  
Sbjct: 421 AGVEPDRITYVGVLSACS-----------HA------------------------GFVNE 445

Query: 495 ARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
            +  +D +   H     ++ +  M+D     GL   A E   +M   P +P+ I +   +
Sbjct: 446 GKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLL 502

Query: 550 SAC---SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           SAC    ++ L E       S+  +         Y A+ ++    GR ++A
Sbjct: 503 SACRVHKNAELAELAAEKLLSIDPNNS-----GAYSAIANVYSACGRWSDA 548



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 38/328 (11%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAP 136
           +VSL      +  A  +FE +PD+    ++ M+ GY +      A+    RM ++  +AP
Sbjct: 130 MVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP 189

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQL----------IVNGF----------------- 169
             +  T +L  C ++G +R GK++H  +          + N                   
Sbjct: 190 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 249

Query: 170 ------SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
                  L++ + T ++  Y K G +E A +MF  M  RD+V+W  ++ G+ QNG  + A
Sbjct: 250 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 309

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +DL   M   G   +  T+ ++L   A++  L  GK +H  A+R+  +   +VS A++ M
Sbjct: 310 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITM 369

Query: 284 YAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           YA+ G    AR +FD +  R   ++W SMI A  + G  EEA+ +F++ML  GVEP  +T
Sbjct: 370 YARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRIT 429

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLK 370
            +  L AC+  G +  G    +  DQ+K
Sbjct: 430 YVGVLSACSHAGFVNEG---KRYYDQIK 454



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 136/322 (42%), Gaps = 27/322 (8%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S++  RRI+   +++ L    +  T L+  + K   +  A  +F  + ++    +  M+ 
Sbjct: 241 SVENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    D+A+     M      P  Y    +L VC  +  +  GK+IH + I +    
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRM 230
                  ++ MYA+ G    A +MFD++  R + ++W +++   AQ+G  E A+ L   M
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---------TALV 281
              G   D IT V +L A ++ G +  GK          +D I N             +V
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRY--------YDQIKNEHQIAPEMSHYACMV 470

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           D+ A+ G    A+     M    + ++W S+++A     N E A    +K+L   ++P N
Sbjct: 471 DLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL--SIDPNN 528

Query: 341 VTIMEAL----HACADLGDLER 358
                A+     AC    D  R
Sbjct: 529 SGAYSAIANVYSACGRWSDAAR 550


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/655 (39%), Positives = 390/655 (59%), Gaps = 34/655 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ + E +L+ WNT+  G A N  +  AL L   M   G   +  +   +L + A 
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE-------------------- 291
             +L  G+ +HG+ ++ G+D  + V+T+L+ MYA+ GR+E                    
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 292 -----------TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
                       AR +FD +  ++VVSWN+MI+ YVE  N +EA+ +++ M+   V+P  
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T++  + ACA  G +E G  +H  ++    G+++ + N LI +YSKC +V+ A  +F  
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K ++SWN +I G+       EAL  F +M      P+  TM+SV+PA A L  I   
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317

Query: 461 KWIHALVIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +WIH  + +          ++T+LIDMYAKCG +  A+ +FD M  R +++WN MI G+ 
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFA 377

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG   AA +LF+KM +    P+DITF+  +SACSHSG+++ G H F S+ +DY I P +
Sbjct: 378 MHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKL 437

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HYG M+DLLG  G   EA + I+ MP+EP   ++ ++L ACK+H NVELGE  A  L +
Sbjct: 438 EHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK 497

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           ++P+  G +VLL+NIYA A  WD++AK+RT++  KG++K PGCS +E+ + VH F  G  
Sbjct: 498 IEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDK 557

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+++ IY  LE +   ++  G+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++
Sbjct: 558 FHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 617

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            PG+ + I KNLRVC +CH ATK IS +  REII RD  R H  K+GV SC DYW
Sbjct: 618 KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/559 (29%), Positives = 277/559 (49%), Gaps = 84/559 (15%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ LS A  +FE I +    +++TM +G+A  +    A+   + M    + P  Y++ +L
Sbjct: 12  FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-- 202
           LK C     +  G++IHG ++  G+ LD++  T +++MYA+ G++E+A+K+FDR   R  
Sbjct: 72  LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131

Query: 203 -----------------------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                                        D+VSWN +++G+ +    + AL+L   M + 
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             + D  T+V+++ A A  GS+ +G+ +H +    GF S + +   L+D+Y+KCG VETA
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F G+  ++V+SWN++I  +      +EA+ +FQ+ML  G  P +VT++  L ACA L
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311

Query: 354 GDLERGIFVHKLLDQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           G ++ G ++H  +++ LK  T+  S+  SLI MY+KC  ++ A  +F  +  ++L SWNA
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI G+A +G+ N A + F KMR   I PD  T V ++ A +                   
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSH------------------ 413

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAA 526
                             G +   R +F  M++ +  T     +  MID  G  GL K A
Sbjct: 414 -----------------SGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEA 456

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMV 585
            E+   M   P +P+ + +   + AC     VE G  Y  +L K   IEP     Y  + 
Sbjct: 457 KEMIRTM---PMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK---IEPENPGSYVLLS 510

Query: 586 DLLGRAGRLNEAWDFIQKM 604
           ++   AGR    WD + K+
Sbjct: 511 NIYATAGR----WDQVAKI 525



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 203/402 (50%), Gaps = 16/402 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++ +     +++A ++F+ I  K    ++ M+ GY +  +  +A+     M   +V 
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       ++  C   G I  G+++H  +  +GF  ++  +  ++++Y+KCG++E A  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  + ++D++SWNT++ G       + AL L   M   G   + +T++S+LPA A++G++
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 256 RIGKAVHGYAMR--AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            IG+ +H Y  +   G  +  ++ T+L+DMYAKCG +E A+ VFD M +R++ SWN+MI 
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLG 372
            +   G    A  +F KM   G++P ++T +  L AC+  G L+ G  + + + Q  K+ 
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL-VSWNAMILGYAQNGRVNEALNY--- 428
             +     +I +   C     A ++   +  +   V W +++     +  V    +Y   
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQN 494

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
             K+  +N  P S+ ++S I A A        +W     IR+
Sbjct: 495 LIKIEPEN--PGSYVLLSNIYATA-------GRWDQVAKIRT 527



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 22/238 (9%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           G+ +     T L+ ++ K   +  A +VF+ +  +  + ++ M+ G+A     + A    
Sbjct: 330 GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLF 389

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAK 185
            +MR + + P    +  LL  C   G +  G+ I   +  +   +  L     ++++   
Sbjct: 390 SKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGH 449

Query: 186 CGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           CG  +EA +M   MP E D V W +++     +   EL       +            + 
Sbjct: 450 CGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNL------------IK 497

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK----CGRVETARLVFD 298
           I P   N GS  +   ++  A R  +D +  + T L D   K    C  +E   +V +
Sbjct: 498 IEP--ENPGSYVLLSNIYATAGR--WDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHE 551


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/772 (35%), Positives = 429/772 (55%), Gaps = 10/772 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L+VC  L +    R++    +KSG  +     T LV ++ K     D   +F+ +  K  
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             + ++L GYA+    D+ +  + +M+ + V P  + +  +L    D   I  G ++H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++ NGF    F    ++ MY K   + +A  +FD M  RD V+WN ++ G+A  GF    
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             +  RM   G +       + L   +    L   K +H   ++ G++   ++ TAL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 284 YAKCGRVETARLVFD-GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           Y+KC  V+ A  +F     + NVV+W +MI  +V+  N E+A+ +F +M  +GV P + T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFT 410

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L A      L +   +H  + +       S+  +L+  Y K   V  +A +F  + 
Sbjct: 411 YSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE-LSVIRYAK 461
            K +V+W+AM+ G AQ     +A+  F ++  + +KP+ +T  SVI A +   + + + K
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA  ++S     + V +AL+ MY+K G + +A  +F    ER + +WN MI GYG HG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             K A+E+F  M       +D+TF+  ++AC+H+GLVEEG  YF  + KDY I+  ++HY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY 646

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDL  RAG  ++A D I  MP     T++  +L AC++H+N+ELG+ AA +L  L P
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           ++   +VLL+NI+A A  W++ A VR +M+++ ++K  GCS +E+KN + SF +G   HP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            S  +Y  LE L  ++K  GY PDTN + HDVE+  +E +LS HSE+LAIA+GL+   PG
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I I KNLR+CGDCHN  + ISL+  R +IVRD +RFH FK GVCSCG YW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 288/614 (46%), Gaps = 51/614 (8%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+  P K  + Y+ +L  +++     +A+     +    +       +  LKVCG 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   G+++H Q + +GF  D+   T +V+MY K    E+   +FD M  +++VSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++G+A+NG  +  + L+ +M  EG   +  T  ++L A+A+   +  G  VH   ++ GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           +    V  AL+ MY K   V  A  VFD M  R+ V+WN MI  Y   G   E  ++F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVH--KLLDQLKLGTDVSMTNSLISMYSKC 388
           M   GV+ +      AL  C+   +L     +H   + +  +   D+    +L+  YSKC
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR--TALMVTYSKC 354

Query: 389 KKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
             VD A  +FS       +V+W AMI G+ QN    +A++ FC+M  + ++P+ FT  +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +              +HA +I++ +EK   V TAL+D Y K G V  +  +F  +  + +
Sbjct: 415 LAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS-GLVEEG--IH- 563
             W+ M+ G       + A+E+F ++++   KPN+ TF   I+ACS S   VE G  IH 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 564 ----------------YFTSLKKDYGIEPV-----------MDHYGAMVDLLGRAGRLNE 596
                             T   K   IE             +  + +M+   G+ G   +
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 597 AWDFIQKM-----PIEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGGYHV 648
           A +  Q M     P++     F  +L AC     VE GEK  N +   + +D     Y  
Sbjct: 591 ALEVFQIMQNQGLPLDD--VTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSC 648

Query: 649 LLANIYAAASMWDK 662
           ++ ++Y+ A M+DK
Sbjct: 649 MV-DLYSRAGMFDK 661



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 175/370 (47%), Gaps = 13/370 (3%)

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           R   A  +FD    +++  +N ++  +    +  EA+ +F+ +   G+    +T+  AL 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 349 ACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
            C  L D   G  VH     LK G   DVS+  SL+ MY K +  +    IF ++  K +
Sbjct: 113 VCGVLFDQVVGRQVH--CQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSW +++ GYA+NG  +E ++   +M+ + + P+ FT  +V+ ALA+ S+I     +HA+
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           ++++ FE   FV  ALI MY K   VG A A+FD M  R   TWN+MI GY   G     
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            ++F++M     K +   F  A+  CS    +         + K+ G E   D   A++ 
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMV 349

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-----P 641
              +   ++EA+           +  + AM+G    + N    EKA +   ++      P
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN---NEKAVDLFCQMSREGVRP 406

Query: 642 DEGGYHVLLA 651
           +   Y  +LA
Sbjct: 407 NHFTYSTVLA 416


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/775 (34%), Positives = 442/775 (57%), Gaps = 39/775 (5%)

Query: 76   TKLVSLFCK--YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
            T L+S + K  Y  ++ A  VF+ +  + +A + TML GY +    ++AV    +M    
Sbjct: 310  TSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 369

Query: 134  VAPVVYNYTYLLKVCGDVGEIR-RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
            V P  +    L+  C   G +   G ++HG ++  G   D++  T +V+ Y   G +  A
Sbjct: 370  VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 429

Query: 193  YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             K+F+ MP+ ++VSW +++ G++ +G     L++  RM +EG  G+  T  ++  +   +
Sbjct: 430  QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 489

Query: 253  GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
                +G  V G+ ++ GF+  V+V+ +L+ M++    VE A  VFD M   +++SWN+MI
Sbjct: 490  EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 549

Query: 313  AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            +AY   G   E++R F  M     E  + T+   L  C+ + +L+ G  +H L+ +L L 
Sbjct: 550  SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 609

Query: 373  TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV---------- 422
            ++V + N+L+++YS+  + + A  +F  +  + L+SWN+M+  Y Q+G+           
Sbjct: 610  SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 669

Query: 423  ------------------------NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
                                    NEA+  +  +R K I  +  TMVS + A A L+V+ 
Sbjct: 670  LQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLE 728

Query: 459  YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
              + +H LVI+  FE ++ V  A +DMY KCG +     +      R   +WN++I  + 
Sbjct: 729  EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFA 788

Query: 519  THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
             HG  + A E F++ML+   KP+ +TF+  +SAC+H GLV+EG+ Y+ S+ +++G+ P +
Sbjct: 789  RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 848

Query: 579  DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            +H   ++DLLGR+GRL+ A  FI++MP+ P    + ++L AC+IH N+EL  K A  L E
Sbjct: 849  EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE 908

Query: 639  LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
            LDP +   +VL +N+ A +  W+ +  +R  M    ++K P CS V+LK++VHSF  G  
Sbjct: 909  LDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEK 968

Query: 699  KHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
             HPQ+ RI   L  L+   K AGYVPDT+ ++HD+++  +E  L +HSE+LA+AFGL+N+
Sbjct: 969  YHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINT 1028

Query: 758  SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
               ST+ I KNLRVCGDCH+  K++S + GR+I++RD +RFH F  G CSCGDYW
Sbjct: 1029 PESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 163/695 (23%), Positives = 294/695 (42%), Gaps = 118/695 (16%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV    K   + DA+ +F  + ++    ++ M+ GYA     DD+      M    + P 
Sbjct: 133 LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 192

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHG--------------QLIVNGFS------------- 170
            Y    +L+   + G +    +IHG               L++N ++             
Sbjct: 193 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 252

Query: 171 ----LDLFAMT----------------GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
                DLF+ T                 +++MYAK G+IE+A + FD M E++++SW ++
Sbjct: 253 GMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 312

Query: 211 VAGFAQNGFA---------------------------------ELALDLVTRMHEEGRRG 237
           ++G+A++G+                                  E A+ L  +M   G   
Sbjct: 313 ISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEP 372

Query: 238 DFITIVSILPAVANVGSLRI-GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
           +   + S++ A +  G +   G  VHG+ ++ G    V V TALV  Y   G V  A+ +
Sbjct: 373 NGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKL 432

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+ M   NVVSW S++  Y + GNP E + ++Q+M  +GV     T      +C  L D 
Sbjct: 433 FEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ 492

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  V   + Q      VS+ NSLISM+S    V+ A  +F  +    ++SWNAMI  Y
Sbjct: 493 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAY 552

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
           A +G   E+L  F  MR  + + +S T+ S++   + +  +++ + IH LV++   + NV
Sbjct: 553 AHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV 612

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG--------------L 522
            +   L+ +Y++ G    A  +F  M ER + +WN M+  Y   G              +
Sbjct: 613 CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM 672

Query: 523 GKAAVELFNKMLEGPTK-------------------PNDITFLCAISACSHSGLVEEGIH 563
           GK     +N ++ G  +                   P +   + +++A ++  ++EEG  
Sbjct: 673 GKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEG-Q 731

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
               L    G E  +    A +D+ G+ G +++    + + PI      +  ++ A   H
Sbjct: 732 QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARH 790

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
              +   +  + + +L P     HV   ++ +A +
Sbjct: 791 GCFQKARETFHEMLKLGPKPD--HVTFVSLLSACN 823



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 180/731 (24%), Positives = 305/731 (41%), Gaps = 137/731 (18%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P+R+       +L++C   K  ++   I   +I +G        TKL+  + K   +  A
Sbjct: 25  PTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAA 84

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
             VF+ +P++    +  M+ GY++    + A      MR+                CG  
Sbjct: 85  RNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH----------------CG-- 126

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
                                + A   +V+ ++KCG++E+A  +F  M ERD+VSWN ++
Sbjct: 127 ---------------------VKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 165

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            G+A  GFA+ +  +   M   G   D  T+ S+L A A  G L I   +HG   + G+ 
Sbjct: 166 GGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG 225

Query: 272 S-----------------------------------------------IVNVSTALVDMY 284
           S                                               I  +  AL+DMY
Sbjct: 226 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMY 285

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNS---------------------------------M 311
           AK G +E A+  FD M+ +NV+SW S                                 M
Sbjct: 286 AKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTM 345

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL-ERGIFVHKLLDQLK 370
           ++ YV  G  EEA+ +F +M   GVEP    +   + AC+  G + + G  VH  + +  
Sbjct: 346 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 405

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +  DV +  +L+  Y     V  A  +F ++    +VSW ++++GY+ +G   E LN + 
Sbjct: 406 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 465

Query: 431 KMRSKNI--KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           +MR + +    ++F  V+    L E  V+ Y    H  +I+  FE +V V  +LI M++ 
Sbjct: 466 RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGH--IIQYGFEDSVSVANSLISMFSS 523

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
             +V  A  +FD MNE  + +WN MI  Y  HGL + ++  F+ M     + N  T    
Sbjct: 524 FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSL 583

Query: 549 ISACSHSGLVE--EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
           +S CS    ++   GIH    L    G++  +     ++ L   AGR  +A    Q M  
Sbjct: 584 LSVCSSVDNLKWGRGIH---GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM-T 639

Query: 607 EPGITVFGAMLGACKIHKNVEL-GEKAANRLFEL-DPDEGGYHVLLANIYAAASMWDKLA 664
           E  +  + +M+ AC +     L G K    L ++  PD   ++ L+   +A     ++  
Sbjct: 640 ERDLISWNSMM-ACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGG-HAENEEPNEAV 697

Query: 665 KVRTIMEKKGL 675
           K   ++ +KG+
Sbjct: 698 KAYKLIREKGI 708



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 257/556 (46%), Gaps = 50/556 (8%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           ++   ++K+G+       T LV  +     + +A ++FE +PD     + +++ GY+   
Sbjct: 396 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 455

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           +  + ++   RMR + V+     +  +   CG + +   G ++ G +I  GF   +    
Sbjct: 456 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 515

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++M++    +EEA  +FD M E D++SWN +++ +A +G    +L     M       
Sbjct: 516 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 575

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           +  T+ S+L   ++V +L+ G+ +HG  ++ G DS V +   L+ +Y++ GR E A LVF
Sbjct: 576 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 635

Query: 298 DGMKSRNVVSWNSMIAAYVEGG----------------------------------NPEE 323
             M  R+++SWNSM+A YV+ G                                   P E
Sbjct: 636 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNE 695

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A++ ++ + ++G+ P N   M +L A A+L  LE G  +H L+ +L   +D+ +TN+ + 
Sbjct: 696 AVKAYKLIREKGI-PANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 754

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC ++     +  +   ++ +SWN +I  +A++G   +A   F +M     KPD  T
Sbjct: 755 MYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVT 814

Query: 444 MVSVIPA-----LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            VS++ A     L +  +  Y        +    E  V     +ID+  + G +  A   
Sbjct: 815 FVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCV----CIIDLLGRSGRLSHAEGF 870

Query: 499 F-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
             +M    +   W  ++     HG  + A +    +LE     +D  ++   + C+ SG 
Sbjct: 871 IKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE-LDPSDDSAYVLYSNVCATSGK 929

Query: 558 VEEGIHYFTSLKKDYG 573
            E+      +L+K+ G
Sbjct: 930 WED----VENLRKEMG 941


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/687 (37%), Positives = 402/687 (58%), Gaps = 14/687 (2%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYK 194
           P  + +  +LK C  +G +  G+  H   I  G +  D++    ++  YA+ G +++A +
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVG 253
           +FD MP RD+V+WN++V G+  NG   LAL     MHE    + D + I++ L A     
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  G+ VH Y +R G +  V V T+++DMY KCG + +A  VF  M SR VV+WN MI 
Sbjct: 226 ALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIG 285

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y     PEEA   F +M  +G +   VT +  L ACA       G  VH  + + +   
Sbjct: 286 GYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLP 345

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            V +  +L+ MYSK  KV  +  +F ++  KTLVSWN MI  Y       EA+  F  + 
Sbjct: 346 HVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLL 405

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           ++ + PD FTM +V+PA   L ++R  + +H+ +IR  + +N  +M A++ MYA+CG V 
Sbjct: 406 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVL 465

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           ++R +FD M  + V +WN MI GY  HG G++A+E+F++M     +PN+ TF+  ++ACS
Sbjct: 466 SSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
            SGL +EG   F S+++DYG+ P ++HYG M DLLGRAG L E   FI+ MPI+P   V+
Sbjct: 526 VSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVW 585

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDE-----GGYHVLLANIYAAASMWDKLAKVRT 668
           G++L A +   ++++ E AA R+F+L+ D+      G +VL++++YA A  W  + ++++
Sbjct: 586 GSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKS 645

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY---TFLETLIDEIKAAGYVPD 725
           +ME+KGL++T   S+VEL     SF +G T HPQSK I     FL   I E++      D
Sbjct: 646 LMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMNQSD 705

Query: 726 TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
             S+ D     + N    HS +LA+ FGL+++   + I ++KN+R+C DCH+A K IS  
Sbjct: 706 PTSL-DSRRTTEPN---KHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKY 761

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +GR I+V D + +H F +G C CGDYW
Sbjct: 762 SGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 227/428 (53%), Gaps = 23/428 (5%)

Query: 37  RIYRHPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAA 92
           R  R    ++L+ C    +L E R      I+ G+    ++    L++ + +   + DA 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 93  RVFEPIPDKLDALYHTMLKGYAK----------FASLDDAVSFLIRMRYDDVAPVVYNYT 142
           RVF+ +P +    +++M+ GY            F  + +A    + +++D V  +     
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEA----LEVQHDGVGIIA---- 216

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
             L  C     + +G+E+H  +I +G   D+   T +++MY KCG I  A  +F  MP R
Sbjct: 217 -ALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSR 275

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
            +V+WN ++ G+A N   E A D   +M  EG + + +T +++L A A   S   G++VH
Sbjct: 276 TVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVH 335

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           GY  R  F   V + TAL++MY+K G+V+++  VF  M ++ +VSWN+MIAAY+      
Sbjct: 336 GYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYM 395

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ +F  +L+Q + P   T+   + A   LG L +   +H  + +L  G +  + N+++
Sbjct: 396 EAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIM 455

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY++C  V  + +IF K+  K ++SWN MI+GYA +G+   AL  F +M+   ++P+  
Sbjct: 456 HMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNES 515

Query: 443 TMVSVIPA 450
           T VSV+ A
Sbjct: 516 TFVSVLTA 523



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 222/445 (49%), Gaps = 8/445 (1%)

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           +A  G++++A +       RD    N ++ G A  G    AL     M   G R D  T 
Sbjct: 52  HAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTF 111

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSI-VNVSTALVDMYAKCGRVETARLVFDGMK 301
             +L   A +G+L  G+A H  A+R G  +  V    +L+  YA+ G V+ A  VFDGM 
Sbjct: 112 PVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMP 171

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGI 360
           +R+VV+WNSM+  YV  G    A+  F++M +   V+   V I+ AL AC     L +G 
Sbjct: 172 ARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGR 231

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH  + +  +  DV +  S++ MY KC  +  A  +F+ +  +T+V+WN MI GYA N 
Sbjct: 232 EVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNE 291

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           R  EA + F +M+++  + +  T ++++ A A+     Y + +H  + R  F  +V + T
Sbjct: 292 RPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLET 351

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL++MY+K G V ++  +F  M  + + +WN MI  Y    +   A+ LF  +L  P  P
Sbjct: 352 ALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYP 411

Query: 541 NDITFLCAISACSHSGLVEE--GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +  T    + A    GL+ +   +H +  ++  YG   ++    A++ +  R G +  + 
Sbjct: 412 DYFTMSAVVPAFVLLGLLRQCRQMHSYI-IRLGYGENTLI--MNAIMHMYARCGDVLSSR 468

Query: 599 DFIQKMPIEPGITVFGAMLGACKIH 623
           +   KM  +  I+ +  M+    IH
Sbjct: 469 EIFDKMAAKDVIS-WNTMIMGYAIH 492



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 155/309 (50%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           ++L + R +   +I+ G+       T ++ ++CK   ++ A  VF  +P +    ++ M+
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GYA     ++A    ++M+ +     V     LL  C        G+ +HG +    F 
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +   T ++ MY+K G+++ + K+F +M  + LVSWN ++A +        A+ L   +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +    D+ T+ +++PA   +G LR  + +H Y +R G+     +  A++ MYA+CG V
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            ++R +FD M +++V+SWN+MI  Y   G    A+ +F +M   G+ P   T +  L AC
Sbjct: 465 LSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524

Query: 351 ADLGDLERG 359
           +  G  + G
Sbjct: 525 SVSGLTDEG 533



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 4/252 (1%)

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           T SL+  ++   ++D A +  +    +     N +I G A  G    AL  +  M +   
Sbjct: 45  TKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGA 104

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +PD FT   V+   A L  +   +  H+  IR      +V+   +L+  YA+ G V  A 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND-ITFLCAISACSHS 555
            +FD M  R V TWN M+DGY ++GLG  A+  F +M E     +D +  + A++AC   
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
             + +G      + + +G+E  +    +++D+  + G +  A      MP    +T +  
Sbjct: 225 SALMQGREVHAYVIR-HGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVT-WNC 282

Query: 616 MLGACKIHKNVE 627
           M+G   +++  E
Sbjct: 283 MIGGYALNERPE 294


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 286/771 (37%), Positives = 446/771 (57%), Gaps = 14/771 (1%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            L  L ++L  I KS         + LVS F +Y  +  A  +FE + D+     + ++ G
Sbjct: 266  LTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVG 325

Query: 113  YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI----RRGKEIHGQLIVNG 168
             A+    ++A      M+ D V     +Y  LL    +   +    R+G+E+H  LI N 
Sbjct: 326  LARQHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA 384

Query: 169  FSLDLFAMTG--VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
              +D++ + G  +VN+YAKC  I+ A  +F  MP +D VSWN+I++G   N   E A+  
Sbjct: 385  L-VDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVAC 443

Query: 227  VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
               M   G      +++S L + A++G + +G+ +HG  ++ G D  V+VS AL+ +YA+
Sbjct: 444  FHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAE 503

Query: 287  CGRVETARLVFDGMKSRNVVSWNSMIAAYVEG-GNPEEAMRIFQKMLDQGVEPTNVTIME 345
               +E  + VF  M   + VSWNS I A      +  +A++ F +M+  G +P  VT + 
Sbjct: 504  TDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFIN 563

Query: 346  ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGK 404
             L A + L  LE G  +H L+ +  +  D ++ N+L++ Y KC++++    IFS++ + +
Sbjct: 564  ILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERR 623

Query: 405  TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
              VSWNAMI GY  NG +++A+     M  K  + D FT+ +V+ A A ++ +     +H
Sbjct: 624  DEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVH 683

Query: 465  ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            A  IR+C E  V V +AL+DMYAKCG +  A   F++M  R++ +WN MI GY  HG G 
Sbjct: 684  ACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGG 743

Query: 525  AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
             A++LF +M +    P+ +TF+  +SACSH GLV+EG  +F S+ + Y + P ++H+  M
Sbjct: 744  KALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCM 803

Query: 585  VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNVELGEKAANRLFELDPD 642
            VDLLGRAG + +  +FI+ MP+ P   ++  +LGAC     +N ELG +AA  L EL+P 
Sbjct: 804  VDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPL 863

Query: 643  EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
                +VLL+N++AA   W+ + + R  M    ++K  GCS V +K+ VH F +G   HP+
Sbjct: 864  NAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPE 923

Query: 703  SKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
             ++IY  L+ ++++++  GYVP+T  +++D+E   +E LLS HSEKLAIAF L   S   
Sbjct: 924  KEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-L 982

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLRVCGDCH A KYIS +  R+II+RD +RFH F  G+CSC DYW
Sbjct: 983  PIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 249/500 (49%), Gaps = 18/500 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I K+GL     +   LV++F +  +L  A ++F+ +P K    +  ++ GYA+    D+A
Sbjct: 65  IYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEA 124

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVV 180
                 +    + P  Y     L+ C ++G   ++ G EIHG +  + ++ D+     ++
Sbjct: 125 CMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLM 184

Query: 181 NMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD- 238
           +MY+ C   I++A ++F+ +  +   SWN+I++ + + G A  A  L + M  E    + 
Sbjct: 185 SMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNC 244

Query: 239 ------FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                 F ++V++  ++ + G L + + +     ++ F   + V +ALV  +A+ G +++
Sbjct: 245 RPNEYTFCSLVTVACSLVDCG-LTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDS 303

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+++F+ M  RN V+ N ++         EEA +IF++M D  VE    +    L A  +
Sbjct: 304 AKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTE 362

Query: 353 LGDLE----RGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
             +L+    +G  VH  L+    +   + + N+L+++Y+KC  +D A  IF  +  K  V
Sbjct: 363 FSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTV 422

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SWN++I G   N R  EA+  F  MR   + P  F+++S + + A L  I   + IH   
Sbjct: 423 SWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEG 482

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK-AA 526
           I+   + +V V  AL+ +YA+   +   + +F +M E    +WN  I    T       A
Sbjct: 483 IKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQA 542

Query: 527 VELFNKMLEGPTKPNDITFL 546
           ++ F +M++   KPN +TF+
Sbjct: 543 IKYFLEMMQAGWKPNRVTFI 562



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 215/426 (50%), Gaps = 15/426 (3%)

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           D   +    ++H Q+   G + D+F    +VN++ + G +  A K+FD MP+++LVSW+ 
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMR 267
           +V+G+AQNG  + A  L   +   G   +   I S L A   +G   L++G  +HG   +
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170

Query: 268 AGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           + + S + +S  L+ MY+ C   ++ AR VF+ +K +   SWNS+I+ Y   G+   A +
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230

Query: 327 IFQKMLDQGVE----PTNVTIMEALHACADLGDLERGIFVHKL--LDQLKLGTDVSMTNS 380
           +F  M  +  E    P   T    +     L D    +    L  +++     D+ + ++
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+S +++   +D A  IF ++  +  V+ N +++G A+  +  EA   F +M+   ++ +
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEIN 349

Query: 441 SFTMVSVIPALAELSVI----RYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVGTA 495
           + +   ++ A  E S +    R  + +HA +IR+   +  + +  AL+++YAKC A+  A
Sbjct: 350 ASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNA 409

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R++F +M  +   +WN +I G   +   + AV  F+ M      P+  + +  +S+C+  
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469

Query: 556 GLVEEG 561
           G +  G
Sbjct: 470 GWIMLG 475



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 194/366 (53%), Gaps = 18/366 (4%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    + G  S V     LV+++ + G + +A+ +FD M  +N+VSW+ +++ Y + G 
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGM 120

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD--LERGIFVHKLLDQLKLGTDVSMT 378
           P+EA  +F+ ++  G+ P +  I  AL AC +LG   L+ G+ +H L+ +    +D+ ++
Sbjct: 121 PDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLS 180

Query: 379 NSLISMYSKCK-KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-- 435
           N L+SMYS C   +D A  +F +++ KT  SWN++I  Y + G    A   F  M+ +  
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240

Query: 436 --NIKPDSFTMVSVIPALAEL--SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
             N +P+ +T  S++     L    +   + + A + +S F K+++V +AL+  +A+ G 
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGL 300

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           + +A+ +F+ M++R+  T N ++ G      G+ A ++F +M +   + N  ++   +SA
Sbjct: 301 IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSA 359

Query: 552 CSHSGLVEEG------IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
            +    ++EG      +H +  L ++  ++  +    A+V+L  +   ++ A    Q MP
Sbjct: 360 FTEFSNLKEGKRKGQEVHAY--LIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP 417

Query: 606 IEPGIT 611
            +  ++
Sbjct: 418 SKDTVS 423


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/772 (34%), Positives = 427/772 (55%), Gaps = 50/772 (6%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +C    + DA  +FE +P++    +  M+ GY +  +   A     +M  + + P 
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-CGQIEEAYKMF 196
             N+   L     +G +   + +    +  GF  D+   T ++N+Y++    ++ A K F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           + M ER+  +W+T++A  +  G     +D    ++E           +++  +A  G  R
Sbjct: 284 ESMIERNEYTWSTMIAALSHGG----RIDAAIAVYERDPVKSIACRTALITGLAQCG--R 337

Query: 257 IGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           I  A      R  F+ I    V    AL+  Y + G V  A+ +FD M  RN +SW  MI
Sbjct: 338 IDDA------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           A Y + G  EEA+ + Q++   G+ P+  ++     AC+++  LE G  VH L  ++   
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            +    N+LI+MY KC+ ++ A  +FS++  K +VSWN+ +    QN  ++EA N F  M
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511

Query: 433 RSKNIK-------------------------------PDSFTMVSVIPALAELSVIRYAK 461
            S++                                 P+S  +  ++     L   +  +
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH + I+   +  + V  ALI MY KCG    +R +FD+M ER + TWN +I GY  HG
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHG 630

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           LG+ A++++  M      PN++TF+  ++ACSH+GLV+EG  +F S+ +DYG+ P+ +HY
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLLGR G +  A  FI  MPIEP   ++ A+LGACKIHKN E+G++AA +LF ++P
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              G +V+L+NIY++  MW ++A+VR IM+++G+ K PGCS  ++K+++HSF +G  +H 
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHE 810

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q + I   LE L   +KA GYVPDT  + HD+++  +E+ L  HSEKLA+A+ LL +  G
Sbjct: 811 QIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKG 870

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLR+CGDCH   K++S VT R+I +RD +RFH F+NG CSC D+W
Sbjct: 871 MPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 238/494 (48%), Gaps = 25/494 (5%)

Query: 78  LVSLFCKYNSLSDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           ++S +C +N + DAAR +++ I          +L GY +   + +A      M   +   
Sbjct: 71  MISAYC-HNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT-- 127

Query: 137 VVYNYTYLLKV-CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           V +N      V  GD+   RR       L     S D+ +   ++  Y    Q+ +A  +
Sbjct: 128 VAWNAMISCYVQNGDITMARR-------LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNL 180

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F++MPER+LVSW  +++G+ +      A D+  +MH EG   D     S L AV  +G+L
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNL 240

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAA 314
            + +++   A++ GF+  V + TA++++Y++   V +TA   F+ M  RN  +W++MIAA
Sbjct: 241 DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
              GG  + A+ ++++   + +      ++  L  C  + D         L +Q+     
Sbjct: 301 LSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDD------ARILFEQIPEPIV 353

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS  N+LI+ Y +   V+ A ++F K+  +  +SW  MI GYAQNGR  EAL    ++  
Sbjct: 354 VSW-NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             + P   ++ S+  A + +  +     +H+L ++   + N F   ALI MY KC  +  
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +F  M  + + +WN  +     + L   A   F+ ML      +D+++   ISA +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISAYAH 528

Query: 555 SGLVEEGIHYFTSL 568
           +    E +  F ++
Sbjct: 529 AEQSNEAMGAFKTM 542



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 238/514 (46%), Gaps = 46/514 (8%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA-RVFEPIPDKLDALYHTML 110
           +L  L  +  L +K+G     +  T +++++ +  S+ D A + FE + ++ +  + TM+
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI 298

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
              +    +D A++   R     +A      T L + CG + + R   E   + IV    
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ-CGRIDDARILFEQIPEPIV---- 353

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
               +   ++  Y + G + EA ++FD+MP R+ +SW  ++AG+AQNG +E AL L+  +
Sbjct: 354 ---VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           H  G      ++ SI  A +N+ +L  G  VH  A++ G         AL+ MY KC  +
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-----------------D 333
           E AR VF  M ++++VSWNS +AA V+    +EA   F  ML                 +
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAE 530

Query: 334 QGVE--------------PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           Q  E              P +  +   L  C  LG  + G  +H +  +L + +++ + N
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVAN 590

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LISMY KC   D +  IF  ++ + + +WN +I GYAQ+G   EA+  +  M S  + P
Sbjct: 591 ALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLP 649

Query: 440 DSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAV-GTARA 497
           +  T V ++ A +   ++    K+  ++               ++D+  + G V G  + 
Sbjct: 650 NEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQF 709

Query: 498 LFDMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           ++DM  E     W+ ++     H    +GK A E
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 206/465 (44%), Gaps = 101/465 (21%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           +  HG+L V+G S  +  +        + G++ EA ++FD MP RD+++WN++++ +  N
Sbjct: 26  RHAHGELEVSGCSARIRDL-------GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  + A DL                                 A+ G  MR G        
Sbjct: 79  GMPDAARDLY-------------------------------DAISGGNMRTG-------- 99

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             L+  Y + GRV  AR VFDGM  RN V+WN+MI+ YV+ G+   A R+F  M      
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM------ 153

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P+                                  DVS  NS+++ Y    ++  A ++
Sbjct: 154 PSR---------------------------------DVSSWNSMLTGYCHSLQMVDARNL 180

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F K+  + LVSW  MI GY +     +A + FCKM  + + PD     S + A+  L  +
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNL 240

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV-GTARALFDMMNERHVTTWNVMIDG 516
              + +  L +++ FE++V + TA++++Y++  +V  TA   F+ M ER+  TW+ MI  
Sbjct: 241 DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCA---ISACSHSGLVEEGIHYFTSLKKDYG 573
               G   AA+ ++ +    P K    +  C    I+  +  G +++    F  +     
Sbjct: 301 LSHGGRIDAAIAVYER---DPVK----SIACRTALITGLAQCGRIDDARILFEQIP---- 349

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            EP++  + A++    + G +NEA +   KMP    I+  G + G
Sbjct: 350 -EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 25/202 (12%)

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +A I    + G VG AR +FD M  R +  WN MI  Y  +G+  AA +L++ +  G  +
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
              I     +S     G V E    F  +     +E     + AM+    + G +  A  
Sbjct: 98  TGAIL----LSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARR 148

Query: 600 FIQKMPIEPGITVFGAML-GACKIHKNVELGEKAANRLFELDPDEG--GYHVLLAN---I 653
               MP    ++ + +ML G C   + V+     A  LFE  P+     + V+++    I
Sbjct: 149 LFDAMP-SRDVSSWNSMLTGYCHSLQMVD-----ARNLFEKMPERNLVSWTVMISGYGRI 202

Query: 654 YAAASMWDKLAKVRTIMEKKGL 675
                 WD   K    M ++GL
Sbjct: 203 ENHGKAWDIFCK----MHREGL 220


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/772 (34%), Positives = 427/772 (55%), Gaps = 50/772 (6%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +C    + DA  +FE +P++    +  M+ GY +  +   A     +M  + + P 
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-CGQIEEAYKMF 196
             N+   L     +G +   + +    +  GF  D+   T ++N+Y++    ++ A K F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           + M ER+  +W+T++A  +  G     +D    ++E           +++  +A  G  R
Sbjct: 284 ESMIERNEYTWSTMIAALSHGG----RIDAAIAVYERDPVKSIACRTALITGLAQCG--R 337

Query: 257 IGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           I  A      R  F+ I    V    AL+  Y + G V  A+ +FD M  RN +SW  MI
Sbjct: 338 IDDA------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           A Y + G  EEA+ + Q++   G+ P+  ++     AC+++  LE G  VH L  ++   
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            +    N+LI+MY KC+ ++ A  +FS++  K +VSWN+ +    QN  ++EA N F  M
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511

Query: 433 RSKNIK-------------------------------PDSFTMVSVIPALAELSVIRYAK 461
            S++                                 P+S  +  ++     L   +  +
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH + I+   +  + V  ALI MY KCG    +R +FD+M ER + TWN +I GY  HG
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHG 630

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           LG+ A++++  M      PN++TF+  ++ACSH+GLV+EG  +F S+ +DYG+ P+ +HY
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLLGR G +  A  FI  MPIEP   ++ A+LGACKIHKN E+G++AA +LF ++P
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              G +V+L+NIY++  MW ++A+VR IM+++G+ K PGCS  ++K+++HSF +G  +H 
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHE 810

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q + I   LE L   +KA GYVPDT  + HD+++  +E+ L  HSEKLA+A+ LL +  G
Sbjct: 811 QIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKG 870

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I I KNLR+CGDCH   K++S VT R+I +RD +RFH F+NG CSC D+W
Sbjct: 871 MPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 238/494 (48%), Gaps = 25/494 (5%)

Query: 78  LVSLFCKYNSLSDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           ++S +C +N + DAAR +++ I          +L GY +   + +A      M   +   
Sbjct: 71  MISAYC-HNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT-- 127

Query: 137 VVYNYTYLLKV-CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           V +N      V  GD+   RR       L     S D+ +   ++  Y    Q+ +A  +
Sbjct: 128 VAWNAMISCYVQNGDITMARR-------LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNL 180

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F++MPER+LVSW  +++G+ +      A D+  +MH EG   D     S L AV  +G+L
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNL 240

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAA 314
            + +++   A++ GF+  V + TA++++Y++   V +TA   F+ M  RN  +W++MIAA
Sbjct: 241 DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
              GG  + A+ ++++   + +      ++  L  C  + D         L +Q+     
Sbjct: 301 LSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDD------ARILFEQIPEPIV 353

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS  N+LI+ Y +   V+ A ++F K+  +  +SW  MI GYAQNGR  EAL    ++  
Sbjct: 354 VSW-NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             + P   ++ S+  A + +  +     +H+L ++   + N F   ALI MY KC  +  
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +F  M  + + +WN  +     + L   A   F+ ML      +D+++   ISA +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISAYAH 528

Query: 555 SGLVEEGIHYFTSL 568
           +    E +  F ++
Sbjct: 529 AEQSNEAMGAFKTM 542



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 238/514 (46%), Gaps = 46/514 (8%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA-RVFEPIPDKLDALYHTML 110
           +L  L  +  L +K+G     +  T +++++ +  S+ D A + FE + ++ +  + TM+
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMI 298

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
              +    +D A++   R     +A      T L + CG + + R   E   + IV    
Sbjct: 299 AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ-CGRIDDARILFEQIPEPIV---- 353

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
               +   ++  Y + G + EA ++FD+MP R+ +SW  ++AG+AQNG +E AL L+  +
Sbjct: 354 ---VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           H  G      ++ SI  A +N+ +L  G  VH  A++ G         AL+ MY KC  +
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-----------------D 333
           E AR VF  M ++++VSWNS +AA V+    +EA   F  ML                 +
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAE 530

Query: 334 QGVE--------------PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           Q  E              P +  +   L  C  LG  + G  +H +  +L + +++ + N
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVAN 590

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LISMY KC   D +  IF  ++ + + +WN +I GYAQ+G   EA+  +  M S  + P
Sbjct: 591 ALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLP 649

Query: 440 DSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAV-GTARA 497
           +  T V ++ A +   ++    K+  ++               ++D+  + G V G  + 
Sbjct: 650 NEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQF 709

Query: 498 LFDMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           ++DM  E     W+ ++     H    +GK A E
Sbjct: 710 IYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 206/465 (44%), Gaps = 101/465 (21%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           +  HG+L V+G S  +  +        + G++ EA ++FD MP RD+++WN++++ +  N
Sbjct: 26  RHAHGELEVSGCSARIRDL-------GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  + A DL                                 A+ G  MR G        
Sbjct: 79  GMPDAARDLY-------------------------------DAISGGNMRTG-------- 99

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             L+  Y + GRV  AR VFDGM  RN V+WN+MI+ YV+ G+   A R+F  M      
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM------ 153

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P+                                  DVS  NS+++ Y    ++  A ++
Sbjct: 154 PSR---------------------------------DVSSWNSMLTGYCHSLQMVDARNL 180

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F K+  + LVSW  MI GY +     +A + FCKM  + + PD     S + A+  L  +
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNL 240

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV-GTARALFDMMNERHVTTWNVMIDG 516
              + +  L +++ FE++V + TA++++Y++  +V  TA   F+ M ER+  TW+ MI  
Sbjct: 241 DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCA---ISACSHSGLVEEGIHYFTSLKKDYG 573
               G   AA+ ++ +    P K    +  C    I+  +  G +++    F  +     
Sbjct: 301 LSHGGRIDAAIAVYER---DPVK----SIACRTALITGLAQCGRIDDARILFEQIP---- 349

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            EP++  + A++    + G +NEA +   KMP    I+  G + G
Sbjct: 350 -EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 25/202 (12%)

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +A I    + G VG AR +FD M  R +  WN MI  Y  +G+  AA +L++ +  G  +
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
              I     +S     G V E    F  +     +E     + AM+    + G +  A  
Sbjct: 98  TGAIL----LSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARR 148

Query: 600 FIQKMPIEPGITVFGAML-GACKIHKNVELGEKAANRLFELDPDEG--GYHVLLAN---I 653
               MP    ++ + +ML G C   + V+     A  LFE  P+     + V+++    I
Sbjct: 149 LFDAMP-SRDVSSWNSMLTGYCHSLQMVD-----ARNLFEKMPERNLVSWTVMISGYGRI 202

Query: 654 YAAASMWDKLAKVRTIMEKKGL 675
                 WD   K    M ++GL
Sbjct: 203 ENHGKAWDIFCK----MHREGL 220


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/730 (36%), Positives = 415/730 (56%), Gaps = 11/730 (1%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           + DA       PD    L++ +++G+A     + A++    M      P  + +  ++K 
Sbjct: 59  MHDALAAVRSSPDAF--LHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKC 116

Query: 148 CGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
           C  +G +  G+  H   I  G    +++    ++  YAK G + +A ++FD MP RD+V+
Sbjct: 117 CARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVT 176

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           WN++V G+  NG   LALD    MHE  + + D + I++ L A     +L  G+ VH Y 
Sbjct: 177 WNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYV 236

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +R G +  V V T+L+DMY KCG + +A  +F  M SR VV+WN MI  Y   G PEEA 
Sbjct: 237 IRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
             F +M  +G +   VT +  L ACA       G  VH  + + +    V +  +L+ MY
Sbjct: 297 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           SK  KV  +  IF ++  KTLVSWN MI  Y      NEA+  F ++ ++ + PD FTM 
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMS 416

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           +V+PA   L ++R  + +H+ ++R  + +N  V  A++ MYA+CG V ++R +FD M  +
Sbjct: 417 AVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK 476

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
            V +WN +I GY  HG GK A+E+F++M     +PN+ TF+  ++ACS SG+ +EG   F
Sbjct: 477 DVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQF 536

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             +++DYGI P ++HYG M DLLGRAG L E   FI+ +PI P   ++G++L A +   +
Sbjct: 537 NLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRND 596

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           +++ E AA R+FEL+ D  G +V+L+++YA A  W+ + ++R+ M +KGL++T   S+VE
Sbjct: 597 IDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVE 656

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY---VPDTNSIHDVEDYVQENLLS 742
           L     SF +G   HPQSK I+   + L  +I    Y   + D  S+      +     +
Sbjct: 657 LHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPISLTSRRTIIP----N 712

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HS +LA+ FGL++S   + I ++KN+R+C  CH+A K IS  + R I+V D + +H F 
Sbjct: 713 KHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFL 772

Query: 803 NGVCSCGDYW 812
           +G C CGDYW
Sbjct: 773 DGSCCCGDYW 782



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 227/410 (55%), Gaps = 20/410 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +L+E R      I+ GL    ++    L++ + K   ++DA RVF+ +P +    +++M+
Sbjct: 122 ALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMV 181

Query: 111 KGYAK----------FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            GY            F  + +     +++++D V  +       L  C     + +G+E+
Sbjct: 182 DGYVSNGLGALALDCFREMHEG----LQVQHDGVGIIA-----ALAACCLDSALMQGREV 232

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  +I +G   D+   T +++MY KCG I  A  MF  MP R +V+WN ++ G+A NG  
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCP 292

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A D   +M  EG + + +T +++L A A   S   G++VHGY  R+ F   V + TAL
Sbjct: 293 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETAL 352

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           ++MY+K G+V+++  +F  M ++ +VSWN+MIAAY+      EA+ +F ++L+Q + P  
Sbjct: 353 LEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDY 412

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   + A   LG L +   +H  + +L  G +  +TN+++ MY++C  V  +  IF K
Sbjct: 413 FTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDK 472

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           + GK ++SWN +I+GYA +G+   AL  F +M+S  ++P+  T VSV+ A
Sbjct: 473 MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTA 522



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 160/318 (50%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           ++L + R +   +I+ GL       T L+ ++CK  +++ A  +F  +P +    ++ M+
Sbjct: 224 SALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMI 283

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GYA     ++A    ++M+ +     V     LL  C        G+ +HG +  + F 
Sbjct: 284 GGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFL 343

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +   T ++ MY+K G+++ +  +F +M  + LVSWN ++A +        A+ L   +
Sbjct: 344 PHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLEL 403

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +    D+ T+ +++PA   +G LR  + +H Y +R  +     V+ A++ MYA+CG V
Sbjct: 404 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDV 463

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            ++R +FD M  ++V+SWN++I  Y   G  + A+ +F +M   G++P   T +  L AC
Sbjct: 464 VSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTAC 523

Query: 351 ADLGDLERGIFVHKLLDQ 368
           +  G  + G     L+ +
Sbjct: 524 SVSGMADEGWIQFNLMQR 541


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/674 (38%), Positives = 389/674 (57%), Gaps = 41/674 (6%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LL +    G++R  + +  +++      D F+   +++ YAK G I+     FDRMP
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKML----KRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD VS+NT +AGF+ N   + +L+L  RM  EG      TIVSIL A A +  LR GK 
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  +   F   V +  AL DMYAKCG +E AR +FD +  +N+VSWN MI+ Y + G 
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           PE+ + +  +M   G  P  VT+                                   ++
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTM-----------------------------------ST 261

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +I+ Y +C +VD A  +FS+ + K +V W AM++GYA+NGR  +AL  F +M  ++I+PD
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S+T+ SV+ + A+L+ + + + +H   I +    N+ V +ALIDMY+KCG +  AR++F+
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           +M  R+V +WN MI G   +G  K A+ELF  ML+   KP+++TF+  +SAC H   +E+
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQ 441

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF S+   +G+ P +DHY  MV+LLGR GR+ +A   I+ M  +P   ++  +L  C
Sbjct: 442 GQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSIC 501

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
               ++   E AA  LFELDP     +++L+N+YA+   W  +A VR +M+ K ++K  G
Sbjct: 502 STKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAG 561

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E+ NEVH F S    HP+S+ IY  L  LI +++  G+ P+TN + HDV +  +  
Sbjct: 562 FSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFK 621

Query: 740 LLSSHSEKLAIAFGLLNSSPG-STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +  HSEKLA+AFGL+    G S I I KN+R+C DCH   K+ S + GR+II+RD +RF
Sbjct: 622 SICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRF 681

Query: 799 HCFKNGVCSCGDYW 812
           H F  G CSC D W
Sbjct: 682 HHFSTGKCSCNDNW 695



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 223/452 (49%), Gaps = 49/452 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S + K  S+ +    F+ +P +    Y+T + G++  +   +++    RM+ +   P 
Sbjct: 95  LLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y    +L     + ++R GK+IHG +IV  F  ++F    + +MYAKCG+IE+A  +FD
Sbjct: 155 EYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD 214

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            + +++LVSWN +++G+A+NG  E  + L+ +M   G   D +T+ +I+ A         
Sbjct: 215 CLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------- 265

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                     Y +CGRV+ AR VF   K +++V W +M+  Y +
Sbjct: 266 --------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAK 299

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E+A+ +F +ML + +EP + T+   + +CA L  L  G  VH       L  ++ +
Sbjct: 300 NGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +++LI MYSKC  +D A  +F+ +  + +VSWNAMI+G AQNG   +AL  F  M  +  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA-------KCG 490
           KPD+ T + +      LS   +  WI           N   MT  +D YA       + G
Sbjct: 420 KPDNVTFIGI------LSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
            +  A AL  +M ++     W+ ++    T G
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 135/266 (50%), Gaps = 5/266 (1%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           SG     +  + +++ +C+   + +A RVF    +K    +  M+ GYAK    +DA+  
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M  + + P  Y  + ++  C  +  +  G+ +HG+ I+ G + +L   + +++MY+K
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG I++A  +F+ MP R++VSWN ++ G AQNG  + AL+L   M ++  + D +T + I
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429

Query: 246 LPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM-KSR 303
           L A  +   +  G+      + + G    ++    +V++  + GR+E A  +   M    
Sbjct: 430 LSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDP 489

Query: 304 NVVSWNSMIAAYVEGG---NPEEAMR 326
           + + W+++++     G   N E A R
Sbjct: 490 DFLIWSTLLSICSTKGDIVNAEVAAR 515



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I +GL +  L  + L+ ++ K   + DA  VF  +P +    ++ M+ G A+     DA+
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDAL 408

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNM 182
                M      P    +  +L  C     I +G+E    +   +G +  L     +VN+
Sbjct: 409 ELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNL 468

Query: 183 YAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
             + G+IE+A  +   M  + D + W+T+++
Sbjct: 469 LGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/629 (41%), Positives = 392/629 (62%), Gaps = 11/629 (1%)

Query: 195 MFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +F+R  ++ D+ SWN+++A  A++G +  AL   + M +        +    + A +++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +  GK  H  A   G+ S + VS+AL+ MY+ CG++E AR VFD +  RN+VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 314 AYVEGGNPEEAMRIFQKML------DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            Y   GN  +A+ +F+ +L      D  +   ++ ++  + AC+ +        +H  + 
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 368 QLKLGTDVSMTNSLISMYSKCKK--VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +      VS+ N+L+  Y+K  +  V  A  IF ++  K  VS+N+++  YAQ+G  NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 426 LNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
              F ++ ++K +  ++ T+ +V+ A++    +R  K IH  VIR   E +V V T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY KCG V TAR  FD M  ++V +W  MI GYG HG    A+ELF  M++   +PN IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH+GL  EG  +F ++K  +G+EP ++HYG MVDLLGRAG L +A+D IQ+M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
            ++P   ++ ++L AC+IHKNVEL E +  RLFELD    GY++LL++IYA A  W  + 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR IM+ +GL K PG SL+EL  EVH F  G  +HPQ ++IY FL  L  ++  AGYV 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +T+S+ HDV++  +E  L  HSEKLAIAFG++N+ PGST+++ KNLRVC DCHN  K IS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  RE +VRD  RFH FK+G CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 227/443 (51%), Gaps = 20/443 (4%)

Query: 80  SLFCKYNSLSDAAR---------VFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRM 129
           +LFC  + L    R         +F    DK D   +++++   A+     +A+     M
Sbjct: 8   ALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM 67

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   + P   ++   +K C  + +I  GK+ H Q  V G+  D+F  + ++ MY+ CG++
Sbjct: 68  RKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKL 127

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM------HEEGRRGDFITIV 243
           E+A K+FD +P+R++VSW +++ G+  NG A  A+ L   +       ++    D + +V
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--VETARLVFDGMK 301
           S++ A + V +  + +++H + ++ GFD  V+V   L+D YAK G   V  AR +FD + 
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGI 360
            ++ VS+NS+++ Y + G   EA  +F++++   V   N +T+   L A +  G L  G 
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + ++ L  DV +  S+I MY KC +V+ A   F +++ K + SW AMI GY  +G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVM 479
              +AL  F  M    ++P+  T VSV+ A +   + +   +W +A+  R   E  +   
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427

Query: 480 TALIDMYAKCGAVGTARALFDMM 502
             ++D+  + G +  A  L   M
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRM 450



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 9/289 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS----FLIRMR 130
            + L+ ++     L DA +VF+ IP +    + +M++GY    +  DAVS     L+   
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173

Query: 131 YDDVAPVV--YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
            DD A  +       ++  C  V      + IH  +I  GF   +     +++ YAK G+
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233

Query: 189 --IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSI 245
             +  A K+FD++ ++D VS+N+I++ +AQ+G +  A ++  R+   +    + IT+ ++
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L AV++ G+LRIGK +H   +R G +  V V T+++DMY KCGRVETAR  FD MK++NV
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            SW +MIA Y   G+  +A+ +F  M+D GV P  +T +  L AC+  G
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 13/232 (5%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+ I DK    Y++++  YA+    ++A     R+  + V  V +N   L  V   
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV--VTFNAITLSTVLLA 296

Query: 151 V---GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           V   G +R GK IH Q+I  G   D+   T +++MY KCG++E A K FDRM  +++ SW
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG----SLRIGKAVHG 263
             ++AG+  +G A  AL+L   M + G R ++IT VS+L A ++ G      R   A+ G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
              R G +  +     +VD+  + G ++ A  +   MK + + + W+S++AA
Sbjct: 417 ---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 10/197 (5%)

Query: 43  SALLLEVCTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           S +LL V  S  L+  + I   +I+ GL D  +  T ++ ++CK   +  A + F+ + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--- 157
           K    +  M+ GY        A+     M    V P    +  +L  C   G    G   
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410

Query: 158 -KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFA 215
              + G+    G    L     +V++  + G +++AY +  RM  + D + W++++A   
Sbjct: 411 FNAMKGRF---GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467

Query: 216 QNGFAELALDLVTRMHE 232
            +   ELA   V R+ E
Sbjct: 468 IHKNVELAEISVARLFE 484


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 292/768 (38%), Positives = 433/768 (56%), Gaps = 14/768 (1%)

Query: 56   LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAK 115
            L ++L  ++KSG        + LVS F ++    +A  +F  +  K     + ++ G  +
Sbjct: 294  LDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR 353

Query: 116  FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD--VGE--IRRGKEIHGQLIVNGFS- 170
                ++AV   +  R + V      Y  LL    +  + E  +R G+ +HG ++  G + 
Sbjct: 354  QDFSEEAVKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTD 412

Query: 171  LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            L +    G+VNMYAKCG IE A K+F  M   D +SWNTI++   QNG  E A+   + M
Sbjct: 413  LKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLM 472

Query: 231  HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +         ++S L + A +  L  G+ VH  A++ G D   +VS  LV MY +CG +
Sbjct: 473  RQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAM 532

Query: 291  ETARLVFDGMKSRNVVSWNSMIAAYVEGGNP-EEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                 VF+ M   + VSWN+M+        P  E +++F  M+  G+ P  VT +  L A
Sbjct: 533  SDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAA 592

Query: 350  CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVS 408
             + L  LE G  VH  + +  +  D  + N+LIS Y+K   +     +F+ +  +   +S
Sbjct: 593  LSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAIS 652

Query: 409  WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
            WN+MI GY  NG + EA++    M       D  T   ++ A A ++ +     +HA  I
Sbjct: 653  WNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGI 712

Query: 469  RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            RS  E +V V +AL+DMY+KCG V  A  LF+ M +R+  +WN MI GY  HGLG+ A+E
Sbjct: 713  RSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIE 772

Query: 529  LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
            +F +ML     P+ +TF+  +SACSH+GLVE G+ YF  +  D+GI P ++HY  ++DLL
Sbjct: 773  IFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF-EMMPDHGILPQIEHYSCVIDLL 831

Query: 589  GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK---NVELGEKAANRLFELDPDEGG 645
            GRAG++++  ++IQ+MPIEP   ++  +L AC+  K   N++LG +A+  L E++P    
Sbjct: 832  GRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPV 891

Query: 646  YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
             +VL +N +AA  MW+  AK RT M +   +K  G S V L + VH+F +G   HP +K 
Sbjct: 892  NYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKE 951

Query: 706  IYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
            IY  L  LI  I+ AGYVP T  +++D+E+  +E LLS HSEKLAIAF L  SS G  I 
Sbjct: 952  IYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSGP-IR 1010

Query: 765  IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLRVCGDCH A +YIS +  R+II+RD  RFH FK+G CSCGDYW
Sbjct: 1011 IMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 256/532 (48%), Gaps = 31/532 (5%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +IK GL         LV+ + K   L+ A++VF+ +P++    +  ++ GY      ++A
Sbjct: 87  LIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEA 146

Query: 123 VSF---LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAMT 177
                 ++R       P  + +  LL+ C D G  R G   ++HG +    ++ +     
Sbjct: 147 FRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCN 206

Query: 178 GVVNMYAKC--GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
            +++MY  C  G    A ++FD  P RDL++WN +++ +A+ G       L   M    +
Sbjct: 207 ALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM----Q 262

Query: 236 RGDFITIVSILPAVANVGSL-----------RIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           RGD  + + + P     GSL            +   V  + +++G  S + V +ALV  +
Sbjct: 263 RGD--SRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAF 320

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A+ G  + A+ +F  +K +N V+ N +I   V     EEA++IF    +  V+    T +
Sbjct: 321 ARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYV 379

Query: 345 EALHACADLGDLERGIFVHKLL--DQLKLG-TD--VSMTNSLISMYSKCKKVDRAADIFS 399
             L A A+    E G+ + +++    L+ G TD  ++++N L++MY+KC  ++ A+ IF 
Sbjct: 380 VLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQ 439

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            ++    +SWN +I    QNG   EA+ ++  MR   I P +F ++S + + A L ++  
Sbjct: 440 LMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTA 499

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + +H   ++   + +  V   L+ MY +CGA+     +F+ M E    +WN M+    +
Sbjct: 500 GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMAS 559

Query: 520 HGLG-KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
                   V++FN M+ G   PN +TF+  ++A S   ++E G     ++ K
Sbjct: 560 SQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK 611



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 233/471 (49%), Gaps = 21/471 (4%)

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           G+    + +H +LI  G + DLF    +VN YAK  ++  A ++FD MPER+ VSW  +V
Sbjct: 75  GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134

Query: 212 AGFAQNGFAELALDLVTRMHEE---GRRGDFITIVSILPAVANVGSLRIGKA--VHGYAM 266
           +G+  +G AE A  +   M  E   G R    T  ++L A  + G  R+G A  VHG   
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 267 RAGFDSIVNVSTALVDMYAKC--GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           +  + S   V  AL+ MY  C  G    A+ VFDG   R++++WN++++ Y + G+    
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254

Query: 325 MRIFQKML--DQGVE--PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMT 378
             +F+ M   D  ++  PT  T   +L   A L      +    L+  LK G  +D+ + 
Sbjct: 255 FTLFKDMQRGDSRIQLRPTEHTF-GSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVG 313

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++L+S +++    D A DIF  L+ K  V+ N +I+G  +     EA+  F   R+  + 
Sbjct: 314 SALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRN-TVD 372

Query: 439 PDSFTMVSVIPALAELSV----IRYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVG 493
            ++ T V ++ ALAE S+    +R  + +H  ++R+   +  + V   L++MYAKCGA+ 
Sbjct: 373 VNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +A  +F +M      +WN +I     +G  + AV  ++ M +    P++   + ++S+C+
Sbjct: 433 SASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCA 492

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
              L+  G        K +G++        +V + G  G +++ W     M
Sbjct: 493 GLKLLTAGQQVHCDAVK-WGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM 542



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 158/330 (47%), Gaps = 13/330 (3%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +LP +   G     + +H   ++ G +  + +   LV+ YAK  R+  A  VFD M  RN
Sbjct: 67  LLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERN 126

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ---GVEPTNVTIMEALHACADLGDLERG-- 359
            VSW  +++ YV  G  EEA R+F+ ML +   G  PT+ T    L AC D G    G  
Sbjct: 127 AVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFA 186

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCK--KVDRAADIFSKLQGKTLVSWNAMILGYA 417
           + VH L+ + +  ++ ++ N+LISMY  C       A  +F     + L++WNA++  YA
Sbjct: 187 VQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYA 246

Query: 418 QNGRVNEALNYFCKMRSKN----IKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCF 472
           + G V      F  M+  +    ++P   T  S+I A +  S        +   V++S  
Sbjct: 247 KKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGC 306

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             +++V +AL+  +A+ G    A+ +F  + +++  T N +I G       + AV++F  
Sbjct: 307 SSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVG 366

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGI 562
                   N  T++  +SA +   + EEG+
Sbjct: 367 T-RNTVDVNADTYVVLLSALAEYSISEEGL 395


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/631 (41%), Positives = 375/631 (59%), Gaps = 35/631 (5%)

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YA CG+     K+FD M +R++V +N ++  +  N   +  L +   M   G R D  T 
Sbjct: 63  YAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTY 122

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             +L A +   +LR G  +HG  ++ G D  + V   L+ MY KCG +  AR VFD M  
Sbjct: 123 PCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIW 182

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++VVSWNSM+A Y      ++A+ I ++M D G +P   T+   + A A+    E  ++V
Sbjct: 183 KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-ENVLYV 241

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
            K                                IF  L+ K L+SWN MI  Y +N   
Sbjct: 242 EK--------------------------------IFVNLERKNLISWNVMIRVYMKNSLP 269

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            +A++ + +M    ++PD+ T  SV+PA  +LS +   + IH  V +     N+ +  +L
Sbjct: 270 TQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSL 329

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMYA+CG +  A+ +FD M  R V +W  +I  YG  G G  AV LF +ML     P+ 
Sbjct: 330 IDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDS 389

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           I F+  +SACSHSGL++EG  YF  +  DY I P ++HY  +VDLLGRAGR++EA++ I+
Sbjct: 390 IAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIK 449

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           +MPIEP   V+  +L +C++  N+++G  AA+ L +L P++ GY+VLL+NIYA A  W +
Sbjct: 450 QMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKE 509

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           + ++R++M++K ++KTPG S VEL N+VH+F +G T HPQSK IY  L  L+ ++K  GY
Sbjct: 510 VTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGY 569

Query: 723 VPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           VP+T+S +HDVE+  +E  L+ HSEKLAI F LLN+     I I KNLRVCGDCH A K 
Sbjct: 570 VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKL 628

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS +  REIIVRD +RFH FK+GVCSCGDYW
Sbjct: 629 ISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 238/530 (44%), Gaps = 85/530 (16%)

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           +VF+ + D+    Y+ M++ Y      DD +     M      P  Y Y  +LK C    
Sbjct: 74  KVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSE 133

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +R G  IHG ++  G   +LF   G++ MY KCG + EA ++FD M  +D+VSWN++VA
Sbjct: 134 NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVA 193

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+A N   + AL++   M + G++ D  T+ S++PAVAN  S                ++
Sbjct: 194 GYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS----------------EN 237

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           ++ V                   +F  ++ +N++SWN MI  Y++   P +A+ ++ +M 
Sbjct: 238 VLYVEK-----------------IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQME 280

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
              VEP  +T    L AC DL  L  G  +H+ +++ KL  ++ + NSLI MY++C  +D
Sbjct: 281 KCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLD 340

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F +++ + + SW ++I  Y   G+   A+  F +M +    PDS   V+++ A +
Sbjct: 341 DAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACS 400

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT--- 509
                                                G +   R  F  M + +  T   
Sbjct: 401 H-----------------------------------SGLLDEGRIYFKQMTDDYRITPRI 425

Query: 510 --WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
             +  ++D  G  G    A  +  +M   P +PN+  +   +S+C     ++ GI    +
Sbjct: 426 EHYACLVDLLGRAGRVDEAYNIIKQM---PIEPNERVWATLLSSCRVFTNMDIGILAADN 482

Query: 568 LKKDYGIEPVMDHYGAMV-DLLGRAGRLNEAWDF-----IQKMPIEPGIT 611
           L +   + P    Y  ++ ++  +AGR  E  +       +K+   PGI+
Sbjct: 483 LLQ---LAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGIS 529



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 161/329 (48%), Gaps = 42/329 (12%)

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+  YA CG     R VFD M  RNVV +N MI +YV     ++ + +F++M++ G  P 
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM--TNSLISMYSKCKKVDRAADI 397
           N T    L AC+   +L  G+ +H   D LK+G D ++   N LI+MY KC  +  A  +
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHG--DVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRV 176

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++  K +VSWN+M+ GYA N R ++AL    +M     KPD  TM S++PA+A  S  
Sbjct: 177 FDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS-- 234

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
                           +NV  +                  +F  +  +++ +WNVMI  Y
Sbjct: 235 ---------------SENVLYV----------------EKIFVNLERKNLISWNVMIRVY 263

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--HSGLVEEGIHYFTSLKKDYGIE 575
             + L   AV+L+ +M +   +P+ ITF   + AC    + L+   IH +   KK   + 
Sbjct: 264 MKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKK---LC 320

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           P +    +++D+  R G L++A     +M
Sbjct: 321 PNLLLENSLIDMYARCGCLDDAKRVFDRM 349



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 185/368 (50%), Gaps = 41/368 (11%)

Query: 39  YRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARV 94
           Y +P   +L+ C+  + LR  L +   ++K GL D +LF    L++++ K   L +A RV
Sbjct: 120 YTYPC--VLKACSCSENLRYGLLIHGDVLKVGL-DFNLFVGNGLIAMYGKCGCLFEARRV 176

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+ +  K    +++M+ GYA              MR+DD           L++C      
Sbjct: 177 FDEMIWKDVVSWNSMVAGYAH------------NMRFDDA----------LEIC------ 208

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
            R  E +GQ   +G ++    M  V N  ++   +    K+F  +  ++L+SWN ++  +
Sbjct: 209 -REMEDYGQK-PDGCTMASL-MPAVANTSSE--NVLYVEKIFVNLERKNLISWNVMIRVY 263

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
            +N     A+DL  +M +     D IT  S+LPA  ++ +L +G+ +H Y  +      +
Sbjct: 264 MKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL 323

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            +  +L+DMYA+CG ++ A+ VFD MK R+V SW S+I+AY   G    A+ +F +ML+ 
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNS 383

Query: 335 GVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           G  P ++  +  L AC+  G L+ G I+  ++ D  ++   +     L+ +  +  +VD 
Sbjct: 384 GQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDE 443

Query: 394 AADIFSKL 401
           A +I  ++
Sbjct: 444 AYNIIKQM 451



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 27/313 (8%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           + +AL    D+  L++   +H ++  L    + S+   L+  Y+ C +      +F ++ 
Sbjct: 24  LAKALDQNPDIKTLKK---LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS 80

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +V +N MI  Y  N R ++ L  F +M +   +PD++T   V+ A +    +RY   
Sbjct: 81  DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLL 140

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  V++   + N+FV   LI MY KCG +  AR +FD M  + V +WN M+ GY  +  
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMR 200

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY----FTSLKKDYGIEPVM 578
              A+E+  +M +   KP+  T    + A +++    E + Y    F +L++   I    
Sbjct: 201 FDDALEICREMEDYGQKPDGCTMASLMPAVANTS--SENVLYVEKIFVNLERKNLIS--- 255

Query: 579 DHYGAMVDLLGRAGRLNEAWDF---IQKMPIEPGITVFGAMLGAC----------KIHKN 625
             +  M+ +  +     +A D    ++K  +EP    F ++L AC          +IH+ 
Sbjct: 256 --WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEY 313

Query: 626 VELGEKAANRLFE 638
           VE  +   N L E
Sbjct: 314 VEKKKLCPNLLLE 326


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/649 (37%), Positives = 386/649 (59%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+ +   + DA R+F+ +P+K   L++ ML G+ K    + AV     MR     
Sbjct: 11  SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  +L +C        G ++HG +I  GF  D      +V MY+K GQ+ +A K+
Sbjct: 71  PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ MP+ ++V+WN ++AGF QNGF + A  L + M   G   D IT  S LP+V    SL
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           + GK +HGY +R G    V + +AL+D+Y KC  V  A  +F    + ++V   ++I+ Y
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGY 250

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V  G   +A+ IF+ +L++ + P  VT+   L ACA L  L  G  +H  + +  L    
Sbjct: 251 VLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + ++++ MY+KC ++D A  IF ++  K  V WNA+I   +QNG+  EA++ F +M  +
Sbjct: 311 HVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE 370

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            +  D  ++ + + A A L  + + K IH+ +I+  F+  VF  +ALIDMY KCG +  A
Sbjct: 371 GLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVA 430

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FDMM E++  +WN +I  YG+HG  + ++ LF+KMLE   +P+ +TFL  +SAC H+
Sbjct: 431 RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHA 490

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G V++GI YF  + ++YGI   M+HY  +VDL GRAGRLNEA++ I+ MP  P   V+G 
Sbjct: 491 GQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGT 550

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC++H NVEL E A+  L +LDP+  G +VLL+N++A A  W  + K+R++M+K+G+
Sbjct: 551 LLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGV 610

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           QK PG S +E+    H F +    HP+S +IY+ L  L+ E++  GY P
Sbjct: 611 QKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 266/512 (51%), Gaps = 8/512 (1%)

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GF++D F  + ++ +YA+ G IE+A ++FD+MP +D V WN ++ GF + G    A+ + 
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             M     + + IT  S+L   A+      G  +HG  +  GF     V+ ALV MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G++  A  +F+ M   NVV+WN MIA +V+ G  +EA  +F +M+  GV P ++T    L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            +  +   L++G  +H  + +  +  DV + ++LI +Y KC+ V  A  IF +     +V
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
              A+I GY  NG  N+AL  F  +  + + P++ T+ SV+PA A L+ +   K +HA +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           ++   ++   V +A++DMYAKCG +  A  +F  M E+    WN +I     +G  + A+
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMV 585
           +LF +M       + ++   A+SAC++   +  G  IH F  +K  +  E   +   A++
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM-IKGAFDSEVFAE--SALI 418

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDE 643
           D+ G+ G L+ A   +  M  E     + +++ A   H ++E+     +++ E  + PD 
Sbjct: 419 DMYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDH 477

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
             +  +L+    A  +   +   R + E+ G+
Sbjct: 478 VTFLTILSACGHAGQVDKGIQYFRCMTEEYGI 509



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 247/483 (51%), Gaps = 5/483 (1%)

Query: 44  ALLLEVCTS--LKEL-RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L +C S  L E   ++  L+I  G     L    LV+++ K+  LSDA ++F  +PD
Sbjct: 77  ASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPD 136

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                ++ M+ G+ +   +D+A      M    V+P    +   L    +   +++GKEI
Sbjct: 137 TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEI 196

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG ++ +G +LD+F  + ++++Y KC  +  A K+F +    D+V    I++G+  NG  
Sbjct: 197 HGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLN 256

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL++   + EE    + +T+ S+LPA A + +L +GK +H   ++ G D   +V +A+
Sbjct: 257 NDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAI 316

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKCGR++ A  +F  M  ++ V WN++I    + G P+EA+ +F++M  +G+    
Sbjct: 317 MDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDC 376

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           V+I  AL ACA+L  L  G  +H  + +    ++V   ++LI MY KC  +  A  +F  
Sbjct: 377 VSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDM 436

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL-SVIRY 459
           ++ K  VSWN++I  Y  +G +  +L  F KM    I+PD  T ++++ A      V + 
Sbjct: 437 MREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKG 496

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYG 518
            ++   +         +     ++D++ + G +  A   + +M        W  ++    
Sbjct: 497 IQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACR 556

Query: 519 THG 521
            HG
Sbjct: 557 VHG 559


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/707 (37%), Positives = 412/707 (58%), Gaps = 42/707 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE---EAYKMFDRMP 200
           LL  C  +  +R    IH Q+I  G     +A++ ++ +       +    A  +F+ + 
Sbjct: 39  LLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQ 95

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E +L+ WNT+  G A +     AL L   M   G   +  T   +L + A   + + G+ 
Sbjct: 96  EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD---------------GMKSR-- 303
           +HG+ ++ G+D  + V T+L+ +Y + GR+E AR VFD               G  SR  
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215

Query: 304 --------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                         +VVSWN+MI+ Y E GN +EA+ +F++M+   + P   T++  + A
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA  G +E G  VH  +D    G+++ + NSL+ +YSKC +++ A  +F  L  K ++SW
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV-- 467
           N +I GY       EAL  F +M     +P+  TM+S++PA A L  I   +WIH  +  
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 468 -IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
            ++S    +  + T+LIDMYAKCG +  A  +F+ +  + +++WN MI G+  HG   AA
Sbjct: 396 RLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAA 454

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            ++F++M +   +P+DITF+  +SACS SG+++ G H F ++ +DY I P ++HYG M+D
Sbjct: 455 FDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMID 514

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           LLG +G   EA + I  M +EP   ++ ++L ACKI  NVELGE  A  L +++P+  G 
Sbjct: 515 LLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGC 574

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +VLL+NIYA A  W+++AK+R ++  KG++K PGCS +E+ + VH F  G   HP+++ I
Sbjct: 575 YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           Y  LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVC +CH ATK IS +  REII RD  RFH F++GVCSC DYW
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 303/598 (50%), Gaps = 83/598 (13%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC---KYNSLSDAARVFEP 97
           HPS  LL  C +L+ LR I   +IK+GL + +   +KL+ L      ++ L  A  VFE 
Sbjct: 34  HPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           I +    +++TM +G+A  +    A+   + M    + P  Y + +LLK C      + G
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER--------------- 202
           ++IHG ++  G+ LDLF  T ++++Y + G++E+A K+FDR P R               
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213

Query: 203 ----------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
                           D+VSWN +++G+A+ G  + AL+L   M +   R D  T+V+++
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A  GS+ +G+ VH +    GF S + +  +L+D+Y+KCG +ETA  +F+G+  ++V+
Sbjct: 274 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVI 333

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L ACA LG ++ G ++H  +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 367 DQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           D+ LK  T+  S+  SLI MY+KC  ++ A  +F+ +  K+L SWNAMI G+A +GR + 
Sbjct: 394 DKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A + F +MR   I+PD  T V ++ A                                  
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSAC--------------------------------- 480

Query: 485 MYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             ++ G +   R +F  M + +  T     +  MID  G  GL K A E+ N M     +
Sbjct: 481 --SRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM---EME 535

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH-YGAMVDLLGRAGRLNE 596
           P+ + +   + AC   G VE G  +  +L K   IEP     Y  + ++   AGR NE
Sbjct: 536 PDGVIWCSLLKACKIRGNVELGESFAQNLIK---IEPENPGCYVLLSNIYATAGRWNE 590



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 207/456 (45%), Gaps = 75/456 (16%)

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC------GRVETARLVFDG 299
           L  + N  +L+  + +H   ++ G     N + AL  +   C        +  A  VF+ 
Sbjct: 37  LSLLHNCKTLQSLRLIHAQMIKTGLH---NTNYALSKLLELCVISPHFDGLPYAISVFET 93

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++  N++ WN+M   +    +P  A++++  M+  G+ P + T    L +CA     + G
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK----------------------------- 390
             +H  + +L    D+ +  SLIS+Y +  +                             
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213

Query: 391 --VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             ++ A  +F ++  K +VSWNAMI GYA+ G   EAL  F +M   NI+PD  TMV+V+
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A+   I   + +H+ +    F  N+ ++ +L+D+Y+KCG + TA  LF+ +  + V 
Sbjct: 274 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVI 333

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYF- 565
           +WN +I GY    L K A+ LF +ML    +PND+T L  + AC+H G ++ G  IH + 
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 566 --------------TSLKKDYG---------------IEPVMDHYGAMVDLLGRAGRLNE 596
                         TSL   Y                +   +  + AM+      GR + 
Sbjct: 394 DKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 597 AWDF---IQKMPIEPGITVFGAMLGACKIHKNVELG 629
           A+D    ++K+ IEP    F  +L AC     ++LG
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG 489


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/831 (32%), Positives = 438/831 (52%), Gaps = 81/831 (9%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL+ C++++E   I   +I + L       +++++     N+L  A ++     +    +
Sbjct: 41  LLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESII 100

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++T+L+   K     + +     M    V   +  + +L+  C    +++ G E+HG+++
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             GF  +      ++ +Y+KCG+++E  ++F++M  RD++SWNT+++ +   G    ALD
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M   G   D IT+VS++   A +  L +GK +H Y +        ++   LVDMY+
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280

Query: 286 KCGR---------------------------------VETARLVFDGMKSRNVVSWNSMI 312
           KCG+                                 ++ AR +FD M  R++VSW +M+
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMM 340

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + YV+GG   E++ +FQ+M  + V P  V ++  L AC  L D + G  VH  +    + 
Sbjct: 341 SGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGML 400

Query: 373 TDVSMTNSLISMYSKCKK-------------------------------VDRAADIFSKL 401
            D  + N+L+ +Y+KC K                               VD+A D F+K+
Sbjct: 401 VDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKI 460

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K +VSWN M+  Y ++   NE+   FCKM+S N+KPD  T++S++ + A++  + +  
Sbjct: 461 PEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGI 520

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           W++  + ++    +  + TALIDMY KCG V  A  +F  + E++V  W  M+  Y   G
Sbjct: 521 WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEG 580

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
               A++L+ +M E   KP+ +TF+  ++ACSH GLV+EG  YF  L+  Y I P + HY
Sbjct: 581 QALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHY 640

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G MVDLLGR G L E   FI++MPIEP ++++ +++ AC+ H NVEL E+A  +L E+DP
Sbjct: 641 GCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDP 700

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              G HVLL+NIYA A  WD ++KVRT + + G+ K PG +++E    VH F + +    
Sbjct: 701 TNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNL--- 757

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            S  I   L+ +   +     + DT               S HSE+LA+AFGL+N+   S
Sbjct: 758 VSADILCMLQDIERRLLVKQELSDTT--------------SQHSERLAVAFGLINNQENS 803

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I +  ++R+C DCH+  K IS    REI++RD +RFH F +G CSC DYW
Sbjct: 804 PIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 190/417 (45%), Gaps = 45/417 (10%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I+ +L + +N+   R    +H + + A       +++ ++        ++ A  +     
Sbjct: 38  IIDLLKSCSNI---REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
               + WN+++   ++ G P+E +  +  M+ QGV     T    +HAC    D++ G  
Sbjct: 95  EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  + +   G + S+ N+L+ +YSKC K+     +F K+  + ++SWN MI  Y   G 
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             EAL+ F +M    + PD  TMVS++   A+L  +   K +H  ++ +       ++  
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274

Query: 482 LIDMYAKCG---------------------------------AVGTARALFDMMNERHVT 508
           L+DMY+KCG                                  +  AR LFD MNER + 
Sbjct: 275 LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLV 334

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT 566
           +W  M+ GY   G    ++ELF +M      P+++  +  +SAC H    + G  +H F 
Sbjct: 335 SWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFI 394

Query: 567 SLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
                YG+  ++D +   A++DL  + G+L+EA    +++P +   +    + G C+
Sbjct: 395 V---TYGM--LVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCR 446


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 272/778 (34%), Positives = 439/778 (56%), Gaps = 16/778 (2%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++  TSL++ R+I   +I+SG  D       L+ ++ +  S  DA  + + +P +  
Sbjct: 19  ARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNA 78

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ +++  A+      ++ F  RM  D   P    +  L+K    + E   G+ +   
Sbjct: 79  LSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIVQEF 135

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
              +GF       T ++ MY +CG+++ A   FDR+ ER +VSWN ++  +++    E +
Sbjct: 136 AEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDSIVNVSTALV 281
           L +   M  +G   + +TI+ I  AVA + +     G  +H  ++ +G  S+  V+ +++
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSII 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +++ + G +  A  +F+ M  R+V SWN+MI+A+ + G+   A+ ++ +M    + P  V
Sbjct: 256 NLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGV 312

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T +  L AC    DLERG  +H+ +      +D+ +  +L+SMY +C ++DRAA++F+ +
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA- 460
           Q   +++ NA+I  +AQ GR + +L +F +M    I+P  FT+V+V+ A A       A 
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 461 ----KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
               +W+ A     C   ++ V  AL++MYAKCG +  AR +FD   + +V+TWN ++ G
Sbjct: 433 RDLHRWM-AECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAG 491

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  HG    AV L  +M      P+ I+F  A+SA SH+  VE+G   F ++ +DYG+ P
Sbjct: 492 YAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIP 551

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYGA+VDLLGRAG L EA  F++ M I      + A+LGAC+IHK+ +   +AA  +
Sbjct: 552 SVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAI 611

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
             +DP  G  + +L+N+Y+AA  WD+  ++R  M + G +K PG S +E+KN VH F   
Sbjct: 612 VAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVK 671

Query: 697 STKHPQSKRIYTFLETLIDEIKA-AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
              HP++  IY  L+ L   +K+   YVPD  S+ HDVED  +ENLL  HSEKLA+ FGL
Sbjct: 672 DRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGL 731

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + +  GS I I KNLR+C DCH   K  S  T REI+VRD +RFH F  G CSC D W
Sbjct: 732 IGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 221/417 (52%), Gaps = 8/417 (1%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           A  V ++  L ++  +   + +G++IH ++I +G+   LF    +++MYA+     +A  
Sbjct: 9   AAPVDSWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAEL 68

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           + DRMP R+ +SWN ++   AQ G    +L    RM ++G   D +  +S++ A   +  
Sbjct: 69  LLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE 128

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
              G+ V  +A ++GFD    V TAL+ MY +CGR++ A+  FD ++ R VVSWN++I  
Sbjct: 129 ---GEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITV 185

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD--LERGIFVHKLLDQLKLG 372
           Y  G   E+++R+F++ML QG+ P  VTI+    A A +       G  +H       L 
Sbjct: 186 YSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLI 245

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +  ++ NS+I+++ +   + RA DIF K+  + + SWN MI  +AQNG  + AL+ + +M
Sbjct: 246 SVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM 305

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
               I+PD  T V+V+ A      +   + IH  V    ++ ++ V TAL+ MY +CG +
Sbjct: 306 ---TIRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRL 362

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             A  +F  +    V T N +I  +   G    ++  F +ML+   +P+  T +  +
Sbjct: 363 DRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/663 (38%), Positives = 399/663 (60%), Gaps = 38/663 (5%)

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGV--VNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +I   K++HG+ ++N   L      G+  + +YA CG+   A  +FD + ++++V +N +
Sbjct: 33  DINTLKKLHGK-VLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVM 91

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +  +  N   + AL +   M+ +G   D  T   +L A +   SL +G  +HG  ++ G 
Sbjct: 92  IRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGL 151

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           D  + V   L+ MY KC  ++ A+ V D +  R+VVSWNSM++ Y + G   +A+ + ++
Sbjct: 152 DLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCRE 211

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M    ++P + T+   L A                         V+ T S   +Y K   
Sbjct: 212 MEALNLKPNDCTMASLLPA-------------------------VTNTTSDNVLYVK--- 243

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
                ++F KL  K+++SWN MI  Y  N    EA+  + +M +  ++PD  ++VSV+PA
Sbjct: 244 -----EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
             +LS +   + +H    R     N+ +  ALIDMYAKCG +  ARA+F+ M  R V +W
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW 358

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
             +I  YG  G G+ AV +F +M      P+ I F+  ++ACSH+GL+++G +YF +L  
Sbjct: 359 TSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYF-NLMA 417

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           + GI P ++H+  +VDLLGRAG+++EA+ FI++MP+EP   V+G +L AC+++ N+ +G 
Sbjct: 418 ECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGI 477

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA++L  L+P+  GY+VLL+NIYA A  W  +A +R+IME+KG++K PG S VEL + V
Sbjct: 478 LAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGV 537

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLA 749
           H+F +G   HPQSK+IY  L+ L+ ++K  GY+P+T+S +HDVE+  +E  L+ HSEKLA
Sbjct: 538 HTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLA 597

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +AF ++N+ PG+ I + KNLRVCGDCH A K IS +  REII+RD HRFH F+ G CSCG
Sbjct: 598 VAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCG 657

Query: 810 DYW 812
           DYW
Sbjct: 658 DYW 660



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 214/440 (48%), Gaps = 38/440 (8%)

Query: 68  LCDQHL-----FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           L DQ+L        KL+ ++        A  +F+ I DK    ++ M++ Y       DA
Sbjct: 45  LNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDA 104

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     M      P +Y Y  +LK       +  G +IHG ++  G  L+L+   G++ M
Sbjct: 105 LLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAM 164

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y KC  ++EA ++ D +P RD+VSWN++V+ +AQNG    AL+L   M     + +  T+
Sbjct: 165 YGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTM 224

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+LPAV N  S                D+++ V     +M+ K             +  
Sbjct: 225 ASLLPAVTNTTS----------------DNVLYVK----EMFLK-------------LTK 251

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++V+SWN MIA YV    P+EA+ ++ +M   GVEP  V+I+  L A  DL  L  G  V
Sbjct: 252 KSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRV 311

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           HK  ++ KL  ++ + N+LI MY+KC  +  A  +F+++Q + +VSW ++I  Y + G+ 
Sbjct: 312 HKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQG 371

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            +A+  F +MR+  + PDS   VSV+ A +   ++   ++   L+        +     +
Sbjct: 372 RDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACV 431

Query: 483 IDMYAKCGAVGTARALFDMM 502
           +D+  + G +  A      M
Sbjct: 432 VDLLGRAGKIDEAYGFIRQM 451



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 30/235 (12%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           RR+     +  L    L +  L+ ++ K   L DA  VF  +  +    + +++  Y K 
Sbjct: 309 RRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKC 368

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DAV+    MR   + P    +  +L  C   G +  G+     +   G +  L   
Sbjct: 369 GQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHF 428

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG---FAQNGFAELALDLVTRMHE 232
             VV++  + G+I+EAY    +MP E D   W  +++    ++      LA D +  ++ 
Sbjct: 429 ACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNP 488

Query: 233 E---------------GRRGDFITIVSI--------LPAVANVGSLRIGKAVHGY 264
           E               GR  D   I SI        LP ++NV    +   VH +
Sbjct: 489 EHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNV---ELNDGVHTF 540


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 395/661 (59%), Gaps = 5/661 (0%)

Query: 157  GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            G++IH  +I + F+  +     ++NMY+K G +  A K F   PE DL+SWNT+++ +AQ
Sbjct: 913  GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 217  NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS---LRIGKAVHGYAMRAGFDSI 273
            N     A+     +  +G + D  T+ S+L A +         +G  VH YA++ G  + 
Sbjct: 973  NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032

Query: 274  VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
              VSTAL+D+Y+K G+++ A  +  G    ++ SWN+++  Y++     +A+  F  M +
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 334  QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             G+    +T+  A+ A   L +L++G  +     +L    D+ +++ ++ MY KC  +  
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 394  AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
            A ++F ++     V+W  MI GY +NG  + AL+ +  MR   ++PD +T  ++I A + 
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 454  LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            L+ +   K IHA V++  +  + FV T+L+DMY KCG+V  A  +F  M+ R V  WN M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 514  IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
            + G   HG    A+ LF  M     +P+ +TF+  +SACSHSGL  E   YF ++ K YG
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 574  IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
            I P ++HY  +VD LGRAGR+ EA + I  MP +   +++ A+LGAC+   + E  ++ A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392

Query: 634  NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++L  LDP +   +VLL+NIYAA+  WD +   R +M+ K ++K PG S +++KN+VH F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452

Query: 694  YSGSTKHPQSKRIYTFLETLIDEIKAAG-YVPDTN-SIHDVEDYVQENLLSSHSEKLAIA 751
                  HPQ+  IY  +E L+  I+  G YVPDT+ ++ DVE+  +E  L  HSEKLAIA
Sbjct: 1453 VVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIA 1512

Query: 752  FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            FGL+++ P +TI + KNLRVCGDCH+A K IS +T REI++RD +RFH F+NG CSCGDY
Sbjct: 1513 FGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDY 1572

Query: 812  W 812
            W
Sbjct: 1573 W 1573



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 253/503 (50%), Gaps = 8/503 (1%)

Query: 58   RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
            +I  L+IKS           L++++ K   +  A + F   P+ LD + ++TM+  YA+ 
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE-LDLISWNTMISSYAQN 973

Query: 117  ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGE-IRRGKEIHGQLIVNGFSLDL 173
                +A+     +  D + P  +    +L+ C  GD GE    G ++H   I  G   D 
Sbjct: 974  NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDS 1033

Query: 174  FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
            F  T ++++Y+K G+++EA  +     + DL SWN I+ G+ ++  +  AL+  + MHE 
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM 1093

Query: 234  GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            G   D IT+ + + A   + +L+ GK +  YA++ GF++ + VS+ ++DMY KCG +  A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153

Query: 294  RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
              +F  +   + V+W +MI+ Y+E G+ + A+ ++  M   GV+P   T    + A + L
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213

Query: 354  GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              LE+G  +H  + +L    D  +  SL+ MY KC  V  A  +F K+  + +V WNAM+
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCF 472
            LG AQ+G V+EALN F  M+S  I+PD  T + V+ A +   +   A K+  A+      
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFN 531
               +   + L+D   + G +  A  +   M  +   + +  ++    T G  + A  + +
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVAD 1393

Query: 532  KMLE-GPTKPNDITFLCAISACS 553
            K+L   P+  +    L  I A S
Sbjct: 1394 KLLALDPSDSSAYVLLSNIYAAS 1416



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 263/557 (47%), Gaps = 38/557 (6%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            LV+++CKY  +  A  +F+ +P++   L++ MLK Y + +  D+A+ F          P 
Sbjct: 758  LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFP- 816

Query: 138  VYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
              +++ L  V G V  ++   ++ H +  V  +++ +F      N++A            
Sbjct: 817  --DFSNLHCVIGGVNSDVSNNRKRHAEQ-VKAYAMKMFPFDQGSNIFA------------ 861

Query: 197  DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
                      WN  +  F   G    A+D    +       D +T+V IL A      L 
Sbjct: 862  ----------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911

Query: 257  IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            +G+ +H   +++ F  +V VS +L++MY+K G V  A   F      +++SWN+MI++Y 
Sbjct: 912  LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971

Query: 317  EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA--DLGD-LERGIFVHKLLDQLKLGT 373
            +     EA+  F+ +L  G++P   T+   L AC+  D G+    G  VH    +  +  
Sbjct: 972  QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN 1031

Query: 374  DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            D  ++ +LI +YSK  K+D A  +        L SWNA++ GY ++ +  +AL +F  M 
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091

Query: 434  SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
               I  D  T+ + I A   L  ++  K I A  I+  F  +++V + ++DMY KCG + 
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151

Query: 494  TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
             A  LF  ++      W  MI GY  +G    A+ +++ M     +P++ TF   I A S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211

Query: 554  HSGLVEEGIHYFTSLKK-DYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
                +E+G     ++ K DY     +DH+   ++VD+  + G + +A+   +KM +   +
Sbjct: 1212 CLTALEQGKQIHANVVKLDYS----LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-V 1266

Query: 611  TVFGAMLGACKIHKNVE 627
              + AML     H +V+
Sbjct: 1267 VFWNAMLLGLAQHGHVD 1283



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 249/519 (47%), Gaps = 50/519 (9%)

Query: 96   EPIPDKLDALYHTMLKGYAKFASLDDAVSF----LIRMRYDDVAPVVYNYTYLLKVCGDV 151
            EP P  L      +L+ + K  S+    SF    L+  R+  ++     +  LL+    +
Sbjct: 567  EPQPGLLRV--KMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSSSSQWFSLLRSAIAM 624

Query: 152  GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +++ GK  H +++ +G   D +    ++ MY+KCG +  A ++FD+  +RDLV+WN+I+
Sbjct: 625  ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684

Query: 212  AGFAQNGFAELALD-------LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            A +AQ  FA+ + +       L   + E G     +T+  +L      G +++ + VHGY
Sbjct: 685  AAYAQ--FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 265  AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            A++ GF+  + VS ALV++Y K G V  ARL+FD M  R+ V WN M+ AYVE    +EA
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 325  MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
            +R F      G  P             D  +L      H ++     G +  ++N+    
Sbjct: 803  LRFFSAFHRSGFFP-------------DFSNL------HCVIG----GVNSDVSNNRKRH 839

Query: 385  YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
              + K    A  +F   QG  + +WN  +  +   G++  A++ F  +    I  DS T+
Sbjct: 840  AEQVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897

Query: 445  VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            V ++ A      +   + IHALVI+S F   V V  +L++MY+K G V  A   F    E
Sbjct: 898  VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE 957

Query: 505  RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
              + +WN MI  Y  + L   A+  F  +L    KP+  T    + ACS     +EG  Y
Sbjct: 958  LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG-EY 1013

Query: 565  FT--SLKKDYGIE--PVMDHY--GAMVDLLGRAGRLNEA 597
            FT  S    Y I+   + D +   A++DL  + G+++EA
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 230/510 (45%), Gaps = 39/510 (7%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            LK  +R    I+ SG          L++++ K  SL  A +VF+   D+    ++++L  
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 113  YAKFA-----SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
            YA+FA     ++ +       +R    +        LLK+C   G ++  + +HG  +  
Sbjct: 687  YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 168  GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
            GF LDLF    +VN+Y K G + +A  +FD+MPERD V WN ++  + +N F + AL   
Sbjct: 747  GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 228  TRMHEEGRRGDFITIVSILPAVANVGS---LRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +  H  G   DF  +  ++  V +  S    R  + V  YAM+                 
Sbjct: 807  SAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK----------------- 849

Query: 285  AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
                       +F   +  N+ +WN  +  ++  G    A+  F+ +L   +   +VT++
Sbjct: 850  -----------MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 345  EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
              L A     DL+ G  +H L+ +      V ++NSL++MYSK   V  A   F      
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958

Query: 405  TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA---ELSVIRYAK 461
             L+SWN MI  YAQN    EA+  F  +    +KPD FT+ SV+ A +   E        
Sbjct: 959  DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018

Query: 462  WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             +H   I+     + FV TALID+Y+K G +  A  L     +  + +WN ++ GY    
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078

Query: 522  LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              + A+E F+ M E     ++IT   AI A
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKA 1108



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 4/293 (1%)

Query: 52   SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
            +LK+ ++I    IK G  +     + ++ ++ K   + +A  +F  I    +  + TM+ 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 112  GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            GY +    D A+S    MR   V P  Y +  L+K    +  + +GK+IH  ++   +SL
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 172  DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            D F  T +V+MY KCG +++AY++F +M  R +V WN ++ G AQ+G  + AL+L   M 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 232  EEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
              G + D +T + +L A ++ G      K         G    +   + LVD   + GR+
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353

Query: 291  ETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            + A  V   M  +   S + +++ A    G+ E A R+  K+L   ++P++ +
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL--ALDPSDSS 1404



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%)

Query: 51   TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            T+L++ ++I   ++K      H   T LV ++CK  S+ DA RVF  +  +    ++ ML
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 111  KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVNGF 169
             G A+   +D+A++    M+ + + P    +  +L  C   G      K         G 
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 170  SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            + ++   + +V+   + G+I+EA  +   MP
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           ++  K  HA ++ S    + ++   LI MY+KCG++ +AR +FD  ++R + TWN ++  
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 517 YGTHGLGK-----AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE--EGIHYFTSLK 569
           Y                LF  + E       +T    +  C  SG V+  E +H +    
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV-- 744

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
              G E  +   GA+V++  + G + +A     KMP E    ++  ML A
Sbjct: 745 -KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 395/661 (59%), Gaps = 5/661 (0%)

Query: 157  GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            G++IH  +I + F+  +     ++NMY+K G +  A K F   PE DL+SWNT+++ +AQ
Sbjct: 913  GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 217  NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS---LRIGKAVHGYAMRAGFDSI 273
            N     A+     +  +G + D  T+ S+L A +         +G  VH YA++ G  + 
Sbjct: 973  NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032

Query: 274  VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
              VSTAL+D+Y+K G+++ A  +  G    ++ SWN+++  Y++     +A+  F  M +
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 334  QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             G+    +T+  A+ A   L +L++G  +     +L    D+ +++ ++ MY KC  +  
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 394  AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
            A ++F ++     V+W  MI GY +NG  + AL+ +  MR   ++PD +T  ++I A + 
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 454  LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            L+ +   K IHA V++  +  + FV T+L+DMY KCG+V  A  +F  M+ R V  WN M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 514  IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
            + G   HG    A+ LF  M     +P+ +TF+  +SACSHSGL  E   YF ++ K YG
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 574  IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
            I P ++HY  +VD LGRAGR+ EA + I  MP +   +++ A+LGAC+   + E  ++ A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392

Query: 634  NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++L  LDP +   +VLL+NIYAA+  WD +   R +M+ K ++K PG S +++KN+VH F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452

Query: 694  YSGSTKHPQSKRIYTFLETLIDEIKAAG-YVPDTN-SIHDVEDYVQENLLSSHSEKLAIA 751
                  HPQ+  IY  +E L+  I+  G YVPDT+ ++ DVE+  +E  L  HSEKLAIA
Sbjct: 1453 VVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIA 1512

Query: 752  FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            FGL+++ P +TI + KNLRVCGDCH+A K IS +T REI++RD +RFH F+NG CSCGDY
Sbjct: 1513 FGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDY 1572

Query: 812  W 812
            W
Sbjct: 1573 W 1573



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 253/503 (50%), Gaps = 8/503 (1%)

Query: 58   RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKF 116
            +I  L+IKS           L++++ K   +  A + F   P+ LD + ++TM+  YA+ 
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE-LDLISWNTMISSYAQN 973

Query: 117  ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGE-IRRGKEIHGQLIVNGFSLDL 173
                +A+     +  D + P  +    +L+ C  GD GE    G ++H   I  G   D 
Sbjct: 974  NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDS 1033

Query: 174  FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
            F  T ++++Y+K G+++EA  +     + DL SWN I+ G+ ++  +  AL+  + MHE 
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM 1093

Query: 234  GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            G   D IT+ + + A   + +L+ GK +  YA++ GF++ + VS+ ++DMY KCG +  A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153

Query: 294  RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
              +F  +   + V+W +MI+ Y+E G+ + A+ ++  M   GV+P   T    + A + L
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213

Query: 354  GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              LE+G  +H  + +L    D  +  SL+ MY KC  V  A  +F K+  + +V WNAM+
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 414  LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCF 472
            LG AQ+G V+EALN F  M+S  I+PD  T + V+ A +   +   A K+  A+      
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFN 531
               +   + L+D   + G +  A  +   M  +   + +  ++    T G  + A  + +
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVAD 1393

Query: 532  KMLE-GPTKPNDITFLCAISACS 553
            K+L   P+  +    L  I A S
Sbjct: 1394 KLLALDPSDSSAYVLLSNIYAAS 1416



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 263/557 (47%), Gaps = 38/557 (6%)

Query: 78   LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
            LV+++CKY  +  A  +F+ +P++   L++ MLK Y + +  D+A+ F          P 
Sbjct: 758  LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXP- 816

Query: 138  VYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
              +++ L  V G V  ++   ++ H +  V  +++ +F      N++A            
Sbjct: 817  --DFSNLHCVIGGVNSDVSNNRKRHAEQ-VKAYAMKMFPFDQGSNIFA------------ 861

Query: 197  DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
                      WN  +  F   G    A+D    +       D +T+V IL A      L 
Sbjct: 862  ----------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLD 911

Query: 257  IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            +G+ +H   +++ F  +V VS +L++MY+K G V  A   F      +++SWN+MI++Y 
Sbjct: 912  LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYA 971

Query: 317  EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA--DLGD-LERGIFVHKLLDQLKLGT 373
            +     EA+  F+ +L  G++P   T+   L AC+  D G+    G  VH    +  +  
Sbjct: 972  QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN 1031

Query: 374  DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            D  ++ +LI +YSK  K+D A  +        L SWNA++ GY ++ +  +AL +F  M 
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091

Query: 434  SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
               I  D  T+ + I A   L  ++  K I A  I+  F  +++V + ++DMY KCG + 
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151

Query: 494  TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
             A  LF  ++      W  MI GY  +G    A+ +++ M     +P++ TF   I A S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211

Query: 554  HSGLVEEGIHYFTSLKK-DYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
                +E+G     ++ K DY     +DH+   ++VD+  + G + +A+   +KM +   +
Sbjct: 1212 CLTALEQGKQIHANVVKLDYS----LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-V 1266

Query: 611  TVFGAMLGACKIHKNVE 627
              + AML     H +V+
Sbjct: 1267 VFWNAMLLGLAQHGHVD 1283



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 249/519 (47%), Gaps = 50/519 (9%)

Query: 96   EPIPDKLDALYHTMLKGYAKFASLDDAVSF----LIRMRYDDVAPVVYNYTYLLKVCGDV 151
            EP P  L      +L+ + K  S+    SF    L+  R+  ++     +  LL+    +
Sbjct: 567  EPQPGLLRV--KMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSSSSQWFSLLRSAIAM 624

Query: 152  GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +++ GK  H +++ +G   D +    ++ MY+KCG +  A ++FD+  +RDLV+WN+I+
Sbjct: 625  ADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSIL 684

Query: 212  AGFAQNGFAELALD-------LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            A +AQ  FA+ + +       L   + E G     +T+  +L      G +++ + VHGY
Sbjct: 685  AAYAQ--FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 265  AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            A++ GF+  + VS ALV++Y K G V  ARL+FD M  R+ V WN M+ AYVE    +EA
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 325  MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
            +R F      G  P             D  +L      H ++     G +  ++N+    
Sbjct: 803  LRFFSAFHRSGFXP-------------DFSNL------HCVIG----GVNSDVSNNRKRH 839

Query: 385  YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
              + K    A  +F   QG  + +WN  +  +   G++  A++ F  +    I  DS T+
Sbjct: 840  AEQVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897

Query: 445  VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            V ++ A      +   + IHALVI+S F   V V  +L++MY+K G V  A   F    E
Sbjct: 898  VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE 957

Query: 505  RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
              + +WN MI  Y  + L   A+  F  +L    KP+  T    + ACS     +EG  Y
Sbjct: 958  LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG-EY 1013

Query: 565  FT--SLKKDYGIE--PVMDHY--GAMVDLLGRAGRLNEA 597
            FT  S    Y I+   + D +   A++DL  + G+++EA
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 230/510 (45%), Gaps = 39/510 (7%)

Query: 53   LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
            LK  +R    I+ SG          L++++ K  SL  A +VF+   D+    ++++L  
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 113  YAKFA-----SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
            YA+FA     ++ +       +R    +        LLK+C   G ++  + +HG  +  
Sbjct: 687  YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 168  GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
            GF LDLF    +VN+Y K G + +A  +FD+MPERD V WN ++  + +N F + AL   
Sbjct: 747  GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 228  TRMHEEGRRGDFITIVSILPAVANVGS---LRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +  H  G   DF  +  ++  V +  S    R  + V  YAM+                 
Sbjct: 807  SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK----------------- 849

Query: 285  AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
                       +F   +  N+ +WN  +  ++  G    A+  F+ +L   +   +VT++
Sbjct: 850  -----------MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 345  EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
              L A     DL+ G  +H L+ +      V ++NSL++MYSK   V  A   F      
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958

Query: 405  TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA---ELSVIRYAK 461
             L+SWN MI  YAQN    EA+  F  +    +KPD FT+ SV+ A +   E        
Sbjct: 959  DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018

Query: 462  WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             +H   I+     + FV TALID+Y+K G +  A  L     +  + +WN ++ GY    
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078

Query: 522  LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              + A+E F+ M E     ++IT   AI A
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKA 1108



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 4/293 (1%)

Query: 52   SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
            +LK+ ++I    IK G  +     + ++ ++ K   + +A  +F  I    +  + TM+ 
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173

Query: 112  GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            GY +    D A+S    MR   V P  Y +  L+K    +  + +GK+IH  ++   +SL
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 172  DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            D F  T +V+MY KCG +++AY++F +M  R +V WN ++ G AQ+G  + AL+L   M 
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 232  EEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
              G + D +T + +L A ++ G      K         G    +   + LVD   + GR+
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353

Query: 291  ETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            + A  V   M  +   S + +++ A    G+ E A R+  K+L   ++P++ +
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL--ALDPSDSS 1404



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%)

Query: 51   TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            T+L++ ++I   ++K      H   T LV ++CK  S+ DA RVF  +  +    ++ ML
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 111  KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVNGF 169
             G A+   +D+A++    M+ + + P    +  +L  C   G      K         G 
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 170  SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            + ++   + +V+   + G+I+EA  +   MP
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           ++  K  HA ++ S    + ++   LI MY+KCG++ +AR +FD  ++R + TWN ++  
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 517 YGTHGLGK-----AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE--EGIHYFTSLK 569
           Y                LF  + E       +T    +  C  SG V+  E +H +    
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV-- 744

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
              G E  +   GA+V++  + G + +A     KMP E    ++  ML A
Sbjct: 745 -KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 278/750 (37%), Positives = 409/750 (54%), Gaps = 19/750 (2%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV ++ +  SL  A  VF  I  K   L+  ++  Y        A++   R+  + 
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           +A     +  +L  C     +  G+ IH   +  G  L     + +V+MY +CG + +A 
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183

Query: 194 KMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            +F  +    D+V WN ++   +QNG    AL++  RM + G   D +T VS+  A ++ 
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243

Query: 253 GSLRIG--KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            SLR    K  H      G  S V V+TALV+ YA+CG ++ AR  F  M  RN VSW S
Sbjct: 244 PSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTS 303

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MIAA+ + G+   A+  F  ML +GV PT  T+  AL  C DL        V  +  ++ 
Sbjct: 304 MIAAFTQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCEDL---RVARLVEAIAQEIG 359

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGKTLVSWNA-----MILGYAQNGRVNE 424
           + TDV++   L+  Y++C   + A  +FS + +G+    W+A     MI  YAQ      
Sbjct: 360 VVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGE----WDAALVTAMIAVYAQCRDRRS 415

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
               +     + I PD    ++ + A A L+ +   + IHA V      +++V +  A++
Sbjct: 416 TFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIV 475

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MY +CG++  AR  FD M  R   +WN M+     HG  +   +LF  ML+       I
Sbjct: 476 SMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERI 535

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
            FL  +SAC+H+GLV+ G  +F+++  D+G+ P  +HYG MVDLLGR GRL +A   +Q 
Sbjct: 536 AFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQA 595

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+ P    + A++GAC+I+ + E G  AA R+ EL  D    +V L NIY+AA  WD  
Sbjct: 596 MPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDA 655

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A VR IM   GL+K PG S +E++++VH F      HPQS+ IY  LE ++  I+ AGY 
Sbjct: 656 AAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYR 715

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
             T  + HDVE+  +E LL  HSEKLAIAFG++++  GST+ + KNLRVC DCHNA+K+I
Sbjct: 716 AVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFI 775

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V GREI+VRD+ RFH FK+G CSCGDYW
Sbjct: 776 SKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 17/498 (3%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFD 197
           ++    +++  +   I RGK +H ++  +     D +  + +V MY +CG +E A  +F 
Sbjct: 27  FDSAAAVRLVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFH 86

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           ++  + +V W  +++ +   G +  A+ L  R+ +EG   D I  VS+L A ++   L  
Sbjct: 87  KIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAA 146

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYV 316
           G+ +H  A+ AG      V++ALV MY +CG +  A  +F  ++   +VV WN+MI A  
Sbjct: 147 GRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANS 206

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTD 374
           + G+P EA+ IF +ML  G+ P  VT +    AC+    L        H  LD+  LG+D
Sbjct: 207 QNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSD 266

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  +L++ Y++C ++D A   F+++  +  VSW +MI  + Q G +  A+  F  M  
Sbjct: 267 VVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLL 325

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + + P   T+ + +    +L   R A+ + A+        +V ++T L+  YA+C     
Sbjct: 326 EGVVPTRSTLFAALEGCEDL---RVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQED 382

Query: 495 ARALFDMMNERHVTTWN-----VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           A  +F   + R    W+      MI  Y      ++  +L+   +E    P+ I ++ A+
Sbjct: 383 AIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITAL 439

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
            AC+    + EG      +  D  ++  +    A+V + G+ G L +A D    MP    
Sbjct: 440 DACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDE 499

Query: 610 ITVFGAMLGACKIHKNVE 627
           I+ + AML A   H  VE
Sbjct: 500 IS-WNAMLSASAQHGRVE 516



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 246/567 (43%), Gaps = 60/567 (10%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+S   L   R I    +++GL  Q +  + LVS++ +  SL DA  +F  +   L
Sbjct: 134 VLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHL 193

Query: 103 D-ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--KE 159
           D  L++ M+   ++  S  +A+    RM    + P +  +  + K C     +R    K 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKG 253

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            H  L   G   D+   T +VN YA+CG+I+ A K F  MPER+ VSW +++A F Q G 
Sbjct: 254 FHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGH 313

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
               L  V   H     G   T  ++  A+     LR+ + V   A   G  + V + T 
Sbjct: 314 ----LLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTD 369

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWN-----SMIAAYVEGGNPEEAMRIFQKMLDQ 334
           LV  YA+C   E A  VF    +R    W+     +MIA Y +  +     +++   +++
Sbjct: 370 LVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER 426

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMYSKCKKVDR 393
           G+ P  +  + AL ACA L  L  G  +H  +    +L  DV++ N+++SMY +C  +  
Sbjct: 427 GISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRD 486

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A D F  +  +  +SWNAM+   AQ+GRV +  + F  M  +    +    ++++ A A 
Sbjct: 487 ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACA- 545

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
                     HA ++++  E             A  G  G   A            +  M
Sbjct: 546 ----------HAGLVKAGCEH----------FSAMTGDHGVVPA---------TEHYGCM 576

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           +D  G  G    A  +   M   P  P+  T++  + AC   G  E G         +  
Sbjct: 577 VDLLGRKGRLADAHGIVQAM---PVPPDAATWMALMGACRIYGDTERG-----RFAAERV 628

Query: 574 IEPVMDH---YGAMVDLLGRAGRLNEA 597
           +E   DH   Y A+ ++   AGR ++A
Sbjct: 629 LELRADHTAAYVALCNIYSAAGRWDDA 655


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/772 (35%), Positives = 428/772 (55%), Gaps = 10/772 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L+VC  L +    R++    +KSG  +     T LV ++ K     D   +F+ +  K  
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             + ++L GYA+    D+ +  + +M+ + V P  + +  +L    D   I  G ++H  
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++ NGF    F    ++ MY K   + +A  +FD M  RD V+WN ++ G+A  GF    
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             +  RM   G +       + L   +    L   K +H   ++ G++   ++ TAL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 284 YAKCGRVETARLVFD-GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           Y+KC  V+ A  +F     + NVV+W +MI  +V+  N ++A+ +F +M  +GV P + T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFT 410

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L A      L +   +H  + +       S+  +L+  Y K   V  +A +F  + 
Sbjct: 411 YSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE-LSVIRYAK 461
            K +V+W+AM+ G AQ     +A+  F ++  + +KP+ +T  SVI A +   + + + K
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA  ++S     + V +AL+ MY+K G + +A  +F    ER + +WN MI GYG HG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             K A+E+F  M       +D+TF+  ++AC+H+GLVEEG  YF  + KDY I+   +HY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY 646

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDL  RAG  ++A D I  MP     T++  +L AC++H+N+ELG+ AA +L  L P
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           ++   +VLL+NI+A A  W++ A VR +M+++ ++K  GCS +E+KN + SF +G   HP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            S  +Y  LE L  ++K  GY PDTN + HDVE+  +E +LS HSE+LAIA+GL+   PG
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I I KNLR+CGDCHN  + ISL+  R +IVRD +RFH FK GVCSCG YW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 288/614 (46%), Gaps = 51/614 (8%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+  P K  + Y+ +L  +++     +A+     +    +       +  LKVCG 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   G+++H Q + +GF  D+   T +V+MY K    E+   +FD M  +++VSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++G+A+NG  +  + L+ +M  EG   +  T  ++L A+A+   +  G  VH   ++ GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           +    V  AL+ MY K   V  A  VFD M  R+ V+WN MI  Y   G   E  ++F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVH--KLLDQLKLGTDVSMTNSLISMYSKC 388
           M   GV+ +      AL  C+   +L     +H   + +  +   D+    +L+  YSKC
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR--TALMVTYSKC 354

Query: 389 KKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
             VD A  +FS       +V+W AMI G+ QN    +A++ FC+M  + ++P+ FT  +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +              +HA +I++ +EK   V TAL+D Y K G V  +  +F  +  + +
Sbjct: 415 LAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS-GLVEEG--IH- 563
             W+ M+ G       + A+E+F ++++   KPN+ TF   I+ACS S   VE G  IH 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 564 ----------------YFTSLKKDYGIEPV-----------MDHYGAMVDLLGRAGRLNE 596
                             T   K   IE             +  + +M+   G+ G   +
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKK 590

Query: 597 AWDFIQKM-----PIEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGGYHV 648
           A +  Q M     P++     F  +L AC     VE GEK  N +   + +D     Y  
Sbjct: 591 ALEVFQIMQNQGLPLDD--VTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSC 648

Query: 649 LLANIYAAASMWDK 662
           ++ ++Y+ A M+DK
Sbjct: 649 MV-DLYSRAGMFDK 661



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 161/333 (48%), Gaps = 5/333 (1%)

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           R   A  +FD    +++  +N ++  +    +  EA+ +F+ +   G+    +T+  AL 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 349 ACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
            C  L D   G  VH     LK G   DVS+  SL+ MY K +  +    IF ++  K +
Sbjct: 113 VCGVLFDQVVGRQVH--CQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSW +++ GYA+NG  +E ++   +M+ + + P+ FT  +V+ ALA+ S+I     +HA+
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           ++++ FE   FV  ALI MY K   VG A A+FD M  R   TWN+MI GY   G     
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            ++F++M     K +   F  A+  CS    +         + K+ G E   D   A++ 
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKN-GYEFAQDIRTALMV 349

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
              +   ++EA+           +  + AM+G 
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/688 (38%), Positives = 392/688 (56%), Gaps = 33/688 (4%)

Query: 158 KEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           K++H Q++ +        +   V++  A    ++ A  +F+ +P+ +    N  +   ++
Sbjct: 40  KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSR 99

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +   E  L +  RM  +G   D  +   +L A++ V SL  G  +HG A + GFDS   V
Sbjct: 100 SEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFV 159

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            T LV MYA CGR+  ARL+FD M  R+VV+W+ MI  Y + G   +A+ +F++M +  V
Sbjct: 160 QTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           EP  + +   L AC   G+L  G  +H  + +  +  D  + ++L++MY+ C  +D A +
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279

Query: 397 IFSKLQGKTLVS-------------------------------WNAMILGYAQNGRVNEA 425
           +F K+  K LV+                               W+AMI GYA++    EA
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           LN F +M+S  IKPD  TM+SVI A A L  +  AKWIH  V ++ F   + +  ALI+M
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEM 399

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           YAKCG++  AR +FD M  ++V +W  MI  +  HG   +A+  F++M +   +PN ITF
Sbjct: 400 YAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITF 459

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  + ACSH+GLVEEG   F S+  ++ I P   HYG MVDL GRA  L EA + ++ MP
Sbjct: 460 VGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMP 519

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           + P + ++G+++ AC++H  +ELGE AA RL ELDPD  G HV L+NIYA A  W+ + +
Sbjct: 520 LAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQ 579

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           VR +M+ KG+ K  GCS  EL NE+H F      H  +  IY  L  ++ ++K  GY P+
Sbjct: 580 VRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPN 639

Query: 726 TNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
           T SI  D+E+  ++ ++  HSEKLA+ +GL+    GS I I KNLRVC DCH   K  S 
Sbjct: 640 TCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASK 699

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           V  REI+VRD  RFH +K+GVCSC DYW
Sbjct: 700 VYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 178/578 (30%), Positives = 275/578 (47%), Gaps = 80/578 (13%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD-AARVFEPIPDKLDAL 105
           L   TSL  L+++   I++S L        KLV   C  +S  D A  VF  IP     L
Sbjct: 30  LSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHL 89

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            +  L+  ++    +  +    RMR   +A   +++  LLK    V  +  G EIHG   
Sbjct: 90  CNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAA 149

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             GF  D F  TG+V MYA CG+I EA  MFD+M  RD+V+W+ ++ G+ Q+G    AL 
Sbjct: 150 KLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALL 209

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M       D + + ++L A    G+L  GK +H + M        ++ +ALV MYA
Sbjct: 210 LFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269

Query: 286 KC-------------------------------GRVETARLVFDGMKSRNVVSWNSMIAA 314
            C                               G++E AR VF+ M  +++V W++MI+ 
Sbjct: 270 SCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISG 329

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y E  +P+EA+ +F +M   G++P  VT++  + ACA LG L++  ++H  +D+   G  
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + + N+LI MY+KC  ++RA  IF K+  K ++SW  MI  +A +G    AL +F +M  
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMED 449

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +NI+P+  T V V+ A +           HA                        G V  
Sbjct: 450 ENIEPNGITFVGVLYACS-----------HA------------------------GLVEE 474

Query: 495 ARALF-DMMNERHVTTWNV----MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
            R +F  M+NE ++T  +V    M+D +G   L + A+EL   M   P  PN I +   +
Sbjct: 475 GRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---PLAPNVIIWGSLM 531

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +AC   G +E G   F + K+   ++P  DH GA V L
Sbjct: 532 AACRVHGEIELG--EFAA-KRLLELDP--DHDGAHVFL 564


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/827 (34%), Positives = 436/827 (52%), Gaps = 77/827 (9%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L + RR+L   IK      H     +++ + K  SLSDA  +F+ +P +  A ++T+
Sbjct: 52  CGALSDARRLLRADIKEPNVITH---NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTL 108

Query: 110 LKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           + GY +     D +   + M R  D  P  + +  ++K CG +G      ++ G      
Sbjct: 109 MSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFD 168

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------------------------------ 198
           F  D    T +V+M+ +CG ++ A ++F +                              
Sbjct: 169 FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 228

Query: 199 -MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ERD+VSWN ++A  +Q+G    AL LV  MH +G R D  T  S L A A + SL  
Sbjct: 229 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 288

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H   +R+       V++AL+++YAKCG  + A+ VF+ ++ RN VSW  +I   ++
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                +++ +F +M  + +      +   +  C +  DL  G  +H L  +      + +
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN- 436
           +NSLIS+Y+KC  +  A  +FS +  + +VSW +MI  Y+Q G + +A  +F  M ++N 
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNA 468

Query: 437 -------------------------------IKPDSFTMVSVIPALAELSVIRYAKWIHA 465
                                          + PD  T V++    A++   +    I  
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             +++    NV V  A I MY+KCG +  A+ LFD++N + V +WN MI GY  HG+GK 
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A + F+ ML    KP+ I+++  +S CSHSGLV+EG  YF  + + +GI P ++H+  MV
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG L EA D I KMP++P   V+GA+L ACKIH N EL E AA  +FELD  + G
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSG 708

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            ++LLA IY+ A   D  A+VR +M  KG++K PG S +E++N+VH F +    HPQ   
Sbjct: 709 SYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIA 768

Query: 706 IYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           I   L+ L+++I   GYV   +   ++           HSEKLA+AFG+++      IHI
Sbjct: 769 IRNKLDELMEKIAHLGYVRTESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHI 818

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLR+CGDCH   K IS VT RE ++RD  RFH FK+G CSCGDYW
Sbjct: 819 MKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 220/496 (44%), Gaps = 68/496 (13%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV------------------------ 180
           L+ CG  G +   + +HG+L+  G +  +F    ++                        
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70

Query: 181 --------NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                   N YAK G + +A ++FDRMP RD+ SWNT+++G+ Q       L+    MH 
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 233 EGRR-GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            G    +  T   ++ +   +G   +   + G   +  F    +V TALVDM+ +CG V+
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190

Query: 292 TA-RLV------------------------------FDGMKSRNVVSWNSMIAAYVEGGN 320
            A RL                               F+ M  R+VVSWN MIAA  + G 
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA+ +  +M  +GV   + T   +L ACA L  L  G  +H  + +     D  + ++
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI +Y+KC     A  +F+ LQ +  VSW  +I G  Q    ++++  F +MR++ +  D
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            F + ++I        +   + +H+L ++S   + + V  +LI +YAKCG +  A  +F 
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M+ER + +W  MI  Y   G    A E F    +G    N IT+   + A    G  E+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFF----DGMDTRNAITWNAMLGAYIQHGAEED 486

Query: 561 GIHYFTSLKKDYGIEP 576
           G+  ++++     + P
Sbjct: 487 GLKMYSAMLSQKDVTP 502



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 163/377 (43%), Gaps = 66/377 (17%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL----- 295
            +   L +  + G+L   +A+HG  +  G  S V +   L+  Y  CG +  AR      
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 296 ---------------------------VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                                      +FD M  R+V SWN++++ Y +     + +  F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 329 QKMLDQGVE-PTNVTIMEALHACADLG---------------------DLERGI------ 360
             M   G   P   T    + +C  LG                     D+E  +      
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 361 -----FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
                F  +L  Q++  T +   NS+++ Y+K   +D A + F  +  + +VSWN MI  
Sbjct: 186 CGYVDFASRLFSQIERPT-IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            +Q+GRV EAL    +M  K ++ DS T  S + A A L  + + K +HA VIRS  + +
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            +V +ALI++YAKCG+   A+ +F+ + +R+  +W V+I G   +     +VELFN+M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 536 GPTKPNDITFLCAISAC 552
                +       IS C
Sbjct: 365 ELMAIDQFALATLISGC 381



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 48/337 (14%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++ A  +C  L D  R      LL       +V   N +++ Y+K   +  A ++F ++
Sbjct: 44  TLLHAYFSCGALSDARR------LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYA 460
             + + SWN ++ GY Q  R  + L  F  M RS +  P++FT   V+ +   L     A
Sbjct: 98  PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM------------------- 501
             +  L  +  F  +  V TAL+DM+ +CG V  A  LF                     
Sbjct: 158 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217

Query: 502 ------------MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
                       M ER V +WN+MI      G  + A+ L  +M     + +  T+  ++
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEA---WDFIQ-K 603
           +AC+    +  G      + +     P +D Y   A+++L  + G   EA   ++ +Q +
Sbjct: 278 TACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
             +   + + G++   C   K+VEL  +    L  +D
Sbjct: 335 NSVSWTVLIGGSLQYEC-FSKSVELFNQMRAELMAID 370


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/629 (41%), Positives = 392/629 (62%), Gaps = 11/629 (1%)

Query: 195 MFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +F+R  ++ D+ SWN+++A  A++G +  AL   + M +        +    + A +++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +  GK  H  A   G+ S + VS+AL+ MY+ CG++E AR VFD +  R++VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150

Query: 314 AYVEGGNPEEAMRIFQKML------DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            Y   GN  +A+ +F+ +L      D  +   ++ ++  + AC+ +        +H  + 
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 368 QLKLGTDVSMTNSLISMYSKCKK--VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +      VS+ N+L+  Y+K  +  V  A  IF ++  K  VS+N+++  YAQ+G  NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 426 LNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
              F ++ ++K +  ++ T+ +V+ A++    +R  K IH  VIR   E +V V T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY KCG V TAR  FD M  ++V +W  MI GYG HG    A+ELF  M++   +PN IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH+GL  EG  +F ++K  +G+EP ++HYG MVDLLGRAG L +A+D IQ+M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
            ++P   ++ ++L AC+IHKNVEL E +  RLFELD    GY++LL++IYA A  W  + 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR IM+ +GL K PG SL+EL  EVH F  G  +HPQ ++IY FL  L  ++  AGYV 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +T+S+ HDV++  +E  L  HSEKLAIAFG++N+ PGST+++ KNLRVC DCHN  K IS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  RE +VRD  RFH FK+G CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 227/443 (51%), Gaps = 20/443 (4%)

Query: 80  SLFCKYNSLSDAAR---------VFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRM 129
           +LFC  + L    R         +F    DK D   +++++   A+     +A+     M
Sbjct: 8   ALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM 67

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   + P   ++   +K C  + +I  GK+ H Q  V G+  D+F  + ++ MY+ CG++
Sbjct: 68  RKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKL 127

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM------HEEGRRGDFITIV 243
           E+A K+FD +P+RD+VSW +++ G+  NG A  A+ L   +       ++    D + +V
Sbjct: 128 EDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--VETARLVFDGMK 301
           S++ A + V +  + +++H + ++ GFD  V+V   L+D YAK G   V  AR +FD + 
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGI 360
            ++ VS+NS+++ Y + G   EA  +F++++   V   N +T+   L A +  G L  G 
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + ++ L  DV +  S+I MY KC +V+ A   F +++ K + SW AMI GY  +G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVM 479
              +AL  F  M    ++P+  T VSV+ A +   + +   +W +A+  R   E  +   
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427

Query: 480 TALIDMYAKCGAVGTARALFDMM 502
             ++D+  + G +  A  L   M
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRM 450



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 9/289 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS----FLIRMR 130
            + L+ ++     L DA +VF+ IP +    + +M++GY    +  DAVS     L+   
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173

Query: 131 YDDVAPVV--YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
            DD A  +       ++  C  V      + IH  +I  GF   +     +++ YAK G+
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233

Query: 189 --IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSI 245
             +  A K+FD++ ++D VS+N+I++ +AQ+G +  A ++  R+   +    + IT+ ++
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L AV++ G+LRIGK +H   +R G +  V V T+++DMY KCGRVETAR  FD MK++NV
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            SW +MIA Y   G+  +A+ +F  M+D GV P  +T +  L AC+  G
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 13/232 (5%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+ I DK    Y++++  YA+    ++A     R+  + V  V +N   L  V   
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV--VTFNAITLSTVLLA 296

Query: 151 V---GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           V   G +R GK IH Q+I  G   D+   T +++MY KCG++E A K FDRM  +++ SW
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG----SLRIGKAVHG 263
             ++AG+  +G A  AL+L   M + G R ++IT VS+L A ++ G      R   A+ G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
              R G +  +     +VD+  + G ++ A  +   MK + + + W+S++AA
Sbjct: 417 ---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 10/197 (5%)

Query: 43  SALLLEVCTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           S +LL V  S  L+  + I   +I+ GL D  +  T ++ ++CK   +  A + F+ + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--- 157
           K    +  M+ GY        A+     M    V P    +  +L  C   G    G   
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410

Query: 158 -KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFA 215
              + G+    G    L     +V++  + G +++AY +  RM  + D + W++++A   
Sbjct: 411 FNAMKGRF---GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467

Query: 216 QNGFAELALDLVTRMHE 232
            +   ELA   V R+ E
Sbjct: 468 IHKNVELAEISVARLFE 484


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 277/774 (35%), Positives = 439/774 (56%), Gaps = 19/774 (2%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           L  C  L+ +R+I   I  SG    ++F   ++V  + K  S++ A   F+ I  K D  
Sbjct: 34  LRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + +ML  YA+      A+    RM   D+ P    YT +L  C  +  +  GK IH ++ 
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148

Query: 166 -VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELA 223
              G  LD+     ++ MYAKCG +E+A ++F+RM   R + SWN ++A +AQ+G  E A
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           + L   M  E       T  S+L A +N+G L  G+ +H      G +  +++  AL+ M
Sbjct: 209 IRLYEDMDVEP---SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 265

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YA+C  ++ A  +F  +  R+VVSW++MIAA+ E    +EA+  + KM  +GV P   T 
Sbjct: 266 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTF 325

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKL 401
              L ACA +GDL  G  VH  +  L  G  +++ N  +L+ +Y+    +D A  +F ++
Sbjct: 326 ASVLLACASVGDLRAGRAVHDQI--LGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS-VIPALAELSVIRYA 460
           + +    W  +I GY++ G     L  + +M++    P +  + S VI A A L     A
Sbjct: 384 ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADA 443

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           +  H+ +       +  + T+L++MY++ G + +AR +FD M+ R    W  +I GY  H
Sbjct: 444 RQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKH 503

Query: 521 GLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           G    A+ L+ +M LEG  +P+++TF+  + ACSH+GL E+G   F S++ DY + P + 
Sbjct: 504 GEHGLALGLYKEMELEG-AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIA 562

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  ++DLL RAGRL++A + I  MP+EP    + ++LGA +IHK+V+    AA ++ +L
Sbjct: 563 HYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKL 622

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP +   +VLL+N++A       +A VR  M  +G++K  G S +E+ +++H F  G   
Sbjct: 623 DPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNS 682

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HP+ + I+  L+ L  +IK AGYVP++  + HDV +  +E LL  HSEKLAIAFGL+ ++
Sbjct: 683 HPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATA 742

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           PG+T+ I   LR+C DCH+A K+IS +  REIIVRD  RFH F++G CSCGDYW
Sbjct: 743 PGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/750 (36%), Positives = 409/750 (54%), Gaps = 19/750 (2%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV ++ +  SL  A  VF  I  K   L+  ++  Y        A++   R+  + 
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           +A     +  +L  C     +  G+ IH   +  G  L     + +V+MY +CG + +A 
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183

Query: 194 KMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            +F  +    D+V WN ++   +QNG    AL++  RM + G   D +T VS+  A ++ 
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243

Query: 253 GSLRIG--KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            SLR    K  H      G  S V V+TALV+ YA+CG ++ AR  F  M  RN VSW S
Sbjct: 244 PSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTS 303

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MIAA+ + G+   A+  F  ML +GV PT  T+  AL  C DL        V  +  ++ 
Sbjct: 304 MIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCEDL---HTARLVEAIAQEIG 359

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGKTLVSWNA-----MILGYAQNGRVNE 424
           + TDV++   L+  Y++C   + A  +FS + +G+    W+A     MI  YAQ      
Sbjct: 360 VATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGE----WDAALVTAMIAVYAQCRDRRS 415

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
               +     + I PD    ++ + A A L+ +   + IHA V      +++V +  A++
Sbjct: 416 TFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIV 475

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MY +CG++  AR  FD M  R   +WN M+     HG  +   +LF  ML+       +
Sbjct: 476 SMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERV 535

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
            FL  +SAC+H+GLVE G  +F+++  D+G+ P  +HYG MVDLLGR GRL +A   +Q 
Sbjct: 536 AFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQA 595

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+ P    + A++GAC+I+ + E G  AA R+ EL  +    +V L NIY+AA  W+  
Sbjct: 596 MPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDA 655

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A VR IM   GL+K PG S +E++++VH F      HPQS+ IY  LE ++  I+ AGY 
Sbjct: 656 AAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYR 715

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
             T  + HDVE+  +E LL  HSEKLAIAFG++++  GST+ + KNLRVC DCHNA+K+I
Sbjct: 716 AVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFI 775

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V GREI+VRD+ RFH FK+G CSCGDYW
Sbjct: 776 SKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 17/498 (3%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFD 197
           ++    +++  +   I RGK +H ++  +     D +  + +V MY +CG +E A  +F 
Sbjct: 27  FDSAAAVRLVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFH 86

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           ++  + +V W  +++ +   G +  A+ L  R+ +EG   D I  VS+L A ++   L  
Sbjct: 87  KIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAA 146

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYV 316
           G+ +H  A+ AG      V++ALV MY +CG +  A  +F  ++   +VV WN+MI A  
Sbjct: 147 GRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANS 206

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTD 374
           + G+P EA+ IF +ML  G+ P  VT +    AC+    L        H  LD+  LG+D
Sbjct: 207 QNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSD 266

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  +L++ Y++C ++D A + F+ +  +  VSW +MI  +AQ G +  A+  F  M  
Sbjct: 267 VVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLL 325

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + + P   T+ + +    +L     A+ + A+        +V ++T L+  YA+C     
Sbjct: 326 EGVVPTRSTLFAALEGCEDLHT---ARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQED 382

Query: 495 ARALFDMMNERHVTTWN-----VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           A  +F   + R    W+      MI  Y      ++  +L+   +E    P+ I ++ A+
Sbjct: 383 AIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITAL 439

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
            AC+    + EG      +  D  ++  +    A+V + G+ G L +A D    MP    
Sbjct: 440 DACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDE 499

Query: 610 ITVFGAMLGACKIHKNVE 627
           I+ + AML A   H  VE
Sbjct: 500 IS-WNAMLSASAQHGRVE 516



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 199/424 (46%), Gaps = 19/424 (4%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+S   L   R I    +++GL  Q +  + LVS++ +  SL DA  +F  +   L
Sbjct: 134 VLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHL 193

Query: 103 D-ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--KE 159
           D  L++ M+   ++  S  +A+    RM    + P +  +  + K C     +R    K 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKG 253

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            H  L   G   D+   T +VN YA+CG+I+ A + F  MPER+ VSW +++A FAQ G 
Sbjct: 254 FHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGH 313

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
               L  V   H     G   T  ++  A+     L   + V   A   G  + V + T 
Sbjct: 314 ----LLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTD 369

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWN-----SMIAAYVEGGNPEEAMRIFQKMLDQ 334
           LV  YA+C   E A  VF    +R    W+     +MIA Y +  +     +++   +++
Sbjct: 370 LVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER 426

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMYSKCKKVDR 393
           G+ P  +  + AL ACA L  L  G  +H  +    +L  DV++ N+++SMY +C  +  
Sbjct: 427 GISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRD 486

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A D F  +  +  +SWNAM+   AQ+GRV +  + F  M  +    +    ++++ A A 
Sbjct: 487 ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAH 546

Query: 454 LSVI 457
             ++
Sbjct: 547 AGLV 550


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/573 (43%), Positives = 361/573 (63%), Gaps = 6/573 (1%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L     +G L+ GK VH + M + F + + +  +++ MYAKCG +E AR VFD M  ++
Sbjct: 97  LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156

Query: 305 VVSWNSMIAAYVEGG---NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           VV+W SMI  Y + G   +   A+ +F +M+  G+ P    +   +  C  LG    G  
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H    +     +V + +SL+ MY++C ++  +  +F +L+ K  VSWNA+I G+A+ G 
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             EAL  F KM+ +      FT  +++ + +    +   KW+HA +++S  +   +V   
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKP 540
           L+ MYAK G +  A+ +FD + +  V + N M+ GY  HGLGK AVELF +M L    +P
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEP 396

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           NDITFL  ++ACSH+GL++EG++YF  +KK YG+EP + HY  +VDL GRAG L++A  F
Sbjct: 397 NDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSF 455

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I++MPIEP  T++GA+LGA K+HKN E+G  AA ++ ELDP   G H LL+NIYA+A  W
Sbjct: 456 IEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQW 515

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             +AKVR  M+  GL+K P CS VE++N VH F +    HPQ  ++Y   E L  +IK  
Sbjct: 516 KDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEI 575

Query: 721 GYVPDTNSIHDVEDYVQENL-LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDT+ +H   D  ++ L L  HSEKLA+AF LLN+ PGS I I KN+RVCGDCH+A 
Sbjct: 576 GYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAI 635

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KY+SLV  REIIVRD +RFH F++G CSC DYW
Sbjct: 636 KYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 226/419 (53%), Gaps = 10/419 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LLK C  +G++++GK +H  L+ + F  DL     ++ MYAKCG +E A ++FD M 
Sbjct: 94  YNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC 153

Query: 201 ERDLVSWNTIVAGFAQNGFAE---LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +D+V+W +++ G++Q+G+A     AL L   M  +G R +   + S++     +GS   
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +HG   + GF   V V ++LVDMYA+CG +  +RLVFD ++S+N VSWN++I+ +  
Sbjct: 214 GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFAR 273

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS- 376
            G  EEA+ +F KM  +G   T  T    L + +  G LE+G ++H  +  +K G  +  
Sbjct: 274 KGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM--MKSGKKLVG 331

Query: 377 -MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-S 434
            + N+L+ MY+K   +  A  +F +L    +VS N+M++GYAQ+G   EA+  F +M   
Sbjct: 332 YVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLW 391

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             I+P+  T +SV+ A +   ++    +   L+ +   E  +   T ++D++ + G +  
Sbjct: 392 VEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQ 451

Query: 495 ARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
           A++  + M  E + T W  ++     H   +       K+LE  P  P   T L  I A
Sbjct: 452 AKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA 510



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 204/377 (54%), Gaps = 11/377 (2%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ CT L +L++   +   ++ S   +  + +  ++ ++ K  SL  A +VF+ +  K 
Sbjct: 97  LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156

Query: 103 DALYHTMLKGYAK---FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
              + +M+ GY++    +S   A+   + M  D + P  +  + L+K CG +G    GK+
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IHG     GF  ++F  + +V+MYA+CG++ E+  +FD +  ++ VSWN +++GFA+ G 
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL L  +M  EG      T  ++L + +  GSL  GK +H + M++G   +  V   
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK-MLDQGVEP 338
           L+ MYAK G +  A+ VFD +   +VVS NSM+  Y + G  +EA+ +F++ ML   +EP
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEP 396

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            ++T +  L AC+  G L+ G++  +L+ +  L   +S   +++ ++ +   +D+A    
Sbjct: 397 NDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFI 456

Query: 399 SKLQGKTLVSWNAMILG 415
            ++     +  NA I G
Sbjct: 457 EEMP----IEPNATIWG 469



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 129/245 (52%), Gaps = 3/245 (1%)

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
           N    + +   + +  +EP      + L  C  LG L++G  VH  L   K   D+ + N
Sbjct: 71  NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE---ALNYFCKMRSKN 436
           S++ MY+KC  ++ A  +F ++  K +V+W +MI GY+Q+G  +    AL  F +M    
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P+ F + S++     L      K IH    +  F++NVFV ++L+DMYA+CG +  +R
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESR 250

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +FD +  ++  +WN +I G+   G G+ A+ LF KM        + T+   + + S +G
Sbjct: 251 LVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTG 310

Query: 557 LVEEG 561
            +E+G
Sbjct: 311 SLEQG 315


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 285/827 (34%), Positives = 436/827 (52%), Gaps = 77/827 (9%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L + RR+L   IK      H     +++ + K  SLSDA  +F+ +P +  A ++T+
Sbjct: 52  CGALSDARRLLRADIKEPNVITH---NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTL 108

Query: 110 LKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           + GY +     D +   + M R  D  P  + +  ++K CG +G      ++ G      
Sbjct: 109 MSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFD 168

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------------------------------ 198
           F  D    T +V+M+ +CG ++ A ++F +                              
Sbjct: 169 FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 228

Query: 199 -MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ERD+VSWN ++A  +Q+G    AL LV  MH +G R D  T  S L A A + SL  
Sbjct: 229 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 288

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H   +R+       V++AL+++YAKCG  + A+ VF+ ++ RN VSW  +I   ++
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                +++ +F +M  + +      +   +  C +  DL  G  +H L  +      + +
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN- 436
           +NSLIS+Y+KC  +  A  +FS +  + +VSW +MI  Y+Q G + +A  +F  M ++N 
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 468

Query: 437 -------------------------------IKPDSFTMVSVIPALAELSVIRYAKWIHA 465
                                          + PD  T V++    A++   +    I  
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             +++    NV V  A I MY+KCG +  A+ LFD++N + V +WN MI GY  HG+GK 
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A + F+ ML    KP+ I+++  +S CSHSGLV+EG  YF  + + +GI P ++H+  MV
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG L EA D I KMP++P   V+GA+L ACKIH N EL E AA  +FELD  + G
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSG 708

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            ++LLA IY+ A   D  A+VR +M  KG++K PG S +E++N+VH F +    HPQ   
Sbjct: 709 SYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIA 768

Query: 706 IYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           I   ++ L+++I   GYV   +   ++           HSEKLA+AFG+++      IHI
Sbjct: 769 IRNKMDELMEKIAHLGYVRTESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHI 818

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLR+CGDCH   K IS VT RE ++RD  RFH FK+G CSCGDYW
Sbjct: 819 MKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 220/496 (44%), Gaps = 68/496 (13%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV------------------------ 180
           L+ CG  G +   + +HG+L+  G +  +F    ++                        
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70

Query: 181 --------NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                   N YAK G + +A ++FDRMP RD+ SWNT+++G+ Q       L+    MH 
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130

Query: 233 EGRR-GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            G    +  T   ++ +   +G   +   + G   +  F    +V TALVDM+ +CG V+
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190

Query: 292 TA-RLV------------------------------FDGMKSRNVVSWNSMIAAYVEGGN 320
            A RL                               F+ M  R+VVSWN MIAA  + G 
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA+ +  +M  +GV   + T   +L ACA L  L  G  +H  + +     D  + ++
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI +Y+KC     A  +F+ LQ +  VSW  +I G  Q    ++++  F +MR++ +  D
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            F + ++I        +   + +H+L ++S   + + V  +LI +YAKCG +  A  +F 
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M+ER + +W  MI  Y   G    A E F    +G    N IT+   + A    G  E+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFF----DGMATRNAITWNAMLGAYIQHGAEED 486

Query: 561 GIHYFTSLKKDYGIEP 576
           G+  ++++     + P
Sbjct: 487 GLKMYSAMLSQKDVTP 502



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 163/377 (43%), Gaps = 66/377 (17%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL----- 295
            +   L +  + G+L   +A+HG  +  G  S V +   L+  Y  CG +  AR      
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 296 ---------------------------VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                                      +FD M  R+V SWN++++ Y +     + +  F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 329 QKMLDQGVE-PTNVTIMEALHACADLG---------------------DLERGI------ 360
             M   G   P   T    + +C  LG                     D+E  +      
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 361 -----FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
                F  +L  Q++  T +   NS+++ Y+K   +D A + F  +  + +VSWN MI  
Sbjct: 186 CGYVDFASRLFSQIERPT-IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            +Q+GRV EAL    +M  K ++ DS T  S + A A L  + + K +HA VIRS  + +
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            +V +ALI++YAKCG+   A+ +F+ + +R+  +W V+I G   +     +VELFN+M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 536 GPTKPNDITFLCAISAC 552
                +       IS C
Sbjct: 365 ELMAIDQFALATLISGC 381



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 48/337 (14%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++ A  +C  L D  R      LL       +V   N +++ Y+K   +  A ++F ++
Sbjct: 44  TLLHAYLSCGALSDARR------LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYA 460
             + + SWN ++ GY Q  R  + L  F  M RS +  P++FT   V+ +   L     A
Sbjct: 98  PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM------------------- 501
             +  L  +  F  +  V TAL+DM+ +CG V  A  LF                     
Sbjct: 158 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217

Query: 502 ------------MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
                       M ER V +WN+MI      G  + A+ L  +M     + +  T+  ++
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEA---WDFIQ-K 603
           +AC+    +  G      + +     P +D Y   A+++L  + G   EA   ++ +Q +
Sbjct: 278 TACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
             +   + + G++   C   K+VEL  +    L  +D
Sbjct: 335 NSVSWTVLIGGSLQYEC-FSKSVELFNQMRAELMAID 370


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/777 (34%), Positives = 434/777 (55%), Gaps = 10/777 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++VC  L+ L   R+I   II  GL    +    LV ++    S  D   VF  +    
Sbjct: 165 IVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSS 224

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L+ TM+ G ++    ++ +    +M  + V      Y  +++VC ++  ++ G+ I  
Sbjct: 225 VLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDA 284

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++ + F       T ++++Y +CG ++ A  + + M +RD+V+WN +V   AQNG    
Sbjct: 285 RILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWE 344

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVSTALV 281
           A+ L+ RM  EG   + +T +S+L A AN+ +L  G+ +H   +  G     V V  +++
Sbjct: 345 AIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVI 404

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY KCG+ E A  VF+ M  ++ VSWN++I A V     ++A+ +F  M  +G+     
Sbjct: 405 TMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEF 464

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSK 400
           T++  L AC  L DL+    +H        G +  ++ NS+++MY++C  +  A   F  
Sbjct: 465 TLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDS 524

Query: 401 LQGKTLVSWNAMILGYAQ--NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           L+ K LV+W+ ++  YAQ  +G    A  +F +M ++ IKP   T VS + A A ++ + 
Sbjct: 525 LEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLE 584

Query: 459 YAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           + + +H     S F E ++ +   +I+MY KCG+   A+ +FD M E+ + +WN +I  Y
Sbjct: 585 HGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAY 644

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G    A+    +ML     P+  T +  +   SH+GL+E G+ +F S  +D+G+EP 
Sbjct: 645 AHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPS 704

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV-FGAMLGACKIHKNVELGEKAANRL 636
                 +VDLL R G L+ A + I   P     T+ +  +L ACK + + + G + A R+
Sbjct: 705 SGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERV 764

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           FEL+P   G  V+LAN+YA+   W   +++R +ME+  ++K PGCS +EL   VH F SG
Sbjct: 765 FELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISG 824

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLL 755
            +KHP+ + I   LE L   ++ AGYVPDT N +HDVE+  +E +LS HSE+LAI FGL+
Sbjct: 825 ESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLM 884

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++ PG TI + KNLRVC DCH ATK IS V GREI+VRD  RFH FK+G CSCGD+W
Sbjct: 885 STRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/644 (26%), Positives = 323/644 (50%), Gaps = 8/644 (1%)

Query: 45  LLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           + L+ C +  EL   R+I   ++ SGL    +    LV+++ K   +  A +VF+ +  +
Sbjct: 63  IALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLR 122

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  ML  YA+      A+  L RM  + V P    +  ++ VC  +  +  G++IH
Sbjct: 123 DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIH 182

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            ++I  G   D      +V+MY  CG  ++   +F RM +  ++ W T++AG +QNG  E
Sbjct: 183 HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYE 242

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             L +  +M  EG + + +T +S++    N+ +++ G+ +    + + F S   ++T+L+
Sbjct: 243 EGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLI 302

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            +Y +CG ++ A+ + + M  R+VV+WN+M+ A  + G+  EA+ + ++M  +G     V
Sbjct: 303 SLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKV 362

Query: 342 TIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L ACA+L  L +G  +H ++L    L  +V++ NS+I+MY KC + + A  +F  
Sbjct: 363 TYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEA 422

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K  VSWNA+I     N +  +AL  F  M  + ++ + FT++S++ A   L  ++ A
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLA 482

Query: 461 KWIHALVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
           + IHA      F  N   V  ++++MYA+CG++  A+  FD + E+ +  W++++  Y  
Sbjct: 483 RQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQ 542

Query: 520 H--GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
              G G+ A + F +M     KP ++TF+ A+ AC+    +E G            +E  
Sbjct: 543 SKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETS 602

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           +     ++++ G+ G  ++A     +MP +  I+    ++        +E        L 
Sbjct: 603 LVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLL 662

Query: 638 E-LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           +  DPD G    +L  +  A  +   +   R+ ++  GL+ + G
Sbjct: 663 QGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 246/474 (51%), Gaps = 3/474 (0%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K   ++DA  VF+ I  K    +  M+  Y++     +A+    RM+++   P    
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +   L  C   GE+  G++IH  ++ +G + ++     +VNMY KC  +  A K+FD M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD+VSW  ++A +AQNG    AL+ ++RM  EG + + +T V+I+   A +  L +G+ 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +  G +    +  ALV MY  CG  +  + VF  M   +V+ W +MIA   + G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EE + +F+KM  +GV+   VT M  +  C +L  ++ G  +   + +    +   +  S
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LIS+Y +C  +DRA  +   +  + +V+WNAM+   AQNG   EA++   +M  +    +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIR-SCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T +SV+ A A L  +   + IHA V+     ++ V V  ++I MY KCG    A ++F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISAC 552
           + M  +   +WN +I+    +   + A+ELF+ M LEG  + N+ T L  + AC
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG-LRSNEFTLLSLLEAC 473



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 230/452 (50%), Gaps = 7/452 (1%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY KC ++ +A  +FD +  +++ SW  ++A ++QNG    AL+L TRM  EG R D + 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
            V  L A A  G L  G+ +H   + +G  S + +S +LV+MY KC  V  A  VFDGM 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            R+VVSW +M+A Y + G   +A+    +M  +GV+P  VT +  +  CA L  L+ G  
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H  +    L  D  + N+L+ MY  C   D    +FS++   +++ W  MI G +QNG+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             E L  F KM  + +K +  T +S++     L  ++  + I A ++ S F  +  + T+
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           LI +Y +CG +  A+ L + M +R V  WN M+     +G    A+ L  +M       N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 542 DITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
            +T+L  + AC++   + +G  IH    L      E  + +  +++ + G+ G+   A  
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGN--SVITMYGKCGQTEAAMS 418

Query: 600 FIQKMPIEPGIT---VFGAMLGACKIHKNVEL 628
             + MP +  ++   V  A +G  K    +EL
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALEL 450


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/706 (37%), Positives = 403/706 (57%), Gaps = 67/706 (9%)

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F+   +++ +AK G ++ A ++FD +P+ D VSW T++ G+   G  + A+    RM   
Sbjct: 80  FSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSS 139

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G      T  ++L + A   +L +GK VH + ++ G   +V V+ +L++MYAKCG    A
Sbjct: 140 GISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMA 199

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD---------------QG--- 335
           ++VFD M+ ++  +WN+MI+ +++    + A+ +F +M D               QG   
Sbjct: 200 KVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDI 259

Query: 336 --------------VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
                         ++P   T+   L ACA+   L+ G  +H  + +  +    ++ N+L
Sbjct: 260 RALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNAL 319

Query: 382 ISMYSKCKKV---------------------------------DRAADIFSKLQGKTLVS 408
           ISMY+K   V                                 D A  IF  L+ + +V+
Sbjct: 320 ISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVA 379

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI+GYAQNG +++AL  F  M  +  KP+++T+ +V+  ++ L+ + + K +HA+ I
Sbjct: 380 WTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHGLGKAAV 527
           R     +V V  ALI MY++ G++  AR +F+ + + R   TW  MI     HGLG  A+
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ELF KML    KP+ IT++  +SAC+H GLVE+G  YF  +K  + IEP   HY  M+DL
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDL 559

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG L EA++FI+ MPIEP +  +G++L +C++HK V+L + AA +L  +DP+  G +
Sbjct: 560 LGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAY 619

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           + LAN  +A   W+  AKVR  M+ K ++K  G S V++KN+VH F      HPQ   IY
Sbjct: 620 LALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             +  +  EIK  G++PDTNS+ HD+E  V+E +L  HSEKLAIAF L+N+   +T+ I 
Sbjct: 680 CMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIM 739

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC DCH+A +YISL+  REIIVRD  RFH FK+G CSC DYW
Sbjct: 740 KNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 237/522 (45%), Gaps = 71/522 (13%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S   K  +L  A RVF+ IP      + TM+ GY        AV   +RM    ++P 
Sbjct: 85  ILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPT 144

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG---------- 187
            + +T +L  C     +  GK++H  ++  G S  +     ++NMYAKCG          
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204

Query: 188 ---------------------QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
                                Q + A  +FD+M + D+VSWN+I+ G+   G+   AL+ 
Sbjct: 205 RMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALET 264

Query: 227 VTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            + M +    + D  T+ S+L A AN  SL++GK +H + +RA  D    V  AL+ MYA
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324

Query: 286 KCGRVET---------------------------------ARLVFDGMKSRNVVSWNSMI 312
           K G VE                                  AR +FD +K R+VV+W +MI
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             Y + G   +A+ +F+ M+ +G +P N T+   L   + L  L+ G  +H +  +L+  
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           + VS+ N+LI+MYS+   +  A  IF+ +   +  ++W +MIL  AQ+G  NEA+  F K
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M   N+KPD  T V V+ A   + ++   K + + +      E        +ID+  + G
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAG 564

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTH---GLGKAAVE 528
            +  A     +M  E  V  W  ++     H    L K A E
Sbjct: 565 LLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAE 606



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 5/121 (4%)

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
           K  F    ++  +AK G + +AR +FD + +    +W  MI GY   GL K+AV  F +M
Sbjct: 77  KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +     P   TF   +++C+ +  ++ G  +H F       G+ PV +   +++++  + 
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLNMYAKC 193

Query: 592 G 592
           G
Sbjct: 194 G 194


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/661 (39%), Positives = 380/661 (57%), Gaps = 37/661 (5%)

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +++  + +H ++I      +      ++  YA    +  A K+FD +PER+++  N ++ 
Sbjct: 55  DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            +  NGF    + +   M     + D  T   +L A +  G++ IGK +HG A + G  S
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + V   LV MY KCG +  ARLV D M  R+VVSWNS++A Y +    ++A+ + ++M 
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM- 233

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
                       E++    D G +              L   VS T +   MY K     
Sbjct: 234 ------------ESVKISHDAGTM------------ASLLPAVSNTTTENVMYVK----- 264

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
              D+F K+  K+LVSWN MI  Y +N    EA+  +  M +   +PD+ ++ SV+PA  
Sbjct: 265 ---DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACG 321

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
           + S +   K IH  + R     N+ +  ALIDMYAKCG +  AR +F+ M  R V +W  
Sbjct: 322 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTA 381

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI  YG  G G  AV LF+KM +    P+ I F+  ++ACSH+GL+EEG   F  +   Y
Sbjct: 382 MISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 441

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            I P ++H   MVDLLGRAG++ EA+ FIQ+MP+EP   V+GA+LGAC++H N ++G  A
Sbjct: 442 KITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLA 501

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A++LF+L P++ GY+VLL+NIYA A  W+++  +R IM+ KGL+K PG S VE+   +H+
Sbjct: 502 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 561

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIA 751
           F  G   HPQS  IY  L+ L+ ++K  GYVPD+ S +HDVE+  +E  L+ HSEKLAI 
Sbjct: 562 FLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIV 621

Query: 752 FGLLNSS---PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           F L+N+      + I I KNLR+CGDCH A K IS +T REII+RD +RFH F+ GVCSC
Sbjct: 622 FALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681

Query: 809 G 809
            
Sbjct: 682 A 682



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 167/590 (28%), Positives = 270/590 (45%), Gaps = 79/590 (13%)

Query: 8   QLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSG 67
           Q    T+S P   L + K++  + A++  ++        L+    LK LR +   II   
Sbjct: 20  QTRKVTSSVPKLEL-DQKNSPKETAFMLGQV--------LDTYPDLKTLRTVHSRIISED 70

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
           L        KL+  +     ++ A +VF+ IP++   + + M++ Y       + +    
Sbjct: 71  LRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFG 130

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
            M    V P  Y +  +LK C   G I  GK+IHG     G S  LF   G+V+MY KCG
Sbjct: 131 TMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCG 190

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            + EA  + D M  RD+VSWN++VAG+AQN   + AL++   M       D  T+ S+LP
Sbjct: 191 FLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 250

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           AV+N  +                ++++ V     DM+ K G+             +++VS
Sbjct: 251 AVSNTTT----------------ENVMYVK----DMFFKMGK-------------KSLVS 277

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN MI  Y++   P EA+ ++  M   G EP  V+I   L AC D   L  G  +H  ++
Sbjct: 278 WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 337

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           + KL  ++ + N+LI MY+KC  +DRA D+F  ++ + +VSW AMI  Y  +GR  +A+ 
Sbjct: 338 RKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 397

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F KM+   + PDS   V+ + A +   ++           RSCF+    +MT   D Y 
Sbjct: 398 LFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG--------RSCFK----LMT---DHYK 442

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
                 T R         H+     M+D  G  G  K A +   +M   P +PN+  +  
Sbjct: 443 I-----TPRL-------EHLA---CMVDLLGRAGKVKEAYKFIQEM---PMEPNERVWGA 484

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV-DLLGRAGRLNE 596
            + AC      + G+    +  K + + P    Y  ++ ++  +AGR  E
Sbjct: 485 LLGACRVHSNTDIGL---LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/697 (37%), Positives = 414/697 (59%), Gaps = 7/697 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++  +  A RVF  +P++    ++ M+ GY K   L++A+    RM +  + P 
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPD 196

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG + + R G+E+H  ++  GF  ++  +  +V MYAKCG I  A K+FD
Sbjct: 197 VYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +N   E  L+L   M E   + + +TI S+  A   +  +  
Sbjct: 257 GMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF 316

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +HG+A++ GF   V    +L+ MY   GR+  A  +F  M++++ +SW +MI+ Y +
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P +VTI  AL ACA LG L+ GI +H+L         V +
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ MY+K K +D+A ++F  +  K +VSW++MI G+  N R  EAL YF  M   ++
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HV 495

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R       +V  AL+D+Y KCG    A A
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F + +E+ V +WN+M+ G+  HGLG  A+ LFN+M+E    P+++TF+  + ACS +G+
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V +G   F  + + + I P + HY  MVDLL R G+L EA++ I +MPI+P   V+GA+L
Sbjct: 616 VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
             C+IH++VELGE AA  + EL+P++  YHVLL ++Y  A  W ++A+VR  M +KGL++
Sbjct: 676 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQ 737
             GCS VE+K   H+F +    HPQ K I   L  + + +KA G+ P   S+ D E   +
Sbjct: 736 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP-VESLEDKE-VSE 793

Query: 738 ENLLSSHSEKLAIAFGLLNSSPG----STIHIRKNLR 770
           +++L  HSE+LA+AFGL+N++PG    S  ++ KN+ 
Sbjct: 794 DDILCGHSERLAVAFGLINTTPGLCKYSAWYMTKNVE 830



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 173/354 (48%), Gaps = 1/354 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +  A++ M  + G +  A  VF  M  R+V SWN M+  Y + G  EEA+ ++ +ML 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+ P   T    L  C  + D   G  VH  + +   G +V + N+L++MY+KC  +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  +     +SWNAMI G+ +N      L  F  M    ++P+  T+ SV  A   
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS + +AK +H   ++  F  +V    +LI MY   G +G A  +F  M  +   +W  M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G    A+E++  M      P+D+T   A++AC+  G ++ GI     L ++ G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK-LHELAQNKG 429

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               +    A++++  ++  +++A +  + M  +  ++    + G C  H++ E
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 3/354 (0%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K G      F   L+ ++     + DA ++F  +  K    +  M+ GY K    D A+
Sbjct: 325 VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                M   +V+P        L  C  +G +  G ++H      GF   +     ++ MY
Sbjct: 385 EVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AK   I++A ++F  M E+D+VSW++++AGF  N  +  AL     M     + + +T +
Sbjct: 445 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFI 503

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           + L A A  G+LR GK +H Y +R G  S   V  AL+D+Y KCG+   A   F     +
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FV 362
           +VVSWN M++ +V  G  + A+ +F +M++ G  P  VT +  L AC+  G + +G    
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILG 415
           H + ++  +  ++     ++ + S+  K+  A ++ +++  K   + W A++ G
Sbjct: 624 HMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/708 (37%), Positives = 393/708 (55%), Gaps = 67/708 (9%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F    ++++YAK G++ +A  +F  MPERD VSW  +V G  + G    A+ +   M 
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            +G      T+ ++L + A   +  +G+ VH + ++ G  S V V+ ++++MY KCG  E
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214

Query: 292 TARLVFDGMKSRNV-------------------------------VSWNSMIAAYVEGGN 320
           TAR VF+ M  R+V                               VSWN++IA Y + G 
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274

Query: 321 PEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             +A+  F +ML    + P   TI   L ACA+LG +  G  VH  + + ++     +TN
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334

Query: 380 SLISMYSKCKKVDRAA---------------------------------DIFSKLQGKTL 406
           +LISMY+K   V+ A                                  ++F  +  + +
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           V+W AMI+GY QNG  +EA+  F  M     +P+S+T+ +V+   A L+ + Y K IH  
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKA 525
            IRS  E++  V  +++ MYA+ G++  AR +FD ++ R  T TW  MI     HGLG+ 
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           AV LF +ML    KP+ ITF+  +SAC+H G V+EG  YF  L+  +GI P M HY  MV
Sbjct: 515 AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMV 574

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLL RAG  +EA +FIQ+MP+EP    +G++L AC++HKN +L E AA +L  +DP   G
Sbjct: 575 DLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSG 634

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +  L+N+Y+A   W+  AK+    + K ++K  G S   + N VH F +    HPQ   
Sbjct: 635 AYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDT 694

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           +Y     + D+IK AG+VPD  S+ HDV+D ++E +LS HSEKLAIAFGL+++   +T+ 
Sbjct: 695 VYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLR 754

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLRVC DCH A K+IS V  REII+RD  RFH FK+G CSC DYW
Sbjct: 755 IMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 207/496 (41%), Gaps = 119/496 (23%)

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV-----ETARLVFDGMKS-- 302
           AN G+   G+A+H  A++AG  +   +   L+  YA            AR +FD + +  
Sbjct: 37  ANPGA---GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQ 93

Query: 303 RNVVSWNSMIAAYVEGGN-----------PE--------------------EAMRIFQKM 331
           RNV +WNS+++ Y + G            PE                    EA+++F  M
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC--- 388
           +  G+ PT  T+   L +CA       G  VH  + +L L + V + NS+++MY KC   
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213

Query: 389 ----------------------------KKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
                                        ++D A  +F  +  +T+VSWNA+I GY QNG
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 421 RVNEALNYFCKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              +AL +F +M S   + PD FT+ SV+ A A L ++   K +HA ++RS       V 
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 480 TALIDMYAKCGAVGTARA---------------------------------LFDMMNERH 506
            ALI MYAK G+V  AR                                  +FD+M+ R 
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH- 563
           V  W  MI GY  +G    A+ELF  M+    +PN  T    +S C+    +E G  IH 
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453

Query: 564 -YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
               SL+     E       ++V +  R+G L  A     ++        + +M+ A   
Sbjct: 454 KAIRSLQ-----EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQ 508

Query: 623 HKNVELGEKAANRLFE 638
           H    LGE A   LFE
Sbjct: 509 HG---LGEDAVG-LFE 520



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 45/313 (14%)

Query: 364 KLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           +L D++     +V   NSL+S+Y+K  ++  A  +F+++  +  VSW  M++G  + GR 
Sbjct: 84  RLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRF 143

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EA+  F  M +  + P  FT+ +V+ + A        + +H+ V++      V V  ++
Sbjct: 144 GEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSV 203

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVM----------------------------- 513
           ++MY KCG   TARA+F+ M ER V++WN M                             
Sbjct: 204 LNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWN 263

Query: 514 --IDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACSHSGLVEEG--IHYFTSL 568
             I GY  +GL   A+  F++ML   T  P++ T    +SAC++ G+V  G  +H +   
Sbjct: 264 AVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILR 323

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLGACKIHKNVE 627
            +   I  V +   A++ +  ++G +  A   +Q+  + +  +  F A+L        V+
Sbjct: 324 SRMPYIGQVTN---ALISMYAKSGSVENARGVMQQAVMADLNVISFTALL-----EGYVK 375

Query: 628 LGE-KAANRLFEL 639
           LG+ K A  +F++
Sbjct: 376 LGDMKHAREMFDV 388



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 9/287 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+  + K   +  A  +F+ + ++    +  M+ GY +    D+A+     M      
Sbjct: 367 TALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPE 426

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y    +L VC  +  +  GK+IH + I +           +V MYA+ G +  A ++
Sbjct: 427 PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRV 486

Query: 196 FDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           FDR+  R + V+W +++   AQ+G  E A+ L   M   G + D IT V +L A  +VG 
Sbjct: 487 FDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGF 546

Query: 255 LRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMI 312
           +  GK        + G    ++    +VD+ A+ G    A+     M    + ++W S++
Sbjct: 547 VDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLL 606

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL----HACADLGD 355
           +A     N + A    +K+L   ++P N     AL     AC    D
Sbjct: 607 SACRVHKNADLAELAAEKLL--SIDPGNSGAYSALSNVYSACGRWND 651


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/806 (34%), Positives = 432/806 (53%), Gaps = 78/806 (9%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD---AARVFEPIPDKL 102
           LL+ C   +  +++L   I +GL       ++L++      +L     + R+F  + +  
Sbjct: 9   LLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPN 68

Query: 103 DALYHTMLKGYAKFA-SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++T+++ +     S   A+            P  Y Y  LL+ C        G+++H
Sbjct: 69  TFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLH 128

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              + +GF  D++    ++N+YA CG +  A ++F+  P  DLVSWNT++AG+ Q G  E
Sbjct: 129 AHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVE 188

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A  +   M E        TI S                                  +++
Sbjct: 189 EAERVFEGMPERN------TIAS---------------------------------NSMI 209

Query: 282 DMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            ++ + G VE AR +F+G++   R++VSW++M++ Y +    EEA+ +F +M   GV   
Sbjct: 210 ALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVD 269

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF- 398
            V ++ AL AC+ + ++E G +VH L  ++ +   VS+ N+LI +YS C ++  A  IF 
Sbjct: 270 EVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFD 329

Query: 399 ------------SKLQG-------------------KTLVSWNAMILGYAQNGRVNEALN 427
                       S + G                   K +VSW+AMI GYAQ+   +EAL 
Sbjct: 330 DGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALA 389

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F +M+   ++PD   +VS I A   L+ +   KWIHA + R+  + NV + T LIDMY 
Sbjct: 390 LFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYM 449

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG V  A  +F  M E+ V+TWN +I G   +G  + ++ +F  M +  T PN+ITF+ 
Sbjct: 450 KCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMG 509

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            + AC H GLV +G HYF S+  ++ IE  + HYG MVDLLGRAG L EA + I  MP+ 
Sbjct: 510 VLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMA 569

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P +  +GA+LGAC+ H++ E+GE+   +L +L PD  G+HVLL+NIYA+   W  + ++R
Sbjct: 570 PDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIR 629

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
            IM + G+ KTPGCS++E    VH F +G   HPQ   I   L+ +  ++K  GYVP T+
Sbjct: 630 GIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTS 689

Query: 728 SIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            +  D+++  +E  L  HSEKLA+AFGL+  SP + I + KNLR+C DCH   K IS   
Sbjct: 690 EVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAF 749

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            R+I+VRD HRFH FK+G CSC D+W
Sbjct: 750 DRDIVVRDRHRFHHFKHGACSCMDFW 775


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/662 (38%), Positives = 384/662 (58%), Gaps = 36/662 (5%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G    A ++FD +P+ D  + +T+++ F   G    A+ L   +   G +      +++ 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A    G     K VH  A+R G  S   +  AL+  Y KC  VE AR VFD +  ++VV
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SW SM + YV  G P   + +F +M   GV+P +VT+   L AC++L DL+ G  +H   
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +  +  +V + ++L+S+Y++C  V +A  +F  +  + +VSWN ++  Y  N   ++ L
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 427 NYFCKMRSKNI-----------------------------------KPDSFTMVSVIPAL 451
             F +M SK +                                   KP+  T+ S +PA 
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           + L  +R  K +H  V R     ++  MTAL+ MYAKCG +  +R +FDM+  + V  WN
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI     HG G+  + LF  ML+   KPN +TF   +S CSHS LVEEG+  F S+ +D
Sbjct: 440 TMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           + +EP  +HY  MVD+  RAGRL+EA++FIQ+MP+EP  + +GA+LGAC+++KNVEL + 
Sbjct: 500 HLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKI 559

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           +AN+LFE++P+  G +V L NI   A +W + ++ R +M+++G+ KTPGCS +++ + VH
Sbjct: 560 SANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVH 619

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
           +F  G   + +S +IY FL+ L +++K+AGY PDT+ +  D++   +   L SHSEKLA+
Sbjct: 620 TFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAV 679

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFG+LN +  S+I + KNLR+CGDCHNA KY+S V G  IIVRD  RFH F+NG CSC D
Sbjct: 680 AFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQD 739

Query: 811 YW 812
            W
Sbjct: 740 LW 741



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 228/494 (46%), Gaps = 38/494 (7%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+ IP        T++  +      ++A+     +R   + P    +  + K CG 
Sbjct: 85  AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
            G+  R KE+H   I  G   D F    +++ Y KC  +E A ++FD +  +D+VSW ++
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSM 204

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
            + +   G   L L +   M   G + + +T+ SILPA + +  L+ G+A+HG+A+R G 
Sbjct: 205 SSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM 264

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY--------------- 315
              V V +ALV +YA+C  V+ ARLVFD M  R+VVSWN ++ AY               
Sbjct: 265 IENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQ 324

Query: 316 --------------------VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
                               +E G  E+A+ + +KM + G +P  +TI   L AC+ L  
Sbjct: 325 MSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILES 384

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L  G  VH  + +  L  D++   +L+ MY+KC  ++ + ++F  +  K +V+WN MI+ 
Sbjct: 385 LRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIA 444

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEK 474
            A +G   E L  F  M    IKP+S T   V+   +   ++     I   + R    E 
Sbjct: 445 NAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEP 504

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
           +      ++D++++ G +  A      M  E   + W  ++     +   + A    NK+
Sbjct: 505 DANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKL 564

Query: 534 LE-GPTKPNDITFL 546
            E  P  P +   L
Sbjct: 565 FEIEPNNPGNYVSL 578



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 185/387 (47%), Gaps = 37/387 (9%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I+ G+         L+  + K   +  A RVF+ +  K    + +M   Y         +
Sbjct: 159 IRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGL 218

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           +    M ++ V P     + +L  C ++ +++ G+ IHG  + +G   ++F  + +V++Y
Sbjct: 219 AVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLY 278

Query: 184 AKCGQIEEAYKMFDRMPERDLVS-----------------------------------WN 208
           A+C  +++A  +FD MP RD+VS                                   WN
Sbjct: 279 ARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWN 338

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++ G  +NG  E A++++ +M   G + + ITI S LPA + + SLR+GK VH Y  R 
Sbjct: 339 AVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRH 398

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                +   TALV MYAKCG +  +R VFD +  ++VV+WN+MI A    GN  E + +F
Sbjct: 399 WLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLF 458

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL-GTDVSMTNSLISMYSK 387
           + ML  G++P +VT    L  C+    +E G+ +   + +  L   D +    ++ ++S+
Sbjct: 459 ESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSR 518

Query: 388 CKKVDRAADIFSKLQGK-TLVSWNAMI 413
             ++  A +   ++  + T  +W A++
Sbjct: 519 AGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 142/338 (42%), Gaps = 48/338 (14%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+ LK+L   R I    ++ G+ +     + LVSL+ +  S+  A  VF+ +P + 
Sbjct: 239 ILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRD 298

Query: 103 DALYHTML----------KGYAKFASL-------------------------DDAVSFLI 127
              ++ +L          KG A F+ +                         + AV  L 
Sbjct: 299 VVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLR 358

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
           +M+     P     +  L  C  +  +R GKE+H  +  +    DL  MT +V MYAKCG
Sbjct: 359 KMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCG 418

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            +  +  +FD +  +D+V+WNT++   A +G     L L   M + G + + +T   +L 
Sbjct: 419 DLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIV----NVSTALVDMYAKCGRVETARLVFDGMKSR 303
             ++   +  G  +       G D +V    N    +VD++++ GR+  A      M   
Sbjct: 479 GCSHSRLVEEGLQIFN---SMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME 535

Query: 304 NVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
              S W +++ A     N E A     K+ +  +EP N
Sbjct: 536 PTASAWGALLGACRVYKNVELAKISANKLFE--IEPNN 571


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/753 (34%), Positives = 424/753 (56%), Gaps = 8/753 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           IK G  D     T LV  + K ++  D  +VF+ + ++    + T++ GYA+ +  D+ +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           +  +RM+ +   P  + +   L V  + G   RG ++H  ++ NG    +     ++N+Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            KCG + +A  +FD+   + +V+WN++++G+A NG    AL +   M     R    +  
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS- 302
           S++   AN+  LR  + +H   ++ GF    N+ TAL+  Y+KC  +  A  +F  +   
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            NVVSW +MI+ +++    EEA+ +F +M  +GV P   T    L A   +   E    V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----V 415

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + +       ++  +L+  Y K  KV+ AA +FS +  K +V+W+AM+ GYAQ G  
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTA 481
             A+  F ++    IKP+ FT  S++   A  +  +   K  H   I+S  + ++ V +A
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+ MYAK G + +A  +F    E+ + +WN MI GY  HG    A+++F +M +   K +
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            +TF+   +AC+H+GLVEEG  YF  + +D  I P  +H   MVDL  RAG+L +A   I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
           + MP   G T++  +L AC++HK  ELG  AA ++  + P++   +VLL+N+YA +  W 
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
           + AKVR +M ++ ++K PG S +E+KN+ +SF +G   HP   +IY  LE L   +K  G
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           Y PDT+ +  D++D  +E +L+ HSE+LAIAFGL+ +  GS + I KNLRVCGDCH   K
Sbjct: 776 YEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIK 835

Query: 781 YISLVTGREIIVRDMHRFHCF-KNGVCSCGDYW 812
            I+ +  REI+VRD +RFH F  +GVCSCGD+W
Sbjct: 836 LIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 255/496 (51%), Gaps = 24/496 (4%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           ++  +++K+GL         L++L+ K  ++  A  +F+    K    +++M+ GYA   
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
              +A+     MR + V     ++  ++K+C ++ E+R  +++H  ++  GF  D    T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334

Query: 178 GVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            ++  Y+KC  + +A ++F  +    ++VSW  +++GF QN   E A+DL + M  +G R
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T   IL A+  +        VH   ++  ++    V TAL+D Y K G+VE A  V
Sbjct: 395 PNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL-GD 355
           F G+  +++V+W++M+A Y + G  E A+++F ++   G++P   T    L+ CA     
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           + +G   H    + +L + + ++++L++MY+K   ++ A ++F + + K LVSWN+MI G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC---- 471
           YAQ+G+  +AL+ F +M+ + +K D  T + V  A     ++   +    +++R C    
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630

Query: 472 -FEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTHG---LGKAA 526
             E N    + ++D+Y++ G +  A + + +M N    T W  ++     H    LG+ A
Sbjct: 631 TKEHN----SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686

Query: 527 VELFNKMLEGPTKPND 542
            E    M     KP D
Sbjct: 687 AEKIIAM-----KPED 697



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 197/361 (54%), Gaps = 1/361 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A+ +FD+ P RD  S+ +++ GF+++G  + A  L   +H  G   D     S+L   A 
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +     G+ +H   ++ GF   V+V T+LVD Y K    +  R VFD MK RNVV+W ++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I+ Y      +E + +F +M ++G +P + T   AL   A+ G   RG+ VH ++ +  L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
              + ++NSLI++Y KC  V +A  +F K + K++V+WN+MI GYA NG   EAL  F  
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           MR   ++    +  SVI   A L  +R+ + +H  V++  F  +  + TAL+  Y+KC A
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345

Query: 492 VGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           +  A  LF  +    +V +W  MI G+  +   + AV+LF++M     +PN+ T+   ++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 551 A 551
           A
Sbjct: 406 A 406



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 194/371 (52%), Gaps = 10/371 (2%)

Query: 37  RIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+     A ++++C +LKELR    L   ++K G       +T L+  + K  ++ DA R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351

Query: 94  VFEPIPDKLDALYHT-MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           +F+ I    + +  T M+ G+ +    ++AV     M+   V P  + Y+ +L     + 
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
                 E+H Q++   +       T +++ Y K G++EEA K+F  + ++D+V+W+ ++A
Sbjct: 412 P----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV-GSLRIGKAVHGYAMRAGFD 271
           G+AQ G  E A+ +   + + G + +  T  SIL   A    S+  GK  HG+A+++  D
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S + VS+AL+ MYAK G +E+A  VF   + +++VSWNSMI+ Y + G   +A+ +F++M
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
             + V+   VT +    AC   G +E G  +   ++   K+       + ++ +YS+  +
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647

Query: 391 VDRAADIFSKL 401
           +++A  +   +
Sbjct: 648 LEKAMKVIENM 658



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 5/272 (1%)

Query: 288 GRVETARL-----VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           G V ++RL     +FD    R+  S+ S++  +   G  +EA R+F  +   G+E     
Sbjct: 36  GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L   A L D   G  +H    +     DVS+  SL+  Y K         +F +++
Sbjct: 96  FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +V+W  +I GYA+N   +E L  F +M+++  +P+SFT  + +  LAE  V      
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H +V+++  +K + V  +LI++Y KCG V  AR LFD    + V TWN MI GY  +GL
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
              A+ +F  M     + ++ +F   I  C++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 1/218 (0%)

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F K  G+   S+ +++ G++++GR  EA   F  +    ++ D     SV+   A 
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L    + + +H   I+  F  +V V T+L+D Y K       R +FD M ER+V TW  +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  + +    + LF +M    T+PN  TF  A+   +  G+   G+   T + K+ G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 224

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           ++  +    ++++L  + G + +A     K  ++  +T
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 262


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/649 (38%), Positives = 380/649 (58%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+  + +   + DA  +F+ +P K   L++ ML GY K    D+A    + MR  +  
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN 245

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  +L VC     I  G ++HG ++ +G  +D      ++ MYAKCG + +A ++
Sbjct: 246 PNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRL 305

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP+ DLV+WN +++G+ QNGF + A  L   M     + D IT  S LP ++   +L
Sbjct: 306 FDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATL 365

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R GK +H Y +R G    V + +AL+D+Y KC  VE AR +FD     ++V   +MI+ Y
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY 425

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V  G    A+ IF+ +L + +   +VT+   L ACA L  L  G  +H  + +   G   
Sbjct: 426 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSC 485

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + ++++ MY+KC ++D A   F  +  K  V WN+MI   +QNG+  EA++ F +M   
Sbjct: 486 YVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 545

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             K D  ++ + + A A L  + Y K IHA ++R  F  ++F  +ALIDMY+KCG +  A
Sbjct: 546 GTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLA 605

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +FD M E++  +WN +I  YG HG  K ++ LF+ ML    +P+ +TFL  ISAC H+
Sbjct: 606 CRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHA 665

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G V+EGIHYF  + ++ GI   M+HY  MVDL GRAGRLNEA+  I  MP  P   V+G 
Sbjct: 666 GQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGT 725

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC++H NVEL E A+  LF+LDP   GY+VLL+N++A A  W+ + K+R++M+++G+
Sbjct: 726 LLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 785

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           QK PGCS +++ N  H F +    HPQS +IY  L+ L  E++  GYVP
Sbjct: 786 QKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 275/544 (50%), Gaps = 17/544 (3%)

Query: 44  ALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L VC S   +    ++  L++ SGL         L++++ K   L DA R+F+ +P 
Sbjct: 252 ACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK 311

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                ++ M+ GY +   +D+A      M    + P    ++  L +  +   +R+GKEI
Sbjct: 312 TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEI 371

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  +I NG SLD+F  + ++++Y KC  +E A K+FD+    D+V    +++G+  NG  
Sbjct: 372 HCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN 431

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL++   + +E  R + +T+ S+LPA A + +L +GK +HG+ ++ G      V +A+
Sbjct: 432 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 491

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKCGR++ A   F G+  ++ V WNSMI +  + G PEEA+ +F++M   G +   
Sbjct: 492 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           V+I  AL ACA+L  L  G  +H  + +    +D+   ++LI MYSKC  +D A  +F  
Sbjct: 552 VSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDT 611

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ K  VSWN++I  Y  +GR+ ++LN F  M    I+PD  T +++I A      +   
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVD-- 669

Query: 461 KWIHALVIRSCFEKNVFVM------TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVM 513
           + IH      C  + + +M        ++D++ + G +  A  + + M        W  +
Sbjct: 670 EGIHYF---RCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTL 726

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           +     HG  + A      + +    P +  +   +S    +    E +    SL K+ G
Sbjct: 727 LGACRLHGNVELAEVASRNLFD--LDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 784

Query: 574 IEPV 577
           ++ V
Sbjct: 785 VQKV 788



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 149/320 (46%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +VSIL    +   L  G+  H   +  G      + T L+ MY  CG    A+ +F  ++
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
                 WN MI  +   G  + A+  + KML  G  P   T    + AC  L  +  G  
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  +  +    DV + +SLI  YS+   +  A  +F ++  K  V WN M+ GY +NG 
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            + A   F +MR     P+S T   V+   A   +I +   +H LV+ S  E +  V   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+ MYAKCG +  AR LFDMM +  + TWN MI GY  +G    A  LF++M+    KP+
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 542 DITFLCAISACSHSGLVEEG 561
            ITF   +   S    + +G
Sbjct: 349 SITFSSFLPLLSEGATLRQG 368


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 293/835 (35%), Positives = 432/835 (51%), Gaps = 93/835 (11%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L + RR+L + I       H     +++ + K   LSDA  +F  +P +  A ++T+
Sbjct: 72  CGALSDARRLLLMDIAHPNVITH---NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTL 128

Query: 110 LKGYAKFASLDDAVS---FLIRMRYDDVAPVVYNYTYLLKVCGDVG-------------- 152
           + GY  F S    VS   FL   R  D  P  +     +K CG +G              
Sbjct: 129 MSGY--FQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQK 186

Query: 153 -EIRRGKEIHGQLIVNGFSLDLFAMTGVVNM----------------------YAKCGQI 189
            + +   E+   L+      D+F   G V++                      Y K   +
Sbjct: 187 FDSQDDSEVAAALV------DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGV 240

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           + A ++FD MPERD+VSWN +V+  +Q+G    ALD+V  M  +G R D  T  S L A 
Sbjct: 241 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 300

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A + SLR GK +H   +R        V++ALV++YAK G  + A+ VF+ +  RN V+W 
Sbjct: 301 ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWT 360

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +I+ +++ G   E++ +F +M  + +      +   +  C    DL  G  +H L  + 
Sbjct: 361 VLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKS 420

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
                V ++NSLISMY+KC  +  A  IF  +  K +VSW +MI  Y+Q G V +A  +F
Sbjct: 421 GQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFF 480

Query: 430 CKMRSKNI--------------------------------KPDSFTMVSVIPALAELSVI 457
             M  KN+                                +PD  T V++    A+L   
Sbjct: 481 DGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGAN 540

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           +    I    ++     +  V  A+I MY+KCG +  AR +FD +N + + +WN MI GY
Sbjct: 541 KLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGY 600

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG+GK A+E+F+ +L+   KP+ I+++  +S CSHSGLV+EG  YF  +K+ + I P 
Sbjct: 601 SQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPG 660

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++H+  MVDLLGRAG L EA D I  MP++P   V+GA+L ACKIH N EL E AA  +F
Sbjct: 661 LEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVF 720

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           ELD  + G ++L+A IYA A   D  A++R +M  KG++K PG S +E+ N+VH F +  
Sbjct: 721 ELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD 780

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
             HPQ   I   L+ L+++I   GYV   ++  ++           HSEKLA+AFGL+  
Sbjct: 781 VSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH----------HSEKLAVAFGLMTL 830

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
                IHI KNLR+CGDCH   K IS VTGRE ++RD  RFH F  G CSCGDYW
Sbjct: 831 PTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 72/498 (14%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV------------------------- 179
           L+ CG  G +   + +HG+L+  G +  +F    +                         
Sbjct: 31  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 90

Query: 180 -------VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                  +N YAK G++ +A ++F RMP RD+ SWNT+++G+ Q+    ++L+    MH 
Sbjct: 91  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGK-AVHGYAMRAGFDSIVN--VSTALVDMYAKCGR 289
            G    +    ++  A+ + G+L     A+   AM   FDS  +  V+ ALVDM+ +CG 
Sbjct: 151 SG--DSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208

Query: 290 VETA-RL------------------------------VFDGMKSRNVVSWNSMIAAYVEG 318
           V+ A RL                              +FD M  R+VVSWN M++A  + 
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G   EA+ +   M  +GV   + T   +L ACA L  L  G  +H  + +     D  + 
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++L+ +Y+K      A  +F+ L  +  V+W  +I G+ Q G   E++  F +MR++ + 
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            D F + ++I        +   + +H+L ++S   + V V  +LI MYAKC  + +A A+
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  MNE+ + +W  MI  Y   G    A E F    +G ++ N IT+   + A    G  
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFF----DGMSEKNVITWNAMLGAYIQHGAE 504

Query: 559 EEGIHYFTSLKKDYGIEP 576
           E+G+  +  +  +  + P
Sbjct: 505 EDGLRMYKVMLSEEYVRP 522


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/728 (37%), Positives = 409/728 (56%), Gaps = 72/728 (9%)

Query: 155 RRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           + G  +H + + +   L   F+   V++ Y+K G ++   + FD++P+RD VSW T++ G
Sbjct: 61  KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ ++  M +EG      T+ ++L +VA    +  GK VH + ++ G    
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180

Query: 274 VNVSTALVDMYAKCGRVETARLVFD-------------------------------GMKS 302
           V+VS +L++MYAKCG    A+ VFD                                M  
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIF 361
           R++V+WNSMI+ + + G    A+ IF KML D  + P   T+   L ACA+L  L  G  
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300

Query: 362 VHKLLDQLKLGTDVS--MTNSLISMYSKCKKVD--------------------------- 392
           +H  +  +  G D+S  + N+LISMYS+C  V+                           
Sbjct: 301 IHSHI--VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358

Query: 393 ------RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
                 +A +IF  L+ + +V+W AMI+GY Q+G   EA+N F  M     +P+S+T+ +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           ++   + L+ + + K IH   ++S    +V V  ALI MYAK G + +A   FD++  ER
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
              +W  MI     HG  + A+ELF  ML    +P+ IT++   SAC+H+GLV +G  YF
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             +K    I P + HY  MVDL GRAG L EA +FI+KMPIEP +  +G++L AC++HKN
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           ++LG+ AA RL  L+P+  G +  LAN+Y+A   W++ AK+R  M+   ++K  G S +E
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSH 744
           +K++VH F      HP+   IY  ++ + DEIK  GYVPDT S+ HD+E+ V+E +L  H
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SEKLAIAFGL+++   +T+ I KNLRVC DCH A K+IS + GREIIVRD  RFH FK+G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778

Query: 805 VCSCGDYW 812
            CSC DYW
Sbjct: 779 FCSCRDYW 786



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 168/668 (25%), Positives = 279/668 (41%), Gaps = 159/668 (23%)

Query: 46  LLEVCTSLKE-----------LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           LLE+CT+L +            + +   +IKSGL         L++++ K      A ++
Sbjct: 12  LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKL 71

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--------------------- 133
           F+ +P +    ++T+L  Y+K   +D    F  ++   D                     
Sbjct: 72  FDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131

Query: 134 ----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                     + P  +  T +L        +  GK++H  ++  G   ++     ++NMY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191

Query: 184 AKC-------------------------------GQIEEAYKMFDRMPERDLVSWNTIVA 212
           AKC                               GQ++ A   F++M ERD+V+WN++++
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251

Query: 213 GFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           GF Q G+   ALD+ ++M  +     D  T+ S+L A AN+  L IGK +H + +  GFD
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311

Query: 272 SIVNVSTALVDMYAKCGRVETARL---------------------------------VFD 298
               V  AL+ MY++CG VETAR                                  +F 
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +K R+VV+W +MI  Y + G+  EA+ +F+ M+  G  P + T+   L   + L  L  
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 431

Query: 359 GIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG 415
           G  +H     +K G    VS++N+LI+MY+K   +  A+  F  ++  +  VSW +MI+ 
Sbjct: 432 GKQIHG--SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            AQ+G   EAL  F  M  + ++PD  T V V  A             HA          
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT-----------HA---------- 528

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELF 530
                         G V   R  FDMM +       ++ +  M+D +G  GL + A E  
Sbjct: 529 --------------GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLG 589
            KM   P +P+ +T+   +SAC     ++ G     + ++   +EP     Y A+ +L  
Sbjct: 575 EKM---PIEPDVVTWGSLLSACRVHKNIDLGK---VAAERLLLLEPENSGAYSALANLYS 628

Query: 590 RAGRLNEA 597
             G+  EA
Sbjct: 629 ACGKWEEA 636



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/303 (18%), Positives = 122/303 (40%), Gaps = 55/303 (18%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDA 122
           +KSG          L++++ K  +++ A+R F+ I  + D + + +M+   A+    ++A
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVN 181
           +     M  + + P    Y  +   C   G + +G++    +  V+     L     +V+
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559

Query: 182 MYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           ++ + G ++EA +  ++MP E D+V+W ++++                R+H+    G   
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA--------------CRVHKNIDLGKVA 605

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
               +L    N G+                       +AL ++Y+ CG+ E A  +   M
Sbjct: 606 AERLLLLEPENSGAY----------------------SALANLYSACGKWEEAAKIRKSM 643

Query: 301 KSRNV-----VSWNSM-----IAAYVEGGNPEE------AMRIFQKMLDQGVEPTNVTIM 344
           K   V      SW  +     +    +G +PE+        +I+ ++   G  P   +++
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703

Query: 345 EAL 347
             L
Sbjct: 704 HDL 706


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/750 (36%), Positives = 434/750 (57%), Gaps = 16/750 (2%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT-MLKGYAKFASLDDAVSFLIRMRY 131
           L    L++++ K   +  A RVF+ +    D +  T M     +  +  +A+  L  M  
Sbjct: 80  LVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLE 139

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRR--GKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQ 188
             + P  +        C   GE+ R  G  + G  I  GF   D+     +++M+A+ G 
Sbjct: 140 SGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGD 198

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           +  A K+F+ + ER +V W  ++  + Q G A  A++L   M E+G   D  T+ S++ A
Sbjct: 199 LVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSA 258

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG---RVETARLVFDGMKSRNV 305
            A  GS  +G+ +H   +R G  S   VS  LVDMY K      +E AR VF  M + NV
Sbjct: 259 CAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNV 318

Query: 306 VSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +SW ++I+ YV+ GG    A+ +  +ML++ +EP ++T    L ACA+L D + G  +H 
Sbjct: 319 MSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHA 378

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            + +  +G    + N+L+SMY++   ++ A   F +L  + L+S ++ I    + GR N 
Sbjct: 379 RVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI---GETGRSNA 435

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           +  +  ++ S ++   +FT  S++ A A + +    + +HAL I++ FE +  +  +L+ 
Sbjct: 436 S--WSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVS 493

Query: 485 MYAKCGAVGTARALFDMMNERH-VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           MY++CG +  A   FD M + H V +W  +I     HG  + A+ LF+ M+    KPND+
Sbjct: 494 MYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDV 553

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           T++  +SACSH GLV+EG  YF S++KD+ + P M+HY  MVDLL R+G + EA +FI +
Sbjct: 554 TYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINE 613

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP +    V+  +LGAC+ ++N+E+GE AA  + +L+P +   +VLL+N+YA   +WD++
Sbjct: 614 MPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEV 673

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A++R++M  + L K  G S + + N +H F +G T HP+++ IY  L  LI EIK  GYV
Sbjct: 674 ARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYV 733

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PDT+ + HD+ D ++E  L  HSEK+A+AFGL+ + P   I I KNLRVC DCH+A KYI
Sbjct: 734 PDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYI 793

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S  TGREII+RD +RFH  K+G CSCG+YW
Sbjct: 794 SKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 238/479 (49%), Gaps = 14/479 (2%)

Query: 157 GKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGF 214
           G+ +H +L+       D      ++ MY+KCG +  A ++FD M   RDLVSW  +    
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR-IGKAVHGYAMRAGF-DS 272
            +NG  + AL L+  M E G R +  T+ +   A       R  G  V G+A++ GF  +
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V+V  AL+DM+A+ G +  AR VF+G+  R VV W  MI  YV+GG   +A+ +F  ML
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC---K 389
           + G EP   T+   + ACA+ G    G  +H L+ +L L +D  ++  L+ MY+K    +
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQ-NGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            ++ A  +F ++    ++SW A+I GY Q  G+ N A+   C+M +++I+P+  T  S++
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A LS     + IHA V+++       V  AL+ MYA+ G +  AR  FD + ER   
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER--- 418

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
             N++         G++     +++       +  TF   +SA +  GL  +G     +L
Sbjct: 419 --NLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKG-QQLHAL 475

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               G E       ++V +  R G L++A     +M  +  +  + +++ A   H + E
Sbjct: 476 SIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 178/352 (50%), Gaps = 15/352 (4%)

Query: 257 IGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAA 314
           +G+A+H   +     D+   V+ +L+ MY+KCG V  AR VFDGM+  R++VSW +M   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER---GIFVHKLLDQLKL 371
               G  +EA+ +  +ML+ G+ P   T+  A HAC   G+L R   G  +   +     
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFW 179

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           GTDVS+  +LI M+++   +  A  +F+ L  +T+V W  MI  Y Q G   +A+  F  
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC-- 489
           M     +PD +TM S++ A AE       + +H+LV+R     +  V   L+DMY K   
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299

Query: 490 -GAVGTARALFDMMNERHVTTWNVMIDGY-GTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
             ++  AR +F  M   +V +W  +I GY    G    AVEL  +ML    +PN +T+  
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359

Query: 548 AISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            + AC++    + G  IH    +K   G   V+ +  A+V +   +G + EA
Sbjct: 360 LLKACANLSDQDSGRQIHARV-MKTSIGNVNVVGN--ALVSMYAESGCMEEA 408



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 3/160 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAK 115
           +++  L IK+G          LVS++ +   L DA R F+ + D  + + + +++   AK
Sbjct: 470 QQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAK 529

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
               + A+S    M    V P    Y  +L  C  VG ++ GKE    +  +   +    
Sbjct: 530 HGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRME 589

Query: 176 MTG-VVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
               +V++ A+ G ++EA +  + MP + D + W T++  
Sbjct: 590 HYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGA 629


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/652 (38%), Positives = 389/652 (59%), Gaps = 7/652 (1%)

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GF  DL     ++ MY KCG++  A  +FDRM +R++VSW  ++ G  QNG    +L L 
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
           ++M   G + +  T  + L A   +  L IG+ +H   ++ GFD +  V  +++DMY+KC
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           GR+  A  +F+ M  RN++SWN+MIA Y   G  E+A+ +FQKM + G      T    L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 348 HACADLGDLERGIFVHKLL--DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            AC+DLG ++ G  +H  L         + ++  +LI +Y KC K+  A  +FS ++ K 
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           ++SW A+ILGYAQ G + E++  F ++R  +I+ D F + S++   A+ ++++  K +HA
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             I+     ++ V  +++DMY KCG +  A  LF  M  R+V +W VMI GYG HGLGK 
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ LF++M    T+P+D+T+L  +  CSHSGLVE+G  YF+ L   +GI+  ++HY  MV
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAGRL EA + +  MP+E  + ++  +L AC++H ++ELG++    L  LD +   
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPV 481

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +V+++NIYA A  W +  ++R +++ K L+K  G S VE+  EVH FY G   HP +++
Sbjct: 482 NYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEK 541

Query: 706 IYTFLETLIDEIKAA-GYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSS---PG 760
           I+  L+ +   +K   GYV     ++HDVE+  + + L  HSEKLAI   L+        
Sbjct: 542 IHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGR 601

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLRVCGDCH   K +S +     +VRD +RFH F++G+CSC DYW
Sbjct: 602 KVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 241/459 (52%), Gaps = 7/459 (1%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +    L+ ++ K   L  A  VF+ +  +    +  ++ G+ +  +  +++    +M   
Sbjct: 8   MLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLS 67

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
            V P  + ++  LK CG +  +  G++IH   +  GF +       +++MY+KCG+I EA
Sbjct: 68  GVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEA 127

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             MF+ MP R+L+SWN ++AG+   GF E AL L  +M E G   D  T  S L A +++
Sbjct: 128 ACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDL 187

Query: 253 GSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           G+++ G  +H + +  GF   VN  V+ AL+D+Y KCG++  AR VF  ++ ++V+SW +
Sbjct: 188 GAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTA 247

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I  Y + GN  E+M +F+++ +  ++     +   +   AD   +++G  +H    ++ 
Sbjct: 248 LILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
            G D+S+ NS++ MY KC  ++ A  +FS++  + ++SW  MI GY ++G   EA+  F 
Sbjct: 308 SGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFD 367

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKC 489
           +M+  + +PD  T ++V+   +   ++   + +   L      +  V     ++D+  + 
Sbjct: 368 EMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRA 427

Query: 490 GAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGK 524
           G +  A+ L D M  E +V  W  ++     HG   LGK
Sbjct: 428 GRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGK 466



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 170/318 (53%), Gaps = 5/318 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L+ C  L  L   R+I  + +K+G    ++    ++ ++ K   +++AA +FE +P +  
Sbjct: 80  LKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL 139

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ M+ GY      + A+    +M+        + +T  LK C D+G I+ G +IH  
Sbjct: 140 ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAF 199

Query: 164 LIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           LI  GF  S++      ++++Y KCG++  A ++F  + E+ ++SW  ++ G+AQ G   
Sbjct: 200 LITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLA 259

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            +++L  ++ E   + D   + S++   A+   ++ GK +H +A++      ++V  +++
Sbjct: 260 ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSIL 319

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KCG +  A  +F  M +RNV+SW  MI  Y + G  +EA+R+F +M     EP +V
Sbjct: 320 DMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDV 379

Query: 342 TIMEALHACADLGDLERG 359
           T +  L  C+  G +E+G
Sbjct: 380 TYLAVLLGCSHSGLVEKG 397


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 293/835 (35%), Positives = 432/835 (51%), Gaps = 93/835 (11%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L + RR+L + I       H     +++ + K   LSDA  +F  +P +  A ++T+
Sbjct: 52  CGALSDARRLLLMDIAHPNVITH---NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTL 108

Query: 110 LKGYAKFASLDDAVS---FLIRMRYDDVAPVVYNYTYLLKVCGDVG-------------- 152
           + GY  F S    VS   FL   R  D  P  +     +K CG +G              
Sbjct: 109 MSGY--FQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQK 166

Query: 153 -EIRRGKEIHGQLIVNGFSLDLFAMTGVVNM----------------------YAKCGQI 189
            + +   E+   L+      D+F   G V++                      Y K   +
Sbjct: 167 FDSQDDSEVAAALV------DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGV 220

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           + A ++FD MPERD+VSWN +V+  +Q+G    ALD+V  M  +G R D  T  S L A 
Sbjct: 221 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 280

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A + SLR GK +H   +R        V++ALV++YAK G  + A+ VF+ +  RN V+W 
Sbjct: 281 ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWT 340

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +I+ +++ G   E++ +F +M  + +      +   +  C    DL  G  +H L  + 
Sbjct: 341 VLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKS 400

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
                V ++NSLISMY+KC  +  A  IF  +  K +VSW +MI  Y+Q G V +A  +F
Sbjct: 401 GQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFF 460

Query: 430 CKMRSKNI--------------------------------KPDSFTMVSVIPALAELSVI 457
             M  KN+                                +PD  T V++    A+L   
Sbjct: 461 DGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGAN 520

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           +    I    ++     +  V  A+I MY+KCG +  AR +FD +N + + +WN MI GY
Sbjct: 521 KLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGY 580

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG+GK A+E+F+ +L+   KP+ I+++  +S CSHSGLV+EG  YF  +K+ + I P 
Sbjct: 581 SQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPG 640

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++H+  MVDLLGRAG L EA D I  MP++P   V+GA+L ACKIH N EL E AA  +F
Sbjct: 641 LEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVF 700

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           ELD  + G ++L+A IYA A   D  A++R +M  KG++K PG S +E+ N+VH F +  
Sbjct: 701 ELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD 760

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
             HPQ   I   L+ L+++I   GYV   ++  ++           HSEKLA+AFGL+  
Sbjct: 761 VSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH----------HSEKLAVAFGLMTL 810

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
                IHI KNLR+CGDCH   K IS VTGRE ++RD  RFH F  G CSCGDYW
Sbjct: 811 PTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 228/498 (45%), Gaps = 72/498 (14%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV------------------------- 179
           L+ CG  G +   + +HG+L+  G +  +F    +                         
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 70

Query: 180 -------VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                  +N YAK G++ +A ++F RMP RD+ SWNT+++G+ Q+    ++L+    MH 
Sbjct: 71  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGK-AVHGYAMRAGFDSIVN--VSTALVDMYAKCGR 289
            G    +    ++  A+ + G+L     A+   AM   FDS  +  V+ ALVDM+ +CG 
Sbjct: 131 SG--DSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188

Query: 290 VETA-RL------------------------------VFDGMKSRNVVSWNSMIAAYVEG 318
           V+ A RL                              +FD M  R+VVSWN M++A  + 
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G   EA+ +   M  +GV   + T   +L ACA L  L  G  +H  + +     D  + 
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++L+ +Y+K      A  +F+ L  +  V+W  +I G+ Q G   E++  F +MR++ + 
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            D F + ++I        +   + +H+L ++S   + V V  +LI MYAKC  + +A A+
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  MNE+ + +W  MI  Y   G    A E F    +G ++ N IT+   + A    G  
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFF----DGMSEKNVITWNAMLGAYIQHGAE 484

Query: 559 EEGIHYFTSLKKDYGIEP 576
           E+G+  +  +  +  + P
Sbjct: 485 EDGLRMYKVMLSEEYVRP 502


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/767 (35%), Positives = 422/767 (55%), Gaps = 81/767 (10%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           + + ++   +   + DA R+F  +P +  + Y+TML GYA    L  A+SF   +     
Sbjct: 110 RNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----P 165

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-----------------------FSL 171
            P  ++Y  LL   G    +   + +  ++ V                         F L
Sbjct: 166 RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDL 225

Query: 172 ----DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
               D  +  G++  Y + G+I+EA ++FD   E D +SWN ++AG+ Q    E A  + 
Sbjct: 226 APEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMF 285

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA-MRAGFDSIVNVSTALVDMYAK 286
            +M +     D ++  +++   A  G +   + +   A +R  F       TA+V  YA+
Sbjct: 286 NKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVF-----TWTAIVSGYAQ 336

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
            G +E A+ VFD M  +N VSWN+M+AAYV+    EEA  +F  M               
Sbjct: 337 NGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM--------------- 381

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
              C                       +V+  N++++ Y++   +D A  IF  +  K  
Sbjct: 382 --PC----------------------RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDA 417

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSW AM+  Y+Q G   E L  F +M       +      V+   A+++ +     +H+ 
Sbjct: 418 VSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSR 477

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +I++ +    FV  AL+ MY KCG++  A + F+ M ER V +WN MI GY  HG GK A
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           +E+F+ M +  TKP+DIT +  ++ACSHSGLVE+GI YF S+ +D+G+    +HY  M+D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           LLGRAGRL+EA + ++ MP EP  T++GA+LGA +IH+N ELG  AA ++FEL+P+  G 
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGM 657

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +VLL+NIYA++  W  + K+R IM ++G++K PG S +E++N+VH+F  G + HP+ + I
Sbjct: 658 YVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDI 717

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           Y FLE L   +K AGYV  T+ + HDVE+  +E++L  HSEKLA+A+G+L   PG  I +
Sbjct: 718 YAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRV 777

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVC DCH A K IS + GR II+RD +RFH F++G CSCGDYW
Sbjct: 778 IKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 52/335 (15%)

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           K   +V   N  I+ + +  +V  A  +F+ +  ++  ++N M+ GYA NGR+ +AL++F
Sbjct: 102 KPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFF 161

Query: 430 CKMRSKNIKPDSFTMVSVIPALA-------------ELSV---IRYAKWI-----HALV- 467
             +     +PDSF+  +++ AL              E+ V   + Y   I     H LV 
Sbjct: 162 RSI----PRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVS 217

Query: 468 -IRSCF----EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
             R  F    EK+      ++  Y + G +  AR LFD   E    +WN ++ GY     
Sbjct: 218 LARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQ 277

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD--H 580
            + A ++FNKM   P + + +++   +S  +  G + E        ++ + + P+ D   
Sbjct: 278 IEEAQKMFNKM---PQR-DVVSWNTMVSGYARRGDMAEA-------RRLFDVAPIRDVFT 326

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           + A+V    + G L EA      MP +  ++ + AM+ A    + +E     A  LF+  
Sbjct: 327 WTAIVSGYAQNGMLEEAKRVFDAMPDKNAVS-WNAMMAAYVQRRMME----EAKELFDAM 381

Query: 641 P--DEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           P  +   ++ +L   YA A M D+   +  +M +K
Sbjct: 382 PCRNVASWNTMLTG-YAQAGMLDEARAIFGMMPQK 415


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/703 (36%), Positives = 410/703 (58%), Gaps = 54/703 (7%)

Query: 160  IHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            +H +LI NG       + G  ++N+YAK   +E+A+KMF+ +P+ D+ SW  +++GFA+ 
Sbjct: 310  LHAKLIKNG----CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARI 365

Query: 218  GFAELALDLVTRMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G +   L L T+M ++G   +  T+  +L + + NV   RIGK +HG+ +R G D    +
Sbjct: 366  GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVL 425

Query: 277  STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ------- 329
            + +++D Y KC     A  +F  M  ++ VSWN M+++Y++ G+ ++++ +F+       
Sbjct: 426  NNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDA 485

Query: 330  ------------------------KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
                                    KM+  G     +T   AL   + L  L  G  +H  
Sbjct: 486  ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQ 545

Query: 366  LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL---------------VSWN 410
            + ++ +  D  + NSLI MY KC ++++A+ IF  L  ++                VSW+
Sbjct: 546  VLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWS 605

Query: 411  AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
            +M+ GY QNGR  +AL  F  M    ++ D FT+ SV+ A A   V+   + +H  + + 
Sbjct: 606  SMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 471  CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
                +VF+ +++IDMY KCG++  A  +F+   +R+V  W  MI G   HG G+ AV LF
Sbjct: 666  GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 531  NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
              M+     PN+++F+  ++ACSH+GL+EEG  YF  +++ YGI P  +H+  MVDL GR
Sbjct: 726  ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGR 785

Query: 591  AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
            AGRLNE  +FI    I    +V+ + L +C++HKN+E+G     +L EL+P + G ++L 
Sbjct: 786  AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845

Query: 651  ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
            ++I A    W++ AK+R++M+++G++K P  S ++LKN+VHSF  G   HPQ  +IY++L
Sbjct: 846  SSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYL 905

Query: 711  ETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
            + LI  +K  GY  D T  + DVE   ++ LL  HSEKLAIA+G+++++PG+ I + KNL
Sbjct: 906  DELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNL 965

Query: 770  RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            RVC DCHN  KY S + GREII+RD+HRFH FK+G CSC DYW
Sbjct: 966  RVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 241/531 (45%), Gaps = 58/531 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++L+ K  +L  A ++FE IP      +  ++ G+A+     D +    +M+   V P 
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386

Query: 138 VYNYTYLLKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +  + +LK C  +V + R GK IHG ++ NG  LD      +++ Y KC     A K+F
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446

Query: 197 DRMPERDLV-------------------------------SWNTIVAGFAQNGFAELALD 225
             M E+D V                               SWNT++ G  +NG   +AL+
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L+ +M   G   + +T    L   +++  L +GK +H   ++ G      V  +L+DMY 
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566

Query: 286 KCGRVETARLVFDGMKSRN---------------VVSWNSMIAAYVEGGNPEEAMRIFQK 330
           KCG +E A ++F  +   +                VSW+SM++ YV+ G  E+A++ F  
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+   VE    T+   + ACA  G LE G  VH  + ++  G DV + +S+I MY KC  
Sbjct: 627 MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGS 686

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A  IF++ + + +V W +MI G A +G+  EA+  F  M ++ I P+  + V V+ A
Sbjct: 687 LNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTA 746

Query: 451 LAELSVI----RYAKWIHALV-IRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNE 504
            +   ++    +Y + +  +  IR   E      T ++D+Y + G +   +    +    
Sbjct: 747 CSHAGLLEEGCKYFRLMREVYGIRPGAEH----FTCMVDLYGRAGRLNEIKEFIHNNAIS 802

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSH 554
           +  + W   +     H   +  + +  K+LE  P          +I A  H
Sbjct: 803 KLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEH 853


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/676 (37%), Positives = 403/676 (59%), Gaps = 8/676 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LLK       +R GK IH QL+V   +    D+  +  ++N+Y+KCGQ + A K+FDRM 
Sbjct: 29  LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIG 258
           +R++VSW+ ++ G+   G     L L   +   +     ++I  + +L   A+ G ++ G
Sbjct: 89  QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTI-VLSCCADSGRVKEG 147

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K  HGY +++G      V  AL+ MY++C  V++A  + D +   +V S+NS+++A VE 
Sbjct: 148 KQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVES 207

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G   EA ++ ++M+D+ V   +VT +  L  CA + DL+ G+ +H  L +  L  DV ++
Sbjct: 208 GCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVS 267

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++LI  Y KC +V  A   F  L+ + +V+W A++  Y QNG   E LN F KM  ++ +
Sbjct: 268 STLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTR 327

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ FT   ++ A A L  + Y   +H  ++ S F+ ++ V  ALI+MY+K G + ++  +
Sbjct: 328 PNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNV 387

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R V TWN MI GY  HGLGK A+ +F  M+     PN +TF+  +SAC H  LV
Sbjct: 388 FSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALV 447

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAML 617
           +EG +YF  + K + +EP ++HY  MV LLGRAG L+EA +F++    ++  +  +  +L
Sbjct: 448 QEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLL 507

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC IH+N  LG++    + ++DP + G + LL+N++A A  WD + K+R +M+++ ++K
Sbjct: 508 NACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKK 567

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S ++++N  H F S  + HP+S +I+  ++ L+  IK  GY PD   + HDVED  
Sbjct: 568 EPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQ 627

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E  LS HSEKLA+A+GL+   P   I I KNLR+C DCH A K IS  T R IIVRD +
Sbjct: 628 KEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDAN 687

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F+ G+C+C D+W
Sbjct: 688 RFHHFREGLCTCNDHW 703



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 12/473 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAP 136
           L++L+ K      A ++F+ +  +    +  ++ GY     + + +     +   D   P
Sbjct: 67  LINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYP 126

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             Y +T +L  C D G ++ GK+ HG L+ +G  L  +    +++MY++C  ++ A ++ 
Sbjct: 127 NEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQIL 186

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +P  D+ S+N+I++   ++G    A  ++ RM +E    D +T VS+L   A +  L+
Sbjct: 187 DTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQ 246

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           +G  +H   ++ G    V VS+ L+D Y KCG V  AR  FDG++ RNVV+W +++ AY+
Sbjct: 247 LGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYL 306

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G+ EE + +F KM  +   P   T    L+ACA L  L  G  +H  +        + 
Sbjct: 307 QNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLI 366

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+LI+MYSK   +D + ++FS +  + +++WNAMI GY+ +G   +AL  F  M S  
Sbjct: 367 VGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAG 426

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTA 495
             P+  T + V+ A   L++++   +    +++    E  +   T ++ +  + G +  A
Sbjct: 427 ECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEA 486

Query: 496 RALFDMMNERH--VTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDI 543
                   +    V  W  +++    H    LGK   E   +M      P+D+
Sbjct: 487 ENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQM-----DPHDV 534



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 188/361 (52%), Gaps = 4/361 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           +KE ++    ++KSGL      +  L+ ++ +   +  A ++ + +P      Y+++L  
Sbjct: 144 VKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA 203

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
             +     +A   L RM  + V      Y  +L +C  + +++ G +IH QL+  G   D
Sbjct: 204 LVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFD 263

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F  + +++ Y KCG++  A K FD + +R++V+W  ++  + QNG  E  L+L T+M  
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           E  R +  T   +L A A++ +L  G  +HG  + +GF + + V  AL++MY+K G +++
Sbjct: 324 EDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDS 383

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           +  VF  M +R+V++WN+MI  Y   G  ++A+ +FQ M+  G  P  VT +  L AC  
Sbjct: 384 SYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVH 443

Query: 353 LGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           L  ++ G  +  +++ +  +   +     ++++  +   +D A +    ++  T V W+ 
Sbjct: 444 LALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENF---MKTTTQVKWDV 500

Query: 412 M 412
           +
Sbjct: 501 V 501



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 194/383 (50%), Gaps = 12/383 (3%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAM---RAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
           +V++L   A   SLR GK +H   +   +   DS +    +L+++Y+KCG+ + AR +FD
Sbjct: 26  VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLE 357
            M  RNVVSW++++  Y+  G   E + +F+ ++      P        L  CAD G ++
Sbjct: 86  RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVK 145

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G   H  L +  L     + N+LI MYS+C  VD A  I   + G  + S+N+++    
Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALV 205

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           ++G   EA     +M  + +  DS T VSV+   A++  ++    IHA ++++    +VF
Sbjct: 206 ESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V + LID Y KCG V  AR  FD + +R+V  W  ++  Y  +G  +  + LF KM    
Sbjct: 266 VSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELED 325

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY---GAMVDLLGRAGRL 594
           T+PN+ TF   ++AC  + LV   + Y   L     +    +H     A++++  ++G +
Sbjct: 326 TRPNEFTFAVLLNAC--ASLV--ALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNI 381

Query: 595 NEAWDFIQKMPIEPGITVFGAML 617
           + +++    M +   +  + AM+
Sbjct: 382 DSSYNVFSNM-MNRDVITWNAMI 403


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/694 (36%), Positives = 397/694 (57%), Gaps = 41/694 (5%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD-RMPERDLVSWNTIVAGFAQN 217
           ++H  +I  G    +     ++  YA       ++ +F    P  ++  WN+I+     N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G    AL L +       + D  T  S++ A A +    + K++H   +  GF S + + 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI-------FQK 330
            AL+DMY +   ++ AR VF+ M  R+VVSWNS+I+ Y   G   EA+ I       F +
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M++Q  +P  +TI   L AC  LGDLE G +VH  +       D + +N LI+MY+KC  
Sbjct: 214 MVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF--------------------- 429
           +  + ++FS ++ K  VSWN+MI  Y QNG++ ++L  F                     
Sbjct: 273 LLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332

Query: 430 ----------CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
                      +MR++ + PD  TM+S++P  + L+  R  K IH  + +   E +V V 
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 392

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             LI+MY+KCG++  +  +F +M  + V TW  +I   G +G GK AV  F +M      
Sbjct: 393 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 452

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ + F+  I ACSHSGLVEEG++YF  +KKDY IEP ++HY  +VDLL R+  L++A D
Sbjct: 453 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 512

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI  MP++P  +++GA+L AC++  + E+ E+ + R+ EL+PD+ GY+VL++NIYAA   
Sbjct: 513 FILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGK 572

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD++  +R  ++ +GL+K PGCS +E++N+V+ F +G+    Q + +   L  L   +  
Sbjct: 573 WDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAK 632

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GY+ +   + HD+++  + ++L  HSE+LAIAFGLLN+ PG+ + + KNLRVC DCH  
Sbjct: 633 EGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 692

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TKYIS +  RE++VRD +RFH FK+G CSCGDYW
Sbjct: 693 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 253/536 (47%), Gaps = 42/536 (7%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE-PIPDKLDALYHTMLKGY 113
           +L ++  LII  GL    +F  KL++ +  +   + +  VF    P     L++++++  
Sbjct: 31  QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRAL 90

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
                  +A+S     +   + P  Y +  ++  C  + +    K IH +++  GF  DL
Sbjct: 91  THNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDL 150

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE- 232
           +    +++MY +   +++A K+F+ MP RD+VSWN++++G+  NG+   AL++  +  + 
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKL 210

Query: 233 -----EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
                   + D +TI SIL A  ++G L  GK VH Y + +G++     S  L++MYAKC
Sbjct: 211 FMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC 270

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ------------------ 329
           G +  ++ VF GMK ++ VSWNSMI  Y++ G   +++++F+                  
Sbjct: 271 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCV 330

Query: 330 -------------KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
                        +M  +GV P   T++  L  C+ L    +G  +H  + +L L +DV 
Sbjct: 331 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 390

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N LI MYSKC  +  +  +F  ++ K +V+W A+I      G   +A+  F +M +  
Sbjct: 391 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 450

Query: 437 IKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           I PD    V++I A +   ++     + H +      E  +     ++D+ ++   +  A
Sbjct: 451 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 510

Query: 496 RA-LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
              +  M  +   + W  ++      G  + A  +  +++E    P+D  +   +S
Sbjct: 511 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPDDTGYYVLVS 564


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/693 (38%), Positives = 392/693 (56%), Gaps = 42/693 (6%)

Query: 124 SFLIRMRYDDVAPVVYNYTYLL-KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           S L ++  D  +P      +LL +V     +IR  + +H ++I+     +      ++  
Sbjct: 26  SSLPKLELDQKSP--QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRA 83

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YA    +  A K+FD +PER+++  N ++  +  NGF    + +   M     R D  T 
Sbjct: 84  YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             +L A +  G++ IG+ +HG A + G  S + V   LV MY KCG +  ARLV D M  
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R+VVSWNS++  Y +    ++A+ + ++M             E++    D G +      
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREM-------------ESVKISHDAGTMA----- 245

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
                   L   VS T +   MY K        D+F K+  K+LVSWN MI  Y +N   
Sbjct: 246 -------SLLPAVSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMP 290

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EA+  + +M +   +PD+ ++ SV+PA  + S +   K IH  + R     N+ +  AL
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMYAKCG +  AR +F+ M  R V +W  MI  YG  G G  AV LF+K+ +    P+ 
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           I F+  ++ACSH+GL+EEG   F  +   Y I P ++H   MVDLLGRAG++ EA+ FIQ
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            M +EP   V+GA+LGAC++H + ++G  AA++LF+L P++ GY+VLL+NIYA A  W++
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  +R IM+ KGL+K PG S VE+   +H+F  G   HPQS  IY  L+ L+ ++K  GY
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590

Query: 723 VPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNS-----SPGSTIHIRKNLRVCGDCH 776
           VPD+ S +HDVE+  +E  L+ HSEKLAI F L+N+        +TI I KNLR+CGDCH
Sbjct: 591 VPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCH 650

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
            A K IS +T REII+RD +RFH F+ GVCSC 
Sbjct: 651 VAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 230/485 (47%), Gaps = 51/485 (10%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L+    ++ LR +   II   L        KL+  +     ++ A +VF+ IP++   +
Sbjct: 48  VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            + M++ Y       + V     M   +V P  Y +  +LK C   G I  G++IHG   
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G S  LF   G+V+MY KCG + EA  + D M  RD+VSWN++V G+AQN   + AL+
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M       D  T+ S+LPAV+N  +                ++++ V     DM+ 
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSNTTT----------------ENVMYVK----DMFF 267

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           K G+             +++VSWN MI  Y++   P EA+ ++ +M   G EP  V+I  
Sbjct: 268 KMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L AC D   L  G  +H  +++ KL  ++ + N+LI MY+KC  +++A D+F  ++ + 
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW AMI  Y  +GR  +A+  F K++   + PDS   V+ + A +   ++        
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG----- 429

Query: 466 LVIRSCFE---------KNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMID 515
              RSCF+           +  +  ++D+  + G V  A R + DM  E +   W  ++ 
Sbjct: 430 ---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486

Query: 516 GYGTH 520
               H
Sbjct: 487 ACRVH 491


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/711 (36%), Positives = 397/711 (55%), Gaps = 38/711 (5%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y   +LL   G  G   R + +   +       +LF    +++  A    + +   +
Sbjct: 39  PPTYLLNHLLTAYGKAGRHARARRVFDAMP----HPNLFTYNALLSTLAHARLLSDMEAL 94

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALD--LVTRMHEEGRRGDFITIVSILPAVANVG 253
           F  M +RD+VS+N ++AGF+  G    A+   L     +   R   IT+ +++ A + +G
Sbjct: 95  FASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALG 154

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK--------------------------- 286
              +GK  H   +R GF +   V + LVDMYAK                           
Sbjct: 155 DRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMIT 214

Query: 287 ----CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
               C  VE AR +F+ M  R+ ++W +M+  + + G   EA+ IF++M  QG+     T
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYT 274

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L AC  L  LE+G  +H  + + +   +V + ++L+ MYSKC+ +  A  +F ++ 
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SW A+I+GY QNG   EA+  F +M+   I PD +T+ SVI + A L+ +     
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ 394

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H L + S     + V  AL+ +Y KCG++  A  LFD M+     +W  ++ GY   G 
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGR 454

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K  ++LF KML    KP+ +TF+  +SACS +G VE+G  YF S++KD+GI P+ DHY 
Sbjct: 455 AKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYT 514

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DL  R+G+L EA +FI++MP+ P    +G +L AC++  ++E+G+ AA  L E+DP 
Sbjct: 515 CMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQ 574

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +VLL +++AA   W+++A++R  M  + ++K PGCS ++ KN+VH F +    HP 
Sbjct: 575 NPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPC 634

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           SK IY  LE L  ++   GY PD +S+ HDV D  + +++S HSEKLAIAFGL+      
Sbjct: 635 SKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEM 694

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCHNATK+IS +TGR+I+VRD  RFH F +GVCSCGD+W
Sbjct: 695 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 241/512 (47%), Gaps = 40/512 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
           L+S       LSD   +F  +  +    Y+ ++ G++   S   AV   + +   D  V 
Sbjct: 78  LLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVR 137

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P     + ++     +G+   GK+ H Q++  GF  + F  + +V+MYAK   + +A + 
Sbjct: 138 PSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRA 197

Query: 196 FDRMPERDLVSWN-------------------------------TIVAGFAQNGFAELAL 224
           FD +  +++V +N                               T+V GF QNG    AL
Sbjct: 198 FDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEAL 257

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           ++  RM  +G   D  T  SIL A   + +L  GK +H Y +R  +D  V V +ALVDMY
Sbjct: 258 EIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMY 317

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KC  ++ A  VF  M  +N++SW ++I  Y + G  EEA+R+F +M   G++P + T+ 
Sbjct: 318 SKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLG 377

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             + +CA+L  LE G   H L     L   ++++N+L+++Y KC  ++ A  +F ++   
Sbjct: 378 SVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH 437

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WI 463
             VSW A++ GYAQ GR  E ++ F KM +K +KPD  T + V+ A +    +   + + 
Sbjct: 438 DQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYF 497

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG- 521
           H++             T +ID+Y++ G +  A      M        W  ++      G 
Sbjct: 498 HSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557

Query: 522 --LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
             +GK A E  N +   P  P     LC++ A
Sbjct: 558 MEIGKWAAE--NLLEIDPQNPASYVLLCSMHA 587



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 180/331 (54%), Gaps = 4/331 (1%)

Query: 73  LFQTKLVSLF-CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           ++ T +  L  CK   + +A R+FE + D+    + TM+ G+ +     +A+    RMR+
Sbjct: 208 MYNTMITGLLRCKM--VEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRF 265

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             +A   Y +  +L  CG +  + +GK+IH  +I   +  ++F  + +V+MY+KC  I+ 
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKL 325

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F RM  ++++SW  ++ G+ QNG +E A+ + + M  +G   D  T+ S++ + AN
Sbjct: 326 AETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCAN 385

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           + SL  G   H  A+ +G    + VS ALV +Y KCG +E A  +FD M   + VSW ++
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 445

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLK 370
           ++ Y + G  +E + +F+KML +GV+P  VT +  L AC+  G +E+G  + H +     
Sbjct: 446 VSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHG 505

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +         +I +YS+  K+  A +   ++
Sbjct: 506 IVPIDDHYTCMIDLYSRSGKLKEAEEFIKQM 536



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 157/325 (48%), Gaps = 10/325 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C +L  L   ++I   II++   D     + LV ++ K  S+  A  VF  +  K 
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GY +    ++AV     M+ D + P  Y    ++  C ++  +  G + H 
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +V+G    +     +V +Y KCG IE+A+++FD M   D VSW  +V+G+AQ G A+ 
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKE 457

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALV 281
            +DL  +M  +G + D +T + +L A +  G +  G++  H      G   I +  T ++
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMI 517

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PT 339
           D+Y++ G+++ A      M    + + W ++++A    G+ E      + +L+   + P 
Sbjct: 518 DLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPA 577

Query: 340 NVTIMEALHACA----DLGDLERGI 360
           +  ++ ++HA      ++  L RG+
Sbjct: 578 SYVLLCSMHAAKGQWNEVAQLRRGM 602


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 387/651 (59%), Gaps = 13/651 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   ++  YAK   I  A+ +FD++P+ DLVS+NT++  +A  G    AL L   M 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 232 EEGRRGDFITIVSILPAVAN-VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           E G   D  T   ++ A  N VG +R    +H  A  +GFDS V+V  +L+  Y+K G +
Sbjct: 133 EMGLVMDGFTFSGVITACCNHVGLIR---QLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 291 ETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           E A +VF+GM  + R+ VSWNSMI AY +     +A+ +++ M+ +G E    T+   L 
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSKLQGKTLV 407
             + + DL  G+  H    +     +  + + LI MY+KC   +  +  +F ++ G  LV
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309

Query: 408 SWNAMILGYAQNGRVN-EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            WN MI GY+QN  ++ EAL  F +M+     PD  + V  I A + LS     K  HAL
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369

Query: 467 VIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            ++S    N + V  AL+ MY+KCG +  AR LF  M + +  T N +I GY  HG+G  
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           ++ LF +ML     P  IT +  +SAC+H+G VEEG  YF  +K  +GIEP  +HY  M+
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMI 489

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG+L+EA   I  MP  PG   + A+LGAC+ + N+EL EKAAN+  +L+P    
Sbjct: 490 DLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAV 549

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +++LA++Y+AA  W++ A++R +M  +G++K PGCS +EL   VH F +    HP+ K 
Sbjct: 550 PYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKE 609

Query: 706 IYTFLETLIDEIKAAGYVPDTN--SIHDVEDYVQEN--LLSSHSEKLAIAFGLLNSSPGS 761
           I+ +L+ +  ++K AGYVPD     + D E   QE   +L+ HSEKLA+AFGLL +  G 
Sbjct: 610 IHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGE 669

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLR+CGDCHNA K++S +  R+I VRD +RFHCF++G CSCGDYW
Sbjct: 670 PLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 273/570 (47%), Gaps = 42/570 (7%)

Query: 26  HTLSQRAYIPSRIYRHPSALLL-EVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFC 83
           HT+  ++ IPS  Y     +LL   C  L            +   + ++F    L++ + 
Sbjct: 31  HTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAF-----NQTHEPNVFSFNALIAAYA 85

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K + +  A  +F+ IP      ++T++  YA       A+S    MR  ++  V+  +T+
Sbjct: 86  KESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR--EMGLVMDGFTF 143

Query: 144 ---LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
              +   C  VG IR   ++H     +GF   +     ++  Y+K G +EEA  +F+ M 
Sbjct: 144 SGVITACCNHVGLIR---QLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMG 200

Query: 201 E--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           E  RD VSWN+++  + Q+     AL L   M   G   D  T+ S+L   + V  L  G
Sbjct: 201 EEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGG 260

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGR-VETARLVFDGMKSRNVVSWNSMIAAYVE 317
              H  A++ GF+   +V + L+DMYAKCG  +  +R VF+ +   ++V WN+MI+ Y +
Sbjct: 261 LQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQ 320

Query: 318 GGNPE---EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
             N E   EA+  F++M   G  P + + + A+ AC++L    +G   H L  + ++ ++
Sbjct: 321 --NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSN 378

Query: 375 -VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            +S+ N+L++MYSKC  +  A  +F ++     V+ N++I GYAQ+G   E+LN F +M 
Sbjct: 379 QISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQML 438

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM-------TALIDMY 486
           + +I P S T+VS++ A A    +   K    ++      K++F +       + +ID+ 
Sbjct: 439 AASIAPTSITLVSILSACAHTGRVEEGKKYFNMM------KDIFGIEPEAEHYSCMIDLL 492

Query: 487 AKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDIT 544
            + G +  A  L D M        W  ++     +G  + A +  N+ L+  PT  N + 
Sbjct: 493 GRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPT--NAVP 550

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
           ++   S  S +   EE       L +D GI
Sbjct: 551 YIMLASMYSAARKWEEAAR-IRKLMRDRGI 579



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 190/411 (46%), Gaps = 41/411 (9%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL +      L  GK++H   +++   S   +S   + +Y+KC  + TA   F+     N
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL-------- 356
           V S+N++IAAY +    E  + +   + DQ  +P  V+    ++A AD GD         
Sbjct: 74  VFSFNALIAAYAK----ESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 357 ---ERGIF----------------------VHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              E G+                       +H L       + VS+ NSL++ YSK   +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 392 DRAADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           + A  +F+ +  + +  VSWN+MI+ Y Q+ R  +AL  +  M  +  + D FT+ SV+ 
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA-VGTARALFDMMNERHVT 508
             + +  +      HA  I++ F KN  V + LIDMYAKCGA +  +R +F+ +    + 
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309

Query: 509 TWNVMIDGYGTHG-LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            WN MI GY  +  L   A+E F +M      P+D +F+CAISACS+     +G  +   
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
             K       +    A+V +  + G L +A    Q+MP    +T+   + G
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG 420



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 37/227 (16%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK------------ 389
           +  + L +C    DL  G  +H +  +  + +   ++N  I +YSKC             
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 390 -------------------KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
                               +  A  +F ++    LVS+N +I  YA  G    AL+ F 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 431 KMRSKNIKPDSFTMVSVIPALA-ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           +MR   +  D FT   VI A    + +IR    +H+L   S F+  V V  +L+  Y+K 
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQ---LHSLAFSSGFDSYVSVKNSLLTYYSKN 186

Query: 490 GAVGTARALFDMMNE--RHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           G +  A  +F+ M E  R   +WN MI  YG H  G  A+ L+  M+
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMV 233



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E NVF   ALI  YAK   +  A  LFD + +  + ++N +I+ Y   G   +A+ LF +
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 533 MLEGPTKPNDITFLCAISA-CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           M E     +  TF   I+A C+H GL+ +      SL    G +  +    +++    + 
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQ----LHSLAFSSGFDSYVSVKNSLLTYYSKN 186

Query: 592 GRLNEAWDFIQKMPIEPGITV-FGAMLGACKIHKN----VELGEKAANRLFELD 640
           G L EA      M  E    V + +M+ A   HK     + L     +R FE+D
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/706 (37%), Positives = 401/706 (56%), Gaps = 40/706 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMP 200
           LL  C  +  +R    IH Q+I  G     +A++ ++    +      +  A  +FD + 
Sbjct: 8   LLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E  L+ WNT+  G A +     AL L   M   G   +  T   +L + A   + + G+ 
Sbjct: 65  EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV------------------------ 296
           +HG  ++ GFD  + + T+L+ MY + GR+E A+ V                        
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 297 -------FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                  FD +  ++VVSWN+ I+ Y E GN +EA+ +F+KM+   V P   T++  L A
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA  G +E G  VH  ++    G ++ + N+LI +YSKC +++ A  +F  L  K ++SW
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N +I GY       EAL  F  M     KP+  TM+S++ A A L  I   +WIH  + +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364

Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                     + T+LIDMYAKCG +  A+ +FD M  R +++WN MI G+  HG   AA 
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ++F++M +   +P+DITF+  +SACSHSG+++ G H F S+ +DY + P ++HYG M+DL
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDL 484

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
            G +G   EA   I  M +EP   ++ ++L ACK+H NVELGE  A  L +++P+  G +
Sbjct: 485 XGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSY 544

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIYA A  W+++AK R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY
Sbjct: 545 VLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC +CH ATK IS +  REII RD  RFH F++G CSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 186/599 (31%), Positives = 306/599 (51%), Gaps = 75/599 (12%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVS---LFCKYNSLSDAARVFEP 97
           HPS  LL  C +L+ LR I   +IK+GL + +   +KL+    L   ++ L  A  VF+ 
Sbjct: 3   HPSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           I +    +++TM +G+A  +    A+   + M    + P  Y + +LLK C      + G
Sbjct: 63  IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ----------------------------- 188
           +++HGQ++  GF LDL+  T +++MY + G+                             
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182

Query: 189 --IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
             IE A+KMFD +P +D+VSWN  ++G+A+ G  + AL+L  +M +   R D  T+V++L
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A  GS+ +G+ VH +    GF   + +  AL+D+Y+KCG +ETA  +F G+ +++V+
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN++I  Y      +EA+ +FQ ML  G +P +VT++  L ACA LG ++ G ++H  +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYI 362

Query: 367 DQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           D+ LK  T+  S+  SLI MY+KC  ++ A  +F  +  ++L SWNAMI G+A +GR N 
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A + F +MR   I+PD  T V ++ A +   ++   + I   + R               
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRD-------------- 468

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
                         + +M +  +  +  MID  G  GL K A ++ N M     +P+ + 
Sbjct: 469 --------------YKLMPK--LEHYGCMIDLXGHSGLFKEAEKMINTM---EMEPDGVI 509

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           +   + AC   G VE G  Y  +L K   IEP  ++ G+ V LL       E W+ + K
Sbjct: 510 WCSLLKACKMHGNVELGESYAQNLIK---IEP--ENPGSYV-LLSNIYATAERWNEVAK 562



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 224/504 (44%), Gaps = 82/504 (16%)

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC------GRVETARLV 296
           +S+L     + SLRI   +H   ++ G     N + AL  +   C        +  A  V
Sbjct: 6   LSLLHXCKTLQSLRI---IHAQMIKTGLH---NTNYALSKLLEXCVLSPHFDGLPYAISV 59

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD ++   ++ WN+M   +    +P  A++++  M+  G+ P + T    L +CA     
Sbjct: 60  FDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAF 119

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI------------------- 397
           + G  +H  + +     D+ +  SLISMY +  +++ A  +                   
Sbjct: 120 KEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGY 179

Query: 398 ------------FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
                       F ++  K +VSWNA I GYA+ G   EAL  F KM   N++PD  TMV
Sbjct: 180 ASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMV 239

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           +V+ A A+   I   + +H+ +    F  N+ ++ ALID+Y+KCG + TA  LF  ++ +
Sbjct: 240 TVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK 299

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH 563
            V +WN +I GY    L K A+ LF  ML    KPND+T L  +SAC+H G ++ G  IH
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359

Query: 564 YF---------------TSLKKDYG---------------IEPVMDHYGAMVDLLGRAGR 593
            +               TSL   Y                +   +  + AM+      GR
Sbjct: 360 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419

Query: 594 LNEAWDFIQKMP---IEPGITVFGAMLGACKIHKNVELGE---KAANRLFELDPDEGGYH 647
            N A+D   +M    IEP    F  +L AC     ++LG    ++  R ++L P    Y 
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYG 479

Query: 648 VLLANIYAAASMWDKLAKVRTIME 671
            ++ ++   + ++ +  K+   ME
Sbjct: 480 CMI-DLXGHSGLFKEAEKMINTME 502


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/783 (33%), Positives = 437/783 (55%), Gaps = 15/783 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLC-----DQHLFQTKLVSLFCKYNSLSDAARVF 95
           A +L  C+ L+ L   +R+  L+++  L      D+ L +  ++ ++ +      A  VF
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT-YLLKVCGDVGEI 154
           + + D+    + +++  +       DA+    +M    V+P    +T  LLK  G    +
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             GK +H  ++  G+  D   M  VV MY KCG +E+A  +FD + + ++ SW  I+A +
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSI 273
           AQNG     L L++RM++ G + D  T  ++L A   VG+L   K +H   + + G D  
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
             V TAL+++Y KCG +E A  VF  + ++++VSW+SMIAA+ + G  + A+++   M  
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +GV P NVT +  L A   L   + G  +H  + Q     DV +T++L+ MY     V+ 
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  IF   + + +VSW++MI GY+QN     AL+ F +M    ++P+S T VS I A A 
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           +  +R    +H  V     +K+V V TAL+++Y KCG +  A A+F  M ++++ TW  +
Sbjct: 434 VGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSI 493

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
              YG +G G  +++L + M     KP+ I F+  + +C+++G + +G+HY+  + +D+G
Sbjct: 494 AMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFG 553

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I P ++H G MVD+LGRAG+L  A   I  M  E  +  +  +L ACK H +     +AA
Sbjct: 554 IAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHNDTARAARAA 612

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            ++F+L+P     +VLL++++ AA  W+   + R  M+ +G+Q+  G S +E+ + VH F
Sbjct: 613 EKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEF 672

Query: 694 YSGSTKHPQS--KRIYTFLETLIDEIKAAGYVPDTNSI--HDVEDYVQENLLSSHSEKLA 749
            + S   P      I+  LE L  E++ AGYVPD  ++   DVE+  +EN +  HSE LA
Sbjct: 673 VAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLA 732

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +  G++++  G+ + I KNLR+C DCH ATK++S +  R I VRD  R H F+NGVCSCG
Sbjct: 733 LGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCG 792

Query: 810 DYW 812
           DYW
Sbjct: 793 DYW 795


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/706 (37%), Positives = 394/706 (55%), Gaps = 67/706 (9%)

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F    +++MYAK G++ +A  +F +MPERD VSW  +V G  + G    A+     M  E
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G       + ++L + A   +  IG+ VH + ++ G  S V V+ +++ MY KCG  ETA
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETA 217

Query: 294 RLVFDGMK-------------------------------SRNVVSWNSMIAAYVEGGNPE 322
           R VF+ MK                                R++VSWN++IA Y + G  +
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDD 277

Query: 323 EAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            A++ F +ML    +EP   T+   L ACA+L  L+ G  +H  + +  +     + N+L
Sbjct: 278 MALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNAL 337

Query: 382 ISMYSKCKKVD---------------------------------RAADIFSKLQGKTLVS 408
           IS Y+K   V+                                 +A ++F  +  + +++
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI+GY QNG+ +EA+  F  M     +P+S T+ +V+ A A L+ + Y K IH   I
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAI 457

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKAAV 527
           RS  E++V V  A+I +YA+ G+V  AR +FD +  R  T TW  MI     HGLG+ A+
Sbjct: 458 RSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAI 517

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF +ML    KP+ +T++   SAC+H+G +++G  Y+  +  ++GI P M HY  MVDL
Sbjct: 518 VLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDL 577

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           L RAG L EA +FIQ+MP+ P   V+G++L AC++ KN +L E AA +L  +DPD  G +
Sbjct: 578 LARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAY 637

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
             LAN+Y+A   W+  A++  + + K ++K  G S   ++++VH F +    HPQ   I 
Sbjct: 638 SALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAIC 697

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
                + +EIK AG+VPD NS+ HDV+D ++E LLS HSEKLAIAFGL+++   +T+ I 
Sbjct: 698 KKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIM 757

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC DCH A K+IS V  REIIVRD  RFH F++G CSC DYW
Sbjct: 758 KNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/593 (26%), Positives = 247/593 (41%), Gaps = 115/593 (19%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S++ K   L+DA  VF  +P++    +  M+ G  +     DAV   + M  + +AP 
Sbjct: 103 LLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPS 162

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +L  C        G+++H  +I  G S  +     V+ MY KCG  E A  +F+
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222

Query: 198 RMP-------------------------------ERDLVSWNTIVAGFAQNGFAELALDL 226
           RM                                ER +VSWN I+AG+ QNG  ++AL  
Sbjct: 223 RMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKF 282

Query: 227 VTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            +RM        D  T+ S+L A AN+  L++GK +H Y +R G      +  AL+  YA
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342

Query: 286 KCGRVETARL---------------------------------VFDGMKSRNVVSWNSMI 312
           K G VETAR                                  VFD M +R+V++W +MI
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             Y + G  +EAM +F+ M+  G EP + T+   L ACA L  L  G  +H    +    
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             VS++N++I++Y++   V  A  +F ++   K  V+W +MI+  AQ+G   +A+  F +
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEE 522

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M    +KPD  T + V  A      I   K                              
Sbjct: 523 MLRVGVKPDRVTYIGVFSACTHAGFIDKGK------------------------------ 552

Query: 492 VGTARALFDMMNERHV----TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
               R    M+NE  +    + +  M+D     GL   A E   +M   P  P+ + +  
Sbjct: 553 ----RYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRM---PVAPDTVVWGS 605

Query: 548 AISAC---SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            ++AC    ++ L E       S+  D         Y A+ ++    GR N+A
Sbjct: 606 LLAACRVRKNADLAELAAEKLLSIDPDNS-----GAYSALANVYSACGRWNDA 653



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 175/398 (43%), Gaps = 102/398 (25%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR----VETARLVFDGM--KSRNVVSWNSM 311
           G+A+H +A++AG      +   L+  YA+ G        AR +FD +    RN  +WNS+
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 312 IAAYVEGGN-----------PE--------------------EAMRIFQKMLDQGVEPTN 340
           ++ Y + G            PE                    +A++ F  M+ +G+ P+ 
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC------------ 388
             +   L +CA       G  VH  + +L L + V + NS++ MY KC            
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223

Query: 389 -------------------KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
                               ++D A  +F  ++ +++VSWNA+I GY QNG  + AL +F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283

Query: 430 CKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
            +M  + +++PD FT+ SV+ A A L +++  K +H+ ++R+    +  +M ALI  YAK
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAK 343

Query: 489 CGAVGTARAL---------------------------------FDMMNERHVTTWNVMID 515
            G+V TAR +                                 FD+MN R V  W  MI 
Sbjct: 344 SGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIV 403

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           GY  +G    A+ELF  M+    +PN  T    +SAC+
Sbjct: 404 GYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACA 441



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 147/319 (46%), Gaps = 43/319 (13%)

Query: 358 RGIF--VHKLLDQLKLGTDVSMT-NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
           RG F    +L D +      + T NSL+SMY+K  ++  A  +F+++  +  VSW  M++
Sbjct: 77  RGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVV 136

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           G  + GR  +A+  F  M  + + P  F + +V+ + A        + +H+ VI+     
Sbjct: 137 GLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSS 196

Query: 475 NVFVMTALIDMYAKCGAVGTARA-------------------------------LFDMMN 503
            V V  +++ MY KCG   TARA                               +F+ M 
Sbjct: 197 CVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENME 256

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACSHSGLVEEGI 562
           ER + +WN +I GY  +GL   A++ F++ML   + +P++ T    +SAC++  +++ G 
Sbjct: 257 ERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGK 316

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLGACK 621
              + + +  G+        A++    ++G +  A   + K  + +  +  F A+L    
Sbjct: 317 QMHSYILRT-GMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALL---- 371

Query: 622 IHKNVELGE-KAANRLFEL 639
               V+LG+ K A  +F++
Sbjct: 372 -EGYVKLGDTKQAREVFDV 389



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 13/315 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           S++  RRI+    K+ + D ++   T L+  + K      A  VF+ + ++    +  M+
Sbjct: 346 SVETARRIMD---KAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY +    D+A+     M      P  +    +L  C  +  +  GK+IH + I +   
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTR 229
             +     ++ +YA+ G +  A ++FD++  R + V+W +++   AQ+G  E A+ L   
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEE 522

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCG 288
           M   G + D +T + +  A  + G +  GK  +   +   G    ++    +VD+ A+ G
Sbjct: 523 MLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAG 582

Query: 289 RVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
            +  A      M  + + V W S++AA     N + A    +K+L   ++P N     AL
Sbjct: 583 LLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLL--SIDPDNSGAYSAL 640

Query: 348 ----HACADLGDLER 358
                AC    D  R
Sbjct: 641 ANVYSACGRWNDAAR 655


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/753 (35%), Positives = 436/753 (57%), Gaps = 2/753 (0%)

Query: 58   RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
            ++L  II+ G  D       L+S+F  ++S+ +A  VF+ + +     ++ M+  YA   
Sbjct: 318  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 377

Query: 118  SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
               +++     MR+          + LL VC  V  ++ G+ IHG ++  G   ++    
Sbjct: 378  LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 437

Query: 178  GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
             ++ +Y++ G+ E+A  +F  M ERDL+SWN+++A + Q+G     L ++  + + G+  
Sbjct: 438  TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 497

Query: 238  DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
            + +T  S L A +N   L   K VH   + AGF   + V  ALV MY K G +  A+ V 
Sbjct: 498  NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL 557

Query: 298  DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL- 356
              M   + V+WN++I  + E   P EA++ ++ + ++G+    +T++  L AC+   DL 
Sbjct: 558  QTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL 617

Query: 357  ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            + G+ +H  +      +D  + NSLI+MY+KC  ++ +  IF  L  K+ ++WNAM+   
Sbjct: 618  KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAAN 677

Query: 417  AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            A +G   EAL  F +MR+  +  D F+    + A A L+V+   + +H LVI+  FE ++
Sbjct: 678  AHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDL 737

Query: 477  FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
             V  A +DMY KCG +     +      R   +WN++I  +  HG  + A E F++ML+ 
Sbjct: 738  HVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKL 797

Query: 537  PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              KP+ +TF+  +SAC+H GLV+EG+ Y+ S+ +++G+ P ++H   ++DLLGR+GRL+ 
Sbjct: 798  GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 857

Query: 597  AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
            A  FI++MP+ P    + ++L AC+IH N+EL  K A  L ELDP +   +VL +N+ A 
Sbjct: 858  AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCAT 917

Query: 657  ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
            +  W+ +  +R  M    ++K P CS V+LK++VHSF  G   HPQ+ RI   L  L+  
Sbjct: 918  SGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKM 977

Query: 717  IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
             K AGYVPDT+ ++HD+++  +E  L +HSE+LA+AFGL+N+   ST+ I KNLRVCGDC
Sbjct: 978  TKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDC 1037

Query: 776  HNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
            H+  K++S + GR+I++RD +RFH F  G CSC
Sbjct: 1038 HSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 300/598 (50%), Gaps = 5/598 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K+G+       T LV  +     + +A ++FE +PD     + +++ GY+   +  +
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
            ++   RMR + V+     +  +   CG + +   G ++ G +I  GF   +     +++
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 340

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           M++    +EEA  +FD M E D++SWN +++ +A +G    +L     M       +  T
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + S+L   ++V +L+ G+ +HG  ++ G DS V +   L+ +Y++ GR E A LVF  M 
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            R+++SWNSM+A YV+ G   + ++I  ++L  G    +VT   AL AC++   L     
Sbjct: 461 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 520

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH L+        + + N+L++MY K   +  A  +   +     V+WNA+I G+A+N  
Sbjct: 521 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 580

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPAL-AELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            NEA+  +  +R K I  +  TMVSV+ A  A   ++++   IHA ++ + FE + +V  
Sbjct: 581 PNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 640

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +LI MYAKCG + ++  +FD +  +   TWN M+     HG G+ A+++F +M       
Sbjct: 641 SLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNL 700

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           +  +F   ++A ++  ++EEG      L    G E  +    A +D+ G+ G +++    
Sbjct: 701 DQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 759

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           + + PI      +  ++ A   H   +   +  + + +L P     HV   ++ +A +
Sbjct: 760 LPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD--HVTFVSLLSACN 814



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/560 (29%), Positives = 277/560 (49%), Gaps = 13/560 (2%)

Query: 112 GYAKFASLD-DAVSFLIRMRYDDVAPVVYN-YTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           G  ++  LD D     ++ ++ D      N   + LK   ++     GK +H   IV   
Sbjct: 66  GSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSV 125

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +L +F    ++NMY+K G IE A  +FD M  R+  SW+T+++G+ + G  E A+ L  +
Sbjct: 126 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 185

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRI-GKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M   G   +   + S++ A +  G +   G  VHG+ ++ G    V V TALV  Y   G
Sbjct: 186 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 245

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            V  A+ +F+ M   NVVSW S++  Y + GNP E + ++Q+M  +GV     T      
Sbjct: 246 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTS 305

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           +C  L D   G  V   + Q      VS+ NSLISM+S    V+ A  +F  +    ++S
Sbjct: 306 SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 365

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WNAMI  YA +G   E+L  F  MR  + + +S T+ S++   + +  +++ + IH LV+
Sbjct: 366 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 425

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +   + NV +   L+ +Y++ G    A  +F  M ER + +WN M+  Y   G     ++
Sbjct: 426 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 485

Query: 529 LFNKMLEGPTKPNDITFLCAISACSH-SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +  ++L+     N +TF  A++ACS+   L+E  I +  +L    G    +    A+V +
Sbjct: 486 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVH--ALIIVAGFHDFLIVGNALVTM 543

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG--G 645
            G+ G + EA   +Q MP +P    + A++G     +N E  E  A + ++L  ++G   
Sbjct: 544 YGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHA--ENEEPNE--AVKAYKLIREKGIPA 598

Query: 646 YHVLLANIYAAASMWDKLAK 665
            ++ + ++  A S  D L K
Sbjct: 599 NYITMVSVLGACSAPDDLLK 618



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 252/483 (52%), Gaps = 2/483 (0%)

Query: 73  LFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           +FQT  L++++ K+ ++  A  VF+ +  + +A + TML GY +    ++AV    +M  
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIR-RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
             V P  +    L+  C   G +   G ++HG ++  G   D++  T +V+ Y   G + 
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
            A K+F+ MP+ ++VSW +++ G++ +G     L++  RM +EG  G+  T  ++  +  
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 308

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            +    +G  V G+ ++ GF+  V+V+ +L+ M++    VE A  VFD M   +++SWN+
Sbjct: 309 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MI+AY   G   E++R F  M     E  + T+   L  C+ + +L+ G  +H L+ +L 
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 428

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L ++V + N+L+++YS+  + + A  +F  +  + L+SWN+M+  Y Q+G+  + L    
Sbjct: 429 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 488

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           ++       +  T  S + A +    +  +K +HAL+I + F   + V  AL+ MY K G
Sbjct: 489 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLG 548

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            +  A+ +   M +    TWN +I G+  +     AV+ +  + E     N IT +  + 
Sbjct: 549 MMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLG 608

Query: 551 ACS 553
           ACS
Sbjct: 609 ACS 611



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 257/532 (48%), Gaps = 22/532 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +LK  R I  L++K GL         L++L+ +     DA  VF+ + ++    +++M+ 
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGF 169
            Y +     D +  L  +    +  V+ + T+   L  C +   +   K +H  +IV GF
Sbjct: 473 CYVQDGKCLDGLKILAELL--QMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 530

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
              L     +V MY K G + EA K+   MP+ D V+WN ++ G A+N     A+     
Sbjct: 531 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 590

Query: 230 MHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           + E+G   ++IT+VS+L A +     L+ G  +H + +  GF+S   V  +L+ MYAKCG
Sbjct: 591 IREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCG 650

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            + ++  +FDG+ +++ ++WN+M+AA    G  EEA++IF +M + GV     +    L 
Sbjct: 651 DLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLA 710

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           A A+L  LE G  +H L+ +L   +D+ +TN+ + MY KC ++     +  +   ++ +S
Sbjct: 711 ATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 770

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-----LAELSVIRYAKWI 463
           WN +I  +A++G   +A   F +M     KPD  T VS++ A     L +  +  Y    
Sbjct: 771 WNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMT 830

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGL 522
               +    E  V     +ID+  + G +  A     +M    +   W  ++     HG 
Sbjct: 831 REFGVFPGIEHCV----CIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 886

Query: 523 GKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
            + A +    +LE  P+  +D  ++   + C+ SG  E+      +L+K+ G
Sbjct: 887 LELARKTAEHLLELDPS--DDSAYVLYSNVCATSGKWED----VENLRKEMG 932


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/710 (36%), Positives = 398/710 (56%), Gaps = 37/710 (5%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + Y  L+   G +G+++  + +   +       +LF+   +++ Y+K G +++  ++
Sbjct: 38  PETFLYNNLINTYGKLGDLKNARNVFDHIP----QPNLFSWNTLLSAYSKLGYLQDMQRV 93

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGS 254
           FD MP  D+VSWN++++G+A NG    ++ +   M ++G    + IT  ++L   +N G 
Sbjct: 94  FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF----------------- 297
           + +G+ +HG   + G+ S + V + LVDMYAK G +  A  +F                 
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213

Query: 298 --------------DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
                         D M  ++ +SW ++I    + G  +EA+  F++M  +G      T 
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L AC     L+ G  +H  + +     ++ + ++L+ MY KC+ V  A  +F K++ 
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH 333

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           K ++SW AM++GY QNG   EA+  FC M+   I PD FT+ SVI + A L+ +      
Sbjct: 334 KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQF 393

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H   + S     V V  ALI +Y KCG++  A  LF  M  R   +W  ++ GY   G  
Sbjct: 394 HGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKA 453

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
              + LF  ML     P+ +TF+  +SACS +GLVE+G HYF  + K++ I P+ DHY  
Sbjct: 454 NETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC 513

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DLL RAGRL EA +FI +MP  P    +  +L +C+++ N+E+G+ AA  L +L+P  
Sbjct: 514 MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN 573

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              ++LL++IYAA   WD +AK+R  M + G++K PG S ++ KN+VH F +     P S
Sbjct: 574 PASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFS 633

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            +IY  LE+L  ++   GYVPD + + HDVE   +  +L+ HSEKLAIAFGLL    G  
Sbjct: 634 DQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQ 693

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I + KNLRVCGDCHNATKYIS +T REI+VRD  RFH FK+GVCSCGD+W
Sbjct: 694 IRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 244/511 (47%), Gaps = 39/511 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAP 136
           L+S + K   L D  RVF+ +P+     ++++L GYA    + ++V     M  D  V  
Sbjct: 77  LLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNL 136

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE------ 190
               ++ +L +  + G +  G++IHGQ+   G+   LF  + +V+MYAK G I       
Sbjct: 137 NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196

Query: 191 -------------------------EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
                                    EA ++FD MPE+D +SW TI+ G  QNG  + A+D
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVD 256

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
               M  EG   D  T  S+L A     +L  GK +H Y +R  +   + V +AL+DMY 
Sbjct: 257 KFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYC 316

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KC  V+ A  VF  M+ +NV+SW +M+  Y + G  EEA+RIF  M    + P + T+  
Sbjct: 317 KCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGS 376

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            + +CA+L  LE G   H       L   V+++N+LI++Y KC  ++ A  +F +++ + 
Sbjct: 377 VISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRD 436

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIH 464
            VSW A++ GYAQ G+ NE ++ F  M +  I PD  T V V+ A +   ++     +  
Sbjct: 437 EVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFE 496

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG-- 521
            +V            T +ID+ ++ G +  A+   + M        W  ++     +G  
Sbjct: 497 CMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNL 556

Query: 522 -LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
            +GK A E  +K+   P  P     L +I A
Sbjct: 557 EIGKWAAESLHKL--EPQNPASYILLSSIYA 585



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 200/430 (46%), Gaps = 38/430 (8%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   I K G        + LV ++ K   ++DA R+FE IP+K   +Y+TM+ G  + 
Sbjct: 158 RQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRC 217

Query: 117 ASLDDAVSFLIRMRYDDVAPVV-------------------------------YNYTYLL 145
             + +A      M   D                                    + +  +L
Sbjct: 218 RFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVL 277

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
             CG    +  GK+IH  +I   +  ++F  + +++MY KC  ++ A  +F +M  ++++
Sbjct: 278 TACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVI 337

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW  ++ G+ QNG++E A+ +   M       D  T+ S++ + AN+ SL  G   HG A
Sbjct: 338 SWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQA 397

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           + +G    V VS AL+ +Y KCG +E A  +F  MK R+ VSW ++++ Y + G   E +
Sbjct: 398 LASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETI 457

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISM 384
            +F+ ML  G+ P  VT +  L AC+  G +E+G  +   ++ + ++         +I +
Sbjct: 458 SLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDL 517

Query: 385 YSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRV---NEALNYFCKMRSKNIKPD 440
            S+  +++ A +  +++      + W  ++     NG +     A     K+  +N  P 
Sbjct: 518 LSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN--PA 575

Query: 441 SFTMVSVIPA 450
           S+ ++S I A
Sbjct: 576 SYILLSSIYA 585



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 15/320 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E ++I   II++   D     + L+ ++CK  ++  A  VF  +  K    +  ML 
Sbjct: 285 ALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLV 344

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    ++AV     M+ +++ P  +    ++  C ++  +  G + HGQ + +G   
Sbjct: 345 GYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLIC 404

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     ++ +Y KCG +E A+++F  M  RD VSW  +V+G+AQ G A   + L   M 
Sbjct: 405 FVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETML 464

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCG 288
             G   D +T V +L A +  G   + K  H +        I  +    T ++D+ ++ G
Sbjct: 465 AHGIVPDGVTFVGVLSACSRAG--LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAG 522

Query: 289 RVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPE---EAMRIFQKMLDQGVEPTNVTIM 344
           R+E A+   + M  S + + W +++++    GN E    A     K+  Q   P +  ++
Sbjct: 523 RLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQ--NPASYILL 580

Query: 345 EALHACA----DLGDLERGI 360
            +++A      D+  L +G+
Sbjct: 581 SSIYAAKGKWDDVAKLRKGM 600



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 40/216 (18%)

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV-------- 512
           K +H  +IR+      F+   LI+ Y K G +  AR +FD + + ++ +WN         
Sbjct: 25  KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84

Query: 513 -----------------------MIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCA 548
                                  ++ GY  +GL   +V ++N ML +G    N ITF   
Sbjct: 85  GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +   S+ G V+ G      + K +G +  +     +VD+  + G +N+A    +++P E 
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFK-FGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIP-EK 202

Query: 609 GITVFGAML-GACKIHKNVELGEKAANRLFELDPDE 643
            I V+  M+ G  +    VE     A +LF+  P++
Sbjct: 203 NIVVYNTMITGLLRCRFIVE-----AEQLFDNMPEK 233


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/694 (35%), Positives = 415/694 (59%), Gaps = 17/694 (2%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LLE C S   + ++    +K+GL       TKL  L+ +Y S+  A ++F+  P +   L
Sbjct: 145 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 204

Query: 106 YHTMLKGY----------AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           ++ +L+ Y          + F  +++  S  I  R D+     Y+ +  LK C  + ++ 
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDN-----YSVSIALKSCAGLRKLL 259

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GK IHG L       D+F  + ++++Y KCGQ+ +A K+F   P+ D+V W +I++G+ 
Sbjct: 260 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 319

Query: 216 QNGFAELALDLVTRMH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           Q+G  ELAL   +RM   E    D +T+VS+  A A + + ++G++VHG+  R G D+ +
Sbjct: 320 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL 379

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            ++ +L+ +Y K G ++ A  +F  M  ++++SW++M+A Y + G   + + +F +MLD+
Sbjct: 380 CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK 439

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            ++P  VT++  L ACA + +LE G+ +H+L        + +++ +L+ MY KC   ++A
Sbjct: 440 RIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKA 499

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            D+F+++  K +++W  +  GYA NG V+E++  F  M S   +PD+  +V ++  ++EL
Sbjct: 500 VDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL 559

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
            +++ A  +HA VI++ FE N F+  +LI++YAKC ++  A  +F  M  + V TW+ +I
Sbjct: 560 GILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSII 619

Query: 515 DGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
             YG HG G+ A++LF +M     TKPN++TF+  +SACSHSGL++EGI+ F  +   Y 
Sbjct: 620 AAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYK 679

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           ++P  +HY  MVDLLGR G L+ A D I  MP++ G  ++GA+LGAC+IH+N+++GE AA
Sbjct: 680 LKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAA 739

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
             LF LDP+  GY++LL+NIY+    W    K+R ++++K L K  G S+VELKNEV SF
Sbjct: 740 KNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSF 799

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
            +G   H +S  IY  L  L  +++   + P   
Sbjct: 800 IAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQ 833


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 401/675 (59%), Gaps = 7/675 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFS---LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LLKVC +   +R G+ IHG LIV   S    D++ +  ++N+Y KCG+   A K+FD MP
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIG 258
           ER++VSW  ++ G+  +GF    L L   M   +E R  +F+  V +  + ++ G +  G
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATV-VFKSCSSSGRIEEG 155

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K  HG  +++G  S   V   LV MY+ C     A  V D +   ++  ++S ++ Y+E 
Sbjct: 156 KQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  +E   + ++M  + +   N+T +  L  C++L DL     +H  + +L   ++V  +
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            ++I+MY KC KV  A  +F     + +V    ++  Y Q+    EALN F KM +K + 
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ +T    + ++AELS++++   +H LV++S +  +V V  AL++MYAK G++  AR  
Sbjct: 336 PNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R + TWN MI G+  HGLG+  +E F++M+     PN ITF+  + ACSH G V
Sbjct: 396 FSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFV 455

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E+G++YF  L K + ++P + HY  +V LL +AG   +A DF++  PIE  +  + A+L 
Sbjct: 456 EQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLN 515

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC + +N  LG+K A       P++ G +VLL+NI+A +  W+ +A+VR++M K+G++K 
Sbjct: 516 ACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKE 575

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PG S + ++N+ H F +   +HP+   IY  ++ ++ +I+  GY PD   + HDV++  +
Sbjct: 576 PGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQR 635

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E+ LS HSEKLA+A+GL+ +   S +++ KN+R+C DCH+A K IS ++ R I++RD +R
Sbjct: 636 EDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695

Query: 798 FHCFKNGVCSCGDYW 812
           FH F++G CSC DYW
Sbjct: 696 FHHFRDGQCSCCDYW 710



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 222/445 (49%), Gaps = 9/445 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY-DDVAP 136
           L++L+ K      A +VF+ +P++    +  M+KGY       + +     M + D+  P
Sbjct: 75  LINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRP 134

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             +  T + K C   G I  GK+ HG  + +G     F    +V MY+ C    EA ++ 
Sbjct: 135 NEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVL 194

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +P  DL  +++ ++G+ + G  +   +++ RM +E    D IT +S L   +N+  L 
Sbjct: 195 DDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLN 254

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           + + +H   +R GF+S V  S A+++MY KCG+V  A+ VFD   ++N+V   +++ AY 
Sbjct: 255 LARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYF 314

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           +  + EEA+ +F KM  + V P   T   +L++ A+L  L+ G  +H L+ +      V 
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVM 374

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+L++MY+K   ++ A   FS +  + +V+WN MI G++ +G   E L  F +M    
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAG 434

Query: 437 IKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             P+  T + V+ A + +  +     + + L+ +   + ++   T ++ + +K G    A
Sbjct: 435 EIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDA 494

Query: 496 RALFDMMN----ERHVTTWNVMIDG 516
               D M     E  V  W  +++ 
Sbjct: 495 E---DFMRTAPIEWDVVAWRALLNA 516



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 204/385 (52%), Gaps = 9/385 (2%)

Query: 36  SRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           SR     + ++ + C+S   ++E ++     +KSGL      +  LV ++   +   +A 
Sbjct: 132 SRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAI 191

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL--LKVCGD 150
           RV + +P    +++ + L GY +  +  +    L RM  +D+  V+ N TYL  L++C +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDL--VLDNITYLSCLRLCSN 249

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + ++   ++IH +++  GF+ ++ A   ++NMY KCG++  A ++FD    +++V   TI
Sbjct: 250 LRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTI 309

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +  + Q+   E AL+L ++M  +    +  T    L ++A +  L+ G  +HG  +++G+
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGY 369

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            + V V  ALV+MYAK G +E AR  F GM  R++V+WN+MI  +   G   E +  F +
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDR 429

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           M+  G  P  +T +  L AC+ +G +E+G+ + ++L+ +  +  D+     ++ + SK  
Sbjct: 430 MMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAG 489

Query: 390 KVDRAADIFSKLQGK-TLVSWNAMI 413
               A D       +  +V+W A++
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRALL 514


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/672 (37%), Positives = 388/672 (57%), Gaps = 4/672 (0%)

Query: 145 LKVCGDVG--EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           LK C   G   + + K+ H  L+  G   D + +  ++         + A  +F + P  
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS-LRIGKAV 261
           ++  +NT++ G   N     A+ +   M + G   D  T   +L A   +     +G ++
Sbjct: 65  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   ++ GFD  V V T LV +Y+K G +  AR VFD +  +NVVSW ++I  Y+E G  
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            EA+ +F+ +L+ G+ P + T++  L+AC+ +GDL  G ++   + +     +V +  SL
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 244

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + MY+KC  ++ A  +F  +  K +V W+A+I GYA NG   EAL+ F +M+ +N++PD 
Sbjct: 245 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           + MV V  A + L  +    W   L+    F  N  + TALID YAKCG+V  A+ +F  
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  +    +N +I G    G   AA  +F +M++   +P+  TF+  +  C+H+GLV++G
Sbjct: 365 MRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG 424

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             YF+ +   + + P ++HYG MVDL  RAG L EA D I+ MP+E    V+GA+LG C+
Sbjct: 425 HRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCR 484

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +HK+ +L E    +L EL+P   G++VLL+NIY+A+  WD+  K+R+ + +KG+QK PGC
Sbjct: 485 LHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGC 544

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S VE+   VH F  G T HP S +IY  LE+L  +++ AGY P T  +  DVE+  +E  
Sbjct: 545 SWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYF 604

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLA+AF L+++     I + KNLRVCGDCH A K +S VTGREIIVRD +RFH 
Sbjct: 605 LGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHH 664

Query: 801 FKNGVCSCGDYW 812
           F  G CSC DYW
Sbjct: 665 FTEGSCSCRDYW 676



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 255/517 (49%), Gaps = 24/517 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL + ++   L+++ GL         L+     + +   A  VF   P     LY+T+++
Sbjct: 15  SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLIVNGFS 170
           G     +  DAVS    MR    AP  + + ++LK C  +      G  +H  +I  GF 
Sbjct: 75  GMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFD 134

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+F  TG+V +Y+K G + +A K+FD +PE+++VSW  I+ G+ ++G    AL L   +
Sbjct: 135 WDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            E G R D  T+V IL A + VG L  G+ + GY   +G    V V+T+LVDMYAKCG +
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSM 254

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E AR VFDGM  ++VV W+++I  Y   G P+EA+ +F +M  + V P    ++    AC
Sbjct: 255 EEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC 314

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           + LG LE G +   L+D  +  ++  +  +LI  Y+KC  V +A ++F  ++ K  V +N
Sbjct: 315 SRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFN 374

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI----RYAKWIHAL 466
           A+I G A  G V  A   F +M    ++PD  T V ++       ++    RY   +   
Sbjct: 375 AVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM--- 431

Query: 467 VIRSCFEKNVFVMT-------ALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYG 518
                   +VF +T        ++D+ A+ G +  A+ L   M  E +   W  ++ G  
Sbjct: 432 -------SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCR 484

Query: 519 THGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSH 554
            H   + A  +  +++E  P        L  I + SH
Sbjct: 485 LHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 173/337 (51%), Gaps = 7/337 (2%)

Query: 27  TLSQRAYIPSRIYRHPSALLLEVCTSLKELRRI----LPLIIKSGLCDQHLFQTKLVSLF 82
           ++ Q  + P   +  P   +L+ CT L     +      L+IK+G       +T LV L+
Sbjct: 91  SMRQHGFAPDN-FTFP--FVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLY 147

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
            K   L+DA +VF+ IP+K    +  ++ GY +     +A+     +    + P  +   
Sbjct: 148 SKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLV 207

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L  C  VG++  G+ I G +  +G   ++F  T +V+MYAKCG +EEA ++FD M E+
Sbjct: 208 RILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEK 267

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D+V W+ ++ G+A NG  + ALD+   M  E  R D   +V +  A + +G+L +G    
Sbjct: 268 DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWAR 327

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           G      F S   + TAL+D YAKCG V  A+ VF GM+ ++ V +N++I+     G+  
Sbjct: 328 GLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVG 387

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
            A  +F +M+  G++P   T +  L  C   G ++ G
Sbjct: 388 AAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG 424


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 290/770 (37%), Positives = 432/770 (56%), Gaps = 19/770 (2%)

Query: 58  RILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYA 114
           RI+   I+    ++ LF  T L+  + K   +  A  VF  I  PD L      ++    
Sbjct: 155 RIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPD-LICWNAAIMACAG 213

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
                D A+  + RM  + + P   ++  +L  CGD   +   + IH ++   GF  D+ 
Sbjct: 214 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 273

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
             T +V MY +CG ++E+  +F+ M  R+ VSWN ++A FAQ G    A  +  RM +EG
Sbjct: 274 VATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEG 333

Query: 235 RRGDFITIVSILPAVANVGSLRIGK--AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            R + IT V+ L A  +  S  +G+  A+HG+   AG +  V V TALV MY   G ++ 
Sbjct: 334 FRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDR 393

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR  FD + ++N+VSWN+M+ AY + G   EAM +F  M  Q + P  V+ +  L  C D
Sbjct: 394 ARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED 453

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           + +  R I    + + L    + S+ N ++ M+++   ++ A   F     K  VSWN  
Sbjct: 454 VSE-ARSIHAEVVGNGL-FAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTK 511

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC- 471
           +   +    ++ A+  F  M+ +  +PD FT+VSV+   A+L  +   + I   +  +  
Sbjct: 512 VAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIE 571

Query: 472 FEKNVFVMTALIDMYAKCGA-VGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVE 528
            E++V V +A+++M AKCG+ V     LF  M  + + +  WN MI  Y  HG G+ A++
Sbjct: 572 VERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALK 631

Query: 529 LFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE--PVMDHYGAMV 585
           LF  M +    +P+  TF+  +S CSH+GLVE+GIH F   ++  GIE  PV +HY  +V
Sbjct: 632 LFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPV-EHYACLV 690

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           D+LGR G L EA DFI+KMP+     V+ ++LGAC  + ++E GE+AA    EL   +  
Sbjct: 691 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV 750

Query: 646 YHVLLANIYAAASMWDKLAKVRTIM-EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            +V+L+NIYAAA  W+   +VR  M E++  ++ PG S + +KN VH F++    HPQS 
Sbjct: 751 GYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSD 810

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            IY  LE L   I+ AGYVPDT  + HDVE+  +E LL  HSEKLAIAFGL++     +I
Sbjct: 811 AIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSI 870

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF-KNGVCSCGDYW 812
            + KNLRVC DCH ATK+I+ VT REI VRD +RFH F K+G CSCGDYW
Sbjct: 871 RVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 181/676 (26%), Positives = 309/676 (45%), Gaps = 43/676 (6%)

Query: 33  YIPSRIYRHPSALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           YIP        A LL  C     L + R++   I+K GL    L    LV ++ K  SL 
Sbjct: 21  YIPIETL----AGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           DA   F  +  +  A ++T++   +  A++ D      RM+ ++ A    N   ++ V G
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFD---LYTRMKLEERAENRPNKLTIIAVLG 133

Query: 150 DVGE-------------IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +               I + + +H  +  +    DLF  T +++ Y KCG +E A ++F
Sbjct: 134 AIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 193

Query: 197 DRMPERDLVSWNTIVAGFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            R+   DL+ WN  +   A N    + AL LV RM  EG   +  + V+IL +  +  SL
Sbjct: 194 SRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSL 253

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            + +++H      GF   V V+TALV MY +CG V+ +  VF+ M  RN VSWN+MIAA+
Sbjct: 254 PLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAF 313

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH-ACADLG-DLERGIFVHKLLDQLKLGT 373
            + G+   A  I+ +M  +G  P  +T + AL  AC+    DL     +H  +    L  
Sbjct: 314 AQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEG 373

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV +  +L++MY     +DRA   F  +  K +VSWNAM+  Y  NGR  EA+  F  M+
Sbjct: 374 DVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMK 433

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI-RSCFEKNVFVMTALIDMYAKCGAV 492
            +++ P+  + ++V+    ++S    A+ IHA V+    F +   +   ++ M+A+ G++
Sbjct: 434 RQSLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSL 490

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A A FD    +   +WN  +           A+  F  M     +P+  T +  +  C
Sbjct: 491 EEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVC 550

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG-RLNEAWDFIQKMPIE-PGI 610
           +  G +E G      L     +E  +    A+++++ + G  ++E      +MP +   +
Sbjct: 551 ADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDL 610

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFEL-------DPDEGGYHVLLANIYAAASMWDKL 663
             +  M+ A   H +   G KA  +LF +        PD   +  +L+    A  + D +
Sbjct: 611 VAWNTMIAAYAQHGH---GRKAL-KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGI 666

Query: 664 AKVRTIMEKKGLQKTP 679
                  E  G+++ P
Sbjct: 667 HCFFLAREVLGIEQQP 682



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 229/440 (52%), Gaps = 24/440 (5%)

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           +DD  P+      LL+ C    ++ +G+++H Q++  G + +      +V MY+KC  ++
Sbjct: 18  HDDYIPI-ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR---RGDFITIVSILP 247
           +A   F  +  R + +WNT++A  AQ+  A +  DL TRM  E R   R + +TI+++L 
Sbjct: 77  DANAAFSALRSRGIATWNTLIA--AQSSPAAV-FDLYTRMKLEERAENRPNKLTIIAVLG 133

Query: 248 AVAN----------VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           A+A+            S+   + VH     +  +  + V+TAL+D Y KCG VE+A  VF
Sbjct: 134 AIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 193

Query: 298 DGMKSRNVVSWNSMIAAYVEGGN---PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
             ++  +++ WN+ I A    GN   P+ A+ + ++M  +G+ P   + +  L +C D  
Sbjct: 194 SRIQVPDLICWNAAIMAC--AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHS 251

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            L     +H  +++L    DV +  +L++MY +C  VD +  +F  +  +  VSWNAMI 
Sbjct: 252 SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIA 311

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV--IRYAKWIHALVIRSCF 472
            +AQ G  + A   + +M+ +  +P+  T V+ + A    S   +  +  +H  +  +  
Sbjct: 312 AFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL 371

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           E +V V TAL+ MY   GA+  ARA FD +  +++ +WN M+  YG +G  + A+ELF  
Sbjct: 372 EGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAA 431

Query: 533 MLEGPTKPNDITFLCAISAC 552
           M      PN +++L  +  C
Sbjct: 432 MKRQSLAPNKVSYLAVLGCC 451


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/753 (34%), Positives = 422/753 (56%), Gaps = 8/753 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           IK G  D     T LV  + K ++  D   VF+ + ++    + T++ GYA+ +  ++ +
Sbjct: 124 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVL 183

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           +  +RM+ +   P  + +   L V  + G   RG ++H  ++ NG    +     ++N+Y
Sbjct: 184 TLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 243

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            KCG + +A  +FD+   + +V+WN++++G+A NG    AL +   M     R    +  
Sbjct: 244 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFA 303

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKS 302
           SI+   AN+  LR  + +H   ++ GF    N+ TAL+  Y+KC   ++  RL  +    
Sbjct: 304 SIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFL 363

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            NVVSW +MI+ +++    EEA+ +F +M  +GV P   T    L A   +   E    V
Sbjct: 364 GNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----V 419

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + +       ++  +L+  Y K  KVD AA +FS +  K +V+W+AM+ GYAQ G  
Sbjct: 420 HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGET 479

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTA 481
             A+  F ++    +KP+ FT  S++   A  +  +   K  H   I+S  + ++ V +A
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA 539

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+ MYAK G + +A  +F    E+ + +WN MI GY  HG    A+++F +M +   K +
Sbjct: 540 LLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 599

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            +TF+   +AC+H+GLVEEG  YF  + +D  I P  +H   MVDL  RAG+L +A   I
Sbjct: 600 SVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 659

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
             MP   G T++  +L AC++HK  ELG  AA ++  + P++   +VLL+N+YA +  W 
Sbjct: 660 DNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQ 719

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
           + AKVR +M ++ ++K PG S +E+KN+ ++F +G   HP   +IY  LE L   +K  G
Sbjct: 720 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 779

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           Y PDT+ +  D++D  +E +L+ HSE+LAIAFGL+ +  GS + I KNLRVCGDCH   K
Sbjct: 780 YEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIK 839

Query: 781 YISLVTGREIIVRDMHRFHCF-KNGVCSCGDYW 812
            I+ +  REI+VRD +RFH F  +GVCSCGD+W
Sbjct: 840 LIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 249/465 (53%), Gaps = 7/465 (1%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  +F+  PD+    Y ++L G+++     +A    + +++  +      ++ +LKV   
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   G+++H Q I  GF  D+   T +V+ Y K    ++   +FD M ER++V+W T+
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++G+A+N   E  L L  RM +EG + +  T  + L  +A  G    G  VH   ++ G 
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           D  + VS +L+++Y KCG V  AR++FD  + ++VV+WNSMI+ Y   G   EA+ +F  
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M    V  +  +    +  CA+L +L     +H  + +     D ++  +L+  YSKC  
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349

Query: 391 VDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           +  A  +F K  G    +VSW AMI G+ QN    EA+  F +M+ K ++P+ FT   ++
Sbjct: 350 MLDALRLF-KETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            AL  +S       +HA V+++ +E++  V TAL+D Y K G V  A  +F  ++ + + 
Sbjct: 409 TALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            W+ M+ GY   G  +AA+++F+++ +G  KPN+ TF   ++ C+
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCA 509



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 250/482 (51%), Gaps = 19/482 (3%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           ++  +++K+GL         L++L+ K  ++  A  +F+    K    +++M+ GYA   
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 278

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
              +A+     MR + V     ++  ++K+C ++ E+R  +++H  ++  GF  D    T
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT 338

Query: 178 GVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            ++  Y+KC  + +A ++F       ++VSW  +++GF QN   E A+ L + M  +G R
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T   IL A+  +        VH   ++  ++    V TAL+D Y K G+V+ A  V
Sbjct: 399 PNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKV 454

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC-ADLGD 355
           F G+ ++++V+W++M+A Y + G  E A++IF ++   GV+P   T    L+ C A    
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           + +G   H    + +L + + ++++L++MY+K   ++ A ++F + + K LVSWN+MI G
Sbjct: 515 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG 574

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC---- 471
           YAQ+G+  +AL+ F +M+ + +K DS T + V  A     ++   +    +++R C    
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634

Query: 472 -FEKNVFVMTALIDMYAKCGAVGTARALFDMM-NERHVTTWNVMIDGYGTHG---LGKAA 526
             E N    + ++D+Y++ G +  A  + D M N    T W  ++     H    LG+ A
Sbjct: 635 TKEHN----SCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLA 690

Query: 527 VE 528
            E
Sbjct: 691 AE 692



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 199/369 (53%), Gaps = 1/369 (0%)

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           A   ++  A+ +FD+ P+RD  S+ +++ GF+++G  + A  L   +   G   D     
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L   A +     G+ +H   ++ GF   V+V T+LVD Y K    +  R VFD MK R
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           NVV+W ++I+ Y      EE + +F +M D+G +P + T   AL   A+ G   RG+ VH
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            ++ +  L   + ++NSLI++Y KC  V +A  +F K + K++V+WN+MI GYA NG   
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EAL  F  MR  +++    +  S+I   A L  +R+ + +H  V++  F  +  + TAL+
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALM 341

Query: 484 DMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
             Y+KC A+  A  LF       +V +W  MI G+  +   + AV LF++M     +PN+
Sbjct: 342 VAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNE 401

Query: 543 ITFLCAISA 551
            T+   ++A
Sbjct: 402 FTYSVILTA 410



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 200/386 (51%), Gaps = 15/386 (3%)

Query: 37  RIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+     A ++++C +LKELR    L   ++K G       +T L+  + K  ++ DA R
Sbjct: 296 RLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALR 355

Query: 94  VFEPIPDKLDALYHT-MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           +F+      + +  T M+ G+ +    ++AV     M+   V P  + Y+ +L     + 
Sbjct: 356 LFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS 415

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
                 E+H Q++   +       T +++ Y K G+++EA K+F  +  +D+V+W+ ++A
Sbjct: 416 P----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLA 471

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA-VANVGSLRIGKAVHGYAMRAGFD 271
           G+AQ G  E A+ + + + + G + +  T  SIL    A   S+  GK  HG+A+++  D
Sbjct: 472 GYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLD 531

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S + VS+AL+ MYAK G +E+A  VF   + +++VSWNSMI+ Y + G   +A+ +F++M
Sbjct: 532 SSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 591

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
             + V+  +VT +    AC   G +E G  +   ++   K+       + ++ +YS+  +
Sbjct: 592 KKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 651

Query: 391 VDRAA---DIFSKLQGKTLVSWNAMI 413
           +++A    D    L G T+  W  ++
Sbjct: 652 LEKAMKVIDNMPNLAGSTI--WRTIL 675



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 132/270 (48%)

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A   R+  A  +FD    R+  S+ S++  +   G  +EA R+F  +   G+E       
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L   A L D   G  +H    +     DVS+  SL+  Y K        ++F +++ +
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W  +I GYA+N    E L  F +M+ +  +P+SFT  + +  LAE  V      +H
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            +V+++  +K + V  +LI++Y KCG V  AR LFD    + V TWN MI GY  +GL  
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSH 554
            A+ +F  M     + ++ +F   I  C++
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCAN 311



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 1/218 (0%)

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A ++F K   +   S+ +++ G++++GR  EA   F  ++   ++ D     SV+   A 
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L    + + +H   I+  F  +V V T+L+D Y K       R +FD M ER+V TW  +
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  + L +  + LF +M +  T+PN  TF  A+   +  G+   G+   T + K+ G
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 228

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           ++  +    ++++L  + G + +A     K  ++  +T
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 266


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/675 (38%), Positives = 396/675 (58%), Gaps = 4/675 (0%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
            +LL        ++   +IH Q+I+N ++   F    ++N+YAKCG + +A  +F     
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205

Query: 202 --RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             + +V+W +++   +       AL L  +M   G   +  T  SIL A A    +  G+
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H    + GFD+ + V TALVDMYAKC  + +A  VFD M  RN+VSWNSMI  +    
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325

Query: 320 NPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
             + A+ +F+ +L ++ V P  V++   L ACA++G L  G  VH ++ +  L     + 
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSL+ MY KC+  D    +F  +  + +V+WN +++G+ QN +  EA NYF  MR + I 
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD  +  +V+ + A L+ +     IH  +I+  + KN+ ++ +LI MYAKCG++  A  +
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F+ + + +V +W  MI  Y  HG     +ELF  ML    +P+ +TF+C +SACSH+G V
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           EEG+ +F S+KK + + P  +HY  MVDLLGRAG L+EA  FI+ MP++P  +V+GA+LG
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC+ + N+++G +AA RLFE++P   G +VLLAN+   +   ++  +VR +M   G++K 
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHD-VEDYVQ 737
           PGCS +++KN    F +    H  S  IY  LE L   +K  GYV +T  + + +E+  +
Sbjct: 686 PGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEE 745

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E  L  HSEKLA+AFGLL     S I I+KNLR CG CH   K  S +  REIIVRD++R
Sbjct: 746 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 805

Query: 798 FHCFKNGVCSCGDYW 812
           FH F +G CSCGDYW
Sbjct: 806 FHRFADGFCSCGDYW 820



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 247/519 (47%), Gaps = 14/519 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHTM 109
           SLK   +I   II +           L++L+ K   L+ A  +F         +  + ++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +   + F     A+S   +MR     P  + ++ +L        +  G+++H  +  +GF
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             ++F  T +V+MYAKC  +  A ++FD+MPER+LVSWN+++ GF  N   + A+ +   
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336

Query: 230 -MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            + E+    + +++ S+L A AN+G L  G+ VHG  ++ G   +  V  +L+DMY KC 
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
             +    +F  +  R+VV+WN ++  +V+    EEA   F  M  +G+ P   +    LH
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           + A L  L +G  +H  + +L    ++ +  SLI+MY+KC  +  A  +F  ++   ++S
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 516

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI  Y  +G  N+ +  F  M S+ I+P   T V V+ A +    +      H   +
Sbjct: 517 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSM 575

Query: 469 RSCFEKNVFV--MTALIDMYAKCGAVGTARALFDMMNERHV-TTWNVMIDG---YGTHGL 522
           +   + N        ++D+  + G +  A+   + M  +   + W  ++     YG   +
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           G+ A E   +M   P  P +   L  +  C+ SG +EE 
Sbjct: 636 GREAAERLFEM--EPYNPGNYVLLANM--CTRSGRLEEA 670



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 173/365 (47%), Gaps = 19/365 (5%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGL 68
           F N+   + +   K  L ++  IP+ +     + +L  C ++  L   R++  +++K GL
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEV---SVSSVLSACANMGGLNFGRQVHGVVVKYGL 378

Query: 69  CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
                    L+ ++ K     +  ++F+ + D+    ++ ++ G+ +    ++A ++   
Sbjct: 379 VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWV 438

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           MR + + P   +++ +L     +  + +G  IH Q+I  G+  ++  +  ++ MYAKCG 
Sbjct: 439 MRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGS 498

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           + +AY++F+ + + +++SW  +++ +  +G A   ++L   M  EG     +T V +L A
Sbjct: 499 LVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 558

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNVV 306
            ++ G +  G A H  +M+   D          +VD+  + G ++ A+   + M  +   
Sbjct: 559 CSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTP 617

Query: 307 S-WNSMIAAYVEGGN----PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           S W +++ A  + GN     E A R+F+    +   P N  ++  +  C   G LE    
Sbjct: 618 SVWGALLGACRKYGNLKMGREAAERLFEM---EPYNPGNYVLLANM--CTRSGRLEEANE 672

Query: 362 VHKLL 366
           V +L+
Sbjct: 673 VRRLM 677


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 290/770 (37%), Positives = 432/770 (56%), Gaps = 19/770 (2%)

Query: 58  RILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYA 114
           RI+   I+    ++ LF  T L+  + K   +  A  VF  I  PD L      ++    
Sbjct: 151 RIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPD-LICWNAAIMACAG 209

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
                D A+  + RM  + + P   ++  +L  CGD   +   + IH ++   GF  D+ 
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 269

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
             T +V MY +CG ++E+  +F+ M  R+ VSWN ++A FAQ G    A  +  RM +EG
Sbjct: 270 VATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEG 329

Query: 235 RRGDFITIVSILPAVANVGSLRIGK--AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            R + IT V+ L A  +  S  +G+  A+HG+   AG +  V V TALV MY   G ++ 
Sbjct: 330 FRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDR 389

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR  FD + ++N+VSWN+M+ AY + G   EAM +F  M  Q + P  V+ +  L  C D
Sbjct: 390 ARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED 449

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           + +  R I    + + L    + S+ N ++ M+++   ++ A   F     K  VSWN  
Sbjct: 450 VSE-ARSIHAEVVGNGL-FAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTK 507

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC- 471
           +   +    ++ A+  F  M+ +  +PD FT+VSV+   A+L  +   + I   +  +  
Sbjct: 508 VAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIE 567

Query: 472 FEKNVFVMTALIDMYAKCGA-VGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVE 528
            E++V V +A+++M AKCG+ V     LF  M  + + +  WN MI  Y  HG G+ A++
Sbjct: 568 VERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALK 627

Query: 529 LFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE--PVMDHYGAMV 585
           LF  M +    +P+  TF+  +S CSH+GLVE+GIH F   ++  GIE  PV +HY  +V
Sbjct: 628 LFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPV-EHYACLV 686

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           D+LGR G L EA DFI+KMP+     V+ ++LGAC  + ++E GE+AA    EL   +  
Sbjct: 687 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV 746

Query: 646 YHVLLANIYAAASMWDKLAKVRTIM-EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
            +V+L+NIYAAA  W+   +VR  M E++  ++ PG S + +KN VH F++    HPQS 
Sbjct: 747 GYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSD 806

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            IY  LE L   I+ AGYVPDT  + HDVE+  +E LL  HSEKLAIAFGL++     +I
Sbjct: 807 EIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSI 866

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF-KNGVCSCGDYW 812
            + KNLRVC DCH ATK+I+ VT REI VRD +RFH F K+G CSCGDYW
Sbjct: 867 RVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 180/672 (26%), Positives = 308/672 (45%), Gaps = 39/672 (5%)

Query: 33  YIPSRIYRHPSALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           YIP        A LL  C     L + R++   I+K GL    L    LV ++ K  SL 
Sbjct: 21  YIPIETL----AGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           DA   F  +  +  A ++T++   +  A++ D      RM+ ++ A    N   ++ V G
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFD---LYTRMKLEERAENRPNRLTIIAVLG 133

Query: 150 DVGE---------IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            +             + + +H  +  +    DLF  T +++ Y KCG +E A ++F R+ 
Sbjct: 134 AIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ 193

Query: 201 ERDLVSWNTIVAGFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             DL+ WN  +   A N    + AL LV RM  EG   +  + V+IL +  +  SL + +
Sbjct: 194 VPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 253

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
           ++H      GF   V V+TALV MY +CG V+ +  VF+ M  RN VSWN+MIAA+ + G
Sbjct: 254 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 313

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALH-ACADLG-DLERGIFVHKLLDQLKLGTDVSM 377
           +   A  I+ +M  +G  P  +T + AL  AC+    DL     +H  +    L  DV +
Sbjct: 314 HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV 373

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L++MY     +DRA   F  +  K +VSWNAM+  Y  NGR  EA+  F  M+ +++
Sbjct: 374 GTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSL 433

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVI-RSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            P+  + ++V+    ++S    A+ IHA V+    F +   +   ++ M+A+ G++  A 
Sbjct: 434 APNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAM 490

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
           A FD    +   +WN  +           A+  F  M     +P+  T +  +  C+  G
Sbjct: 491 AAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLG 550

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG-RLNEAWDFIQKMPIE-PGITVFG 614
            +E G      L     +E  +    A+++++ + G  ++E      +MP +   +  + 
Sbjct: 551 TLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWN 610

Query: 615 AMLGACKIHKNVELGEKAANRLFEL-------DPDEGGYHVLLANIYAAASMWDKLAKVR 667
            M+ A   H +   G KA  +LF +        PD   +  +L+    A  + D +    
Sbjct: 611 TMIAAYAQHGH---GRKAL-KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFF 666

Query: 668 TIMEKKGLQKTP 679
              E  G+++ P
Sbjct: 667 LAREVLGIEQQP 678



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 227/436 (52%), Gaps = 20/436 (4%)

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           +DD  P+      LL+ C    ++ +G+++H Q++  G + +      +V MY+KC  ++
Sbjct: 18  HDDYIPI-ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR---RGDFITIVSILP 247
           +A   F  +  R + +WNT++A  AQ+  A +  DL TRM  E R   R + +TI+++L 
Sbjct: 77  DANAAFSALRSRGIATWNTLIA--AQSSPAAV-FDLYTRMKLEERAENRPNRLTIIAVLG 133

Query: 248 AVANVGSLRI------GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           A+A+             + VH     +  +  + V+TAL+D Y KCG VE+A  VF  ++
Sbjct: 134 AIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ 193

Query: 302 SRNVVSWNSMIAAYVEGGN---PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
             +++ WN+ I A    GN   P+ A+ + ++M  +G+ P   + +  L +C D   L  
Sbjct: 194 VPDLICWNAAIMAC--AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPL 251

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
              +H  +++L    DV +  +L++MY +C  VD +  +F  +  +  VSWNAMI  +AQ
Sbjct: 252 ARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ 311

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV--IRYAKWIHALVIRSCFEKNV 476
            G  + A   + +M+ +  +P+  T V+ + A    S   +  +  +H  +  +  E +V
Sbjct: 312 CGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDV 371

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V TAL+ MY   GA+  ARA FD +  +++ +WN M+  YG +G  + A+ELF  M   
Sbjct: 372 MVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQ 431

Query: 537 PTKPNDITFLCAISAC 552
              PN +++L  +  C
Sbjct: 432 SLAPNKVSYLAVLGCC 447


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/721 (34%), Positives = 410/721 (56%), Gaps = 8/721 (1%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K G C +      +++L+ +  S   A RVF  +P +    ++T++ G+A+    + A+ 
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M++  ++P     + LL  C  +G++++G ++H  L   G S D      ++++Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG +E A  +F+     ++V WN ++  F Q      + +L  +M   G R +  T   
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL        + +G+ +H  +++ GF+S + VS  L+DMY+K G +E AR V + +K ++
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSW SMIA YV+    ++A+  F++M   G+ P N+ +  A+  CA +  + +G+ +H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            +       DVS+ N+L+++Y++C ++  A   F +++ K  ++WN ++ G+AQ+G   E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M    +K + FT VS + A A L+ I+  K IHA VI++       V  ALI 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y KCG+   A+  F  M+ER+  +WN +I     HG G  A++LF++M +   KPND+T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH GLVEEG+ YF S+  +YGI P  DHY  ++D+ GRAG+L+ A  FI++M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           PI     V+  +L ACK+HKN+E+GE AA  L EL+P +   +VLL+N YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR +M  +G++K PG S +E+KN VH+F+ G   HP +++IY FL  + D +   GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +   + HD E   ++     HSEKLA+ FGL++  P   + + KNLRV        KY S
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV-------EKYTS 883

Query: 784 L 784
           L
Sbjct: 884 L 884



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 287/559 (51%), Gaps = 7/559 (1%)

Query: 44  ALLLEVCTSLKELRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A  L  C       +++P I    +  GL    +    L+ L+ K   +  A RVFE + 
Sbjct: 45  ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + +  +  ML GYA+    ++A+    +M    V P  Y  + +L  C       +G+ 
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH Q   +GF  ++F    V+ +Y +CG    A ++F  MP RD V++NT+++G AQ G 
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL++   M   G   D +TI S+L A A++G L+ G  +H Y  +AG  S   +  +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y KCG VETA ++F+     NVV WN M+ A+ +  +  ++  +F +M   G+ P 
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C    +++ G  +H L  +    +D+ ++  LI MYSK   +++A  +  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L+ K +VSW +MI GY Q+    +AL  F +M+   I PD+  + S I   A ++ +R 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IHA +  S +  +V +  AL+++YA+CG +  A + F+ +  +   TWN ++ G+  
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQ 524

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
            GL + A+++F +M +   K N  TF+ A+SA ++   +++G   +   +K  +  E  +
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEV 584

Query: 579 DHYGAMVDLLGRAGRLNEA 597
            +  A++ L G+ G   +A
Sbjct: 585 GN--ALISLYGKCGSFEDA 601



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 240/461 (52%), Gaps = 4/461 (0%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C SL +L++   L   + K+G+   ++ +  L+ L+ K   +  A  +F       
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ ML  + +   L  +     +M+   + P  + Y  +L+ C    EI  G++IH 
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF  D++    +++MY+K G +E+A ++ + + E+D+VSW +++AG+ Q+   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL     M + G   D I + S +   A + ++R G  +H     +G+   V++  ALV+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YA+CGR+  A   F+ ++ ++ ++WN +++ + + G  EEA+++F +M   GV+    T
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFT 549

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            + AL A A+L ++++G  +H  + +     +  + N+LIS+Y KC   + A   FS++ 
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
            +  VSWN +I   +Q+GR  EAL+ F +M+ + IKP+  T + V+ A + + ++     
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLS 669

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +  ++               +ID++ + G +  A+   + M
Sbjct: 670 YFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/718 (36%), Positives = 417/718 (58%), Gaps = 14/718 (1%)

Query: 25  KHTLSQRAYIPSRIYRHPSA---------LLLEVCTSLK--ELRRILPLIIKS-GLCDQH 72
           +H L+   Y+  +++ HP+A          +++ C +L    L R++    ++ GL +  
Sbjct: 119 QHHLAVLFYV--KMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDV 176

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
              + LV ++     L +A   F+ IP++   L++ M+ G  K   +D AV     MR  
Sbjct: 177 YVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRAS 236

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
              P        L VC    ++  G ++H   +  G   ++     ++ MYAKC  +++A
Sbjct: 237 GCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDA 296

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           +++F+ MP+ DLV+WN +++G  QNG    A  L   M   G R D IT+VS+LPA+ ++
Sbjct: 297 WRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDL 356

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
             L+ GK VHGY +R   +  V + +ALVD+Y KC  V  A+ ++D  ++ +VV  ++MI
Sbjct: 357 NGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMI 416

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + YV  G  EEA+++F+ +L+Q ++P  VTI   L  CA +  L  G  +H  + +    
Sbjct: 417 SGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYE 476

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + ++L+ MY+KC ++D +  IF K+  K  V+WN+MI  ++QNG+  EAL+ F +M
Sbjct: 477 RKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQM 536

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             + IK ++ T+ + + A A L  I Y K IH + I+   + ++F  +ALIDMYAKCG +
Sbjct: 537 CMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNL 596

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  +F+ M +++  +WN +I  YG HGL K +V L + M E   KP+ +TFL  ISAC
Sbjct: 597 ELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISAC 656

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +H+GLVEEG+  F  + K Y I P M+H+  MVDL  R+G+L++A  FI  MP +P   +
Sbjct: 657 AHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGI 716

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA+L AC++H+NVEL + A+  LF+LDP   GY+VL++NI A A  WD ++KVR +M+ 
Sbjct: 717 WGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKD 776

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH 730
             + K PG S V++ N  H F +    HP+S+ IYT L+TL+ E++  GYVP  +  H
Sbjct: 777 NKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDLCH 834


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/721 (34%), Positives = 410/721 (56%), Gaps = 8/721 (1%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K G C +      +++L+ +  S   A RVF  +P +    ++T++ G+A+    + A+ 
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M++  ++P     + LL  C  +G++++G ++H  L   G S D      ++++Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG +E A  +F+     ++V WN ++  F Q      + +L  +M   G R +  T   
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL        + +G+ +H  +++ GF+S + VS  L+DMY+K G +E AR V + +K ++
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSW SMIA YV+    ++A+  F++M   G+ P N+ +  A+  CA +  + +G+ +H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            +       DVS+ N+L+++Y++C ++  A   F +++ K  ++WN ++ G+AQ+G   E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M    +K + FT VS + A A L+ I+  K IHA VI++       V  ALI 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y KCG+   A+  F  M+ER+  +WN +I     HG G  A++LF++M +   KPND+T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH GLVEEG+ YF S+  +YGI P  DHY  ++D+ GRAG+L+ A  FI++M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           PI     V+  +L ACK+HKN+E+GE AA  L EL+P +   +VLL+N YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR +M  +G++K PG S +E+KN VH+F+ G   HP +++IY FL  + D +   GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +   + HD E   ++     HSEKLA+ FGL++  P   + + KNLRV        KY S
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV-------EKYTS 883

Query: 784 L 784
           L
Sbjct: 884 L 884



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 287/559 (51%), Gaps = 7/559 (1%)

Query: 44  ALLLEVCTSLKELRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A  L  C       +++P I    +  GL    +    L+ L+ K   +  A RVFE + 
Sbjct: 45  ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + +  +  ML GYA+    ++A+    +M    V P  Y  + +L  C       +G+ 
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH Q   +GF  ++F    V+ +Y +CG    A ++F  MP RD V++NT+++G AQ G 
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL++   M   G   D +TI S+L A A++G L+ G  +H Y  +AG  S   +  +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y KCG VETA ++F+     NVV WN M+ A+ +  +  ++  +F +M   G+ P 
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C    +++ G  +H L  +    +D+ ++  LI MYSK   +++A  +  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L+ K +VSW +MI GY Q+    +AL  F +M+   I PD+  + S I   A ++ +R 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IHA +  S +  +V +  AL+++YA+CG +  A + F+ +  +   TWN ++ G+  
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQ 524

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
            GL + A+++F +M +   K N  TF+ A+SA ++   +++G   +   +K  +  E  +
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEV 584

Query: 579 DHYGAMVDLLGRAGRLNEA 597
            +  A++ L G+ G   +A
Sbjct: 585 GN--ALISLYGKCGSFEDA 601



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 240/461 (52%), Gaps = 4/461 (0%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C SL +L++   L   + K+G+   ++ +  L+ L+ K   +  A  +F       
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ ML  + +   L  +     +M+   + P  + Y  +L+ C    EI  G++IH 
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF  D++    +++MY+K G +E+A ++ + + E+D+VSW +++AG+ Q+   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL     M + G   D I + S +   A + ++R G  +H     +G+   V++  ALV+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YA+CGR+  A   F+ ++ ++ ++WN +++ + + G  EEA+++F +M   GV+    T
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFT 549

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            + AL A A+L ++++G  +H  + +     +  + N+LIS+Y KC   + A   FS++ 
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
            +  VSWN +I   +Q+GR  EAL+ F +M+ + IKP+  T + V+ A + + ++     
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLS 669

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +  ++               +ID++ + G +  A+   + M
Sbjct: 670 YFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/572 (44%), Positives = 352/572 (61%), Gaps = 2/572 (0%)

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            SIL +    GSLR G+ +HG  + +G      +ST LVD+YA CG+V  AR +FDGM  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           RNV  WN +I AY   G  E A+R+++ M++ GVEP N T    L ACA L DLE G  V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H+ +   + G DV +   ++ MY+KC  VD A  +F  +  +  V WN+MI  Y QNGR 
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EAL     M +  I P   T+VS + A A+ + +   + +H    R  F     + T+L
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPN 541
           +DMYAK G V  AR LF+ + +R + +WN MI GYG HG    A+ LFNKM  +    P+
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           +ITF+  +SAC+H G+VEE   +F  +   Y I+P + HY  ++D+LG  GR  EA+D I
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
           + M IEP   ++GA+L  CKIHKNVELGE A  +L EL+P++ G +V L+NIYA +  W+
Sbjct: 426 KGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWE 485

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
           K A+VR +M  +GL+K   CS +ELK + H F  G   HP+S  IY  LE L   +  AG
Sbjct: 486 KAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAG 545

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           YVPD   + H+V+D  + N++ SHSE+LAIAFGL+++ PG+ + + KNLRVC DCH   K
Sbjct: 546 YVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIK 605

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IS +  REII+RD++R+H F NG CSC DYW
Sbjct: 606 LISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 217/410 (52%), Gaps = 11/410 (2%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           +++T +L+ C   G +R G+++HG+L+V+G   D    T +V++YA CGQ+  A ++FD 
Sbjct: 63  HHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDG 122

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MP+R++  WN ++  +A+ G  E A+ L   M E G   D  T   +L A A +  L  G
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETG 182

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + VH       +   V V   +VDMYAKCG V+ AR VFDG+  R+ V WNSMIAAY + 
Sbjct: 183 REVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQN 242

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G P EA+ + + M   G+ PT  T++ A+ A AD   L RG  +H    +   G    + 
Sbjct: 243 GRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK 302

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NI 437
            SL+ MY+K   V  A  +F +L  + LVSWNAMI GY  +G  +EAL  F KM+    +
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQV 362

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTAR 496
            PD+ T V V+ A     ++  AK    L++ +   +  V   T +ID+    G    A 
Sbjct: 363 TPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAY 422

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPND 542
            L   M+ E     W  +++G   H    LG+ A++   K++E   +P D
Sbjct: 423 DLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQ---KLIE--LEPED 467



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 207/410 (50%), Gaps = 14/410 (3%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCT---SLKELRRILPLIIKSGL 68
           F  S P  +      T  + A  P   + H S  +L+ C    SL+  R++   ++ SGL
Sbjct: 42  FAASPPPPS------TNPRLASSPHAYHHHTS--ILQSCVASGSLRAGRQLHGRLLVSGL 93

Query: 69  CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
               +  TKLV L+     +  A R+F+ +P +   L++ +++ YA+    + AV     
Sbjct: 94  GPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRG 153

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M    V P  + Y  +LK C  + ++  G+E+H ++    +  D+F   GVV+MYAKCG 
Sbjct: 154 MVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGC 213

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           +++A  +FD +  RD V WN+++A + QNG    AL L   M   G      T+VS + A
Sbjct: 214 VDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSA 273

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            A+  +L  G+ +HG+  R GF     + T+LVDMYAK G V+ AR++F+ +  R +VSW
Sbjct: 274 AADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSW 333

Query: 309 NSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGI-FVHKLL 366
           N+MI  Y   G+ +EA+ +F KM  D  V P N+T +  L AC   G +E    F + ++
Sbjct: 334 NAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMV 393

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILG 415
           +   +   V     +I +     + + A D+   +  +     W A++ G
Sbjct: 394 NAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNG 443


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/570 (42%), Positives = 352/570 (61%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           SI+ A A   +L   +A+H +  R+       +  +L+ MY KCG V  AR VFDG+ +R
Sbjct: 67  SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +VVSW  +I  Y +   P EA+ +   ML     P+  T    L A    G    G  +H
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMH 186

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +  L  DV + ++L+ MY++C+++D A  +F  L  K  VSWNA+I G+A+ G   
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGE 246

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
             L  F +M+        FT  SV  ALA +  +   +W+HA +I+S  +   FV   ++
Sbjct: 247 TTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTIL 306

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MYAK G++  AR +FD +++R + TWN M+  +  +GLGK AV  F ++ +   + N I
Sbjct: 307 GMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQI 366

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFL  ++ACSH GLV+EG  YF  + KDY +EP +DHY + VDLLGRAG L EA  F+ K
Sbjct: 367 TFLSVLTACSHGGLVKEGKQYF-DMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   V+GA+LGAC++HKN ++G+ AA+ +FELDP++ G  VLL NIYA+   WD  
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDA 485

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE++N VH F +  + HP+S+ IY   E +   IK AGYV
Sbjct: 486 ARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYV 545

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P+T+ +   +++  +E  L  HSEK+A+AF L+N   G+TI I KN+R+CGDCH+A +Y+
Sbjct: 546 PNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYV 605

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V  REI+VRD +RFH F NG CSCGDYW
Sbjct: 606 SEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 192/389 (49%), Gaps = 1/389 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y  ++  C     +   + IH  L  +  + D F +  +++MY KCG + +A
Sbjct: 57  ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD +P RD+VSW  ++ G+AQN     AL L+  M     R    T  S L A    
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G   IG+ +H  A++   D  V V +AL+DMYA+C +++ A  VFD + S+N VSWN++I
Sbjct: 177 GGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALI 236

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           A +   G+ E  +  F +M   G   T+ T      A A +G LE+G +VH  + +    
Sbjct: 237 AGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQK 296

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + N+++ MY+K   +  A  +F ++  + LV+WN M+  +AQ G   EA+ +F ++
Sbjct: 297 LTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEI 356

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   I+ +  T +SV+ A +   +++  K    ++     E  +    + +D+  + G +
Sbjct: 357 RKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLL 416

Query: 493 GTARA-LFDMMNERHVTTWNVMIDGYGTH 520
             A   +F M  E     W  ++     H
Sbjct: 417 KEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 182/372 (48%), Gaps = 4/372 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  C   K L   R I   + +S L         L+ ++CK  ++SDA  VF+ IP + 
Sbjct: 68  IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRD 127

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GYA+     +A+  L  M      P  + +T  LK  G  G    G+++H 
Sbjct: 128 VVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHA 187

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +      D++  + +++MYA+C Q++ A ++FD +  ++ VSWN ++AGFA+ G  E 
Sbjct: 188 LAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGET 247

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L     M   G      T  S+  A+A +G+L  G+ VH + +++G      V+  ++ 
Sbjct: 248 TLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILG 307

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  AR VFD +  R++V+WN+M+ A+ + G  +EA+  F+++   G++   +T
Sbjct: 308 MYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQIT 367

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA-ADIFSKL 401
            +  L AC+  G ++ G     ++    +  ++    S + +  +   +  A   +F   
Sbjct: 368 FLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 427

Query: 402 QGKTLVSWNAMI 413
              T   W A++
Sbjct: 428 MEPTAAVWGALL 439



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 113/238 (47%)

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
            +R    +L   + PT       + ACA   +L     +H  L + +L  D  + NSLI 
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC  V  A  +F  +  + +VSW  +I GYAQN    EAL     M     +P  FT
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             S + A          + +HAL ++   +++V+V +AL+DMYA+C  +  A  +FD ++
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
            ++  +WN +I G+   G G+  +  F +M          T+    SA +  G +E+G
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQG 283


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 420/737 (56%), Gaps = 2/737 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K  +L +A ++F+ + ++    +  ++ GY++     +A    ++M+     P 
Sbjct: 89  MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 148

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  LL  C       +  ++  Q+I  G+   L     +V+ Y K  +++ A ++F 
Sbjct: 149 YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFK 208

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPE D VS+N ++ G++++G  E A++L   M   G +    T  ++L A   +  + +
Sbjct: 209 EMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVL 268

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H + ++  F   V VS AL+D Y+K   V  AR +FD M  ++ VS+N +I+ Y  
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAW 328

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  + A  +F+++     +         L   ++  D E G  +H         +++ +
Sbjct: 329 DGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 388

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NSL+ MY+KC K + A  IF+ L  ++ V W AMI  Y Q G   E L  F KMR  ++
Sbjct: 389 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 448

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
             D  T  S++ A A ++ +   K +H+ +I+S F  NVF  +AL+D+YAKCG++  A  
Sbjct: 449 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 508

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F  M +R++ +WN MI  Y  +G  +A ++ F +M+    +P+ ++FL  +SACSHSGL
Sbjct: 509 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 568

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG+ +F S+ + Y ++P  +HY ++VD+L R+GR NEA   + +MPI+P   ++ ++L
Sbjct: 569 VEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628

Query: 618 GACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
            AC+IHKN EL  +AA++LF ++   +   +V ++NIYAAA  W+ ++KV   M  +G++
Sbjct: 629 NACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVK 688

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDY 735
           K P  S VE+K+E H F +    HPQ + I   ++ L   ++  GY PDT+ ++H+ ++ 
Sbjct: 689 KLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEK 748

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +   L  HSE+LAIAF L+++  GS I + KNLR C DCH A K IS + GREI VRD 
Sbjct: 749 FKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDS 808

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH F++G CSCGD+W
Sbjct: 809 TRFHHFRDGFCSCGDFW 825



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 241/485 (49%), Gaps = 10/485 (2%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           ++ ++   IIK G   + +    LV  +CK N L  A ++F+ +P+     Y+ M+ GY+
Sbjct: 167 QITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYS 226

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG--EIRRGKEIHGQLIVNGFSLD 172
           K    + AV+  + M+   + P  + +  +L  C ++G  +I  G++IH  +I   F  +
Sbjct: 227 KDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWN 284

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F    +++ Y+K   + +A K+FD MPE+D VS+N I++G+A +G  + A DL   +  
Sbjct: 285 VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQF 344

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                      ++L   +N     +G+ +H   +    DS + V  +LVDMYAKCG+ E 
Sbjct: 345 TAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 404

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A ++F  +  R+ V W +MI+AYV+ G  EE +++F KM    V     T    L A A 
Sbjct: 405 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 464

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           +  L  G  +H  + +    ++V   ++L+ +Y+KC  +  A   F ++  + +VSWNAM
Sbjct: 465 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAM 524

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW-IHALVIRSC 471
           I  YAQNG     L  F +M    ++PDS + + V+ A +   ++    W  +++     
Sbjct: 525 ISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK 584

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG----LGKAA 526
            +       +++DM  + G    A  L  +M  +     W+ +++    H       +AA
Sbjct: 585 LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAA 644

Query: 527 VELFN 531
            +LFN
Sbjct: 645 DQLFN 649



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 223/491 (45%), Gaps = 33/491 (6%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-- 217
           I  +++  GF  D       V  + K G++ +A ++F++MP ++ VS N +++G+ ++  
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 218 ------------------------GFAEL-----ALDLVTRMHEEGRRGDFITIVSILPA 248
                                   G+++L     A +L  +M   G   D++T V++L  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
                       V    ++ G+DS + V   LVD Y K  R++ A  +F  M   + VS+
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N+MI  Y + G  E+A+ +F +M + G++PT  T    L A   L D+  G  +H  + +
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIK 278

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V ++N+L+  YSK   V  A  +F ++  +  VS+N +I GYA +G+   A + 
Sbjct: 279 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 338

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +++        F   +++   +        + IHA  I +  +  + V  +L+DMYAK
Sbjct: 339 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 398

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG    A  +F  +  R    W  MI  Y   G  +  ++LFNKM +     +  TF   
Sbjct: 399 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           + A +    +  G    + + K   +  V     A++D+  + G + +A    Q+MP + 
Sbjct: 459 LRASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMP-DR 516

Query: 609 GITVFGAMLGA 619
            I  + AM+ A
Sbjct: 517 NIVSWNAMISA 527



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 223/493 (45%), Gaps = 69/493 (13%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L +   +    ++ GFD   + S   V  + K G +  AR +F+ M  +N VS N MI+ 
Sbjct: 33  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92

Query: 315 YVEGGNPEEAMRIFQKMLDQ-------------------------------GVEPTNVTI 343
           YV+ GN  EA ++F  M+++                               G EP  VT 
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 344 MEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMT--NSLISMYSKCKKVDRAADIFSK 400
           +  L  C      E G  + ++  Q +KLG D  +   N+L+  Y K  ++D A  +F +
Sbjct: 153 VTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKE 209

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +     VS+NAMI GY+++G   +A+N F +M++  +KP  FT  +V+ A   L  I   
Sbjct: 210 MPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLG 269

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH+ VI++ F  NVFV  AL+D Y+K  +V  AR LFD M E+   ++NV+I GY   
Sbjct: 270 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWD 329

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
           G  K A +LF ++           F   +S  S++   E G  IH  T +      +  +
Sbjct: 330 GKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT---ADSEI 386

Query: 579 DHYGAMVDLLGRAGRLNEA--------------WD-----FIQKMPIEPGITVFGAMLGA 619
               ++VD+  + G+  EA              W      ++QK   E G+ +F  M  A
Sbjct: 387 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 446

Query: 620 CKIHKNVELGE--KAANRLFELDPDEGGYHVL-----LANIYAAASMWDKLAKVRTIMEK 672
             I          +A+  +  L   +  +  +     ++N+++ +++ D  AK  +I + 
Sbjct: 447 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 506

Query: 673 -KGLQKTPGCSLV 684
            +  Q+ P  ++V
Sbjct: 507 VQTFQEMPDRNIV 519



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 144/300 (48%), Gaps = 7/300 (2%)

Query: 40  RHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           + P A +L + ++  +    R+I    I +    + L    LV ++ K     +A  +F 
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            +  +    +  M+  Y +    ++ +    +MR   V      +  LL+    +  +  
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK++H  +I +GF  ++F+ + ++++YAKCG I++A + F  MP+R++VSWN +++ +AQ
Sbjct: 471 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 530

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIV 274
           NG AE  L     M   G + D ++ + +L A ++ G +  G   H  +M   +  D   
Sbjct: 531 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRR 589

Query: 275 NVSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
               ++VDM  + GR  E  +L+ +     + + W+S++ A     N E A R   ++ +
Sbjct: 590 EHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFN 649


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/616 (40%), Positives = 380/616 (61%), Gaps = 2/616 (0%)

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MP+R+LVSW  +++G +QN     A+     M   G         S + A A++GS+ +G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K +H  A++ G  S + V + L DMY+KCG +  A  VF+ M  ++ VSW +MI  Y + 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+  F+KM+D+ V      +   L AC  L   + G  VH  + +L   +D+ + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 379 NSLISMYSKCKKVDRAADIFS-KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           N+L  MYSK   ++ A+++F    + + +VS+  +I GY +  ++ + L+ F ++R + I
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P+ FT  S+I A A  + +     +HA V++  F+++ FV + L+DMY KCG +  A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            FD + +     WN ++  +G HGLGK A+++F +M++   KPN ITF+  ++ CSH+GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG+ YF S+ K YG+ P  +HY  ++DLLGRAGRL EA +FI +MP EP    + + L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GAC+IH + E+G+ AA +L +L+P   G  VLL+NIYA    W+ +  VR  M    ++K
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYV 736
            PG S V++  + H F +    HP+   IY  L+TL+D+IKAAGYVP T+S+  D++D +
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSM 540

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E LL  HSE++A+AF L++   G  I ++KNLRVC DCH+A K+IS VTGR+IIVRD  
Sbjct: 541 KEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNS 600

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F +G CSCGDYW
Sbjct: 601 RFHHFTDGSCSCGDYW 616



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 227/448 (50%), Gaps = 18/448 (4%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +P +    +  M+ G ++ +   +A+     MR     P  + ++  ++ C  +G I  G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K++H   +  G   +LF  + + +MY+KCG + +A K+F+ MP +D VSW  ++ G+++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  E AL    +M +E    D   + S L A   + + + G++VH   ++ GF+S + V 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 278 TALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
            AL DMY+K G +E+A  VF G+ S  RNVVS+  +I  YVE    E+ + +F ++  QG
Sbjct: 181 NALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           +EP   T    + ACA+   LE+G  +H  + ++    D  +++ L+ MY KC  +++A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
             F ++   T ++WN+++  + Q+G   +A+  F +M  + +KP++ T +S++   +   
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 456 VIRYAKWIHALVIRSCFEKNVFVM------TALIDMYAKCGAVGTARALFDMMN-ERHVT 508
           ++        L      +K   V+      + +ID+  + G +  A+   + M  E +  
Sbjct: 360 LVE-----EGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414

Query: 509 TWNVMIDGYGTHG---LGKAAVELFNKM 533
            W   +     HG   +GK A E   K+
Sbjct: 415 GWCSFLGACRIHGDKEMGKLAAEKLVKL 442



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 167/318 (52%), Gaps = 4/318 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           +  C SL  +   +++  L +K G+  +    + L  ++ K  ++ DA +VFE +P K +
Sbjct: 48  IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDE 107

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             +  M+ GY+K    ++A+    +M  ++V    +     L  CG +   + G+ +H  
Sbjct: 108 VSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSS 167

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAEL 222
           ++  GF  D+F    + +MY+K G +E A  +F    E R++VS+  ++ G+ +    E 
Sbjct: 168 VVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK 227

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +   +  +G   +  T  S++ A AN  +L  G  +H   M+  FD    VS+ LVD
Sbjct: 228 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 287

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG +E A   FD +     ++WNS+++ + + G  ++A++IF++M+D+GV+P  +T
Sbjct: 288 MYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAIT 347

Query: 343 IMEALHACADLGDLERGI 360
            +  L  C+  G +E G+
Sbjct: 348 FISLLTGCSHAGLVEEGL 365


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/717 (35%), Positives = 416/717 (58%), Gaps = 14/717 (1%)

Query: 26  HTLSQRAYIPSRIYRHPSA---------LLLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           H+L+   Y+  +++ HP+A          +++ C +L  +   R +      +GL     
Sbjct: 120 HSLAVLFYV--KMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVY 177

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + L+ ++     L DA   F+ +P +   L++ M+ GY K   +  AV     MR   
Sbjct: 178 VGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSG 237

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
             P        L VC    ++  G ++H   +  G   ++     +++MYAKC  +++A+
Sbjct: 238 CEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAW 297

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++F+ +P  DLV+WN +++G  QNG  + AL L   M   G R D +T+VS+LPA+ ++ 
Sbjct: 298 RLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLN 357

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L+ GK VHGY +R        + +ALVD+Y KC  V TAR ++D  ++ +VV  +++I+
Sbjct: 358 GLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVIS 417

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            YV  G  E+A+++F+ +L+Q ++P  VT+   L ACA +  L  G  +H  + +     
Sbjct: 418 GYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEG 477

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
              + ++L+ MY+KC ++D +  IFSK+  K  V+WN+MI  ++QNG   EAL+ F +M 
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMC 537

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + IK ++ T+ S + A A L  I Y K IH ++I+   + ++F  +ALIDMYAKCG + 
Sbjct: 538 MEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNME 597

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F+ M +++  +WN +I  YG HGL K +V   ++M E   KP+ +TFL  ISAC+
Sbjct: 598 LALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACA 657

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLVEEG+  F  + K+Y I P M+H+  MVDL  R+GRL++A  FI  MP +P   ++
Sbjct: 658 HAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIW 717

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+L AC++H+NVEL + A+  LF+LDP   GY+VL++NI A A  WD ++KVR +M+  
Sbjct: 718 GALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDN 777

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH 730
            + K PG S V++ N  H F +    HP+S+ IYT L+ L+ E++  GYVP  +  H
Sbjct: 778 KILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLCH 834



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/478 (32%), Positives = 255/478 (53%), Gaps = 13/478 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLD---LFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LL+ C     +  G +IH + +V+G   +   L   T ++ MY    +  +A  +F  +P
Sbjct: 38  LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 201 ER---DLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSL 255
                  + WN ++ GF   G   LA+    +M  H      D  T+  ++ + A +G++
Sbjct: 98  RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G+ VH  A   G  S V V +AL+ MY+  G +  AR  FDGM  R+ V WN M+  Y
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           ++ G+   A+R+F+ M   G EP   T+   L  CA   DL  G+ +H L  +  L  +V
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           ++ N+L+SMY+KC+ +D A  +F  L    LV+WN MI G  QNG ++EAL  FC M   
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             +PDS T+VS++PAL +L+ ++  K +H  +IR+C   + F+++AL+D+Y KC  V TA
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R L+D      V   + +I GY  +G+ + A+++F  +LE   KPN +T    + AC+  
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASI 457

Query: 556 GLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
             +  G  IH +  L+  Y  +  ++   A++D+  + GRL+ +     KM ++  +T
Sbjct: 458 SALPLGQEIHGYV-LRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFSKMSLKDEVT 512


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/675 (36%), Positives = 389/675 (57%), Gaps = 4/675 (0%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  L + CG +  +  G+  H Q+     +   F    V+ MY KCG + +A K+FD M
Sbjct: 12  SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEM 71

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            ER+LVSWNTI++ +A+NG  +    + + M E   + +  T +  L ++ N   L IGK
Sbjct: 72  RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGK 131

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H +A+R+G  S  +V+TA+ +MY KCG +E A LVF+ M  +N V+W  ++  Y +  
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              +A+ +F KM+++GVE         L ACA L +L  G  +H  + +L L ++VS+  
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGT 251

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            L+  Y KC  ++ A   F  +     VSW+A+I GY Q G   EAL  F  +R++++  
Sbjct: 252 PLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDI 311

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +SFT  S+  A + L+        HA  I+S         +A+I MY++CG +  A  +F
Sbjct: 312 NSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVF 371

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           + +++     W  +I GY   G    A++LF +M +   +PN +TF+  ++ACSHSGLV 
Sbjct: 372 ESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVI 431

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG  Y  S+  +YG+   +DHY  MVD+  RAG L EA + I+ MP  P    +  +LG 
Sbjct: 432 EGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C  ++N+E+GE AA  LF+LDP++   ++L+ N+YA+   W + A VR +M ++ L+K  
Sbjct: 492 CWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKEL 551

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI--KAAGYVPDTNSIHDVEDYVQ 737
            CS + +K +VH F  G   HPQ++ IY+ LE L D +  +  G + + +  + + +  +
Sbjct: 552 SCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKE 611

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           + L+  HSE+LA+AFGL+++   + + + KNLR C DCH+  K +SL+TGREI+VRD  R
Sbjct: 612 QLLV--HSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFR 669

Query: 798 FHCFKNGVCSCGDYW 812
           FH FK G CSC DYW
Sbjct: 670 FHHFKLGECSCNDYW 684



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 233/510 (45%), Gaps = 36/510 (7%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L E C  +K L   R     + ++        +  ++ ++CK  SL+DA +VF+ + ++ 
Sbjct: 16  LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++  YA+    D        M   +  P    Y   L+   +   +  GK+IH 
Sbjct: 76  LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I +G   +    T + NMY KCG +E A  +F++M E++ V+W  I+ G+ Q      
Sbjct: 136 HAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L  +M  EG   D      +L A A +  L  G+ +HG+ ++ G +S V+V T LVD
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  +E+A   F+ +   N VSW+++I  Y + G  EEA++ F+ +  + V+  + T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
                 AC+ L D   G   H    +  L       +++I+MYS+C ++D A  +F  + 
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID 375

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
               V+W A+I GYA  G   EAL  F +M+   ++P++ T ++V+ A +   ++     
Sbjct: 376 DPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLV----- 430

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           I           N  V T  ID Y                        + M+D Y   G 
Sbjct: 431 IEGRQYLESMSSNYGVATT-IDHY------------------------DCMVDIYSRAGF 465

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            + A+EL   M   P  P+ +++ C +  C
Sbjct: 466 LQEALELIRSM---PFSPDAMSWKCLLGGC 492



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 2/229 (0%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M D G+  +  +      AC  +  L  G   H+ + +        + NS++ MY KC  
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A  +F +++ + LVSWN +I  YA+NG  ++    F  M     KP+  T +  + +
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
           L   S +   K IH+  IRS    N  V TA+ +MY KCG +  A  +F+ M+E++   W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             ++ GY        A+ LF KM+    + ++  F   + AC  +GL E
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC--AGLEE 227


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 383/659 (58%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           GL +     + L+ L+ +   LSDA  +F+ IP K   L++ ML GY K     +A+   
Sbjct: 88  GLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIF 147

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           + MR+ ++ P    +  +L VC     +  G ++HG  +  G  LD      ++ MY+KC
Sbjct: 148 LEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKC 207

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
             ++ A K+FD  P+ DLVSWN I++G+ QNG    A  L   M   G + D IT  S L
Sbjct: 208 QCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           P V  + SL+  K +HGY +R      V + +AL+D+Y KC  VE A+ +     S + V
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTV 327

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
              +MI+ YV  G  +EA+  F+ ++ + ++PT+VT      A A L  L  G  +H  +
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            + KL     + ++++ MY+KC ++D A  +F+++  K  + WN+MI   +QNGR  EA+
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           N F +M  +  + D  ++   + A A L  + Y K IH L+I+     +++  ++LIDMY
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AKCG +  +R +FD M ER+  +WN +I  YG HG  K  + LF++ML    +P+ +TFL
Sbjct: 508 AKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             ISAC H+G V+EGI Y+  + ++YGI   M+HY  + D+ GRAGRL+EA++ I  MP 
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPF 627

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
            P   V+G +LGAC IH NVEL E A+  LF+LDP   GY+VLLAN+ A A  W K+ KV
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           R+IM+++G++K PG S +E+ N  H F +    HP + +IY+ L++L+ E+K  GYVP 
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 269/529 (50%), Gaps = 11/529 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ +  SL DA  +F  +     + ++ M++G+      + A+ F ++M    V+P  Y 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           + Y++K C  +  ++ GK +H  + + G   D+F  + ++ +YA+ G + +A  +FD +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ++D V WN ++ G+ +NG +  A+ +   M     + + +T   +L   A+   L +G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG A+  G +    V+  L+ MY+KC  ++ AR +FD     ++VSWN +I+ YV+ G 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA  +F+ M+  G++P ++T    L    +L  L+    +H  + +  +  DV + ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI +Y KC+ V+ A  I  +      V    MI GY  NG+  EAL  F  +  + +KP 
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S T  S+ PA A L+ +   K +H  +I++  ++   V +A++DMYAKCG +  A  +F+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-----HS 555
            + E+    WN MI     +G    A+ LF +M    T+ + ++   A+SAC+     H 
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           G    G+     L+ D   E       +++D+  + G LN +     +M
Sbjct: 481 GKEIHGLMIKGPLRSDLYAE------SSLIDMYAKCGNLNFSRRVFDRM 523


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/626 (38%), Positives = 373/626 (59%), Gaps = 19/626 (3%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP----AVANVGSLRIGKAV 261
           SW   +   A  G    A+ L  RM          ++++ LP    + A +G   +G ++
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGR--------------VETARLVFDGMKSRNVVS 307
           H  A+R+G  +    + AL+++Y K                 +E+ R VFD M  ++VVS
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN+++    E G   EA+ + ++M   G +P + T+   L   A+  D+ RG+ +H    
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +     DV + +SLI MY+ C + D +  +F  L  +  + WN+M+ G AQNG V+EAL 
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F +M    IKP   T  S+IPA   L+ +   K +HA VIR  F+ NVF+ ++LIDMY 
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYC 320

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG V  AR +FD +    + +W  MI G+  HG  + A+ LF++M  G  KPN ITFL 
Sbjct: 321 KCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLA 380

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            ++ACSH+GLV++G  YF S+   YGI P ++H+ A+ D LGR G+L EA++FI  M I+
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIK 440

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P  +V+  +L ACK+HKN  L E+ A ++F+L+P   G H++L+N Y+++  W++ A +R
Sbjct: 441 PTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLR 500

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M KKG+QK P CS +E+KN+ H F +    HP  +RI   L    +++   GYVP+T+
Sbjct: 501 KSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTD 560

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            +  D+E+  + ++L  HSEKLAI FG++++ PG+TI + KNLRVC DCH  TK+IS + 
Sbjct: 561 DVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIV 620

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GREI++RD +RFH FK+G+CSCGD+W
Sbjct: 621 GREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 236/470 (50%), Gaps = 23/470 (4%)

Query: 122 AVSFLIRMRYDDVAP----VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           A++  +RMR  D A     V+ +    LK C  +G    G  +H   + +G   D FA  
Sbjct: 38  AIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAAN 97

Query: 178 GVVNMYAKCGQ--------------IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            ++N+Y K                 +E   K+FD MPE+D+VSWNT+V G A++G    A
Sbjct: 98  ALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEA 157

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L LV  M  +G + D  T+ S+LP  A    +R G  +HG+A R GF   V V ++L+DM
Sbjct: 158 LGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDM 217

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YA C R + +  VFD +  R+ + WNSM+A   + G+ +EA+ +F++ML  G++P  VT 
Sbjct: 218 YANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTF 277

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              + AC +L  L  G  +H  + +     +V +++SLI MY KC  V  A  IF ++Q 
Sbjct: 278 SSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS 337

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKW 462
             +VSW AMI+G+A +G   EAL  F +M   N+KP+  T ++V+ A +   ++ +  K+
Sbjct: 338 PDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKY 397

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
            +++        ++    AL D   + G +  A      M  +   + W+ ++     H 
Sbjct: 398 FNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHK 457

Query: 522 LGKAAVELFNKMLEGPTKPNDI-TFLCAISACSHSGLVEEGIHYFTSLKK 570
               A E+  K+ +   +P  + + +   +  S SG   E  H   S++K
Sbjct: 458 NTVLAEEVAKKIFD--LEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRK 505



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 197/368 (53%), Gaps = 16/368 (4%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNS--------------LSDAARVFEPIPDKLDALYH 107
           L ++SG          L++L+CK  +              L    +VF+ +P+K    ++
Sbjct: 83  LALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWN 142

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           T++ G A+     +A+  +  M  D   P  +  + +L +  +  ++RRG E+HG    N
Sbjct: 143 TLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRN 202

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GF  D+F  + +++MYA C + + + K+FD +P RD + WN+++AG AQNG  + AL L 
Sbjct: 203 GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLF 262

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            RM   G +   +T  S++PA  N+ SL +GK +H Y +R GFD  V +S++L+DMY KC
Sbjct: 263 RRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKC 322

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G V  AR +FD ++S ++VSW +MI  +   G   EA+ +F +M    ++P ++T +  L
Sbjct: 323 GNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVL 382

Query: 348 HACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
            AC+  G +++G  + + + D   +   +    +L     +  K++ A +  S ++ K  
Sbjct: 383 TACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPT 442

Query: 407 VS-WNAMI 413
            S W+ ++
Sbjct: 443 ASVWSTLL 450


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/795 (33%), Positives = 430/795 (54%), Gaps = 81/795 (10%)

Query: 88  LSDAARVFEPIPDKL-DAL-YHTMLKGYAK--FASLD-DAVSFLIRMRYD---DVAPVVY 139
           +SDA ++F+ +P ++ D++ + TM+ GY++  F S   +  S +IR   D   +  P  +
Sbjct: 90  MSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP--F 147

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE--------- 190
           ++T ++K CG +G+ R   ++H  +   GF ++      VV MY KCG ++         
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207

Query: 191 ----------------------EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
                                 +A ++F+RMPERD VSWNT+++ F+Q+GF    L +  
Sbjct: 208 ERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFV 267

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M  +G   +F+T  S+L A A+   L+ G  +H   +R      +     L+DMYAKCG
Sbjct: 268 EMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            ++ A+ VF  ++  + +SWNS+I   V  G  E+A+ +F +M    V      +   L 
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD---------------- 392
            C+       G  +H    +  +G+   + N++I+MY+KC   D                
Sbjct: 388 VCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS 447

Query: 393 ---------RAADI------FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
                    R+ DI      F  +  + +V+WN+M+  Y QNG   E L  +  MRS  +
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGV 507

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +PD  T  + I A A+L++++    +     +     NV V  +++ MY++CG +  A+ 
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKN 567

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            FD ++++ + +WN M+  +  +GLG   ++ F  ML+   KPN I+++  +S CSH GL
Sbjct: 568 TFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGL 627

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V EG HYF S+ + +GI P  +H+  MVDLLGRAG L +A D I+ MP +P  TV+ A+L
Sbjct: 628 VAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           G+C++H ++ L E AA +L ELD +    +VLL+N+Y+ +   D +A +R +M+ KG++ 
Sbjct: 688 GSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRT 747

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG-YVPDTNSIHDVEDYV 736
           + GCS +E+ N VH F    T HPQ K +Y  LE ++  I+  G Y+   +S+H  + Y 
Sbjct: 748 SRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSKKY- 806

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
                  HSEKLA AFGLLN      IH+ KNLRVC DCH   K +SLVT RE+I+RD +
Sbjct: 807 -------HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGY 859

Query: 797 RFHCFKNGVCSCGDY 811
           RFH FK+G+CSC DY
Sbjct: 860 RFHHFKDGICSCKDY 874



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 252/527 (47%), Gaps = 55/527 (10%)

Query: 59  ILPLIIKSG---LCDQHLFQTKLVSLFCKYNSL----------SDAARVFEPIPDKLDAL 105
           ++ + +K G   L +   F  +  SLFC +NS+            A ++F  +P++ +  
Sbjct: 187 VVGMYVKCGDVDLAETVFFDIERPSLFC-WNSMIYGYSQMYGPYKALQIFNRMPERDEVS 245

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++T++  +++       ++  + M     +P    Y  +L  C    +++ G  +H +++
Sbjct: 246 WNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARIL 305

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
               SLDL    G+++MYAKCG ++ A ++F  + E D +SWN+++ G    G  E AL 
Sbjct: 306 RMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALI 365

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGS----LRIGKAVHGYAMRAGFDSIVNVSTALV 281
           L  +M    RR   +    ILP +  V S       G+ +HGY +++G  S   V  A++
Sbjct: 366 LFNQM----RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAII 421

Query: 282 DMYAKCGRVETARLV-------------------------------FDGMKSRNVVSWNS 310
            MYAKCG  + A LV                               FD M  RN+V+WNS
Sbjct: 422 TMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNS 481

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           M++ YV+ G  EE ++++  M   GV+P  +T   ++ ACADL  ++ G+ V     +  
Sbjct: 482 MLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFG 541

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L  +VS+ NS+++MYS+C  +  A + F  +  K L+SWNAM+  +AQNG   + ++ F 
Sbjct: 542 LSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFE 601

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKC 489
            M     KP+  + VSV+   + + ++   K +  ++             + ++D+  + 
Sbjct: 602 DMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRA 661

Query: 490 GAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           G +  A+ L + M  + + T W+ ++     H   + A     K++E
Sbjct: 662 GLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLME 708



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 249/562 (44%), Gaps = 101/562 (17%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY----------------------- 193
            +++H QLI++G    LF +  +++MY+ CG   +A+                       
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 194 --------KMFDRMPER--DLVSWNTIVAGFAQNGFAELALDLVTRM----HEEGRRGDF 239
                   K+FD MP R  D VSW T+++G++QNGF   + +  + M    ++ G+  D 
Sbjct: 87  SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
            +  S++ A  ++G  R+   +H    + GF     +  ++V MY KCG V+ A  VF  
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK----------------------------- 330
           ++  ++  WNSMI  Y +   P +A++IF +                             
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 331 --MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
             M +QG  P  +T    L ACA   DL+ G  +H  + +++   D+   N LI MY+KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             +D A  +F  L+    +SWN++I G    G   +AL  F +MR  ++  D F + +++
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC------------------- 489
              +        + +H   I+S    +  V  A+I MYAKC                   
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446

Query: 490 ------------GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
                       G +G AR  FDMM ER++ TWN M+  Y  +G  +  ++L+  M    
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG 506

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +P+ ITF  +I AC+   +V+ G+   T   K +G+   +    ++V +  R G + EA
Sbjct: 507 VQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEA 565

Query: 598 WDFIQKMPIEPGITVFGAMLGA 619
            +    +  +  +  + AML A
Sbjct: 566 KNTFDSID-DKDLISWNAMLAA 586



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 195/461 (42%), Gaps = 80/461 (17%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           S  I + +H   + +G DS + +   L+ MY+ CG    A  VF     RN+ +WN+MI 
Sbjct: 23  SPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIR 82

Query: 314 AYVEGGNPEEAMRIFQKML-------------------------------------DQGV 336
           A V      +A ++F +M                                      D G 
Sbjct: 83  ALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
                +    + AC  LGD    I +H L+ +L  G +  + NS++ MY KC  VD A  
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202

Query: 397 IFSKLQGKTLVSWNAMILGY-------------------------------AQNGRVNEA 425
           +F  ++  +L  WN+MI GY                               +Q+G   + 
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F +M ++   P+  T  SV+ A A  S +++   +HA ++R     ++     LIDM
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDM 322

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           YAKCG +  A+ +F  + E    +WN +I G    GLG+ A+ LFN+M       ++   
Sbjct: 323 YAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFIL 382

Query: 546 LCAISACSHSGLVEEG--IHYFTSLKKDYGIE-PVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
              +  CS       G  +H +T +K   G   PV +   A++ +  + G  ++A    +
Sbjct: 383 PTILGVCSGPDYASTGELLHGYT-IKSGMGSSAPVGN---AIITMYAKCGDTDKADLVFR 438

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
            MP+   I+ + AM+ A    ++ ++G+  A   F++ P+ 
Sbjct: 439 LMPLRNTIS-WTAMITA--FSRSGDIGK--ARGYFDMMPER 474


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/708 (36%), Positives = 397/708 (56%), Gaps = 67/708 (9%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           + F    ++++YAK G++ +A+ +F  MP+RD VSW  ++ G  ++G    A+     M 
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG      T+ ++L + A + +  +G+ VH + ++ G  S V V+ +++ MY KCG  E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV--------------- 336
           TAR VF+ M+ R+V SWN M++ Y   G  E A+ +F+ M+++ +               
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 337 -----------------EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
                            EP   T+   L ACA+L  L+ G  +H  + +  +     + N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 380 SLISMYSKCKKVD---------------------------------RAADIFSKLQGKTL 406
           +LIS Y+K   V+                                 +A +IF  +  + +
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           ++W AMI+GY QNG+ +EA+  F  M     +P+S T+ +V+ A A L+ + Y K IH  
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKA 525
            IRS  E++V V  A+I +YA+ G+V  AR +FD +  R  T TW  MI     HGLG+ 
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           AV LF +M+    KP+ IT++  +SAC+H+G V++G  Y+  ++ ++GI P M HY  MV
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DL  RAG L EA +FIQ+MP+ P   V+G++L AC++ KN +L E AA +L  +DP   G
Sbjct: 760 DLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSG 819

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +  LAN+Y+A   W+  A++  + + KG++K  G S   ++ +VH F +    HPQ   
Sbjct: 820 AYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDS 879

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY     + +EIK AG+VPD NS+ HDV+D ++E LLS HSEKLAIAFGL+++   +T+ 
Sbjct: 880 IYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 939

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLRVC DCH A K+IS    REIIVRD  RFH F++G CSC DYW
Sbjct: 940 IMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 176/406 (43%), Gaps = 102/406 (25%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR----VETARLVFDGMK--SRNVVSWNSM 311
           G+A+H +A++AG      +   L+  YA  G        AR +FD +    RN  +WNS+
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287

Query: 312 IAAYVEGGN-PE------------------------------EAMRIFQKMLDQGVEPTN 340
           ++ Y + G  P+                              +A++ F  M+ +G  P+ 
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQ 347

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   L +CA +     G  VH  + +L L + V + NS++ MY KC   + A  +F +
Sbjct: 348 FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 407

Query: 401 LQ-------------------------------GKTLVSWNAMILGYAQNGRVNEALNYF 429
           +Q                                +++VSWN +I GY QNG    AL +F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467

Query: 430 CKMRS-KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
            +M S  +++PD+FT+ SV+ A A L +++  K +H+ ++R+    +  +M ALI  YAK
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAK 527

Query: 489 CGAVGT---------------------------------ARALFDMMNERHVTTWNVMID 515
            G+V T                                 AR +FD+MN R V  W  MI 
Sbjct: 528 SGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           GY  +G    A+ELF  M+    +PN  T    +SAC+    ++ G
Sbjct: 588 GYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYG 633



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 8/260 (3%)

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK--LLDQLKLGTDVSM 377
           NP     I    +  G+  +       L   A +G + RG F     L D +      + 
Sbjct: 224 NPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVG-VSRGCFREARCLFDDIPYARRNAF 282

Query: 378 T-NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           T NSL+S+Y+K  ++  A  +F+++  +  VSW  MI+G  ++GR  +A+  F  M S+ 
Sbjct: 283 TWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEG 342

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
             P  FT+ +V+ + A +      + +H  V++      V V  +++ MY KCG   TAR
Sbjct: 343 FAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETAR 402

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
           A+F+ M  R V++WNVM+  Y   G  + AV +F  M+E       +++   I+  + +G
Sbjct: 403 AVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNG 458

Query: 557 LVEEGIHYFTSLKKDYGIEP 576
           L    + +F+ +     +EP
Sbjct: 459 LDGMALKFFSRMLSASSMEP 478



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 11/314 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S++  RRI+   + + L    +  T L+  + K      A  +F+ + ++    +  M+ 
Sbjct: 530 SVETARRIMDQAVVADL--NVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    D+A+     M      P  +    +L  C  +  +  GK+IH + I +    
Sbjct: 588 GYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQ 647

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRM 230
            +     ++ +YA+ G +  A ++FD++  R + ++W +++   AQ+G  E A+ L   M
Sbjct: 648 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGR 289
              G + D IT V +L A A+ G +  GK  +       G    ++    +VD++A+ G 
Sbjct: 708 VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGL 767

Query: 290 VETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL- 347
           +  A      M  + + V W S++AA     N + A     K+L   ++P N     AL 
Sbjct: 768 LTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLS--IDPHNSGAYSALA 825

Query: 348 ---HACADLGDLER 358
               AC    D  R
Sbjct: 826 NVYSACGRWNDAAR 839


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/633 (38%), Positives = 379/633 (59%), Gaps = 25/633 (3%)

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           ++W  I+  +A +G    +L     +   G   D     S+L A        + +++H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 265 AMRAGFDSIVNVSTALVDMYAK----------------------CGRVETARLVFDGMKS 302
            +R GF   +  + AL++MY+K                        ++++ R +FD M  
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           R+VVSWN++IA   + G  EEA+ + ++M  + + P + T+   L    +  ++ +G  +
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H    +     DV + +SLI MY+KC +V+ +   F  L  +  +SWN++I G  QNGR 
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           ++ L +F +M  + +KP   +  SVIPA A L+ +   K +HA +IR  F+ N F+ ++L
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSL 341

Query: 483 IDMYAKCGAVGTARALFDM--MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +DMYAKCG +  AR +F+   M +R + +W  +I G   HG    AV LF +ML    KP
Sbjct: 342 LDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKP 401

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
             + F+  ++ACSH+GLV+EG  YF S+++D+G+ P ++HY A+ DLLGRAGRL EA+DF
Sbjct: 402 CYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I  M  EP  +V+  +L AC+ HKN+EL EK  N++  +DP   G HV+++NIY+AA  W
Sbjct: 462 ISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRW 521

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
              AK+R  M K GL+KTP CS +E+ N+VH+F +G   HP   +I   L  L+++++  
Sbjct: 522 RDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 581

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYV DTN + HDV++  + +LL +HSE+LAIAFG+++++ G+TI + KN+RVC DCH A 
Sbjct: 582 GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAI 641

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K+++ + GREIIVRD  RFH FKNG CSCGDYW
Sbjct: 642 KFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 231/452 (51%), Gaps = 26/452 (5%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++K YA    L  +++    +R   ++P  + +  LL+           + +H  +I  G
Sbjct: 47  IIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLG 106

Query: 169 FSLDLFAMTGVVNMYAK----------------------CGQIEEAYKMFDRMPERDLVS 206
           F  DL+    ++NMY+K                        +I+   K+FDRMP RD+VS
Sbjct: 107 FHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVS 166

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNT++AG AQNG  E AL++V  M +E  R D  T+ SILP      ++  GK +HGYA+
Sbjct: 167 WNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           R GFD  V + ++L+DMYAKC +VE +   F  + +R+ +SWNS+IA  V+ G  ++ + 
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
            F++ML + V+P  V+    + ACA L  L  G  +H  + +L    +  + +SL+ MY+
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346

Query: 387 KCKKVDRAADIFSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           KC  +  A  IF+K++   + +VSW A+I+G A +G   +A++ F +M    +KP     
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAF 406

Query: 445 VSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           ++V+ A +   ++    K+ +++         +    A+ D+  + G +  A      M 
Sbjct: 407 MAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 466

Query: 504 ERHV-TTWNVMIDGYGTHGLGKAAVELFNKML 534
           E    + W+ ++     H   + A ++ NK+L
Sbjct: 467 EEPTGSVWSTLLAACRAHKNIELAEKVVNKIL 498



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 166/279 (59%), Gaps = 3/279 (1%)

Query: 84  KYNSLSDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           KY+   D+ R +F+ +P +    ++T++ G A+    ++A++ +  M  +++ P  +  +
Sbjct: 144 KYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLS 203

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L +  +   + +GKEIHG  I +GF  D+F  + +++MYAKC Q+E +   F  +  R
Sbjct: 204 SILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNR 263

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D +SWN+I+AG  QNG  +  L    RM +E  +   ++  S++PA A++ +L +GK +H
Sbjct: 264 DAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLH 323

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG--MKSRNVVSWNSMIAAYVEGGN 320
            Y +R GFD    ++++L+DMYAKCG ++ AR +F+   M  R++VSW ++I      G+
Sbjct: 324 AYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGH 383

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
             +A+ +F++ML  GV+P  V  M  L AC+  G ++ G
Sbjct: 384 ALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEG 422



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 161/354 (45%), Gaps = 24/354 (6%)

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A++V     + + ++W  +I  Y   G    ++  F  +   G+ P        L A   
Sbjct: 29  AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTL 88

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK----------------------K 390
                    +H  + +L    D+   N+L++MYSK                        K
Sbjct: 89  FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVK 148

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +D    +F ++  + +VSWN +I G AQNG   EALN   +M  +N++PDSFT+ S++P 
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
             E + +   K IH   IR  F+K+VF+ ++LIDMYAKC  V  +   F +++ R   +W
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISW 268

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N +I G   +G     +  F +ML+   KP  ++F   I AC+H   +  G      + +
Sbjct: 269 NSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI-EPGITVFGAMLGACKIH 623
             G +       +++D+  + G +  A     K+ + +  +  + A++  C +H
Sbjct: 329 -LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 143/295 (48%), Gaps = 9/295 (3%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I+ G        + L+ ++ K   +  +   F  + ++    +++++ G  +    D  +
Sbjct: 226 IRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGL 285

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  RM  + V P+  +++ ++  C  +  +  GK++H  +I  GF  + F  + +++MY
Sbjct: 286 GFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMY 345

Query: 184 AKCGQIEEAYKMFDR--MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           AKCG I+ A  +F++  M +RD+VSW  I+ G A +G A  A+ L   M  +G +  ++ 
Sbjct: 346 AKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVA 405

Query: 242 IVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            +++L A ++ G +  G K  +      G    +    A+ D+  + GR+E A      M
Sbjct: 406 FMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465

Query: 301 KSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---TIMEALHACA 351
                 S W++++AA     N E A ++  K+L   V+P N+    IM  +++ A
Sbjct: 466 GEEPTGSVWSTLLAACRAHKNIELAEKVVNKIL--LVDPGNMGAHVIMSNIYSAA 518


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/669 (37%), Positives = 393/669 (58%), Gaps = 41/669 (6%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           DL +   +++ Y K G +  A  +F++MPE+D+VSWN +++GFAQNGF E A  +  +M 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            +      I+   +L A    G +   + +    M    D  +     L+  Y +  R++
Sbjct: 181 VKNE----ISWNGLLSAYVQNGRIEDARRLFDSKM----DWEIVSWNCLMGGYVRKKRLD 232

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK--------------------M 331
            AR +FD M  R+ +SWN MI  Y + G   EA R+F++                    M
Sbjct: 233 DARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGM 292

Query: 332 LDQGV-------EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           LD+         E   V+    +        +E+     +L DQ+    + S  N++++ 
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA---RELFDQMP-SRNTSSWNTMVTG 348

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y++C  +D+A  +F ++  +  +SW AMI GYAQ+G+  EAL+ F KM+      +   +
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
              + + AE++ +   K +H  ++++ F+       AL+ MY KCG++  A  +F+ + E
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + + +WN MI GY  HG GK A+ LF  M +   KP+D+T +  +SACSH+GLV++G+ Y
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEY 527

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F S+ ++YGI     HY  M+DLLGRAGRL+EA + ++ MP  P    +GA+LGA +IH 
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           + ELGEKAA ++FE++PD  G +VLL+N+YAA+  W ++ ++R+ M  KG++K PG S V
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSS 743
           E++N+ H F  G   HP+++RIY +LE L  E+K  G+V  T  + HDVE+  +E++L  
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLA+AFG+L+  PG  I + KNLRVC DCHNA K+IS +T R+IIVRD +RFH F  
Sbjct: 708 HSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 804 GVCSCGDYW 812
           G CSCGDYW
Sbjct: 768 GSCSCGDYW 776



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 160/615 (26%), Positives = 270/615 (43%), Gaps = 105/615 (17%)

Query: 1   MSSHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLE--------VCTS 52
           M +   C+ S+F  S+ ++++     T   RA   S   +      LE        V + 
Sbjct: 1   MQARGNCRFSLFIGSS-SRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSD 59

Query: 53  LKELRRILPLIIKSGLCDQHL------------FQTKLVSLFCKYNSLSDAARVFEPIPD 100
           + +  R +   ++ G C+  L                ++S +   N    A +VFE +PD
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPD 119

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++ ML GY K  +L  A +   +M   DV     ++  +L      G +   ++I
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV----SWNAMLSGFAQNGFVEEARKI 175

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK-------------------------- 194
             Q++V     +  +  G+++ Y + G+IE+A +                          
Sbjct: 176 FDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRL 231

Query: 195 -----MFDRMPERDLVSWNTIVAGFAQNG--------FAELA------------------ 223
                +FDRMP RD +SWN ++ G+AQNG        F EL                   
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNG 291

Query: 224 -LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA--- 279
            LD  TR+ EE    + ++  +++     V S +I KA      R  FD + + +T+   
Sbjct: 292 MLDEATRIFEEMPEKNEVSWNAMIAGY--VQSQQIEKA------RELFDQMPSRNTSSWN 343

Query: 280 -LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            +V  YA+CG ++ A+++FD M  R+ +SW +MI+ Y + G  EEA+ +F KM   G   
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
               +  AL +CA++  LE G  +H  L +    T     N+L++MY KC  ++ A D+F
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI- 457
             +  K +VSWN MI GYA++G   EAL  F  M+   IKPD  T+V V+ A +   ++ 
Sbjct: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVD 522

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
           +  ++ +++        N    T +ID+  + G +  A  L   M       TW  ++  
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582

Query: 517 YGTHG---LGKAAVE 528
              HG   LG+ A E
Sbjct: 583 SRIHGDTELGEKAAE 597



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 50/385 (12%)

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           + D+V WN  ++ + + G  E AL +   M    RR   +T  ++               
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAM--------------- 97

Query: 261 VHGYAMRAGFDSIVNVSTALVDM-----------YAKCGRVETARLVFDGMKSRNVVSWN 309
           + GY     FD    V   + D            Y K G +  AR +F+ M  ++VVSWN
Sbjct: 98  ISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M++ + + G  EEA +IF +ML +      ++    L A    G +E      +L D  
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIED---ARRLFDS- 209

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           K+  ++   N L+  Y + K++D A  +F ++  +  +SWN MI GYAQNG ++EA   F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            ++  +++    F   +++    +  ++  A      +     EKN     A+I  Y + 
Sbjct: 270 EELPIRDV----FAWTAMVSGFVQNGMLDEA----TRIFEEMPEKNEVSWNAMIAGYVQS 321

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             +  AR LFD M  R+ ++WN M+ GY   G    A  LF++M   P + + I++   I
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM---PQR-DCISWAAMI 377

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGI 574
           S  + SG  EE +H F  +K+D GI
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGI 402



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 25/302 (8%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++V WN  I+AY+  G  E A+ +F  M  +     N  I   L    +  D  R +F  
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL--SNNKFDCARKVF-E 115

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           K+ D+     D+   N ++S Y K   +  A  +F+++  K +VSWNAM+ G+AQNG V 
Sbjct: 116 KMPDR-----DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EA   F +M  KN      +   ++ A  +   I  A+     +  S  +  +     L+
Sbjct: 171 EARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDAR----RLFDSKMDWEIVSWNCLM 222

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
             Y +   +  AR+LFD M  R   +WN+MI GY  +GL   A  LF ++   P + +  
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL---PIR-DVF 278

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
            +   +S    +G+++E    F  + +   +      + AM+    ++ ++ +A +   +
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQ 333

Query: 604 MP 605
           MP
Sbjct: 334 MP 335



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 53/275 (19%)

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
           D   + +D+   N  IS Y +  + + A  +F+ ++ ++ V++NAMI GY  N + + A 
Sbjct: 52  DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR 111

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F KM      PD                                 +++     ++  Y
Sbjct: 112 KVFEKM------PD---------------------------------RDLISWNVMLSGY 132

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            K G +  ARALF+ M E+ V +WN M+ G+  +G  + A ++F++ML      N+I++ 
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWN 188

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             +SA   +G +E+    F S K D+ I       G  V    R  RL++A     +MP+
Sbjct: 189 GLLSAYVQNGRIEDARRLFDS-KMDWEIVSWNCLMGGYV----RKKRLDDARSLFDRMPV 243

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
              I+    + G     +N  L E  A RLFE  P
Sbjct: 244 RDKISWNIMITGYA---QNGLLSE--ARRLFEELP 273



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 6/198 (3%)

Query: 40  RHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           R   A  L  C  +  L   +++   ++K+G    ++    L++++ K  S+ +A  VFE
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            I +K    ++TM+ GYA+     +A++    M+   + P       +L  C   G + +
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGVLSACSHTGLVDK 523

Query: 157 GKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGF 214
           G E    +  N G + +    T ++++  + G+++EA  +   MP   D  +W  ++   
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 215 AQNGFAELALDLVTRMHE 232
             +G  EL      ++ E
Sbjct: 584 RIHGDTELGEKAAEKVFE 601


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/766 (36%), Positives = 406/766 (53%), Gaps = 110/766 (14%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPE------------- 201
            + +H  +I +GF    + +  ++++Y K   +  A+ +FD  R P+             
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 202 ------------------RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                             RD V +N ++ G++ N     A++L   +   G R D  T  
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 244 SILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC--------------- 287
           S+L A+A  V   +  + +H   +++G   + +V  AL+ ++ KC               
Sbjct: 154 SVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213

Query: 288 -------------------------GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
                                    G ++ AR   DGM  + VV+WN+MI+ YV  G   
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK----LGTDVSMT 378
           EA+ +F+KM   G++    T    L ACA+ G    G  VH  + + +    L   +S+ 
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA------------- 425
           N+L ++Y KC KVD A  +F+++  K LVSWNA++ GY   GR++EA             
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393

Query: 426 ------------------LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
                             L  F +M+S+  +P  +     I A A L+ + + + +HA +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +R  F+ ++    ALI MYAKCG V  A  LF  M      +WN MI   G HG G  A+
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQAL 513

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ELF  ML+    P+ ITFL  +S CSH+GLVEEG  YF S+   YGI P  DHY  M+DL
Sbjct: 514 ELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDL 573

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           L RAG+ +EA D I+ MP+EPG  ++ A+L  C+IH N++LG +AA RLFEL P   G +
Sbjct: 574 LCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTY 633

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+N+YA    WD +AKVR +M  KG++K PGCS +E++N+VH F      HP+ + +Y
Sbjct: 634 VLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVY 693

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
            +LE L  +++  GY+PDT  + HD+E   +E +LS+HSEKLA+ FGLL    G+T+ + 
Sbjct: 694 NYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVF 753

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLR+CGDCHNA K++S V  REI+VRD  RFH FKNG CSCG+YW
Sbjct: 754 KNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 259/619 (41%), Gaps = 125/619 (20%)

Query: 37  RIYRHPSALLLEVCT----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           R+    +A L + C     S    R +   +I SG   +     +L+ ++CK + L  A 
Sbjct: 11  RLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAH 70

Query: 93  RVFEPI--PD-------------------------------KLDALYHTMLKGYAKFASL 119
            +F+ I  PD                               +    Y+ M+ GY+     
Sbjct: 71  HLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDG 130

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTG 178
             A+     +  +   P  + +T +L     + E  ++ ++IH  ++ +G       +  
Sbjct: 131 FGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNA 190

Query: 179 VVNMYAKCGQ---------IEEAYKMFDRMPERDLVSWNTIVAGFAQN------------ 217
           +++++ KC           +  A K+FD M ERD +SW T++AG+ +N            
Sbjct: 191 LLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDG 250

Query: 218 -------------------GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
                              GF   AL++  +M+  G + D  T  S+L A AN G    G
Sbjct: 251 MTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHG 310

Query: 259 KAVHGYAMRA----GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           K VH Y +R       D  ++V+ AL  +Y KCG+V+ AR VF+ M  +++VSWN++++ 
Sbjct: 311 KQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSG 370

Query: 315 YVEGGN-------------------------------PEEAMRIFQKMLDQGVEPTNVTI 343
           YV  G                                 EE++++F +M  +G EP +   
Sbjct: 371 YVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAF 430

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
             A+ ACA L  L  G  +H  L +L   + +S  N+LI+MY+KC  V+ A  +F  +  
Sbjct: 431 AGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY 490

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI----RY 459
              VSWNAMI    Q+G   +AL  F  M  ++I PD  T ++V+   +   ++    RY
Sbjct: 491 LDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRY 550

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYG 518
            K +  L      E +      +ID+  + G    A+ + + M  E     W  ++ G  
Sbjct: 551 FKSMSGLYGICPGEDHY---ARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCR 607

Query: 519 THG---LG-KAAVELFNKM 533
            HG   LG +AA  LF  M
Sbjct: 608 IHGNMDLGIQAAERLFELM 626


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/706 (36%), Positives = 408/706 (57%), Gaps = 40/706 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMP 200
           LL  C  +  +R    IH Q+I  G     +A++ ++    +      +  A  +F+ + 
Sbjct: 8   LLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E +L+ WNT+  G A +     A+ L   M   G   +  T   +L + A +   + G+ 
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS------------- 307
           +HG+ ++ G++  + V T+L+ MY K GR + A  VFDG   R+VVS             
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 308 ------------------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                             WN++I+ Y + GN +EA+ +F++M+   V+P   T++  + A
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA  G ++ G  VH  +D   LG+++ + N+LI +YSKC +V+ A  +F  L  K ++SW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N MI GY       EAL  F +M      P+  TM+S++PA A+L  I + +WIH  + +
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                     + T+LIDMYAKCG +  A  +F+ M+ R ++  N MI G+  HG   AA 
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ++F++M +   +P+DITF+  +SACSHSG+++ G   F S+ ++Y I P ++HYG M+DL
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDL 484

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LG  G   EA + I  M +EP   ++ ++L ACK+H NVELGE  A +L +++P+  G +
Sbjct: 485 LGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSY 544

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIYA A  W+++A +R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY
Sbjct: 545 VLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             LE +   ++ AG+VPDT+ +  ++E+  ++  L  HSEKLAIAFGL+++ PG+ + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC +CH ATK IS +  REII RD  RFH F++GVCSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 187/599 (31%), Positives = 300/599 (50%), Gaps = 85/599 (14%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFE 96
           HPS  LL  C +L+ LR I   +IK+GL + +   ++L+  FC     ++ L  A  VFE
Sbjct: 3   HPSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLE-FCILSPNFDGLPYAISVFE 61

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            I +    +++TM +G+A  +    A+   + M    + P  Y + +LLK C  +   + 
Sbjct: 62  TIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKE 121

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ---------------------------- 188
           G++IHG ++  G+ LDL+  T +++MY K G+                            
Sbjct: 122 GQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYAS 181

Query: 189 ---IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
              IE A KMFD +P +D+VSWN I++G+A  G  + ALDL   M +   + D  T+V++
Sbjct: 182 RGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTV 241

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           + A A  GS+++G+ VH +    G  S + +  AL+D+Y+KCG VETA  +F G+ +++V
Sbjct: 242 VSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDV 301

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +SWN+MI  Y      +EA+ +FQ+ML  G  P +VT++  L ACA LG ++ G ++H  
Sbjct: 302 ISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVY 361

Query: 366 LDQLKLGTD--VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           +D+   G     S+  SLI MY+KC  ++ A  +F+ +  +TL + NAMI G+A +GR N
Sbjct: 362 IDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRAN 421

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            A + F +MR   I+PD  T V ++ A +                           + ++
Sbjct: 422 AAFDIFSRMRKNGIEPDDITFVGLLSACSH--------------------------SGML 455

Query: 484 DMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
           D+          R +F  M + +  T     +  MID  G  GL K A E+ N M     
Sbjct: 456 DL---------GRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTM---TM 503

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           +P+ + +   + AC   G VE G  +   L K   IEP     Y  + ++   AGR NE
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELGESFAQKLIK---IEPENPGSYVLLSNIYATAGRWNE 559


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 392/711 (55%), Gaps = 37/711 (5%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           AP  +   +LL      G + R + +  ++       +LF    +++  A    + +  +
Sbjct: 45  APPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMER 100

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLV-TRMHEEGRRGDFITIVSILPAVANVG 253
           +F  MPERD VS+N ++ GF+  G    ++ L    + EE  R   IT+ +++   + + 
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV------- 306
              +G +VH   +R GF +   V + LVDMYAK G +  AR VF  M+++ VV       
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 307 ------------------------SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
                                   +W +M+    + G   EA+ +F++M  +GV     T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L AC  L  LE G  +H  + +     +V + ++L+ MYSKC+ +  A  +F ++ 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + ++SW AMI+GY QN    EA+  F +M+   IKPD FT+ SVI + A L+ +     
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H L + S   + + V  AL+ +Y KCG++  A  LFD M+     +W  ++ GY   G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K  ++LF KML    KP+ +TF+  +SACS +GLVE+G  YF S++KD+GI P+ DHY 
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DL  R+GR  EA +FI++MP  P    +  +L +C++  N+E+G+ AA  L E DP 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +VLL +++AA   W ++A +R  M  + ++K PGCS ++ KN+VH F +    HP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S RIY  LE L  ++   GY PD +S+ HDV D  + +++S HSEKLAIAFGL+      
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCHNATK+IS +TGR+I+VRD  RFH F +G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 245/530 (46%), Gaps = 60/530 (11%)

Query: 70  DQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLI 127
           D +LF +  L+S       + D  R+F  +P++    Y+ ++ G++   S   +V  +  
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-- 185
            +R + V P     + ++ V   + +   G  +H Q++  GF    F  + +V+MYAK  
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 186 -----------------------------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
                                        C  IE+A  +F  M +RD ++W T+V G  Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    ALD+  RM  EG   D  T  SIL A   + +L  GK +H Y  R  ++  V V
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +ALVDMY+KC  +  A  VF  M  RN++SW +MI  Y +    EEA+R F +M   G+
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P + T+   + +CA+L  LE G   H L     L   ++++N+L+++Y KC  ++ A  
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++     VSW A++ GYAQ G+  E ++ F KM +  +KPD  T + V+ A +    
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA-- 493

Query: 457 IRYAKWIHALVIRSC-----FEKNVFVM------TALIDMYAKCGAVGTARALFDMM-NE 504
                    LV + C      +K+  ++      T +ID+Y++ G    A      M + 
Sbjct: 494 --------GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545

Query: 505 RHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
                W  ++      G   +GK A E  N +   P  P     LC++ A
Sbjct: 546 PDAFGWATLLSSCRLRGNMEIGKWAAE--NLLETDPQNPASYVLLCSMHA 593



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E ++I   I ++   D     + LV ++ K  S+  A  VF  +  +    +  M+ 
Sbjct: 293 ALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIV 352

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY + A  ++AV     M+ D + P  +    ++  C ++  +  G + H   +V+G   
Sbjct: 353 GYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMR 412

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     +V +Y KCG IE+A+++FD M   D VSW  +V G+AQ G A+  +DL  +M 
Sbjct: 413 YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKML 472

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
             G + D +T + +L A +  G +  G        +  G   I +  T ++D+Y++ GR 
Sbjct: 473 ANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRF 532

Query: 291 ETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIMEALH 348
           + A      M  S +   W +++++    GN E      + +L+   + P +  ++ ++H
Sbjct: 533 KEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMH 592

Query: 349 AC----ADLGDLERGI 360
           A      ++  L RG+
Sbjct: 593 AAKGQWTEVAHLRRGM 608


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/657 (38%), Positives = 388/657 (59%), Gaps = 38/657 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F  + E + + WNT++ G+A +     AL L   M   G   +  T   +L + A 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS---- 307
             +   G+ +HG+ ++ G++  + V T+L+ MYA+ GR+E A  VFD    R+VVS    
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 308 ---------------------------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
                                      WN+MI+ Y E G+ +EA+ +F++M+   V P  
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T++  L ACA    +E G  VH  +D    G+++ + N+LI +YSKC +V+ A  +F  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K +VSWN +I GY       EAL  F +M      P+  T+VS++PA A L  I   
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 461 KWIHALVIRSCFEKNVF----VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +WIH  + +    K+V     + T+LIDMYAKCG +  A  +F+ M  + +++WN MI G
Sbjct: 319 RWIHVYIDKKL--KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           +  HG   A  +LF++M +   +P+DITF+  +SACSHSG ++ G H F S+ +DY I P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYG M+DLLG +G   EA + I+ MP+EP   ++ ++L AC+ H N+EL E  A  L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            +++P+  G +VLL+NIYA A  WD++AKVR ++  KG++K PGCS +E+ +EVH F  G
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HP+++ IY  LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+
Sbjct: 557 DKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 616

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++ PG+ + I KNLRVC +CH ATK +S +  REII RD  RFH F++GVCSC D+W
Sbjct: 617 STKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 170/558 (30%), Positives = 278/558 (49%), Gaps = 82/558 (14%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++    A  VF  I +    +++TML+GYA  +    A+   + M    + P  Y + +L
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------ 198
           LK C        G++IHG ++  G+  DL+  T +++MYA+ G++E+A+K+FDR      
Sbjct: 73  LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132

Query: 199 -------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                                    +P +D+VSWN +++G+A+ G  + AL+L   M + 
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             R D  T+V++L A A   S+ +G+ VH +    GF S + +  AL+D+Y+KCG+VETA
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F+G+  ++VVSWN++I  Y      +EA+ +FQ+ML  G  P +VTI+  L ACA L
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312

Query: 354 GDLERGIFVHKLLD-QLKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           G ++ G ++H  +D +LK  T+  S+  SLI MY+KC  ++ A  +F+ +  K+L SWNA
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 372

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI G+A +GR N   + F +MR   I+PD  T V ++ A +                   
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSH------------------ 414

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAA 526
                             G +   R +F  M + +  T     +  MID  G  GL K A
Sbjct: 415 -----------------SGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            E+   M   P +P+ + +   + AC   G +E    +  +L K   +EP  ++ G+ V 
Sbjct: 458 KEMIKTM---PMEPDGVIWCSLLKACRRHGNLELAESFARNLMK---VEP--ENPGSYV- 508

Query: 587 LLGRAGRLNEAWDFIQKM 604
           LL         WD + K+
Sbjct: 509 LLSNIYATAGEWDEVAKV 526



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 161/295 (54%), Gaps = 2/295 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++ +    ++  A  +F+ IP K    ++ M+ GYA+  S  +A+     M   +V 
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       +L  C     +  G+++H  +  +GF  +L  +  ++++Y+KCGQ+E A  +
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +  +D+VSWNT++ G+      + AL L   M   G   + +TIVSILPA A++G++
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315

Query: 256 RIGKAVHGYAMRAGFD--SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            IG+ +H Y  +   D  +  ++ T+L+DMYAKCG +E A  VF+ M  +++ SWN+MI 
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
            +   G       +F +M   G+EP ++T +  L AC+  G L+ G  + K + Q
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 10/198 (5%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
            +T L+ ++ K   +  A +VF  +  K  + ++ M+ G+A     +       RMR + 
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEA 192
           + P    +  LL  C   G++  G+ I   +  +   +  L     ++++    G  +EA
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457

Query: 193 YKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMH--EEGRRGDFITIVSILPA- 248
            +M   MP E D V W +++    ++G  ELA      +   E    G ++ + +I    
Sbjct: 458 KEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517

Query: 249 -----VANVGSLRIGKAV 261
                VA V +L  GK +
Sbjct: 518 GEWDEVAKVRALLNGKGM 535


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 412/708 (58%), Gaps = 3/708 (0%)

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           + +L GY         +   + M   D+      +  +L     +  +  G+++H   + 
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
            G  L L     ++NMY K  +I  A  +F+ M ERDL+SWN+++AG AQ+     A+ L
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
             ++   G + D  T+ S+L A +++   L + K +H +A++    +   VSTAL+D Y+
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           +   ++ A ++F G  + ++V+WN+M++ Y +  +  + + +F  M  QG    + T+  
Sbjct: 471 RNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L  C  L  + +G  VH    +     D+ +++ ++ MY KC  +  A   F  +    
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 589

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            V+W  +I G  +NG    AL+ F +MR   + PD FT+ ++  A + L+ +   + IHA
Sbjct: 590 DVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 649

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             ++     + FV T+L+DMYAKCG++  A  LF  +   ++T WN M+ G   HG GK 
Sbjct: 650 NALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 709

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A++LF +M     KP+ +TF+  +SACSHSGLV E   Y  S+ +DYGI+P ++HY  + 
Sbjct: 710 ALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLA 769

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           D LGRAG + EA + I  M +E   +++  +L AC++  + E G++ A +L EL+P +  
Sbjct: 770 DALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 829

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +VLL+N+YAAAS WD++   RT+M+   ++K PG S +E+KN++H F      +PQ++ 
Sbjct: 830 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTEL 889

Query: 706 IYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY  ++ +I +IK  GYVP+T+ ++ DVE+  +E  L  HSEKLA+AFGLL++ P + I 
Sbjct: 890 IYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 949

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + KNLRVCGDCHNA KYIS V  REI++RD +RFH FK+G+CSCGDYW
Sbjct: 950 VIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 284/616 (46%), Gaps = 65/616 (10%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA-----SLDDAVSF 125
           +      L+S++ K  SL+ A RVF+ +P++    ++++L  YA+ +     ++ +A   
Sbjct: 80  ERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLL 139

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              +R D V       + +LK+C   G +   +  HG     G   D F    +VN+Y K
Sbjct: 140 FRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLK 199

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
            G+++E   +F+ MP RD+V WN ++  + + GF E A+DL +  H  G   + IT    
Sbjct: 200 FGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT---- 255

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
                    LR+   +      +G DS             + G+V++     D      +
Sbjct: 256 ---------LRLLSRI------SGDDS-------------EAGQVKSFENGNDASAVSEI 287

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +S N +++ Y+  G     ++ F  M++  +E   VT +  L     L  L  G  VH +
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347

Query: 366 LDQLKLGTDVSMT--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
              LKLG D+ +T  NSLI+MY K +K+  A  +F+ +  + L+SWN++I G AQ+    
Sbjct: 348 --ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV 405

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTAL 482
           EA+  F ++    +KPD +TM SV+ A + L   +  +K IH   I++    + FV TAL
Sbjct: 406 EAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTAL 465

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           ID Y++   +  A  LF   N   +  WN M+ GY     G   +ELF  M +   + +D
Sbjct: 466 IDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDD 524

Query: 543 ITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            T    +  C     + +G  +H + ++K  Y ++  +     ++D+  + G ++ A   
Sbjct: 525 FTLATVLKTCGFLFAINQGKQVHAY-AIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFA 581

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEK-------AANRLFELDPDEGGYHVLLANI 653
              +P+ P    +  ++  C     +E GE+       +  RL  + PDE      +A +
Sbjct: 582 FDSIPV-PDDVAWTTLISGC-----IENGEEERALHVFSQMRLMGVLPDE----FTIATL 631

Query: 654 YAAASMWDKLAKVRTI 669
             A+S    L + R I
Sbjct: 632 AKASSCLTALEQGRQI 647



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 269/580 (46%), Gaps = 50/580 (8%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K GL         LV+++ K+  + +   +FE +P +   L++ MLK Y +    ++A+ 
Sbjct: 180 KIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 239

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
                    + P       L ++ GD  E                               
Sbjct: 240 LSSAFHTSGLHPNEITLRLLSRISGDDSE------------------------------- 268

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
             GQ++      D     +++S N I++G+   G     L     M E     D +T + 
Sbjct: 269 -AGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFIL 327

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L     + SL +G+ VH  A++ G D ++ VS +L++MY K  ++  AR VF+ M  R+
Sbjct: 328 VLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERD 387

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD---LERGIF 361
           ++SWNS+IA   +     EA+ +F ++L  G++P + T+   L A + L +   L + I 
Sbjct: 388 LISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIH 447

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH +  +     D  ++ +LI  YS+ + +  A  +F +     LV+WNAM+ GY Q+  
Sbjct: 448 VHAI--KTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHD 504

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
            ++ L  F  M  +  + D FT+ +V+     L  I   K +HA  I+S ++ +++V + 
Sbjct: 505 GHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 564

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           ++DMY KCG +  A+  FD +       W  +I G   +G  + A+ +F++M      P+
Sbjct: 565 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPD 624

Query: 542 DITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           + T      A S    +E+G  IH   +LK +   +P +    ++VD+  + G +++A+ 
Sbjct: 625 EFTIATLAKASSCLTALEQGRQIHA-NALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYC 681

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGE-KAANRLFE 638
             +++ +   IT + AML     H     GE K A +LF+
Sbjct: 682 LFKRIEMM-NITAWNAMLVGLAQH-----GEGKEALQLFK 715



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 194/402 (48%), Gaps = 37/402 (9%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK  H +++    + + F +  +++MY+KCG +  A ++FD+MPERDLVSWN+I+A +AQ
Sbjct: 65  GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124

Query: 217 N--GFAE---LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +  G  E    A  L   + ++      +T+  +L    + G +   ++ HGYA + G D
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
               V+ ALV++Y K G+V+  R++F+ M  R+VV WN M+ AY+E G  EEA+ +    
Sbjct: 185 GDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              G+ P  +T+        D  D E G      +   + G D S  + +IS        
Sbjct: 245 HTSGLHPNEITLRLLSRISGD--DSEAG-----QVKSFENGNDASAVSEIISR------- 290

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
                             N ++ GY   G+ +  L  F  M   +++ D  T + V+   
Sbjct: 291 ------------------NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATA 332

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
             L  +   + +H + ++   +  + V  +LI+MY K   +G AR +F+ M+ER + +WN
Sbjct: 333 VRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWN 392

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            +I G     L   AV LF ++L    KP+  T    + A S
Sbjct: 393 SVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 6/318 (1%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C    ++ + +++    IKSG        + ++ ++ K   +S A   F+ IP 
Sbjct: 528 ATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 587

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
             D  + T++ G  +    + A+    +MR   V P  +    L K    +  + +G++I
Sbjct: 588 PDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 647

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +    + D F  T +V+MYAKCG I++AY +F R+   ++ +WN ++ G AQ+G  
Sbjct: 648 HANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 707

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTA 279
           + AL L  +M   G + D +T + +L A ++ G +    K +       G    +   + 
Sbjct: 708 KEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSC 767

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD-QGVE 337
           L D   + G V+ A  + D M      S + +++AA    G+ E   R+  K+L+ + ++
Sbjct: 768 LADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 827

Query: 338 PTNVTIMEALHACADLGD 355
            +   ++  ++A A   D
Sbjct: 828 SSAYVLLSNMYAAASKWD 845



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 11/166 (6%)

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K  HA ++        F++  LI MY+KCG++  AR +FD M ER + +WN ++  Y   
Sbjct: 66  KCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQS 125

Query: 521 GLG-----KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKKDYG 573
             G     K A  LF  + +     + +T    +  C HSG V   E  H +       G
Sbjct: 126 SEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYAC---KIG 182

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           ++      GA+V++  + G++ E     ++MP    + ++  ML A
Sbjct: 183 LDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/741 (34%), Positives = 407/741 (54%), Gaps = 6/741 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
           ++S   K   +S A  +F+ +PD+    +  ++  YA+ +  D+A     +M        
Sbjct: 85  MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAY 193
           P    +T LL  C D        ++H   +  GF  + F      ++  Y +  +++ A 
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +F+ +PE+D V++NT++ G+ ++G    ++ L  +M + G +    T   +L AV  + 
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
              +G+ +H  ++  GF    +V   ++D Y+K  RV   R++FD M   + VS+N +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           +Y +    E ++  F++M   G +  N      L   A+L  L+ G  +H         +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            + + NSL+ MY+KC+  + A  IF  L  +T VSW A+I GY Q G     L  F KMR
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
             N++ D  T  +V+ A A  + +   K +HA +IRS   +NVF  + L+DMYAKCG++ 
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F+ M +R+  +WN +I  +  +G G+AA+  F KM+E   +P+ ++ L  ++ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H G VE+G  YF ++   YGI P   HY  M+DLLGR GR  EA   + +MP EP   ++
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
            ++L AC+IHKN  L E+AA +LF ++   +   +V ++NIYAAA  W+K+  V+  M +
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHD 731
           +G++K P  S VE+ +++H F S    HP    I   +  L  EI+  GY PDT+S + D
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           V++ ++   L  HSE+LA+AF L+++  G  I + KNLR C DCH A K IS +  REI 
Sbjct: 745 VDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD  RFH F  GVCSCGDYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 237/524 (45%), Gaps = 43/524 (8%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +  ++I  GF  D      +V    + GQ+  A K++D MP ++ VS NT+++G  + 
Sbjct: 33  RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92

Query: 218 GFAELALDLVTRMHEE------------GRRGDF---------------------ITIVS 244
           G    A DL   M +              R   F                     +T  +
Sbjct: 93  GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDS--IVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +LP   +         VH +A++ GFD+   + VS  L+  Y +  R++ A ++F+ +  
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++ V++N++I  Y + G   E++ +F KM   G +P++ T    L A   L D   G  +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H L        D S+ N ++  YSK  +V     +F ++     VS+N +I  Y+Q  + 
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
             +L++F +M+       +F   +++   A LS ++  + +H   + +  +  + V  +L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           +DMYAKC     A  +F  + +R   +W  +I GY   GL  A ++LF KM     + + 
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452

Query: 543 ITFLCAISACSH--SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            TF   + A +   S L+ + +H F  + +   +E V    G +VD+  + G + +A   
Sbjct: 453 STFATVLKASASFASLLLGKQLHAF--IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQV 509

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPD 642
            ++MP    ++ + A++ A   + + E    A  ++ E  L PD
Sbjct: 510 FEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPD 552



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 96/221 (43%), Gaps = 8/221 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+   S   L   +++   II+SG  +     + LV ++ K  S+ DA +VFE +PD
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE- 159
           +    ++ ++  +A     + A+    +M    + P   +   +L  C   G + +G E 
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG---FA 215
                 + G +        ++++  + G+  EA K+ D MP E D + W++++       
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
               AE A + +  M +      ++++ +I  A      +R
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/629 (39%), Positives = 380/629 (60%), Gaps = 3/629 (0%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G +  A K+F +M   D    NT++ G+A++     A+ L   M E G   D  T   +L
Sbjct: 59  GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A +G++++G+  H   ++ GF S + V  AL+  Y  CG    A  VFD    R+VV
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           +WN MI A++  G  E+A  +  +M     + P  VT++  + ACA LG+LERG F+H  
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSY 238

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +L L  ++ + N+++ MY KC  ++ A ++F++++ K ++SW +M+ G A++G   EA
Sbjct: 239 SKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEA 298

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F KM+   I+ D  T+V V+ A A+   +   K+IH L+ +     ++ + TAL+DM
Sbjct: 299 LALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDM 358

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           YAKCG++  A  +F  M  R+V TWN +I G   HG G+ A+ LF++M      P+D+TF
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  + ACSH+GLV+EG+  F ++K  + IEP M+HYG +VDLL RA ++++A  FI+ MP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I+    ++  +LGAC+   + +L EK   R+ EL+PD  G +V+L+N+YA  S WD   K
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA-AGYVP 724
           +R  M+ KG++KTPGCS +EL   +H F +G   H Q+++IY  +E +   +    G+VP
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 598

Query: 725 DT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
            T N + D+E+  +E+ L  HSEKLAIA GL+++  GS I I KNLRVC DCH+  K  S
Sbjct: 599 GTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTS 658

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            V  REI+ RD  RFH FK G CSC D+W
Sbjct: 659 KVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 238/411 (57%), Gaps = 3/411 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS--LSDAARVFEPIPDKLDALYH 107
           CTS+ + ++   L++++ L    LF +KL+S     +S  L+ A ++F  + +    + +
Sbjct: 21  CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           TM++GYA+  +  +AVS    M    V    Y Y ++L  C  +G ++ G+  H +++ N
Sbjct: 81  TMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKN 140

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GF  DLF +  ++  Y  CG    A  +FD    RD+V+WN ++      G +E A DL+
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200

Query: 228 TRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             M + +  R D +T+VS++PA A +G+L  GK +H Y+   G D  + V+ A++DMY K
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           C  +E+A+ VF+ ++ ++V+SW SM++   + G  +EA+ +FQKM    +E   +T++  
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L ACA  G L++G ++H L+D+ ++  D+ +  +L+ MY+KC  +D A  +F +++ + +
Sbjct: 321 LSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV 380

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
            +WNA+I G A +G   +A++ F +M    + PD  T ++++ A +   ++
Sbjct: 381 FTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLV 431



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 213/444 (47%), Gaps = 18/444 (4%)

Query: 34  IPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           +P   Y +P   +L  C  L  +   RR    ++K+G          L+  +    S   
Sbjct: 107 VPVDNYTYP--FVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGC 164

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCG 149
           A  VF+    +    ++ M+  +      + A   L  M + D++ P       L+  C 
Sbjct: 165 ACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            +G + RGK +H      G   +L     +++MY KC  IE A ++F+R+ E+D++SW +
Sbjct: 225 QLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTS 284

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +++G A++G+ + AL L  +M       D IT+V +L A A  G+L  GK +H    +  
Sbjct: 285 MLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFE 344

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            +  + + TALVDMYAKCG ++ A  VF  M+ RNV +WN++I      G+ E+A+ +F 
Sbjct: 345 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFD 404

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMYSKC 388
           +M    + P +VT +  L AC+  G ++ G+ + + + ++ ++   +     ++ +  + 
Sbjct: 405 QMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 464

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS---FTMV 445
           +KVD A      +  K      A +LG  ++G   +      + R   ++PDS   + M+
Sbjct: 465 RKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGR-RVIELEPDSCGRYVML 523

Query: 446 SVIPALAELSVIRYAKWIHALVIR 469
           S + A         ++W HAL +R
Sbjct: 524 SNLYA-------GVSQWDHALKLR 540


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/657 (39%), Positives = 387/657 (58%), Gaps = 8/657 (1%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD--LVSWNTIVAGFAQ 216
            +H  L+V+  S +LF    +   YA+ G ++ A       P     + +WN ++A  ++
Sbjct: 33  RLHALLVVSS-SQNLF--PSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSR 89

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G    AL  V R      R D  T    L A A +G L   +AV   A  AG+   V V
Sbjct: 90  AGSPGAALR-VFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFV 148

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +AL+ +Y++CG +  A  VFDGM  ++ V+W++M+A +V  G P EA+ ++ +M + GV
Sbjct: 149 CSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGV 208

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
               V ++  + AC   G+   G  VH    +  +  DV +  SL+ MY+K    D A  
Sbjct: 209 AEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQ 268

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +  +  VSWNA+I G+AQNG  +EAL+ F +M +  ++PDS  +VS + A A++  
Sbjct: 269 VFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGF 328

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           ++  K IH  ++R   E    + TA++DMY+KCG++ +AR LF+ ++ R +  WN MI  
Sbjct: 329 LKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIAC 387

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
            GTHG G  A+ LF ++ E   KP+  TF   +SA SHSGLVEEG  +F  +  ++GIEP
Sbjct: 388 CGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEP 447

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
              H   +VDLL R+G + EA + +  M  EP I ++ A+L  C  +K +ELGE  A ++
Sbjct: 448 TEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKI 507

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            E  P++ G   L++N+YAAA  WDK+ ++R +M+  G +K PG SL+E+    H+F   
Sbjct: 508 LESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVME 567

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQ + I   +  L  E++  GYVP T  + HD+++ V+E LLS HSE+LAIAFGLL
Sbjct: 568 DQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLL 627

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           N+SPG+ + I KNLRVCGDCH+A KYIS +  REI+VRD  RFH FK+G CSCGDYW
Sbjct: 628 NTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 270/531 (50%), Gaps = 11/531 (2%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHT 108
           T++  L R+  L++ S    Q+LF + L + + +  +L  A       P     +  ++ 
Sbjct: 26  TTVAALTRLHALLVVSS--SQNLFPS-LAAAYARVGALDAAESTLAASPSSRSCIPAWNA 82

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L   ++  S   A+  + R       P    +T  L  C  +G++   + +  +    G
Sbjct: 83  LLAARSRAGSPGAALR-VFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAG 141

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +  D+F  + ++++Y++CG + +A ++FD MP +D V+W+T+VAGF   G    AL + +
Sbjct: 142 YGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYS 201

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           RM E G   D + +V ++ A    G+ R+G +VHG  +R G    V ++T+LVDMYAK G
Sbjct: 202 RMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNG 261

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
             + AR VF  M  RN VSWN++I+ + + G+ +EA+ +F++M   G++P +  ++ AL 
Sbjct: 262 HFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALL 321

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACAD+G L+ G  +H  + + +L     +  +++ MYSKC  ++ A  +F+KL  + LV 
Sbjct: 322 ACADVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVL 380

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALV 467
           WNAMI     +G  ++AL  F ++    IKPD  T  S++ AL+   ++   K W   ++
Sbjct: 381 WNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMI 440

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAA 526
                E        ++D+ A+ G V  A  +   M  E  +  W  ++ G   +   +  
Sbjct: 441 TEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELG 500

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +  K+LE  ++P DI  L  +S    +    + +     L KD G + V
Sbjct: 501 ETIAKKILE--SQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKV 549


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/788 (33%), Positives = 443/788 (56%), Gaps = 14/788 (1%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           +P  +   P+  LL+ C  L+++R    +  L++K G          LVS++ K + LS 
Sbjct: 178 VPLGLSSFPA--LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 91  AARVFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           A R+F+   +K DA L++++L  Y+      + +     M     AP  Y     L  C 
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 150 DVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
                + GKEIH  ++ +   S +L+    ++ MY +CG++ +A ++  +M   D+V+WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++ G+ QN   + AL+  + M   G + D +++ SI+ A   + +L  G  +H Y ++ 
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G+DS + V   L+DMY+KC         F  M  ++++SW ++IA Y +     EA+ +F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDL--ERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           + +  + +E   + +   L A + L  +   + I  H L   L    D  + N L+ +Y 
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVIQNELVDVYG 532

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC+ +  A  +F  ++GK +VSW +MI   A NG  +EA+  F +M    +  DS  ++ 
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           ++ A A LS +   + IH  ++R  F     +  A++DMYA CG + +A+A+FD +  + 
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           +  +  MI+ YG HG GKAAVELF+KM      P+ I+FL  + ACSH+GL++EG  +  
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
            ++ +Y +EP  +HY  +VD+LGRA  + EA++F++ M  EP   V+ A+L AC+ H   
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           E+GE AA RL EL+P   G  VL++N++A    W+ + KVR  M+  G++K PGCS +E+
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSH 744
             +VH F +    HP+SK IY  L  +  ++ +  GYV DT  + H+V++  +  +L  H
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGH 892

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SE++AIA+GLL +   + + I KNLRVC DCH   K +S +  R+I++RD +RFH F++G
Sbjct: 893 SERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESG 952

Query: 805 VCSCGDYW 812
           +CSCGD W
Sbjct: 953 LCSCGDSW 960



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 228/431 (52%), Gaps = 5/431 (1%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMF 196
           V  + Y+L++CG    + +G+++H ++     S +L  + G +V MY KCG +++A K+F
Sbjct: 80  VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVF 139

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D MP+R   +WNT++  +  NG    AL L   M  EG      +  ++L A A +  +R
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAY 315
            G  +H   ++ G+ S   +  ALV MYAK   +  AR +FDG + + + V WNS++++Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH-KLLDQLKLGTD 374
              G   E + +F++M   G  P + TI+ AL AC      + G  +H  +L      ++
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + + N+LI+MY++C K+ +A  I  ++    +V+WN++I GY QN    EAL +F  M +
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
              K D  +M S+I A   LS +     +HA VI+  ++ N+ V   LIDMY+KC     
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS- 553
               F  M+++ + +W  +I GY  +     A+ELF  + +   + +++     + A S 
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499

Query: 554 -HSGLVEEGIH 563
             S L+ + IH
Sbjct: 500 LKSMLIVKEIH 510


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/766 (34%), Positives = 414/766 (54%), Gaps = 81/766 (10%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
            K +S   +      A RVF  +P +    Y+ M+ GY + A    A     +M      
Sbjct: 50  NKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP----- 104

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                                               DLF+   ++  Y +  ++ EA+K+
Sbjct: 105 ----------------------------------ERDLFSWNVMLTGYVRNRRLGEAHKL 130

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP++D+VSWN +++G+AQNGF + A ++  +M       + I+   +L A  + G L
Sbjct: 131 FDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRL 186

Query: 256 RIGKAVHGYAMRAGFDSIVNVS----TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +  + +        F+S  N        L+  Y K   +  AR +FD M  R+V+SWN+M
Sbjct: 187 KEARRL--------FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTM 238

Query: 312 IAAYVEGGNPEEAMRIFQK--------------------MLDQGVEPTN-VTIMEALHAC 350
           I+ Y + G+  +A R+F +                    M+D+  +  + + +   +   
Sbjct: 239 ISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYN 298

Query: 351 ADLG---DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           A L      ++ +   +L + +    ++S  N++I+ Y +   + +A  +F  +  +  V
Sbjct: 299 AMLAGYVQYKKMVIAGELFEAMPC-RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV 357

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SW A+I GYAQNG   EALN F +M+      +  T    +   A+++ +   K +H  V
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +++ FE   FV  AL+ MY KCG+   A  +F+ + E+ V +WN MI GY  HG G+ A+
Sbjct: 418 VKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQAL 477

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF  M +   KP++IT +  +SACSHSGL++ G  YF S+ +DY ++P   HY  M+DL
Sbjct: 478 VLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDL 537

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAGRL EA + ++ MP +PG   +GA+LGA +IH N ELGEKAA  +F+++P   G +
Sbjct: 538 LGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMY 597

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+N+YAA+  W  + K+R+ M + G+QK  G S VE++N++H+F  G   HP+  RIY
Sbjct: 598 VLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIY 657

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
            FLE L  +++  GYV  T  + HDVE+  +E++L  HSEKLA+AFG+L    G  I + 
Sbjct: 658 AFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVM 717

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC DCHNA K+IS + GR II+RD HRFH F  G+CSCGDYW
Sbjct: 718 KNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 216/458 (47%), Gaps = 38/458 (8%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+      ++ + + G  + A ++F+ MP R  VS+N +++G+ +N    LA DL  +M 
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E     D  +   +L     V + R+G+A   + +    D +     A++  YA+ G V+
Sbjct: 105 ER----DLFSWNVMLTGY--VRNRRLGEAHKLFDLMPKKDVV--SWNAMLSGYAQNGFVD 156

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR VF+ M  RN +SWN ++AAYV  G  +EA R+F+   +  +   N         C 
Sbjct: 157 EAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWN---------CL 207

Query: 352 DLGDLERGIF--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
             G ++R +     +L D++ +  DV   N++IS Y++   + +A  +F++   + + +W
Sbjct: 208 MGGYVKRNMLGDARQLFDRMPV-RDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTW 266

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
            AM+ GY QNG V+EA  YF +M  KN        +S    LA      Y ++   ++  
Sbjct: 267 TAMVSGYVQNGMVDEARKYFDEMPVKN-------EISYNAMLAG-----YVQYKKMVIAG 314

Query: 470 SCFE----KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             FE    +N+     +I  Y + G +  AR LFDMM +R   +W  +I GY  +G  + 
Sbjct: 315 ELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEE 374

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ +F +M       N  TF CA+S C+    +E G      + K  G E       A++
Sbjct: 375 ALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKA-GFETGCFVGNALL 433

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            +  + G  +EA D  + +  E  +  +  M+     H
Sbjct: 434 GMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAGYARH 470



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           K  ++V+WN  I++++  G+ + A+R+F  M  +     N  I          G L    
Sbjct: 42  KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMIS---------GYLRNAK 92

Query: 361 F--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           F     L D++    D+   N +++ Y + +++  A  +F  +  K +VSWNAM+ GYAQ
Sbjct: 93  FSLARDLFDKMP-ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQ 151

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           NG V+EA   F KM  +N    S +   ++ A      ++ A+     +  S     +  
Sbjct: 152 NGFVDEAREVFNKMPHRN----SISWNGLLAAYVHNGRLKEAR----RLFESQSNWELIS 203

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
              L+  Y K   +G AR LFD M  R V +WN MI GY   G    A  LFN   E P 
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN---ESPI 260

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH--YGAMVDLLGRAGRLNE 596
           + +  T+   +S    +G+V+E   YF  +       PV +   Y AM+    +  ++  
Sbjct: 261 R-DVFTWTAMVSGYVQNGMVDEARKYFDEM-------PVKNEISYNAMLAGYVQYKKMVI 312

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           A +  + MP    I+ +  M+     +     G   A +LF++ P
Sbjct: 313 AGELFEAMPCR-NISSWNTMITGYGQNG----GIAQARKLFDMMP 352



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 14/169 (8%)

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIR 458
           K +   +V+WN  I  + +NG  + AL  F  M R  ++  ++  M+S     A+ S+ R
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNA--MISGYLRNAKFSLAR 97

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
                   +     E+++F    ++  Y +   +G A  LFD+M ++ V +WN M+ GY 
Sbjct: 98  -------DLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYA 150

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +G    A E+FNKM   P + N I++   ++A  H+G ++E    F S
Sbjct: 151 QNGFVDEAREVFNKM---PHR-NSISWNGLLAAYVHNGRLKEARRLFES 195



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 26/228 (11%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C  +  L   +++   ++K+G          L+ ++ K  S  +A  VFE I +K  
Sbjct: 398 LSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDV 457

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++TM+ GYA+      A+     M+   V P       +L  C   G I RG E    
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYF-- 515

Query: 164 LIVNGFSLDL--------FAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGF 214
                +S+D            T ++++  + G++EEA  +   MP +    SW  ++   
Sbjct: 516 -----YSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGAS 570

Query: 215 AQNGFAEL---ALDLVTRMHEEGRRGDFITIVSILPAVA---NVGSLR 256
             +G  EL   A ++V +M E    G ++ + ++  A     +VG +R
Sbjct: 571 RIHGNTELGEKAAEMVFKM-EPQNSGMYVLLSNLYAASGRWVDVGKMR 617


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/669 (37%), Positives = 392/669 (58%), Gaps = 41/669 (6%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           DL +   +++ Y K G +  A  +F++MPE+D+VSWN +++GFAQNGF E A  +  +M 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML 180

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            +      I+   +L A    G +   + +    M    D  +     L+  Y +  R++
Sbjct: 181 VKNE----ISWNGLLSAYVQNGRIEDARRLFDSKM----DWEIVSWNCLMGGYVRKKRLD 232

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK--------------------M 331
            AR +FD M  R+ +SWN MI  Y + G   EA R+F++                    M
Sbjct: 233 DARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGM 292

Query: 332 LDQGV-------EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           LD+         E   V+    +        +E+     +L DQ+    + S  N++++ 
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA---RELFDQMP-SRNTSSWNTMVTG 348

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y++C  +D+A  +F ++  +  +SW AMI GYAQ+G+  EAL+ F KM+      +   +
Sbjct: 349 YAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
              + + AE++ +   K +H  ++++ F+       AL+ MY KCG++  A  +F+ + E
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + + +WN MI GY  HG GK A+ LF  M +   KP+D+T +  +SACSH+G V++G+ Y
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEY 527

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F S+ ++YGI     HY  M+DLLGRAGRL+EA + ++ MP  P    +GA+LGA +IH 
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           + ELGEKAA ++FE++PD  G +VLL+N+YAA+  W ++ ++R+ M  KG++K PG S V
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSS 743
           E++N+ H F  G   HP+++RIY +LE L  E+K  G+V  T  + HDVE+  +E++L  
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLA+AFG+L+  PG  I + KNLRVC DCHNA K+IS +T R+IIVRD +RFH F  
Sbjct: 708 HSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 804 GVCSCGDYW 812
           G CSCGDYW
Sbjct: 768 GSCSCGDYW 776



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 160/615 (26%), Positives = 269/615 (43%), Gaps = 105/615 (17%)

Query: 1   MSSHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLE--------VCTS 52
           M +   C+ S+F  S+ ++++     T   RA   S   +      LE        V + 
Sbjct: 1   MQARGNCRFSLFIGSS-SRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSD 59

Query: 53  LKELRRILPLIIKSGLCDQHL------------FQTKLVSLFCKYNSLSDAARVFEPIPD 100
           + +  R +   ++ G C+  L                ++S +   N    A +VFE +PD
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPD 119

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++ ML GY K  +L  A +   +M   DV     ++  +L      G +   ++I
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV----SWNAMLSGFAQNGFVEEARKI 175

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK-------------------------- 194
             Q++V     +  +  G+++ Y + G+IE+A +                          
Sbjct: 176 FDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRL 231

Query: 195 -----MFDRMPERDLVSWNTIVAGFAQNG--------FAELA------------------ 223
                +FDRMP RD +SWN ++ G+AQNG        F EL                   
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNG 291

Query: 224 -LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA--- 279
            LD  TR+ EE    + ++  +++     V S +I KA      R  FD + + +T+   
Sbjct: 292 MLDEATRIFEEMPEKNEVSWNAMIAGY--VQSQQIEKA------RELFDQMPSRNTSSWN 343

Query: 280 -LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
            +V  YA+CG ++ A+++FD M  R+ +SW +MI+ Y + G  EEA+ +F KM   G   
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
               +  AL +CA++  LE G  +H  L +    T     N+L++MY KC  ++ A D+F
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI- 457
             +  K +VSWN MI GYA++G   EAL  F  M+   IKPD  T+V V+ A +    + 
Sbjct: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVD 522

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
           +  ++ +++        N    T +ID+  + G +  A  L   M       TW  ++  
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582

Query: 517 YGTHG---LGKAAVE 528
              HG   LG+ A E
Sbjct: 583 SRIHGDTELGEKAAE 597



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 50/385 (12%)

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           + D+V WN  ++ + + G  E AL +   M    RR   +T  ++               
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGM----RRRSTVTYNAM--------------- 97

Query: 261 VHGYAMRAGFDSIVNVSTALVDM-----------YAKCGRVETARLVFDGMKSRNVVSWN 309
           + GY     FD    V   + D            Y K G +  AR +F+ M  ++VVSWN
Sbjct: 98  ISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M++ + + G  EEA +IF +ML +      ++    L A    G +E      +L D  
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIED---ARRLFDS- 209

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           K+  ++   N L+  Y + K++D A  +F ++  +  +SWN MI GYAQNG ++EA   F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            ++  +++    F   +++    +  ++  A      +     EKN     A+I  Y + 
Sbjct: 270 EELPIRDV----FAWTAMVSGFVQNGMLDEA----TRIFEEMPEKNEVSWNAMIAGYVQS 321

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             +  AR LFD M  R+ ++WN M+ GY   G    A  LF++M   P + + I++   I
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEM---PQR-DCISWAAMI 377

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGI 574
           S  + SG  EE +H F  +K+D GI
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGI 402



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 25/302 (8%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++V WN  I+AY+  G  E A+ +F  M  +     N  I   L    +  D  R +F  
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL--SNNKFDCARKVF-E 115

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           K+ D+     D+   N ++S Y K   +  A  +F+++  K +VSWNAM+ G+AQNG V 
Sbjct: 116 KMPDR-----DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EA   F +M  KN      +   ++ A  +   I  A+     +  S  +  +     L+
Sbjct: 171 EARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDAR----RLFDSKMDWEIVSWNCLM 222

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
             Y +   +  AR+LFD M  R   +WN+MI GY  +GL   A  LF ++   P + +  
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL---PIR-DVF 278

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
            +   +S    +G+++E    F  + +   +      + AM+    ++ ++ +A +   +
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQ 333

Query: 604 MP 605
           MP
Sbjct: 334 MP 335



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 53/275 (19%)

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
           D   + +D+   N  IS Y +  + + A  +F+ ++ ++ V++NAMI GY  N + + A 
Sbjct: 52  DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR 111

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F KM      PD                                 +++     ++  Y
Sbjct: 112 KVFEKM------PD---------------------------------RDLISWNVMLSGY 132

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            K G +  ARALF+ M E+ V +WN M+ G+  +G  + A ++F++ML      N+I++ 
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWN 188

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             +SA   +G +E+    F S K D+ I       G  V    R  RL++A     +MP+
Sbjct: 189 GLLSAYVQNGRIEDARRLFDS-KMDWEIVSWNCLMGGYV----RKKRLDDARSLFDRMPV 243

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
              I+    + G     +N  L E  A RLFE  P
Sbjct: 244 RDKISWNIMITGYA---QNGLLSE--ARRLFEELP 273



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 6/198 (3%)

Query: 40  RHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           R   A  L  C  +  L   +++   ++K+G    ++    L++++ K  S+ +A  VFE
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            I +K    ++TM+ GYA+     +A++    M+   + P       +L  C   G + +
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGVLSACSHTGFVDK 523

Query: 157 GKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGF 214
           G E    +  N G + +    T ++++  + G+++EA  +   MP   D  +W  ++   
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 215 AQNGFAELALDLVTRMHE 232
             +G  EL      ++ E
Sbjct: 584 RIHGDTELGEKAAEKVFE 601


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/702 (37%), Positives = 399/702 (56%), Gaps = 40/702 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE---AYKMFDRMP 200
           LL  C  +  +R    IH ++I  G     +A++ ++         +    A  +FD + 
Sbjct: 8   LLHNCKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ 64

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E +L+ WNT+  G A +     AL L   M   G   +  T   +L A A   + R G+ 
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS------------- 307
           +HG+ ++ G D  + V T+L+ MY K GR E AR VFD    R+VVS             
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 308 ------------------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                             WN++I+ Y E GN +EA+ +F++M+   V+P   T++  L A
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA    +E G  VH  +D    G+++ + N+LI +Y KC +V+ A+ +F  L  K ++SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N +I GY       EAL  F +M      P+  TM+S++PA A L  I   +WIH  + +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364

Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                     + T+LIDMYAKCG +  A+ +FD M  R +++WN MI G+  HG    A 
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           ++F++M +   +P+DITF+  +SACSHSG+++ G H F S+ +DY I P ++HYG M+DL
Sbjct: 425 DIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDL 484

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LG +G   EA + I  M ++P   ++ ++L ACK+H NVELGE  A  L +++P   G +
Sbjct: 485 LGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSY 544

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIYA A  W+++AK R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY
Sbjct: 545 VLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           KNLRVC +CH ATK IS +  REII RD  RFH F +GVCSC
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 292/598 (48%), Gaps = 83/598 (13%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVS---LFCKYNSLSDAARVFEP 97
           HPS  LL  C +L+ LR I   +IK+GL + +   +KL+    L   ++ L+ A  VF+ 
Sbjct: 3   HPSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           I +    +++TM +G+A  +    A+   + M    + P  Y + +LLK C      R G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE-------------------------- 191
           ++IHG ++  G  LDL+  T ++ MY K G+ E+                          
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182

Query: 192 -----AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
                A KMFD +P +D+VSWN +++G+A+ G  + AL+L   M +   + D  T+V++L
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A   S+ +G+ VH +    GF S + +  AL+D+Y KCG VETA  +F+G+  ++V+
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SWN++I  Y      +EA+ +FQ+ML  G  P  VT++  L ACA LG ++ G ++H  +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYI 362

Query: 367 DQLKLGTD--VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           D+   G     S+  SLI MY+KC  ++ A  +F  +  ++L SWNAMI G+A +GR N 
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANP 422

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A + F +MR   I+PD  T V ++ A +                                
Sbjct: 423 AFDIFSRMRKDGIEPDDITFVGLLSACSH------------------------------- 451

Query: 485 MYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
                G +   R +F  M E +  T     +  MID  G  GL K A E+ N M      
Sbjct: 452 ----SGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSM---EMD 504

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           P+ + +   + AC   G VE G  +  +L K   IEP     Y  + ++   AGR NE
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESFAQNLIK---IEPKNSGSYVLLSNIYATAGRWNE 559


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/769 (33%), Positives = 425/769 (55%), Gaps = 44/769 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +V+ +C    + DA  +F+ +P +    +  M+ GY +             M ++  +P 
Sbjct: 163 MVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPD 222

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-CGQIEEAYKMF 196
             N+  +L     + ++   + +   ++  GF  D+   T ++N+Y +    ++ A K F
Sbjct: 223 QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFF 282

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D M ER+  +W+T++A  +  G  + A+ +  R        D +  +    A+   G  R
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR--------DPVKSIPSQTALL-TGLAR 333

Query: 257 IGKAVHGYAMRAGF-DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            G+      +     D IV    A++  Y + G V+ A+ +FD M  RN +SW  MIA Y
Sbjct: 334 CGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGY 393

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  EEA+ + Q +   G+ P+  ++  +  AC+ +G LE G  VH L  +     + 
Sbjct: 394 AQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNS 453

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA------------------------ 411
            + N+LISMY KC+ ++    +F++++ K  VSWN+                        
Sbjct: 454 YVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR 513

Query: 412 -------MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
                  +I  YAQ  R +EA+ +F  M  ++ KP+S  +  ++     L   +  + IH
Sbjct: 514 DVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIH 573

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            + I+   +  + V  AL+ MY KCG   + + +FD M ER + TWN  I G   HGLG+
Sbjct: 574 TVAIKHGMDSELIVANALMSMYFKCGCADSHK-VFDSMEERDIFTWNTFITGCAQHGLGR 632

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A++++  M      PN++TF+  ++ACSH+GLV+EG  +F S+ +DYG+ P+++HY  M
Sbjct: 633 EAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACM 692

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGR G +  A  FI  MPIEP   ++ A+LGACKIHKN E+G +AA +LF  +P   
Sbjct: 693 VDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNA 752

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
           G +V+L+NIY++  MW ++A++R IM+++G+ K PGCS ++++N+VHSF +G  +H + +
Sbjct: 753 GNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIE 812

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I   L+ L   ++  GYVPDT  + HD+++  +E+ L  HSEKLA+A+GLL +  G  I
Sbjct: 813 EIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPI 872

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLR+CGDCH   K++S VT R+I +RD +RFH F+NG CSCGD+W
Sbjct: 873 QIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 250/528 (47%), Gaps = 55/528 (10%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD-AARVFEPIP 99
           A +L   T L++L     + PL++K+G     +  T +++++ +  S  D A + F+ + 
Sbjct: 227 ASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMV 286

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL--LKVCGDVGEIR-R 156
           ++ +  + TM+   +    +D A++   R   D V  +      L  L  CG + E R  
Sbjct: 287 ERNEYTWSTMIAALSHGGRIDAAIAVYGR---DPVKSIPSQTALLTGLARCGRITEARIL 343

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            ++I   ++V        +   ++  Y + G ++EA ++FDRMP R+ +SW  ++AG+AQ
Sbjct: 344 FEQIPDPIVV--------SWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQ 395

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG +E ALDL+  +H  G      ++ S   A +++G+L  G+ VH  A++AG      V
Sbjct: 396 NGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYV 455

Query: 277 STALVDMYAKC-------------------------------GRVETARLVFDGMKSRNV 305
             AL+ MY KC                                 +E AR +FD M SR+V
Sbjct: 456 CNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDV 515

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSW ++I+AY +    +EA+  F+ ML +  +P +  +   L  C  LG  + G  +H +
Sbjct: 516 VSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTV 575

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +  + +++ + N+L+SMY KC   D +  +F  ++ + + +WN  I G AQ+G   EA
Sbjct: 576 AIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREA 634

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA-LID 484
           +  +  M S  + P+  T V ++ A +   ++         + R      +    A ++D
Sbjct: 635 IKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVD 694

Query: 485 MYAKCGAV-GTARALFDMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           +  + G V G  + ++DM  E     W+ ++     H    +G+ A E
Sbjct: 695 LLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAE 742



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 237/550 (43%), Gaps = 83/550 (15%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA-PVVYN 140
             +   L +A  VF+ +P +    +++M+  Y     L+DA     R+ +D ++   V  
Sbjct: 43  LARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA-----RILFDAISGGNVRT 97

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            T LL      G  R G+ +  + + +G    +  A   +V+ Y + G I  A ++FD M
Sbjct: 98  ATILLS-----GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM 152

Query: 200 PERDLVSWNTIVAGF--------AQNGFAEL-----------------------ALDLVT 228
           P RD+ SWN++V G+        A N F ++                         D+  
Sbjct: 153 PSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR 212

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK-C 287
            MH EG   D     S+L AV  +  L + + +    ++ GF+S V + T+++++Y +  
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
             ++ A   FDGM  RN  +W++MIAA   GG  + A+ ++ +   + + P+   ++  L
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGL 331

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
             C  +   E  I   ++ D +     V   N++I+ Y +   VD A ++F ++  +  +
Sbjct: 332 ARCGRI--TEARILFEQIPDPI-----VVSWNAMITGYMQNGMVDEAKELFDRMPFRNTI 384

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SW  MI GYAQNGR  EAL+    +    + P   ++ S   A + +  +   + +H+L 
Sbjct: 385 SWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA 444

Query: 468 IRSCFEKNVFVMTALIDMYAKC-------------------------------GAVGTAR 496
           +++  + N +V  ALI MY KC                                 +  AR
Sbjct: 445 VKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDAR 504

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +FD M  R V +W  +I  Y     G  AVE F  ML    KPN       +S C   G
Sbjct: 505 HIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLG 564

Query: 557 LVEEGIHYFT 566
             + G    T
Sbjct: 565 SAKLGQQIHT 574



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 100/456 (21%)

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +LD  A +  +   A+ G++ EA ++FD MP RD+++WN++++ +  +G  E A      
Sbjct: 30  ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA------ 83

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI----VNVSTALVDMYA 285
                                                R  FD+I    V  +T L+  YA
Sbjct: 84  -------------------------------------RILFDAISGGNVRTATILLSGYA 106

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           + GRV  AR VFDGM  RN V+WN+M++ YV+ G+   A R+F  M      P+      
Sbjct: 107 RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM------PSR----- 155

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
                                       DV+  NS+++ Y   +++  A ++F ++  + 
Sbjct: 156 ----------------------------DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRN 187

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           LV+W  MI GY +  +  +  + F  M  +   PD     SV+ A+  L  +   + +  
Sbjct: 188 LVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRP 247

Query: 466 LVIRSCFEKNVFVMTALIDMYAK-CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           LV+++ FE +V + T+++++Y +   A+  A   FD M ER+  TW+ MI      G   
Sbjct: 248 LVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRID 307

Query: 525 AAVELFNKMLEGPTK--PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           AA+ ++ +    P K  P+    L  ++ C   G + E    F  +      +P++  + 
Sbjct: 308 AAIAVYGR---DPVKSIPSQTALLTGLARC---GRITEARILFEQIP-----DPIVVSWN 356

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           AM+    + G ++EA +   +MP    I+  G + G
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAG 392


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 290/781 (37%), Positives = 442/781 (56%), Gaps = 14/781 (1%)

Query: 43   SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +A  L  C+S   L ++   ++KSG        + LVS F ++  L +A  +F  + ++ 
Sbjct: 277  TATSLSSCSS-GVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERN 335

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG----EIRRGK 158
                + ++ G  K    ++AV   +  R D        +  LL    +       + RG+
Sbjct: 336  AVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLMRGR 394

Query: 159  EIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            E+HG ++  G   L +    G+VNMYAKCG I++A ++F  +  RD VSWNTI++   QN
Sbjct: 395  EVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQN 454

Query: 218  GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            GF E A+     M +          +S L + A++  L  G+ VH  A++ G D   +VS
Sbjct: 455  GFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVS 514

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE-EAMRIFQKMLDQGV 336
             ALV MY  CG    +  +F+ M   ++VSWNS++   V    P  E++ +F  M+  G+
Sbjct: 515  NALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGL 574

Query: 337  EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
             P  VT +  L A + L  LE G  VH ++ +     D ++ N+L+S Y+K   +D    
Sbjct: 575  TPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQ 634

Query: 397  IFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +FS + G+   VSWN+MI GY  NG + E ++    M   N   D  T   V+ A A ++
Sbjct: 635  LFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVA 694

Query: 456  VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             +     +HA  IRS  E +V V +AL+DMY+KCG +  A  +F+ M++++  +WN MI 
Sbjct: 695  ALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMIS 754

Query: 516  GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            GY  HGLG+ A+E+F +M      P+ +TF+  +SACSH+GLV+ G+ YF  + +D+GI 
Sbjct: 755  GYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYF-EMMEDHGIL 813

Query: 576  PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN---VELGEKA 632
            P ++HY  ++DLLGRAG+L +  ++I +MP++P   ++  +L AC+  K+   ++LG++A
Sbjct: 814  PHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEA 873

Query: 633  ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
            +  L EL+P     +VL +N YAA   W+  AK R  M    ++K  G S V L + VH+
Sbjct: 874  SRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHT 933

Query: 693  FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIA 751
            F +G   HP +K IY  L  LI +IK AGYVP T  +++D+E+  +E LLS HSEKLA+A
Sbjct: 934  FIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVA 993

Query: 752  FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            F L  SS    I I KNLRVCGDCH A +YIS +  R+II+RD  RFH F++G CSCGDY
Sbjct: 994  FVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDY 1053

Query: 812  W 812
            W
Sbjct: 1054 W 1054



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 271/571 (47%), Gaps = 22/571 (3%)

Query: 26  HTLSQRAYIPSRIYR--HPSA-LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLF 82
           H L      PSR     HP A LLL          R+   ++K GL         LV+L+
Sbjct: 42  HRLPPPQTPPSRSPPPVHPHAGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLY 101

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA---PVVY 139
            K + L+ A +VF+ + ++    +  ++ GY      D+A      M ++      P  +
Sbjct: 102 AKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPF 161

Query: 140 NYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC--GQIEEAYKM 195
            +  +L+ C D G   +    ++HG +    ++ +      +++MY  C  G   +A ++
Sbjct: 162 TFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQV 221

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGR---RGDFITIVSILPAVA- 250
           FD  P RDL++WN +++ +A+ G+      L   M H++     R +  T  S++ A + 
Sbjct: 222 FDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSL 281

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           +  S  +   V    +++G  S + V +ALV  +A+ G ++ A+ +F  +K RN V+ N 
Sbjct: 282 SSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNG 341

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG----DLERGIFVH-KL 365
           +I   V+    EEA+ IF    D  V  T+ T +  L A A+       L RG  VH  +
Sbjct: 342 LIVGLVKQHCSEEAVGIFMGTRDSFVVNTD-TFVVLLSAVAEFSIPEDGLMRGREVHGHI 400

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L    +   ++++N L++MY+KC  +D+A+ +F  L  +  VSWN +I    QNG    A
Sbjct: 401 LRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGA 460

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           +  +C MR   I P +F  +S + + A L ++   + +H   ++   + +  V  AL+ M
Sbjct: 461 MMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKM 520

Query: 486 YAKCGAVGTARALFDMMNERHVTTWN-VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           Y  CGA   +  +F+ M E  + +WN +M     +H     +VE+F+ M+     PN +T
Sbjct: 521 YGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVT 580

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           F+  +SA S   ++E G      + K   IE
Sbjct: 581 FVNLLSALSPLSVLELGKQVHAVVLKHGAIE 611



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 232/486 (47%), Gaps = 25/486 (5%)

Query: 155 RRGKE-----IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
           RRG+E     +H +L+  G + DLF    +VN+YAK  ++  A ++FD M ER+ VSW  
Sbjct: 68  RRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTC 127

Query: 210 IVAGFAQNGFAELALDLVTRMHEEG---RRGDFITIVSILPAVANVGS--LRIGKAVHGY 264
           +V+G+  +G  + A  +   M  EG    R    T  S+L A  + G   L     VHG 
Sbjct: 128 LVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGL 187

Query: 265 AMRAGFDSIVNVSTALVDMYAKC--GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             +  + S   V  AL+ MY  C  G    A+ VFD    R++++WN++++ Y + G   
Sbjct: 188 VSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVV 247

Query: 323 EAMRIFQKML--DQGVE-PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSM 377
               +F  ML  D  +E   N     +L     L     G+        LK G  +D+ +
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYV 307

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            ++L+S +++   +D A DIF  L+ +  V+ N +I+G  +     EA+  F   R   +
Sbjct: 308 GSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFV 367

Query: 438 KPDSFTMVSVIPALAELSV----IRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAV 492
             ++ T V ++ A+AE S+    +   + +H  ++R+   +  + +   L++MYAKCGA+
Sbjct: 368 V-NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  +F ++  R   +WN +I     +G  + A+  +  M +G   P++   +  +S+C
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +   L+  G        K +G++       A+V + G  G  +E+W+    M  E  I  
Sbjct: 487 ASLRLLTAGQQVHCDAVK-WGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVS 544

Query: 613 FGAMLG 618
           + +++G
Sbjct: 545 WNSIMG 550


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/793 (34%), Positives = 418/793 (52%), Gaps = 112/793 (14%)

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRR--GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           D +      Y  LL++C     I     + +H  +I +GF      +  ++++Y+K  ++
Sbjct: 5   DSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKL 64

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL--------------------------- 222
             A  +FD +P+ D+V+  T++A ++  G  +L                           
Sbjct: 65  NYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSH 124

Query: 223 ------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSL-RIGKAVHGYAMRAGFDSIVN 275
                 A++L   M  +  R D  T  S+L A+A V    +  + +H   +++G   + +
Sbjct: 125 NHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTS 184

Query: 276 VSTALVDMYAKCGR---------VETARLVFDGMKSRNV--------------------- 305
           V  AL+  Y KC           +  AR +FD M +R+                      
Sbjct: 185 VLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKE 244

Query: 306 ----------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
                     V+WN+MI+ Y   G   EA  +F+KM+   ++    T    +  CA+ G 
Sbjct: 245 FLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGC 304

Query: 356 LERGIFVHK--LLDQLKLGTDVSM--TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
              G  +H   L        DV+M   N+LI+ Y KC KVD A +IF+K+  + LVSWN 
Sbjct: 305 FRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNI 364

Query: 412 MILGY-------------------------------AQNGRVNEALNYFCKMRSKNIKPD 440
           ++ GY                               AQ G   EAL +F +M+ +  +P 
Sbjct: 365 ILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPC 424

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            +     I + + L  +++ + +HA V+R  +E ++    ALI MYA+CG V  A  LF 
Sbjct: 425 DYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFI 484

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M      +WN MI   G HG G  A+ELF +ML+    P+ I+FL  ISACSH+GLV+E
Sbjct: 485 NMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKE 544

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF S+   YG+ P  +HY  ++DLL RAG+ +EA + ++ MP EPG  ++ A+L  C
Sbjct: 545 GRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGC 604

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           +IH N++LG +AA RLFEL P   G +VLL+N+YA A  W+ +AKVR +M  +G++K PG
Sbjct: 605 RIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPG 664

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
           CS +E++N+VHSF  G   HP+ ++IY +LE L+ E++  GYVPDT  + HDVE  ++E+
Sbjct: 665 CSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEH 724

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            LS+HSEKLA+A+G +    G+T+ + KNLR+CGDCHNA K++S V GREI+VRD  RFH
Sbjct: 725 ELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFH 784

Query: 800 CFKNGVCSCGDYW 812
            F++G CSCGDYW
Sbjct: 785 HFRDGKCSCGDYW 797



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 239/544 (43%), Gaps = 86/544 (15%)

Query: 75  QTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +T L++ +     L  + ++F   P+  +    Y+ M+  Y+       A+     M+ D
Sbjct: 82  RTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRD 141

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--- 188
           +  P  Y +T +L     V E  +  +++H  ++ +G       +  +++ Y KC     
Sbjct: 142 NFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPS 201

Query: 189 ------IEEAYKMFDRMPERDLVSWNTIVAGFAQN------------------------- 217
                 + EA K+FD MP RD +SW TI+ G+ +N                         
Sbjct: 202 AQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMI 261

Query: 218 -GFAEL-----ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--- 268
            G+A       A ++  +M     + D  T  S++   AN G  R+GK +H Y ++    
Sbjct: 262 SGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVAN 321

Query: 269 -GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV----------- 316
              D  + V+ AL+  Y KCG+V+ A+ +F+ M  R++VSWN +++ YV           
Sbjct: 322 PAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSF 381

Query: 317 --------------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                               + G  EEA++ F +M  QG EP +     A+ +C+ LG L
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
           + G  +H  + +    + +S  N+LI+MY++C  VD A  +F  +     +SWNAMI   
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAAL 501

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI----RYAKWIHALVIRSCF 472
            Q+G+  +A+  F +M  + I PD  + ++VI A +   ++    +Y   +H +   +  
Sbjct: 502 GQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPD 561

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           E++      +ID+  + G    A+ + + M  E     W  ++ G   HG     +E   
Sbjct: 562 EEHY---ARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAE 618

Query: 532 KMLE 535
           ++ E
Sbjct: 619 RLFE 622



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 183/392 (46%), Gaps = 45/392 (11%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           L  T +++ + K N L  A         KL   ++ M+ GYA      +A     +M   
Sbjct: 224 LSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMS 283

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI--VNGFSLDLFAM---TGVVNMYAKCG 187
            +    + +T ++ VC + G  R GKE+H   +  V   + D+ AM     ++  Y KCG
Sbjct: 284 KIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDV-AMPVNNALITFYWKCG 342

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGF-------------------------------AQ 216
           +++ A ++F++MPERDLVSWN I++G+                               AQ
Sbjct: 343 KVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQ 402

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            GFAE AL    RM  +G           + + + +GSL+ G+ +H   +R G++S ++ 
Sbjct: 403 IGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSA 462

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             AL+ MYA+CG V+ A  +F  M   + +SWN+MIAA  + G   +A+ +F++ML +G+
Sbjct: 463 GNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGI 522

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLK----LGTDVSMTNSLISMYSKCKKVD 392
            P  ++ +  + AC+  G ++ G    K  D +     +  D      +I +  +  K  
Sbjct: 523 LPDRISFLTVISACSHAGLVKEG---RKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFS 579

Query: 393 RAADIFSKLQGKTLVS-WNAMILGYAQNGRVN 423
            A ++   +  +     W A++ G   +G ++
Sbjct: 580 EAKEVMESMPFEPGAPIWEALLAGCRIHGNID 611


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/747 (36%), Positives = 422/747 (56%), Gaps = 7/747 (0%)

Query: 64   IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
            +K G      F   L+ ++     + DA ++F  +  K    +  M+ GY K    D A+
Sbjct: 325  VKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKAL 384

Query: 124  SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                 M   +V P        L  C  +G +  G ++H      GF   +     ++ MY
Sbjct: 385  EVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 444

Query: 184  AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            AK   I++A ++F  M E+D+VSW++++AGF  N  +  AL     M     + + +T +
Sbjct: 445  AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFI 503

Query: 244  SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
            + L A A  G+LR GK +H Y +R G  S   V  AL+D+Y KCG+   A   F     +
Sbjct: 504  AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 304  NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
            +VVSWN M++ +V  G  + A+ +F +M+   +    +    AL ACA LG L+ GI +H
Sbjct: 564  DVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLH 621

Query: 364  KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            +L         V + N+L+ MY+K K +D+A ++F  +  K +VSW++MI G+  N R  
Sbjct: 622  ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 681

Query: 424  EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            +AL YF  M   ++KP+S T ++ + A A    +R  K IHA V+R       +V  AL+
Sbjct: 682  DALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALL 740

Query: 484  DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            D+Y KCG    A A F + +E+ V +WN+M+ G+  HGLG  A+ LFN+M+E    P+++
Sbjct: 741  DLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEV 800

Query: 544  TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
            TF+  + ACS +G+V +G   F    + + I P + HY  MVDLL R G+L EA++ I +
Sbjct: 801  TFVL-MCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINR 859

Query: 604  MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
            MPI+P   V+GA+L  C+IH++VELGE AA  + EL+P++  YHVLL ++Y  A  W ++
Sbjct: 860  MPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQV 919

Query: 664  AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
            A+VR  M +KGL++  GCS VE+K   H+F +    HPQ K I   L  + + +KA G+ 
Sbjct: 920  ARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFA 979

Query: 724  PDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
            P   S+ D E   ++++L  HSE+LA+AFGL+N++PG+TI + KN   C  CH   K IS
Sbjct: 980  P-VESLEDKE-VSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAIS 1037

Query: 784  LVTGREIIVRDMHRFHCFKNGVCSCGD 810
             +  REI VRD  + HCFK+G CSCGD
Sbjct: 1038 EIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 159/457 (34%), Positives = 261/457 (57%), Gaps = 1/457 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S+  ++  +  A RVF  +P++    ++ M+ GY K   L++A+    RM +  + P 
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPD 196

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           VY +  +L+ CG + + R G+E+H  ++  GF  ++  +  +V MYAKCG I  A K+FD
Sbjct: 197 VYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D +SWN ++AG  +N   E  L+L   M E   + + +TI S+  A   +  +  
Sbjct: 257 GMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF 316

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            K +HG+A++ GF   V    +L+ MY   GR+  A  +F  M++++ +SW +MI+ Y +
Sbjct: 317 AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK 376

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P++A+ ++  M    V P +VTI  AL ACA LG L+ GI +H+L         V +
Sbjct: 377 NGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+ MY+K K +D+A ++F  +  K +VSW++MI G+  N R  +AL YF  M   ++
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HV 495

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP+S T ++ + A A    +R  K IHA V+R       +V  AL+D+Y KCG    A A
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
            F + +E+ V +WN+M+ G+  HGLG  A+ LFN+M+
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 1/354 (0%)

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +  A++ M  + G +  A  VF  M  R+V SWN M+  Y + G  EEA+ ++ +ML 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G+ P   T    L  C  + D   G  VH  + +   G +V + N+L++MY+KC  +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F  +     +SWNAMI G+ +N      L  F  M    ++P+  T+ SV  A   
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           LS + +AK +H   ++  F  +V    +LI MY   G +G A  +F  M  +   +W  M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G    A+E++  M      P+D+T   A++AC+  G ++ GI     L ++ G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIK-LHELAQNKG 429

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
               +    A++++  ++  +++A +  + M  +  ++    + G C  H++ +
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD 483


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/661 (39%), Positives = 381/661 (57%), Gaps = 80/661 (12%)

Query: 154 IRRGKEIHGQLIVNGFS-LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +R G+    + + N  +  D+ +   +++ Y + G++ EA ++FDRMP RD+VSWN +V+
Sbjct: 48  VRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVS 107

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+A                   RRGD +    +  A                 +R  F  
Sbjct: 108 GYA-------------------RRGDMVEARRLFDAAP---------------VRDVF-- 131

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
                TA+V  YA+ G +E AR VFD M  RN VSWN+M+AAY++           ++M+
Sbjct: 132 ---TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ-----------RRMM 177

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           D+  E  N      +  C                       +V+  N++++ Y++   ++
Sbjct: 178 DEAKELFN------MMPC----------------------RNVASWNTMLTGYAQAGMLE 209

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F  +  K  VSW AM+  Y+Q G   E L  F +M       +      V+   A
Sbjct: 210 EAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA 269

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
           +++ +     +H  +IR+ +    FV  AL+ MY KCG +  AR  F+ M ER V +WN 
Sbjct: 270 DIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNT 329

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI GY  HG GK A+E+F+ M    TKP+DIT +  ++ACSHSGLVE+GI YF S+  D+
Sbjct: 330 MIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDF 389

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+    +HY  M+DLLGRAGRL EA D ++ MP EP  T++GA+LGA +IH+N ELG  A
Sbjct: 390 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSA 449

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A ++FEL+P+  G +VLL+NIYA++  W    K+R +ME++G++K PG S +E++N+VH+
Sbjct: 450 AEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHT 509

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           F +G   HP+ ++IY FLE L   +K AGYV  T+ + HDVE+  +E++L  HSEKLA+A
Sbjct: 510 FSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVA 569

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +G+LN  PG  I + KNLRVCGDCHNA KYIS + GR I++RD +RFH F+ G CSCGDY
Sbjct: 570 YGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDY 629

Query: 812 W 812
           W
Sbjct: 630 W 630



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 205/433 (47%), Gaps = 62/433 (14%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ ++ GY ++  + +A     RM   DV  V +N           G  RRG  +  + +
Sbjct: 71  WNALMSGYVQWGKMSEARELFDRMPGRDV--VSWNIMV-------SGYARRGDMVEARRL 121

Query: 166 VNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
            +   + D+F  T VV+ YA+ G +EEA ++FD MPER+ VSWN +VA + Q        
Sbjct: 122 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR------- 174

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
               RM +E +      + +++P   NV S                         ++  Y
Sbjct: 175 ----RMMDEAKE-----LFNMMP-CRNVASW----------------------NTMLTGY 202

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           A+ G +E A+ VFD M  ++ VSW +M+AAY +GG  EE +++F +M   G         
Sbjct: 203 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFA 262

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L  CAD+  LE G+ +H  L +   G    + N+L++MY KC  ++ A + F +++ +
Sbjct: 263 CVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEER 322

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-----LAELSVIRY 459
            +VSWN MI GYA++G   EAL  F  MR+ + KPD  T+V V+ A     L E  +  +
Sbjct: 323 DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYF 382

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYG 518
               H   + +  E      T +ID+  + G +  A  L  DM  E   T W  ++    
Sbjct: 383 YSMHHDFGVTAKPEH----YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASR 438

Query: 519 TH---GLGKAAVE 528
            H    LG++A E
Sbjct: 439 IHRNPELGRSAAE 451



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 190/403 (47%), Gaps = 24/403 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +VS + +   + +A R+F+  P +    +  ++ GYA+   L++A       R  D  P 
Sbjct: 105 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEA------RRVFDAMPE 158

Query: 138 VYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
               ++   V   +    +   KE+   +     +     +TG    YA+ G +EEA  +
Sbjct: 159 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTG----YAQAGMLEEAKAV 214

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT---IVSILPAVANV 252
           FD MP++D VSW  ++A ++Q G +E  L L   M   GR G+++       +L   A++
Sbjct: 215 FDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM---GRCGEWVNRSAFACVLSTCADI 271

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            +L  G  +HG  +RAG+     V  AL+ MY KCG +E AR  F+ M+ R+VVSWN+MI
Sbjct: 272 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 331

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKL 371
           A Y   G  +EA+ IF  M     +P ++T++  L AC+  G +E+GI + + +     +
Sbjct: 332 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 391

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
                    +I +  +  ++  A D+   +  +   +    +LG ++  R N  L     
Sbjct: 392 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHR-NPELGRSAA 450

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
            +   ++P++  M  ++  +   S     KW  A  +R   E+
Sbjct: 451 EKIFELEPENAGMYVLLSNIYASS----GKWRDARKMRVMMEE 489



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 13/293 (4%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           KEL  ++P       C        +++ + +   L +A  VF+ +P K    +  ML  Y
Sbjct: 181 KELFNMMP-------CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 233

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
           ++    ++ +   I M           +  +L  C D+  +  G ++HG+LI  G+ +  
Sbjct: 234 SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC 293

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F    ++ MY KCG +E+A   F+ M ERD+VSWNT++AG+A++GF + AL++   M   
Sbjct: 294 FVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT 353

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVE 291
             + D IT+V +L A ++ G +  G + + Y+M   F         T ++D+  + GR+ 
Sbjct: 354 STKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 412

Query: 292 TARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
            A  +   M    +   W +++ A     NPE      +K+ +  +EP N  +
Sbjct: 413 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFE--LEPENAGM 463



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 107/252 (42%), Gaps = 30/252 (11%)

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D    N +IS ++    V  A   F     K  VSWN M+  Y +NGRV EA   F    
Sbjct: 5   DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF---- 60

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE----KNVFVMTALIDMYAKC 489
                 +S T   VI   A +S   Y +W      R  F+    ++V     ++  YA+ 
Sbjct: 61  ------NSRTEWDVISWNALMS--GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR 112

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  AR LFD    R V TW  ++ GY  +G+ + A  +F+ M E     N +++   +
Sbjct: 113 GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPE----RNAVSWNAMV 168

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMD--HYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           +A     +++E    F  +       P  +   +  M+    +AG L EA      MP +
Sbjct: 169 AAYIQRRMMDEAKELFNMM-------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK 221

Query: 608 PGITVFGAMLGA 619
             ++ + AML A
Sbjct: 222 DAVS-WAAMLAA 232


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/682 (36%), Positives = 396/682 (58%), Gaps = 9/682 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           N   +L+VC   G   +G ++H  L+ +G  L+L     +++MY KC +   AYK+FD M
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PER++VSW+ +++G   NG  + +L L + M  +G   +  T  + L A   + +L  G 
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HG+ ++ GF+ +V V  +LVDMY+KCGR+  A  VF  +  R+++SWN+MIA +V  G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 320 NPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDV 375
              +A+  F  M +  ++  P   T+   L AC+  G +  G  +H  L        +  
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           ++T SL+ +Y KC  +  A   F +++ KT++SW+++ILGYAQ G   EA+  F +++  
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           N + DSF + S+I   A+ +++R  K + AL ++        V+ +++DMY KCG V  A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
              F  M  + V +W V+I GYG HGLGK +V +F +ML    +P+++ +L  +SACSHS
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G+++EG   F+ L + +GI+P ++HY  +VDLLGRAGRL EA   I  MPI+P + ++  
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L  C++H ++ELG++    L  +D      +V+++N+Y  A  W++    R +   KGL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA-GYVPD-TNSIHDVE 733
           +K  G S VE++ EVH F SG   HP +  I   L+     ++   GYV    + +HD++
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607

Query: 734 DYVQENLLSSHSEKLAIAFGLLN---SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           D  +E  L +HSEKLAI   L     +  G TI + KNLRVC DCH   K +S +T    
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           +VRD  RFH F++G CSCGDYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 250/471 (53%), Gaps = 9/471 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++KSG     +    L+ ++CK      A +VF+ +P++    +  ++ G+     L  +
Sbjct: 32  LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +S    M    + P  + ++  LK CG +  + +G +IHG  +  GF + +     +V+M
Sbjct: 92  LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--RRGDFI 240
           Y+KCG+I EA K+F R+ +R L+SWN ++AGF   G+   ALD    M E     R D  
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
           T+ S+L A ++ G +  GK +HG+ +R+GF   S   ++ +LVD+Y KCG + +AR  FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +K + ++SW+S+I  Y + G   EAM +F+++ +   +  +  +   +   AD   L +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +  L  +L  G + S+ NS++ MY KC  VD A   F+++Q K ++SW  +I GY +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVF 477
           +G   +++  F +M   NI+PD    ++V+ A +   +I+  + + + ++ +   +  V 
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG---LGK 524
               ++D+  + G +  A+ L D M  + +V  W  ++     HG   LGK
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/659 (37%), Positives = 383/659 (58%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           GL +     + L+ L+ +   LSDA  +F+ IP K   L++ ML GY K     +A+   
Sbjct: 88  GLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIF 147

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           + MR+ ++ P    +  +L VC     +  G ++HG  +  G  LD      ++ MY+KC
Sbjct: 148 LEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKC 207

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
             ++ A K+FD +P+ DLVSWN I++G+ QNG    A  L   M   G + D IT  S L
Sbjct: 208 QCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           P V  + SL+  K +HGY +R      V + +AL+D+Y KC  VE A+       S + V
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTV 327

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
              +MI+ YV  G  +EA+  F+ ++ + ++PT+VT      A A L  L  G  +H  +
Sbjct: 328 VCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            + KL     + ++++ MY+KC ++D A  +F+++  K  + WN+MI   +QNGR  EA+
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           N F +M  +  + D  ++   + A A L  + Y K IH L+I+     +++  ++LIDMY
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMY 507

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AKCG +  +R +FD M E++  +WN +I  YG HG  K  + LF++ML    +P+ +TFL
Sbjct: 508 AKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFL 567

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             ISAC H+G V+EGI Y+  + ++YGI   M+HY  + D+ GRAGRL+EA++ I  MP 
Sbjct: 568 GIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPF 627

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
            P   V+G +LGAC IH NVEL E A+  LF+LDP   GY+VLLAN+ A A  W K+ KV
Sbjct: 628 PPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           R+IM+++G++K PG S +E+ N  H F +    HP + +IY+ L++L+ E+K  GYVP 
Sbjct: 688 RSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 269/529 (50%), Gaps = 11/529 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ +  SL DA  +F  +     + ++ M++G+      + A+ F ++M    V+P  Y 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           + Y++K C  +  ++ GK +H  + + G   D+F  + ++ +YA+ G + +A  +FD +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ++D V WN ++ G+ +NG +  A+ +   M     + + +T   +L   A+   L +G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG A+  G +    V+  L+ MY+KC  ++ AR +FD +   ++VSWN +I+ YV+ G 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA  +F+ M+  G++P ++T    L    +L  L+    +H  + +  +  DV + ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI +Y KC+ V+ A     +      V    MI GY  NG+  EAL  F  +  + +KP 
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S T  S+ PA A L+ +   K +H  +I++  ++   V +A++DMYAKCG +  A  +F+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-----HS 555
            + E+    WN MI     +G    A+ LF +M    T+ + ++   A+SAC+     H 
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           G    G+     L+ D   E       +++D+  + G LN +     +M
Sbjct: 481 GKEIHGLMIKGPLRSDLYAE------SSLIDMYAKCGNLNFSRRVFDRM 523


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/649 (39%), Positives = 381/649 (58%), Gaps = 34/649 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F  + E + +SWNT++ G A +     AL+L   M   G   +  T   +  + A 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD------------- 298
             + + GK +H   ++ G    ++V T+L+ MYA+ G VE A  VFD             
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 299 --GMKSR----------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
             G  SR                +VVSWN+MI+ Y E G  +EA+ +F +M+   V+P  
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   L  C   G++E G  +H  +D    G+++ + N+LI +YSKC +++RA  +F  
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           LQ K ++SWN +I GYA      EAL  F +M      P+  TM+S++PA A L  I   
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 461 KWIHALVIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +WIH  + +       N  + T+LIDMYAKCG +  A  +FD +  + +++ N MI G+ 
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG   AA +L ++M +   +P+DITF+  +SACSH+GL + G   F S+  DY IEP +
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HYG M+DLLGR+G   EA + I  M +EP   ++G++L ACKIHKN+ELGE  A +L +
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMK 510

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           ++P   G +VLL+NIYA ++ WD +A+VRT++  KGL+K PGCS +E+ + VH F  G  
Sbjct: 511 IEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDK 570

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQ+K IY  LE +   +   G+V DT+ +  ++E+ ++E  LS HSEKLAIAFGL+++
Sbjct: 571 FHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLIST 630

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
            PG+ + I KNLRVC +CH ATK IS +  REII RD  RFH FK+G+C
Sbjct: 631 KPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 270/532 (50%), Gaps = 45/532 (8%)

Query: 64  IKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
           IK GL + +   +KL+  FC     ++ L  A  VF+ I +     ++TM++G+A  +  
Sbjct: 1   IKIGLHNTNYALSKLLD-FCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDP 59

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
             A++  + M    ++P  Y + +L K C      + GK+IH Q++  G ++DL   T +
Sbjct: 60  ISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119

Query: 180 VNMYAKCGQIEEAY-------------------------------KMFDRMPERDLVSWN 208
           ++MYA+ G +E+A+                               KMFD +P +D+VSWN
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            +++G+A+ G  + AL+L   M +   + D  T+ ++L    + G++ +G+ +H +    
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           GF S + +  AL+D+Y+KCG +E A  +F+G++ ++V+SWN++I  Y    + +EA+ +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYS 386
           Q+ML  G  P +VT++  L ACA LG ++ G ++H  +D+   G  T+ S+  SLI MY+
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  ++ A  +F  +  K+L S NAMI G+A +GR + A +   +M+   I+PD  T V 
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVG 419

Query: 447 VIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-E 504
           ++ A +   +    + I  ++ +    E  +     +ID+  + G    A  L + M  E
Sbjct: 420 LLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTME 479

Query: 505 RHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
                W  ++     H    LG+   +   K+   P  P     L  I A S
Sbjct: 480 PDGVIWGSLLKACKIHKNLELGELIAQKLMKI--EPKNPGSYVLLSNIYATS 529



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 176/349 (50%), Gaps = 35/349 (10%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           +E ++I   I+K GL       T L+S++ +   + DA +VF+    +    Y  M+ GY
Sbjct: 95  QEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGY 154

Query: 114 AKFASLD-------------------------------DAVSFLIRMRYDDVAPVVYNYT 142
           A   ++D                               +A+     M   DV P      
Sbjct: 155 ASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMA 214

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L  C   G +  G++IH  +  +GF  +L  +  ++++Y+KCG++E A+ +F+ +  +
Sbjct: 215 TVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK 274

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D++SWNT++ G+A     + AL +   M + G   + +T++SILPA A++G++ IG+ +H
Sbjct: 275 DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH 334

Query: 263 GYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
            Y  +     I N S  T+L+DMYAKCG +E A  VFD + ++++ S N+MI  +   G 
Sbjct: 335 VYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGR 394

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHAC--ADLGDLERGIFVHKLLD 367
            + A  +  +M   G+EP ++T +  L AC  A L DL R IF    LD
Sbjct: 395 ADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLD 443


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/677 (38%), Positives = 402/677 (59%), Gaps = 9/677 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDR 198
           YT L+    +   +   K +H  ++ +G    LF+  G  +++ Y KC  I EA K+FD 
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSG---SLFSFFGHKLIDGYIKCSVITEARKLFDE 60

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MP R +V+WN++++     G  + A++L   M  EG   D  T  +I  A + +G  R G
Sbjct: 61  MPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120

Query: 259 KAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           +  HG A+  GF+ S   V+T +VDMYAK G+++ AR VFD +  ++VV + ++I  Y +
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F+ M+   ++P   T+   L +C +LGDL  G  +H L+ +  L + V+ 
Sbjct: 181 RGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVAS 240

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             SL++MYSKC  V+ +  +F+ L   + V+W + I+G  QNGR   AL+ F +M   +I
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSI 300

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+ FT  S++ A + L+++   + IHA+ ++   + N +V  ALI +Y KCG V  AR+
Sbjct: 301 SPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARS 360

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+ + E  V + N MI  Y  +G G  A+ELF +M +   KPN +TF+  + AC+++GL
Sbjct: 361 VFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGL 420

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG   F+ ++ ++ IE   DHY  M+DLLGRA R  EA   I++    P +  +  +L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLL 479

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            ACKIH  VE+ EK   ++ +  P +GG H+LL NIYA+A  WD + ++++      L+K
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
           TP  S V++  EVH+F +G   HP++  I   L  LI+++   GY PDT  +  D+E+  
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEK 599

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGST-IHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
           + + L  HSEKLAIAF L  +   +T I I KNLRVCGDCH+  K++SL+TGR+II RD 
Sbjct: 600 KISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDA 659

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK G+CSC DYW
Sbjct: 660 KRFHHFKGGICSCKDYW 676



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 256/493 (51%), Gaps = 5/493 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL  L+ +   I+KSG      F  KL+  + K + +++A ++F+ +P++    +++M+ 
Sbjct: 16  SLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            +       +A+     M ++ V P  Y ++ + K   ++G  R G++ HG  +V GF +
Sbjct: 75  SHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEV 134

Query: 172 -DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D F  TG+V+MYAK G++++A  +FDR+ ++D+V +  ++ G+ Q G    AL++   M
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM 194

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
                + +  T+ S+L +  N+G L  GK +HG  +++G +S+V   T+L+ MY+KC  V
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMV 254

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E +  VF+ +   + V+W S I   V+ G  E A+ +F++M+   + P + T    LHAC
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHAC 314

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           + L  LE G  +H +  +L +  +  +  +LI +Y KC  V++A  +F  L    +VS N
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSIN 374

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
            MI  YAQNG  +EAL  F +M+    KP+  T +S++ A     ++     I +L+  +
Sbjct: 375 TMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNN 434

Query: 471 -CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
              E      T +ID+  +      A  L +      V  W  +++    HG  + A + 
Sbjct: 435 HSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKF 494

Query: 530 FNKMLEGPTKPND 542
             KML+    P D
Sbjct: 495 MKKMLD--QAPRD 505



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C +L +L   + I  L++KSGL      QT L++++ K N + D+ +VF  +  
Sbjct: 207 ASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAY 266

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                + + + G  +    + A+S    M    ++P  + ++ +L  C  +  +  G++I
Sbjct: 267 ASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQI 326

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   + +    ++++Y KCG +E+A  +F+ + E D+VS NT++  +AQNGF 
Sbjct: 327 HAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFG 386

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV---NVS 277
             AL+L  RM + G + + +T +SIL A  N G +  G  +  +++     SI    +  
Sbjct: 387 HEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQI--FSLIRNNHSIELTRDHY 444

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           T ++D+  +  R E A ++ +  K+ +V+ W +++ A    G  E A +  +KMLDQ 
Sbjct: 445 TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 421/736 (57%), Gaps = 20/736 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++++ K   L+ A R+F+ +P++    + T+++ +A+    + A +   R+R++     
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +LK+   +        +H      G   + F  +G+++ Y+ C  + +A  +F+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +  +D V W  +V+ +++N   E A           R     ++++I  A         
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAF----------RCAQSCSLLAISCA--------- 262

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            + +HG A++   D+  +V  AL+DMYAKCG ++ ARL F+ +   +V+  + MI+ Y +
Sbjct: 263 RQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 322

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +++   V P   ++   L AC ++  L+ G  +H    ++   +D+ +
Sbjct: 323 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 382

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+  Y+KC  +D +  IFS L+    VSWN +++G++Q+G   EAL+ FC+M++  +
Sbjct: 383 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 442

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
                T  SV+ A A  + IR+A  IH  + +S F  +  +  +LID YAKCG +  A  
Sbjct: 443 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 502

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  + ER + +WN +I GY  HG    A+ELF++M +   + NDITF+  +S C  +GL
Sbjct: 503 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGL 562

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V  G+  F S++ D+GI+P M+HY  +V LLGRAGRLN+A  FI  +P  P   V+ A+L
Sbjct: 563 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 622

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C IHKNV LG  +A ++ E++P +   +VLL+N+YAAA   D++A +R  M   G++K
Sbjct: 623 SSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 682

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S VE+K E+H+F  GS  HP  + I   LE L  +    GY+PD N + HDV+   
Sbjct: 683 VPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQ 742

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +  +L  HSE+LA+A+GL+ + PG  I I KNLR C DCH A   IS +  REIIVRD++
Sbjct: 743 KTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDIN 802

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F++G CSCGDYW
Sbjct: 803 RFHHFEDGKCSCGDYW 818



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 232/482 (48%), Gaps = 25/482 (5%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           L+ C   G+ R G+ +HG ++  G    LDLF    ++NMY K G +  A ++FDRMPER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++VS+ T+V   AQ G  E A  L  R+  EG   +   + ++L     + +  +   VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             A + G D    V + L+D Y+ C  V  A  VF+G+  ++ V W +M++ Y E   PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
            A R  Q      +        + +H CA          +  L D     T+  +  +L+
Sbjct: 246 NAFRCAQSCSLLAISCAR----QGIHGCA----------IKTLND-----TEPHVGGALL 286

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY+KC  +  A   F  +    ++  + MI  YAQ+ +  +A   F ++   ++ P+ +
Sbjct: 287 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 346

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ SV+ A   +  + + K IH   I+   E ++FV  AL+D YAKC  + ++  +F  +
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
            + +  +WN ++ G+   GLG+ A+ +F +M         +T+   + AC+ +  +    
Sbjct: 407 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 466

Query: 563 HYFTSLKKD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
               S++K  +  + V+ +  +++D   + G + +A    Q + +E  I  + A++    
Sbjct: 467 QIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYA 523

Query: 622 IH 623
           +H
Sbjct: 524 LH 525



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 6/175 (3%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           Q A +P     + S  +L  C S   +R   +I   I KS   +  +    L+  + K  
Sbjct: 438 QAAQMPCTQVTYSS--VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCG 495

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            + DA +VF+ + ++    ++ ++ GYA      DA+    RM   +V      +  LL 
Sbjct: 496 YIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 555

Query: 147 VCGDVGEIRRGKEIHGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           VC   G +  G  +   + I +G    +   T +V +  + G++ +A +    +P
Sbjct: 556 VCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP 610


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/736 (36%), Positives = 402/736 (54%), Gaps = 87/736 (11%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S   +Y +L  A  +F+ +P++    ++ ML GYA+   + +A      M   +    
Sbjct: 117 MISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNS--- 173

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++  +L      G I   +    +L  +    +L +   ++  Y K  ++ +A  +FD
Sbjct: 174 -ISWNGMLAAYVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFD 228

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RMPERD VSWNT+++G+AQNG     L    R+ EE    D  T                
Sbjct: 229 RMPERDEVSWNTMISGYAQNG----ELLEAQRLFEESPVRDVFTW--------------- 269

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                               TA+V  Y + G ++ AR VFDGM  +N VSWN++IA YV+
Sbjct: 270 --------------------TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQ 309

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               ++A  +F+ M  Q                                       +VS 
Sbjct: 310 CKRMDQARELFEAMPCQ---------------------------------------NVSS 330

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N++I+ Y++   + +A + F ++  +  +SW A+I GYAQ+G   EAL+ F +M+    
Sbjct: 331 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 390

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + +  T  S +   AE++ +   K +H  V+++  E   +V  AL+ MY KCG +  A  
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F+ + E+ V +WN MI GY  HG GK A+ LF  M +    P+D+T +  +SACSH+GL
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V++G  YF S+ +DYGI     HY  M+DLLGRAGRL++A + ++ MP EP    +GA+L
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GA +IH N ELGEKAA  +FE++PD  G +VLL+N+YAA+  W  + ++R  M  +G++K
Sbjct: 571 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 630

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S VE++N++H+F  G + HP+  RIYTFLE L  ++K  GYV  T  + HDVE+  
Sbjct: 631 VPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEE 690

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           + ++L  HSEKLA+AFG+L    G  I + KNLRVC DCHNA K+IS + GR II+RD H
Sbjct: 691 KVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSH 750

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F  G CSCGDYW
Sbjct: 751 RFHHFNGGQCSCGDYW 766



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 187/401 (46%), Gaps = 56/401 (13%)

Query: 69  CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
           C   +    +++ + +   + DA R+FE   D     ++ M+ GY K   L DA     R
Sbjct: 170 CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDR 229

Query: 129 M-------------------------RYDDVAPVVYNYTYLLKVCGDV-----GEIRR-- 156
           M                         R  + +PV   +T+   V G V      E RR  
Sbjct: 230 MPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF 289

Query: 157 -----GKEIHGQLIVNGF--------SLDLF---------AMTGVVNMYAKCGQIEEAYK 194
                   +    I+ G+        + +LF         +   ++  YA+ G I +A  
Sbjct: 290 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARN 349

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
            FDRMP+RD +SW  I+AG+AQ+G+ E AL L   M  +G R +  T  S L   A + +
Sbjct: 350 FFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 409

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L +GK VHG  ++AG +S   V  AL+ MY KCG ++ A +VF+G++ + VVSWN+MIA 
Sbjct: 410 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 469

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGT 373
           Y   G  +EA+ +F+ M   G+ P +VT++  L AC+  G +++G  + + +     +  
Sbjct: 470 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 529

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
           +      +I +  +  ++D A ++   +  +    +W A++
Sbjct: 530 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 72/352 (20%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDK------------------------LDAL------ 105
           T +VS + +   L +A RVF+ +P+K                         +A+      
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS 329

Query: 106 -YHTMLKGYAKFASLDDAVSFLIRMRYDDV---APVVYNY-------------------- 141
            ++TM+ GYA+   +  A +F  RM   D    A ++  Y                    
Sbjct: 330 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 389

Query: 142 --------TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
                   T  L  C ++  +  GK++HG+++  G     +    ++ MY KCG I++AY
Sbjct: 390 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAY 449

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +F+ + E+++VSWNT++AG+A++GF + AL L   M + G   D +T+V +L A ++ G
Sbjct: 450 IVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG 509

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNS 310
            +  G   + Y+M   +    N    T ++D+  + GR++ A+ +   M    +  +W +
Sbjct: 510 LVDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 568

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDLER 358
           ++ A    GN E   +  + + +  +EP N    V +     A    GD+ R
Sbjct: 569 LLGASRIHGNTELGEKAAKMIFE--MEPDNSGMYVLLSNLYAASGRWGDVGR 618



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 53/278 (19%)

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           K    L    D+   N  I+ + +  + D A  +F+ +  ++ +SWNAMI G   N +  
Sbjct: 38  KTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFY 97

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            A   F KM ++++   +  M+S          +RY                        
Sbjct: 98  LARQLFEKMPTRDLVSWN-VMIS--------GCVRYRN---------------------- 126

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
                   +  AR LFD M ER V +WN M+ GY  +G  K A E+F++M   P K N I
Sbjct: 127 --------LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM---PCK-NSI 174

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           ++   ++A   +G +E+    F S K D+ +      +  M+    +  RL +A     +
Sbjct: 175 SWNGMLAAYVQNGRIEDARRLFES-KADWELIS----WNCMMGGYVKRNRLVDARGIFDR 229

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           MP    ++ +  M+      +N EL E  A RLFE  P
Sbjct: 230 MPERDEVS-WNTMISG--YAQNGELLE--AQRLFEESP 262



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 18/246 (7%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+ R      L  C  +  L   +++   ++K+GL         L+ ++CK  ++ DA  
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VFE I +K    ++TM+ GYA+     +A+     M+   + P       +L  C   G 
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510

Query: 154 IRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
           + +G E    +  + G + +    T ++++  + G++++A  +   MP E D  +W  ++
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570

Query: 212 AGFAQNGFAEL---ALDLVTRMHEEGRRGDFITIVSILPAV---ANVGSLRIG------K 259
                +G  EL   A  ++  M E    G ++ + ++  A     +VG +R+       K
Sbjct: 571 GASRIHGNTELGEKAAKMIFEM-EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVK 629

Query: 260 AVHGYA 265
            V GY+
Sbjct: 630 KVPGYS 635


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/677 (36%), Positives = 412/677 (60%), Gaps = 9/677 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ L+        +   + +H  +I +GFS   F    +++ Y KCG + EA K+FD +P
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R +V+WN++++    +G ++ A++    M  EG   D  T  +I  A + +G +R G+ 
Sbjct: 63  SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122

Query: 261 VHGYAMRAGFDSIVN-VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            HG A+  G + +   V++ALVDMYAK  ++  A LVF  +  ++VV + ++I  Y + G
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              EA++IF+ M+++GV+P   T+   L  C +LGDL  G  +H L+ +  L + V+   
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQT 242

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL++MYS+C  ++ +  +F++L     V+W + ++G  QNGR   A++ F +M   +I P
Sbjct: 243 SLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISP 302

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           + FT+ S++ A + L+++   + IHA+ ++   + N +   ALI++Y KCG +  AR++F
Sbjct: 303 NPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D++ E  V   N MI  Y  +G G  A+ELF ++      PN +TF+  + AC+++GLVE
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F S++ ++ IE  +DH+  M+DLLGR+ RL EA   I+++   P + ++  +L +
Sbjct: 423 EGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNS 481

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           CKIH  VE+ EK  +++ EL P +GG H+LL N+YA+A  W+++ ++++ +    L+K+P
Sbjct: 482 CKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSP 541

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQEN 739
             S V++  EVH+F +G   HP+S  I+  L  L+ ++K  GY P+T  +  ++D  +E 
Sbjct: 542 AMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFV--LQDLDEEK 599

Query: 740 LLSS---HSEKLAIAFGLLNS-SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +SS   HSEKLAIA+ L  +    +TI I KNLRVCGDCH+  K++SL+TGR+II RD 
Sbjct: 600 KISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDS 659

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK G+CSC DYW
Sbjct: 660 KRFHHFKGGLCSCKDYW 676



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 253/486 (52%), Gaps = 3/486 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL  LR +   +IKSG     L   KL+  + K  SL++A ++F+ +P +    +++M+ 
Sbjct: 16  SLTTLRAVHTNVIKSGFSYSFLGH-KLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMIS 74

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS- 170
            +       +AV F   M  + V P  Y ++ + K    +G IR G+  HG  +V G   
Sbjct: 75  SHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEV 134

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
           LD F  + +V+MYAK  ++ +A+ +F R+ E+D+V +  ++ G+AQ+G    AL +   M
Sbjct: 135 LDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDM 194

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
              G + +  T+  IL    N+G L  G+ +HG  +++G +S+V   T+L+ MY++C  +
Sbjct: 195 VNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMI 254

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E +  VF+ +   N V+W S +   V+ G  E A+ IF++M+   + P   T+   L AC
Sbjct: 255 EDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQAC 314

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           + L  LE G  +H +  +L L  +     +LI++Y KC  +D+A  +F  L    +V+ N
Sbjct: 315 SSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAIN 374

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           +MI  YAQNG  +EAL  F ++++  + P+  T +S++ A     ++     I A +  +
Sbjct: 375 SMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNN 434

Query: 471 -CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
              E  +   T +ID+  +   +  A  L + +    V  W  +++    HG  + A ++
Sbjct: 435 HNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKV 494

Query: 530 FNKMLE 535
            +K+LE
Sbjct: 495 MSKILE 500



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 154/295 (52%), Gaps = 6/295 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C +L +L   + I  L++KSGL      QT L++++ + N + D+ +VF  +  
Sbjct: 207 ACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDY 266

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                + + + G  +    + AVS    M    ++P  +  + +L+ C  +  +  G++I
Sbjct: 267 ANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQI 326

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   + +A   ++N+Y KCG +++A  +FD + E D+V+ N+++  +AQNGF 
Sbjct: 327 HAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFG 386

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--T 278
             AL+L  R+   G   + +T +SIL A  N G +  G  +   ++R   +  + +   T
Sbjct: 387 HEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNIELTIDHFT 445

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            ++D+  +  R+E A ++ + +++ +VV W +++ +    G  E A ++  K+L+
Sbjct: 446 CMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE 500



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 160/388 (41%), Gaps = 61/388 (15%)

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           M  +  ++ Q     ++T + A+H              HKL+D                 
Sbjct: 1   MNFYSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFLGHKLIDG---------------- 44

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  +  A  +F +L  + +V+WN+MI  +  +G+  EA+ ++  M  + + PD++T 
Sbjct: 45  YIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTF 104

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEK-NVFVMTALIDMYAKCGAVGTARALFDMMN 503
            ++  A ++L +IR+ +  H L +    E  + FV +AL+DMYAK   +  A  +F  + 
Sbjct: 105 SAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVL 164

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG------- 556
           E+ V  +  +I GY  HGL   A+++F  M+    KPN+ T  C +  C + G       
Sbjct: 165 EKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQL 224

Query: 557 ----------------------------LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
                                       ++E+ I  F  L  DY  +     + + V  L
Sbjct: 225 IHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL--DYANQVT---WTSFVVGL 279

Query: 589 GRAGRLNEAWDFIQKM---PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
            + GR   A    ++M    I P      ++L AC     +E+GE+      +L  D   
Sbjct: 280 VQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNK 339

Query: 646 YH-VLLANIYAAASMWDKLAKVRTIMEK 672
           Y    L N+Y      DK   V  ++ +
Sbjct: 340 YAGAALINLYGKCGNMDKARSVFDVLTE 367


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 242/625 (38%), Positives = 382/625 (61%), Gaps = 18/625 (2%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           +W++I+  +  +    L+      M       +     S+L A   +   ++  ++H   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 266 MRAGFDSIVNVSTALVDMYAK---CGRV------------ETARLVFDGMKSRNVVSWNS 310
           +R G DS + ++ AL++ YAK    G+V            +  + VFD M  R+VVSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +IA + + G   EA+ + ++M   G ++P + T+   L   A+  D+ +G  +H    + 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               DV + +SLI MY+KC +++ +   F  L  K  +SWN++I G  QNG  +  L +F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M  +N+KP + +  SVIPA A L+ +   + +H  ++R  F+ N F+ ++L+DMYAKC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  AR +FD +++R +  W  +I G   HG    AV LF  MLE   +P  + F+  +
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP-IEP 608
           +ACSH+GLV+EG  YF S+++D+GI P ++HY A+ DLLGRAGRL EA+DFI  M  ++P
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
             +V+  +L AC+ HK+VEL EK  ++L  +D +  G +VL++NIY+AA  W   A++R 
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
            M KKGL+KTP CS +E+ N+VH+F +G   HP   +I   L+ L+++++  GYV DTN 
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616

Query: 729 I-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
           + HDV++ ++  LL +HSE+LAIA+G+++++ G+TI + KN+RVC DCH A K+I+ + G
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVG 676

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           REI VRD  RFH FKNG CSCGDYW
Sbjct: 677 REITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 226/448 (50%), Gaps = 19/448 (4%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + +++K Y   + L  + S    MR   V P  + +  LLK    +   +    +H   +
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 166 VNGFSLDLFAMTGVVNMYAK---CGQIEEAY------------KMFDRMPERDLVSWNTI 210
             G   DL+    ++N YAK    G++ + +            K+FD MP RD+VSWNT+
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197

Query: 211 VAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +AGFAQNG    ALD+V  M + G+ + D  T+ SILP  A    +  GK +HGYA+R G
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           FD  V + ++L+DMYAKC R+E +   F  +  ++ +SWNS+IA  V+ G  +  +  F+
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +ML + V+P  V+    + ACA L  L  G  +H  + +L    +  + +SL+ MY+KC 
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +  A  +F ++  + +V+W A+I+G A +G   +A++ F  M    ++P     ++V+ 
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLT 437

Query: 450 ALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
           A +   ++    ++ +++         +    A+ D+  + G +  A      M     T
Sbjct: 438 ACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPT 497

Query: 509 --TWNVMIDGYGTHGLGKAAVELFNKML 534
              W++++     H   + A ++ +K+L
Sbjct: 498 GSVWSILLAACRAHKSVELAEKVLDKLL 525



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 216/423 (51%), Gaps = 36/423 (8%)

Query: 2   SSHSQCQLSVFT-NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRIL 60
           +SHS   LS  + NS  + ++  ++H         + +  H  A  L  CT         
Sbjct: 86  TSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT--------- 136

Query: 61  PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK----LDAL----------- 105
              ++ GL         L++ + K++   +A +VF+  P +    +D +           
Sbjct: 137 ---VRLGLDSDLYIANALINTYAKFH---NAGKVFDVFPKRGESGIDCVKKVFDMMPVRD 190

Query: 106 ---YHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++T++ G+A+     +A+  +  M +   + P  +  + +L +  +  ++ +GKEIH
Sbjct: 191 VVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIH 250

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G  + NGF  D+F  + +++MYAKC ++E + + F  +P +D +SWN+I+AG  QNG  +
Sbjct: 251 GYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFD 310

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             L    RM +E  +   ++  S++PA A++ +L +G+ +HG  +R GFD    ++++LV
Sbjct: 311 RGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLV 370

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAKCG ++ AR VFD +  R++V+W ++I      G+  +A+ +F+ ML+ GV P  V
Sbjct: 371 DMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYV 430

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             M  L AC+  G ++ G  + + +     +   +    ++  +  +  +++ A D  S 
Sbjct: 431 AFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISN 490

Query: 401 LQG 403
           ++G
Sbjct: 491 MRG 493


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/804 (34%), Positives = 446/804 (55%), Gaps = 42/804 (5%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL+V  S  E+   R++    I++G       +   ++++ +   L DA RVF+    
Sbjct: 125 ASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSL 184

Query: 101 -KLDAL-YHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
             LD L +++++  Y       + +    +M     VAP    Y  ++  CG  GE + G
Sbjct: 185 LALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYG 244

Query: 158 KEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
             +HG++I  G  + +L+    +V  Y KCG ++ A ++F+R+  +D+VSWN ++A   Q
Sbjct: 245 AMVHGRIIKAGLEATNLW--NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQ 302

Query: 217 NGFAELALDLVTRMH--EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
            G  E AL L  RM   E   + + +T +S+L AV+ + +LR G+ +H +  R   +   
Sbjct: 303 RGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDT 362

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
           +++ +L+  Y+KC  V  AR +F+ +  R+++SWNSM+A Y +         IF++M+  
Sbjct: 363 SITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLS 422

Query: 335 GVEPTNVTIMEALHACA----DLGDLERGIFVHK-LLDQLKLG-TDVSMTNSLISMYSKC 388
           G+EP + ++    +A +     L    RG  +H  +L ++  G   +S++N+++ MY+K 
Sbjct: 423 GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKF 482

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            ++  A  IF  ++ +   SWNAM+ GY++N +  + L  F  +  +    D  ++  ++
Sbjct: 483 NRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILL 542

Query: 449 PALAELSVIRYAKWIHALVIR-----SCFEKNVF--VMTALIDMYAKCGAVGTARALFDM 501
            +   L  ++  K  HA+V +      C  ++    +  ALI MY+KCG++  A  +F  
Sbjct: 543 TSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLK 602

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  + V +W  MI G   HGL   A++LF +M     KPN +TFL  + AC+H GLV+EG
Sbjct: 603 MERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEG 662

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF-------- 613
            +YF S+  DYG+ P ++HY  M+DL GR+G+ + A     K  +E GIT+F        
Sbjct: 663 SYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRA-----KSLVEFGITLFKPYHDDIL 717

Query: 614 ---GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
                +LGAC   K ++LG +AA ++ EL+P++   ++LLAN+YA++ +W+   KVR  M
Sbjct: 718 NLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
             KGL+K  GCS ++  N  H F +G   HPQ K IY  L  L    +  GYVP T  + 
Sbjct: 778 RDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVL 837

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS-TIHIRKNLRVCGDCHNATKYISLVTGR 788
           HDV++  +E +L  HSEKLA++FGLLN   G+  I + KNLRVC DCH+  K+ SL+  R
Sbjct: 838 HDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKR 897

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           EI++RD  RFH F++G CSCGDYW
Sbjct: 898 EILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 285/578 (49%), Gaps = 23/578 (3%)

Query: 67  GLCDQHLFQTKLVSLF----CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           G   Q +F+    S F     ++  L  A ++F+  P++    +  ++  Y++  +   A
Sbjct: 46  GFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQA 105

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
                +M  + + P  ++   LLKV    GEI   +++HG  I  GF LD       + M
Sbjct: 106 FGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITM 165

Query: 183 YAKCGQIEEAYKMFDR--MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF- 239
           Y++CG +E+A ++FD   +   D++ WN+I+A +  +G     L L  +M   G      
Sbjct: 166 YSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTE 225

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T  S++ A  + G  + G  VHG  ++AG ++  N+  +LV  Y KCG ++ A  +F+ 
Sbjct: 226 LTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFER 284

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLE 357
           +  ++VVSWN+MIAA  + G  E A+ +F++ML  +  V+P  VT +  L A + L  L 
Sbjct: 285 ISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALR 344

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H  + +L L  D S+TNSLI+ YSKC++V +A +IF +L  + ++SWN+M+ GY 
Sbjct: 345 CGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYE 404

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE----LSVIRYAKWIHALVIRSCFE 473
           QN +     + F +M    I+PDS ++  +  A +     L   R  K IH  ++R    
Sbjct: 405 QNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITP 464

Query: 474 KNV--FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
             V   V  A++ MYAK   +  A  +F  M  R   +WN M+DGY  +   +  + +F 
Sbjct: 465 GGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFL 524

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE--PVMDHY----GAMV 585
            +L+     + ++    +++C     ++ G  +   + K +  +  P  D       A++
Sbjct: 525 DILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALI 584

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            +  + G + +A     KM     +  + AM+  C  H
Sbjct: 585 SMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHH 621



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 174/401 (43%), Gaps = 23/401 (5%)

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           S+ +++  A  +F     + ++SW+A+I  Y++ G   +A   F KM  + ++P+ F++ 
Sbjct: 66  SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLA 125

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-- 503
           S++        I   + +H   IR+ F  +  +  A I MY++CG +  A+ +FD  +  
Sbjct: 126 SLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLL 185

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGI 562
              +  WN +I  Y  HG     + LF KM+  G   P ++T+   ++AC  SG  + G 
Sbjct: 186 ALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
                + K  G+E   + + ++V   G+ G L  A    +++     +  + AM+ A + 
Sbjct: 246 MVHGRIIKA-GLEAT-NLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAANEQ 302

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI---MEKKGLQKTP 679
               E       R+ +++P      V   ++ +A S    L   R I   + +  L+   
Sbjct: 303 RGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVD- 361

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA-----AGYVPDTNS--IHDV 732
                 + N + +FYS   +  +++ I+  L  L+ +I +     AGY  +       D+
Sbjct: 362 ----TSITNSLITFYSKCREVGKAREIFERL--LLRDIISWNSMLAGYEQNEQQGRCFDI 415

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
              +  + +   S  L I F   +      I+ R+   + G
Sbjct: 416 FKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHG 456


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/699 (37%), Positives = 400/699 (57%), Gaps = 36/699 (5%)

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +F  L   VS + +       PV+     L KV     +I+  K +H ++    F  +  
Sbjct: 10  QFPKLQALVSSIRKSLVSPQNPVLV-LELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPS 68

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               ++  YA  G+   A  +FD +PER+++ +N ++  +  N   + AL +   M   G
Sbjct: 69  LGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGG 128

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              D  T   +L A +   +LRIG  +HG   + G D  + V   L+ +Y KCG +  AR
Sbjct: 129 FSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEAR 188

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            V D M+S++VVSWNSM+A Y +    ++A+ I ++M     +P   T+   L A     
Sbjct: 189 CVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAV---- 244

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
                             T+ S  N L              ++F  L+ K+LVSWN MI 
Sbjct: 245 ------------------TNTSSENVLY-----------VEEMFMNLEKKSLVSWNVMIS 275

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
            Y +N    ++++ + +M    ++PD+ T  SV+ A  +LS +   + IH  V R     
Sbjct: 276 VYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCP 335

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           N+ +  +LIDMYA+CG +  A+ +FD M  R V +W  +I  YG  G G  AV LF +M 
Sbjct: 336 NMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ 395

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
                P+ I F+  +SACSHSGL+ EG  YF  +  DY I P+++H+  +VDLLGR+GR+
Sbjct: 396 NSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRV 455

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           +EA++ I++MP++P   V+GA+L +C+++ N+++G  AA++L +L P+E GY+VLL+NIY
Sbjct: 456 DEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIY 515

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           A A  W ++  +R++M+++ ++K PG S VEL N+VH+F +G T HPQSK IY  L  L+
Sbjct: 516 AKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLV 575

Query: 715 DEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
            ++K  GYVP T+S +HDVE+  +E  L+ HSEKLAI F +LN+   S I I KNLRVCG
Sbjct: 576 GKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCG 634

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH A K IS +  REI++RD +RFH FK+G+CSCGDYW
Sbjct: 635 DCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 76/523 (14%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  VF+ IP++    Y+ M++ Y      DDA+     M     +P  Y Y  +LK C  
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
              +R G ++HG +   G  L+LF   G++ +Y KCG + EA  + D M  +D+VSWN++
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSM 205

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           VAG+AQN   + ALD+   M    ++ D  T+ S+LPAV N  S                
Sbjct: 206 VAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS---------------- 249

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           ++++ V                   +F  ++ +++VSWN MI+ Y++   P +++ ++ +
Sbjct: 250 ENVLYVEE-----------------MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQ 292

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M    VEP  +T    L AC DL  L  G  +H+ +++ KL  ++ + NSLI MY++C  
Sbjct: 293 MGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGC 352

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A  +F +++ + + SW ++I  Y   G+   A+  F +M++    PDS   V+++ A
Sbjct: 353 LEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSA 412

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            +   ++   K+    +         + +T +I+ +A                       
Sbjct: 413 CSHSGLLNEGKFYFKQMTDD------YKITPIIEHFA----------------------- 443

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
             ++D  G  G    A  +  +M   P KPN+  +   +S+C     ++ GI     L +
Sbjct: 444 -CLVDLLGRSGRVDEAYNIIKQM---PMKPNERVWGALLSSCRVYSNMDIGILAADKLLQ 499

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDF--------IQKMP 605
               E    +Y  + ++  +AGR  E            I+KMP
Sbjct: 500 LAPEES--GYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMP 540


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/786 (34%), Positives = 438/786 (55%), Gaps = 20/786 (2%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHL-FQTKLVSLFCKYNSLSDAARVFEPIP 99
           A LL+ C    +L E R+I  L +K  L   +L     +VS++   +S  DA   F+ + 
Sbjct: 47  ARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALE 106

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            +    +  ++  +A      + +  L RMR D V P    +   L  CGD   +R G  
Sbjct: 107 QRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIR 166

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNG 218
           IH  ++ +   +D      ++NMY KCG +  A ++F +M   R+++SW+ +    A +G
Sbjct: 167 IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHG 226

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
               AL     M   G +     +V+IL A ++   ++ G+ +H     +GF+S + V+ 
Sbjct: 227 NVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVAN 286

Query: 279 ALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           A++ MY +CG VE AR VFD M    R+VVSWN M++AYV     ++A++++Q+M    +
Sbjct: 287 AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QL 343

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
               VT +  L AC+   D+  G  +HK +   +L  +V + N+L+SMY+KC     A  
Sbjct: 344 RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARA 403

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM-------RSKNIKPDSFTMVSVIP 449
           +F K++ ++++SW  +I  Y +   V EA + F +M        S+ +KPD+   V+++ 
Sbjct: 404 VFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILN 463

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVT 508
           A A++S +   K +           +  V TA++++Y KCG +   R +FD +  R  V 
Sbjct: 464 ACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQ 523

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN MI  Y   G    A++LF +M     +P+  +F+  + ACSH+GL ++G  YFTS+
Sbjct: 524 LWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSM 583

Query: 569 KKDY-GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
             +Y  +   + H+G + DLLGR GRL EA +F++K+P++P    + ++L AC+ H++++
Sbjct: 584 TTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLK 643

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
             ++ AN+L  L+P     +V L+NIYA    W  +AKVR  M ++G++K  G S +E+ 
Sbjct: 644 RAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIG 703

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
             +H F +G   HP+++ I   L  L  ++K  GYVPDT  + H V++  +E LL SHSE
Sbjct: 704 KYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSE 763

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           +LAIA GL+++  G+ + + KNLRVC DCH ATK IS + GR+I+VRD  RFH FK+G C
Sbjct: 764 RLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKC 823

Query: 807 SCGDYW 812
           SC DYW
Sbjct: 824 SCQDYW 829



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 45/366 (12%)

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVD 392
           Q V   N T    L  CA    L  G  +H L +    L  ++ + N ++SMY+ C    
Sbjct: 37  QAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPG 96

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A   F  L+ + L SW  ++  +A +G+  E L    +MR   ++PD+ T ++ + +  
Sbjct: 97  DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 156

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWN 511
           +   +R    IH +V+ S  E +  V  AL++MY KCG++  A+ +F  M   R+V +W+
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 216

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLK 569
           +M   +  HG    A+  F  ML    K      +  +SACS   LV++G  IH   +L 
Sbjct: 217 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALS 276

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEA----------------WDFI------------ 601
              G E  +    A++ + GR G + EA                W+ +            
Sbjct: 277 ---GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333

Query: 602 -----QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
                Q+M +      + ++L AC   ++V LG     ++     DE   +V++ N  A 
Sbjct: 334 AIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVN---DELEKNVIVGN--AL 388

Query: 657 ASMWDK 662
            SM+ K
Sbjct: 389 VSMYAK 394


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/652 (38%), Positives = 390/652 (59%), Gaps = 4/652 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+     + DA  +F+ +P +   L++ ML GY K    + A+     MR   V 
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P   ++  LL VC   G +R G ++HG +I +GF  D      ++ MY+KCG + +A K+
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP+ D V+WN ++AG+ QNGF + A+ L   M   G + D IT  S LP+V   GSL
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           +  K VH Y +R G    V + +ALVD+Y K G VE A   F      +V    +MI+ Y
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD- 374
           V  G   EA+ +F+ ++ +G+ P  +T+   L ACA L  L+ G  +H   D LK G + 
Sbjct: 456 VLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELH--CDILKKGLEN 513

Query: 375 -VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
              + +S+  MY+K  ++D A   F ++  K  V WN MI+ ++QNG+   A++ F +M 
Sbjct: 514 VCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG 573

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           +   K DS ++ + + A A    + Y K +H  V+R+ F  + FV + LIDMY+KCG + 
Sbjct: 574 TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLA 633

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            AR++FDMM+ ++  +WN +I  YG HG  +  ++LF++M+E   +P+ +TFL  +SAC 
Sbjct: 634 LARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACG 693

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV+EGI+YF  + ++YGI   M+H+  MVDL GRAGRL+EA+D I+ MP  P    +
Sbjct: 694 HAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTW 753

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G++LGAC++H NVEL + A+  L ELDP+  GY+VLL+N++A A  W+ + KVR++M++K
Sbjct: 754 GSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEK 813

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           G+QK PG S +++    H F +    HPQS  IY  L+ L+ E++  GYVP 
Sbjct: 814 GVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 256/501 (51%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           +++R+I   ++  G+       ++++ ++    S  D   +F  +       ++ +++G+
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
           +     D A+ F  RM   +VAP  Y + Y++K CG +  +   K +H      GF +DL
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F  + ++ +Y   G I +A  +FD +P RD + WN ++ G+ +NG    AL     M   
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             + + ++ V +L   A  G +R G  +HG  +R+GF+S   V+  ++ MY+KCG +  A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +FD M   + V+WN +IA YV+ G  +EA+ +F+ M+  GV+  ++T    L +    
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           G L+    VH  + +  +  DV + ++L+ +Y K   V+ A   F +     +    AMI
Sbjct: 393 GSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMI 452

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            GY  NG   EALN F  +  + + P+  TM SV+PA A L+ ++  K +H  +++   E
Sbjct: 453 SGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLE 512

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
               V +++  MYAK G +  A   F  M  +    WN+MI  +  +G  + A++LF +M
Sbjct: 513 NVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQM 572

Query: 534 LEGPTKPNDITFLCAISACSH 554
               TK + ++    +SAC++
Sbjct: 573 GTSGTKFDSVSLSATLSACAN 593


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/737 (35%), Positives = 401/737 (54%), Gaps = 3/737 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K  +L+ A R+F+   ++    + TM+  Y+K     DA      M      P 
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              Y  LL  C D+   +   + H Q++  G  L+      +++ Y K G ++ A ++F 
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   D VS+N ++ G+A NG  E A++L   M   G +    T  +++ A   +     
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +HG+ ++  F   V V  A +D Y+K   V   R +F+ M   + VS+N +I AY  
Sbjct: 260 GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW 319

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  +E++ +FQ++     +  N      L   A   DL+ G  +H  +       D  +
Sbjct: 320 VGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRV 379

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +NSL+ MY+KC K + A  IF +L  ++ V W AMI    Q G     L  F +MR  N+
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
             D  T   V+ A A L+ I   K +H+ VIRS F  NV+   AL+DMYA C ++  A  
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIK 498

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            F+ M+ER+V TWN ++  Y  +G GK  ++ F +M+    +P+ ++FLC ++ACSH  L
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRL 558

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG+ YF  +   Y + P  +HY AMVD L R+GR +EA   + +MP EP   V+ ++L
Sbjct: 559 VEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618

Query: 618 GACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
            +C+IHKN  L  KAA +LF +    +   +V ++NI+A A  WD + KV+  M  +G++
Sbjct: 619 NSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVR 678

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDY 735
           K P  S VE+K++VH F +   KHPQ   I   +E L ++++  GY PD +  H +V+  
Sbjct: 679 KLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKE 738

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            + + L  HSE+LAIAF L+N+  GS I + KNLR C DCH A K IS + GREI VRD 
Sbjct: 739 SKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDS 798

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH F++G CSCGDYW
Sbjct: 799 NRFHHFRDGSCSCGDYW 815



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 232/487 (47%), Gaps = 13/487 (2%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           P+   + +++K   + G++ + +++  Q+   N FS+D+     +++ Y K G +  A +
Sbjct: 41  PITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDI-----IISGYVKSGNLTVARR 95

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD   ER +V+W T++  ++++     A  L   MH  G + D++T +++L    ++  
Sbjct: 96  IFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEV 155

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +     H   ++ G      V   L+D Y K G +++AR +F  M   + VS+N MI  
Sbjct: 156 AKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITG 215

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  EEA+ +F +M + G +P++ T    + A   L D   G  +H  + +     +
Sbjct: 216 YANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRN 275

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V + N+ +  YSK   V+    +F+++     VS+N +I  YA  G+V E+++ F +++ 
Sbjct: 276 VFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQF 335

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
                 +F   +++   A    ++  + +HA V+ S  + +  V  +L+DMYAKCG    
Sbjct: 336 TTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEE 395

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  ++ R    W  MI      GL +  ++LF +M       +  TF C + A ++
Sbjct: 396 ADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASAN 455

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYG--AMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
              +  G    + + +       M+ Y   A++D+      + +A    ++M  E  +  
Sbjct: 456 LASILLGKQLHSCVIR----SGFMNVYSGCALLDMYANCASIKDAIKTFEEMS-ERNVVT 510

Query: 613 FGAMLGA 619
           + A+L A
Sbjct: 511 WNALLSA 517



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 159/304 (52%), Gaps = 1/304 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I   ++K+            +  + K++ +++  ++F  +P+     Y+ ++  YA  
Sbjct: 261 QQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWV 320

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
             + +++     +++       + +  +L +     +++ G+++H Q++V+    D    
Sbjct: 321 GKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVS 380

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MYAKCG+ EEA ++F R+  R  V W  +++   Q G  E  L L   M      
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            D  T   +L A AN+ S+ +GK +H   +R+GF ++ +   AL+DMYA C  ++ A   
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYS-GCALLDMYANCASIKDAIKT 499

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F+ M  RNVV+WN++++AY + G+ +  ++ F++M+  G +P +V+ +  L AC+    +
Sbjct: 500 FEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLV 559

Query: 357 ERGI 360
           E G+
Sbjct: 560 EEGL 563


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/649 (37%), Positives = 402/649 (61%), Gaps = 15/649 (2%)

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +  D+   + +++M A+ G +  A K+FD + E+ +V W  +++ + Q   AE A+++  
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
              E+G   D  T+ S++ A   +GS+R+G  +H  A+R GF S   VS  LVDMYAK  
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303

Query: 289 ---RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE-EAMRIFQKMLDQGVEPTNVTIM 344
               ++ A  VF+ M+  +V+SW ++I+ YV+ G  E + M +F +ML++ ++P ++T  
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L ACA++ D + G  VH  + +       ++ N+L+SMY++   ++ A  +F++L  +
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           +++S           GR +  L++  ++   ++   S T  S+I A A + ++   + +H
Sbjct: 424 SMISC-------ITEGR-DAPLDH--RIGRMDMGISSSTFASLISAAASVGMLTKGQQLH 473

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A+ +++ F  + FV  +L+ MY++CG +  A   F+ + +R+V +W  MI G   HG  +
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+ LF+ M+    KPND+T++  +SACSH GLV EG  YF S+++D+G+ P M+HY  M
Sbjct: 534 RALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACM 593

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLL R+G + EA +FI +MP++    V+  +LGAC+ H N+E+GE AA  + EL+P + 
Sbjct: 594 VDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDP 653

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +VLL+N+YA A +WD++A++R+ M    L K  G S +E++N  H F +G T HP+++
Sbjct: 654 APYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQ 713

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            IY  L+TL+ EIK  GYVPDT+ + HD+ D ++E  L  HSEK+A+AFGL+ +S    I
Sbjct: 714 DIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPI 773

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLRVC DCH+A KY+S  T REII+RD +RFH  K+G CSCG+YW
Sbjct: 774 RIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/775 (35%), Positives = 446/775 (57%), Gaps = 11/775 (1%)

Query: 46  LLEVCTSLK-EL--RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  C SL+ EL   ++L  +IK GL         L+S+F  + S+ +A  VF  + +  
Sbjct: 137 VISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHD 196

Query: 103 DALYHTMLKGYAKFASLDDAV---SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
              +++M+  Y +     +++   S++ R+  +  +  +   + +L  CG V  ++ G+ 
Sbjct: 197 TISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTL---STMLAGCGSVDNLKWGRG 253

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH  ++  G++ ++ A   ++ MY+  G+ E+A  +F  M E+D++SWN+++A +AQ+G 
Sbjct: 254 IHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGN 313

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
              AL L+  M    R  +++T  S L A ++      GK +H   +  G    V V  A
Sbjct: 314 CLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNA 373

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           LV +YAK G +  A+ VF  M  R+ V+WN++I  + +   P+EA++ F+ M ++GV   
Sbjct: 374 LVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPIN 433

Query: 340 NVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            +TI   L AC    DL E G+ +H  +      +D  + NSLI+MY+KC  ++ + +IF
Sbjct: 434 YITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIF 493

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            +L  K   +WNAM+   A +G + EAL +  +MR   +  D F+    + A A+L+++ 
Sbjct: 494 DRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILE 553

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + +H L ++   + N FV +A +DMY KCG +     +      R   +WN++   + 
Sbjct: 554 EGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFS 613

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG  + A E F++M+    KP+ +TF+  +SACSH G+VEEG+ Y+ S+ K++GI   +
Sbjct: 614 RHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKI 673

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            H   ++DLLGR+GR  EA  FI++MP+ P   V+ ++L ACK H N+ELG KA   L +
Sbjct: 674 GHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLK 733

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP +   +VL +NI A    W+ + K+R  M    ++K P CS V+LKN++  F  G  
Sbjct: 734 LDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDH 793

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQ+  IY  LE L   IK AGY+PD + ++ D ++  +E+ L +HSE+LA+A+GL++S
Sbjct: 794 SHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISS 853

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             GST+ I KNLRVCGDCH+  K+ S + GR+I++RD +RFH F  G CSC DYW
Sbjct: 854 PEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/631 (25%), Positives = 307/631 (48%), Gaps = 5/631 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E  ++   I+K GL       T LV L+  Y   +DA +VF+ +  K    +  ++  
Sbjct: 46  LIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVA 105

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y  +      ++   RMR + ++      + ++  C  +     G ++ G +I  G   +
Sbjct: 106 YVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETN 165

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +     +++M+   G +EEA  +F  M E D +SWN+++A + +NG  + +L   + M  
Sbjct: 166 VSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFR 225

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
             +  +  T+ ++L    +V +L+ G+ +H   ++ G++S V  S  L+ MY+  GR E 
Sbjct: 226 VHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCED 285

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A LVF GM  ++++SWNSM+A Y + GN  +A+++   M         VT   AL AC+D
Sbjct: 286 AELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSD 345

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
                 G  +H L+  + L  +V + N+L+++Y+K   +  A  +F  +  +  V+WNA+
Sbjct: 346 PEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNAL 405

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA-LAELSVIRYAKWIHALVIRSC 471
           I G+A +   +EAL  F  MR + +  +  T+ +V+ A LA   ++ +   IHA +I + 
Sbjct: 406 IGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTG 465

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ + +V  +LI MYAKCG + ++  +FD +  ++ + WN M+     HG  + A++   
Sbjct: 466 FQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLL 525

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M       ++ +F   ++A +   ++EEG      L    G +       A +D+ G+ 
Sbjct: 526 EMRRAGVNVDEFSFSECLAAAAKLAILEEG-QQLHGLAVKLGCDSNPFVASATMDMYGKC 584

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL--DPDEGGYHVL 649
           G +++    I + PI      +  +  +   H   E  ++  + +  L   PD   +  L
Sbjct: 585 GEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSL 643

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           L+       + + LA   +++++ G+    G
Sbjct: 644 LSACSHGGMVEEGLAYYDSMIKEFGIPAKIG 674



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 247/500 (49%), Gaps = 9/500 (1%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVN 167
           + G+ +  S  +++ F   MR   V P       L+  C +  E  +  G ++HG ++  
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTAC-ERSEWMLIEGVQVHGFIVKV 59

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           G   D+F  T +V++Y   G   +A K+F  M  +++VSW  ++  +   G   + +++ 
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            RM  EG   +  T+ S++    ++ +  +G  V G+ ++ G ++ V+V+ +L+ M+   
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G VE A  VF GM   + +SWNSMIAAY+  G  +E++R F  M     E  + T+   L
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
             C  + +L+ G  +H L+ +    ++V  +N+LI+MYS   + + A  +F  +  K ++
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SWN+M+  YAQ+G   +AL     M       +  T  S + A ++       K +HALV
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I     +NV V  AL+ +YAK G +  A+ +F  M +R   TWN +I G+        A+
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419

Query: 528 ELFNKMLEGPTKPNDITFLCAISAC-SHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAM 584
           + F  M E     N IT    + AC + + L+E G  IH F  L      E V +   ++
Sbjct: 420 KAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQN---SL 476

Query: 585 VDLLGRAGRLNEAWDFIQKM 604
           + +  + G LN + +   ++
Sbjct: 477 ITMYAKCGDLNSSNNIFDRL 496


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/711 (36%), Positives = 405/711 (56%), Gaps = 42/711 (5%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDR 198
           Y  LL+ C ++      K+IH  +I  G +  +F  + +++  A    G +  A  +F+ 
Sbjct: 31  YLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE 87

Query: 199 MPER---DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
             +    ++  WN+++ G++ +     +L L +RM   G + +  T   +  +     + 
Sbjct: 88  NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN----------- 304
             GK +H +A++       +V T+++ MYA  G ++ ARLVFD    R+           
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207

Query: 305 --------------------VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
                               VVSWN+MI+ YV+ G  EEA+  F +M +  V P   T++
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L AC      E G ++   +     G+++ +TN+LI MY KC + D A ++F  ++ K
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            ++SWN MI GY+      EAL  F  M   N+KP+  T + ++ A A L  +   KW+H
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVH 387

Query: 465 ALVIRSCFEK-NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           A + ++     N  + T+LIDMYAKCG +  A  +F  M+ R++ +WN M+ G+  HG  
Sbjct: 388 AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHA 447

Query: 524 KAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           + A+ LF++M+ +G  +P+DITF+  +SAC+ +GLV+ G  YF S+ +DYGI P + HYG
Sbjct: 448 ERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYG 507

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DLL RA +  EA   ++ M +EP   ++G++L ACK H  VE GE  A RLF+L+P+
Sbjct: 508 CMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE 567

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G  VLL+NIYA A  WD +A++RT +  KG++K PGC+ +E+  +VH F  G   HP+
Sbjct: 568 NAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPE 627

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
              IY  L  +   ++  G+VP+T+ + +D+++  +E  LS HSEKLAI+FGL+ + PG+
Sbjct: 628 CNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGT 687

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TI I KNLRVCG+CH+ATK IS +  REII RD +RFH FK+G CSC D W
Sbjct: 688 TIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 263/529 (49%), Gaps = 43/529 (8%)

Query: 35  PSRIY-RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN---SLSD 90
           P +I  +HP   LLE C ++   ++I  LIIK+GL +    Q+KL+  FC  +    LS 
Sbjct: 22  PYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDLSY 80

Query: 91  AARVFEPIPDKLDA---LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           A  +FE           +++++++GY+  +S   ++    RM Y  V P  + + +L K 
Sbjct: 81  ALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKS 140

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ------------------- 188
           C        GK++H   +      +    T V++MYA  G+                   
Sbjct: 141 CTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF 200

Query: 189 ------------IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
                       +++A ++FD +P +D+VSWN +++G+ Q+G  E A+     M E    
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T+V +L A  +  S  +GK +  +    GF S + ++ AL+DMY KCG  + AR +
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAREL 320

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FDG++ ++V+SWN+MI  Y      EEA+ +F+ ML   V+P +VT +  LHACA LG L
Sbjct: 321 FDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGAL 380

Query: 357 ERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           + G +VH  +D+ L+  ++ S+  SLI MY+KC  ++ A  +F  +  + L SWNAM+ G
Sbjct: 381 DLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSG 440

Query: 416 YAQNGRVNEALNYFCKMRSKNI-KPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFE 473
           +A +G    AL  F +M +K + +PD  T V V+ A  +  ++    ++  +++      
Sbjct: 441 FAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGIS 500

Query: 474 KNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
             +     +ID+ A+      A  L  +M  E     W  ++     HG
Sbjct: 501 PKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 223/449 (49%), Gaps = 10/449 (2%)

Query: 11  VFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCD 70
           +F + T  +  HE K   +    +      H    ++ +  S+ E+     +  KS L D
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRD 196

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
              F T L++ +     L DA R+F+ IP K    ++ M+ GY +    ++A+     M+
Sbjct: 197 AVSF-TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
             +V P       +L  CG       GK I   +  NGF  +L     +++MY KCG+ +
Sbjct: 256 EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETD 315

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
            A ++FD + E+D++SWNT++ G++     E AL L   M     + + +T + IL A A
Sbjct: 316 IARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACA 375

Query: 251 NVGSLRIGKAVHGYAMRAGFDSI-VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
            +G+L +GK VH Y  +   +S   ++ T+L+DMYAKCG +E A  VF  M SRN+ SWN
Sbjct: 376 CLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWN 435

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGV-EPTNVTIMEALHACADLGDLERG-IFVHKLLD 367
           +M++ +   G+ E A+ +F +M+++G+  P ++T +  L AC   G ++ G  +   ++ 
Sbjct: 436 AMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ 495

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEAL 426
              +   +     +I + ++ +K + A  +   ++ +   + W +++     +GRV    
Sbjct: 496 DYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE--F 553

Query: 427 NYFCKMRSKNIKPD---SFTMVSVIPALA 452
             +   R   ++P+   +F ++S I A A
Sbjct: 554 GEYVAERLFQLEPENAGAFVLLSNIYAGA 582


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/819 (33%), Positives = 443/819 (54%), Gaps = 72/819 (8%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K GL         LV+++ K+  + +   +FE +P +   L++ MLK Y +    ++A+ 
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232

Query: 125 F------------------LIRMRYDD-----------------VAPVVY---------- 139
                              L R+  DD                 V+ +++          
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292

Query: 140 --NYTYLLKVCGDVGE----------------------IRRGKEIHGQLIVNGFSLDLFA 175
              Y+ LLK   D+ E                      +  G+++H   +  G  L L  
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
              ++NMY K  +   A  +FD M ERDL+SWN+++AG AQNG    A+ L  ++   G 
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412

Query: 236 RGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
           + D  T+ S+L A +++   L + K VH +A++    S   VSTAL+D Y++   ++ A 
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           ++F+   + ++V+WN+M+A Y +  +  + +++F  M  QG    + T+      C  L 
Sbjct: 473 ILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            + +G  VH    +     D+ +++ ++ MY KC  +  A   F  +     V+W  MI 
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           G  +NG    A + F +MR   + PD FT+ ++  A + L+ +   + IHA  ++     
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           + FV T+L+DMYAKCG++  A  LF  +   ++T WN M+ G   HG GK  ++LF +M 
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
               KP+ +TF+  +SACSHSGLV E   +  S+  DYGI+P ++HY  + D LGRAG +
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
            +A + I+ M +E   +++  +L AC++  + E G++ A +L EL+P +   +VLL+N+Y
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           AAAS WD++   RT+M+   ++K PG S +E+KN++H F      + Q++ IY  ++ +I
Sbjct: 832 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891

Query: 715 DEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
            +IK  GYVP+T+ ++ DVE+  +E  L  HSEKLA+AFGLL++ P + I + KNLRVCG
Sbjct: 892 RDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCG 951

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCHNA KYI+ V  REI++RD +RFH FK+G+CSCGDYW
Sbjct: 952 DCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 264/537 (49%), Gaps = 14/537 (2%)

Query: 11  VFTNSTPTQTLHEHKHTLSQRAY---IPSRIYRHPSALLLEVCT-----SLKELRRILPL 62
           +F N   ++ LH  +++   + +   + S +       +L + T     SL   +++  +
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            +K GL         L++++CK      A  VF+ + ++    +++++ G A+     +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLI-VNGFSLDLFAMTGVV 180
           V   +++    + P  Y  T +LK    + E +   K++H   I +N  S D F  T ++
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALI 459

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           + Y++   ++EA  +F+R    DLV+WN ++AG+ Q+      L L   MH++G R D  
Sbjct: 460 DAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+ ++      + ++  GK VH YA+++G+D  + VS+ ++DMY KCG +  A+  FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              + V+W +MI+  +E G  E A  +F +M   GV P   TI     A + L  LE+G 
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H    +L    D  +  SL+ MY+KC  +D A  +F +++   + +WNAM++G AQ+G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
              E L  F +M+S  IKPD  T + V+ A +   ++  A K + ++      +  +   
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758

Query: 480 TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           + L D   + G V  A  L + M+ E   + +  ++      G  +    +  K+LE
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 278/612 (45%), Gaps = 71/612 (11%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA-----SLDDAVSFLIRMRYD 132
           L+S++ K  SL+ A RVF+ +PD+    ++++L  YA+ +     ++  A      +R D
Sbjct: 80  LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
            V       + +LK+C   G +   +  HG     G   D F    +VN+Y K G+++E 
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +F+ MP RD+V WN ++  + + GF E A+DL +  H  G   + IT           
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----------- 248

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
             LR+       A  +G DS               G+V++     D      ++  N  +
Sbjct: 249 --LRL------LARISGDDS-------------DAGQVKSFANGNDASSVSEIIFRNKGL 287

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + Y+  G     ++ F  M++  VE   VT +  L     +  L  G  VH +   LKLG
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM--ALKLG 345

Query: 373 TDVSMT--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
            D+ +T  NSLI+MY K +K   A  +F  +  + L+SWN++I G AQNG   EA+  F 
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           ++    +KPD +TM SV+ A + L   +  +K +H   I+     + FV TALID Y++ 
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465

Query: 490 GAVGTARALFDMMNERH---VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
             +  A  LF    ERH   +  WN M+ GY     G   ++LF  M +   + +D T  
Sbjct: 466 RCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521

Query: 547 CAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
                C     + +G  +H + ++K  Y ++  +     ++D+  + G ++ A      +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAY-AIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSI 578

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEK-------AANRLFELDPDEGGYHVLLANIYAAA 657
           P+ P    +  M+  C     +E GE+       +  RL  + PDE      +A +  A+
Sbjct: 579 PV-PDDVAWTTMISGC-----IENGEEERAFHVFSQMRLMGVLPDE----FTIATLAKAS 628

Query: 658 SMWDKLAKVRTI 669
           S    L + R I
Sbjct: 629 SCLTALEQGRQI 640



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 37/402 (9%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK  H +++    + + F +  +++MY+KCG +  A ++FD+MP+RDLVSWN+I+A +AQ
Sbjct: 58  GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117

Query: 217 NGFA-----ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +        + A  L   + ++      +T+  +L    + G +   ++ HGYA + G D
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
               V+ ALV++Y K G+V+  +++F+ M  R+VV WN M+ AY+E G  EEA+ +    
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              G+ P  +T+        D  D  +       +     G D S  + +I         
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQ-------VKSFANGNDASSVSEII--------- 281

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
                     + K L         Y  +G+ +  L  F  M   +++ D  T + ++   
Sbjct: 282 ---------FRNKGLSE-------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
            ++  +   + +H + ++   +  + V  +LI+MY K    G AR +FD M+ER + +WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            +I G   +GL   AV LF ++L    KP+  T    + A S
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 9/310 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           ++ + +++    IKSG        + ++ ++ K   +S A   F+ IP   D  + TM+ 
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G  +    + A     +MR   V P  +    L K    +  + +G++IH   +    + 
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D F  T +V+MYAKCG I++AY +F R+   ++ +WN ++ G AQ+G  +  L L  +M 
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711

Query: 232 EEGRRGDFITIVSILPAVANVG----SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             G + D +T + +L A ++ G    + +  +++HG     G    +   + L D   + 
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRA 768

Query: 288 GRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIME 345
           G V+ A  + + M      S + +++AA    G+ E   R+  K+L+ + ++ +   ++ 
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828

Query: 346 ALHACADLGD 355
            ++A A   D
Sbjct: 829 NMYAAASKWD 838



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 5/196 (2%)

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
           DL  G   H  +   +   +  + N+LISMYSKC  +  A  +F K+  + LVSWN+++ 
Sbjct: 54  DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113

Query: 415 GYAQNGR-----VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
            YAQ+       + +A   F  +R   +     T+  ++        +  ++  H    +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
              + + FV  AL+++Y K G V   + LF+ M  R V  WN+M+  Y   G  + A++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233

Query: 530 FNKMLEGPTKPNDITF 545
            +        PN+IT 
Sbjct: 234 SSAFHSSGLNPNEITL 249



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 5/195 (2%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L +GK  H   +    +    +   L+ MY+KCG +  AR VFD M  R++VSWNS++AA
Sbjct: 55  LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114

Query: 315 YVEGG-----NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           Y +       N ++A  +F+ +    V  + +T+   L  C   G +      H    ++
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            L  D  +  +L+++Y K  KV     +F ++  + +V WN M+  Y + G   EA++  
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234

Query: 430 CKMRSKNIKPDSFTM 444
               S  + P+  T+
Sbjct: 235 SAFHSSGLNPNEITL 249



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 15/169 (8%)

Query: 460 AKWIHALVIRSCFEKNV--FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
            K  HA ++   FE+N   F++  LI MY+KCG++  AR +FD M +R + +WN ++  Y
Sbjct: 58  GKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115

Query: 518 GTHGLG-----KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKK 570
                      + A  LF  + +     + +T    +  C HSG V   E  H +     
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
             G E V    GA+V++  + G++ E     ++MP    + ++  ML A
Sbjct: 176 LDGDEFVA---GALVNIYLKFGKVKEGKVLFEEMPYRD-VVLWNLMLKA 220


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/686 (36%), Positives = 390/686 (56%), Gaps = 15/686 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C + G +   + +HG +   G S D+F  T +VN Y +C    +A ++FD MP
Sbjct: 81  YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++V+W  +V G+  N    L L++   M E GR     T+ + L A      + +GK 
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHGYA++ G +SI ++  +L  +YAK G +++A   F  +  +NV++W +MI+A  E   
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260

Query: 321 PEE-AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             E  M +F  ML  GV P   T+   +  C    DL  G  V     ++   T++ + N
Sbjct: 261 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----------NGRVNEALNY 428
           S + +Y +  + D A  +F +++  ++++WNAMI GYAQ             R  +AL  
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  ++   +KPD FT  S++   + +  +   + IHA  I+S F  +V V +AL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A   F  M  R   TW  MI GY  HG  + A++LF +M     +PN+ITF+  
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACS++GLVEE  HYF  +KK+Y IEPV+DHYG M+D+  R GR+ +A+ FI++   EP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++ +++  C+ H N+EL   AA++L EL P     ++LL N+Y +   W  +A+VR 
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           +M+++ +      S + +K++V+ F +    HPQ+  +Y  LE L+++ KA GY P  N+
Sbjct: 621 LMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNA 680

Query: 729 -IHDVEDYVQE--NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            + D ED  +     L  HSE+LA+A GLL + PG+T+ + KN+ +C DCH++ K  SL+
Sbjct: 681 ELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLL 740

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDY 811
             REIIVRD  R H FK+G CSCGD+
Sbjct: 741 ENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 243/506 (48%), Gaps = 16/506 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL   R +   + K+G        T LV+ + + ++  DA R+F+ +P++    +  ++ 
Sbjct: 93  SLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVT 152

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY   +     +   + M      P  Y     L  C    ++  GK++HG  I  G   
Sbjct: 153 GYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRM 230
                  + ++YAK G ++ A + F R+PE+++++W T+++  A++    EL + L   M
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM 272

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +G   +  T+ S++        L +GK V  ++ + G ++ + V  + + +Y + G  
Sbjct: 273 LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGET 332

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE-----------EAMRIFQKMLDQGVEPT 339
           + A  +F+ M+  ++++WN+MI+ Y +  +             +A+ IF+ +    ++P 
Sbjct: 333 DEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPD 392

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C+ +  LE+G  +H    +    +DV + ++L++MY+KC  +  A   F 
Sbjct: 393 LFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFL 452

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           ++  +T V+W +MI GY+Q+G+  EA+  F +MR   ++P+  T VS++ A +   ++  
Sbjct: 453 EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEE 512

Query: 460 AK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGY 517
           A+ +   +    C E  V     +IDM+ + G V  A +       E +   W+ ++ G 
Sbjct: 513 AEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGC 572

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDI 543
            +HG  + A    +K+LE   KP  I
Sbjct: 573 RSHGNMELAFYAADKLLE--LKPKGI 596



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 207/440 (47%), Gaps = 24/440 (5%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  EG+       V +L      GSL   +AVHG+  + G  + + V+T+LV+ Y +C  
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              AR +FDGM  RNVV+W +++  Y     P   + +F +ML+ G  P++ T+   L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C    D++ G  VH    +    +  SM NSL S+Y+K   +D A   F ++  K +++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 410 NAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
             MI   A++    E  ++ F  M    + P+ FT+ SV+        +   K + A   
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG---------- 518
           +   E N+ V  + + +Y + G    A  LF+ M +  + TWN MI GY           
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 519 -THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIE 575
                G  A+ +F  +     KP+  TF   +S CS    +E+G  IH  T +K  +  +
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT-IKSGFLSD 427

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVELGEK 631
            V++   A+V++  + G + +A     +MP    +T + +M+     H    + ++L E+
Sbjct: 428 VVVN--SALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSMISGYSQHGQPQEAIQLFEE 484

Query: 632 AANRLFELDPDEGGYHVLLA 651
              RL  + P+E  +  LL+
Sbjct: 485 M--RLAGVRPNEITFVSLLS 502



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 31/326 (9%)

Query: 69  CDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF--ASLDD---- 121
           C+ +L  +   + L+ +     +A R+FE + D     ++ M+ GYA+   ++ DD    
Sbjct: 312 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 371

Query: 122 -----AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A++    ++   + P ++ ++ +L VC  +  + +G++IH Q I +GF  D+   
Sbjct: 372 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 431

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +VNMY KCG I++A K F  MP R  V+W ++++G++Q+G  + A+ L   M   G R
Sbjct: 432 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 491

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAG---FDSIVNVSTALVDMYAKCGRVETA 293
            + IT VS+L A +  G   + +A H + M       + +V+    ++DM+ + GRVE A
Sbjct: 492 PNEITFVSLLSACSYAG--LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 549

Query: 294 RLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD---QGVEPTNVTIMEA 346
              F  +K      N   W+S++A     GN E A     K+L+   +G+E T + ++  
Sbjct: 550 ---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE-TYILLLNM 605

Query: 347 LHACADLGDLERGIFVHKLLDQLKLG 372
             +     D+ R   V KL+ Q  +G
Sbjct: 606 YISTERWQDVAR---VRKLMKQEDVG 628


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/681 (37%), Positives = 397/681 (58%), Gaps = 4/681 (0%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P V     +L VC    EI  GK +HG  +      +L     +++MY+KCG I  A  +
Sbjct: 40  PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 99

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVG 253
           F     +++VSWNT+V GF+  G      D++ +M   G   + D +TI++ +P   +  
Sbjct: 100 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 159

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L   K +H Y+++  F     V+ A V  YAKCG +  A+ VF G++S+ V SWN++I 
Sbjct: 160 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 219

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            + +  +P  ++    +M   G+ P + T+   L AC+ L  L  G  VH  + +  L  
Sbjct: 220 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 279

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D+ +  S++S+Y  C ++     +F  ++ K+LVSWN +I GY QNG  + AL  F +M 
Sbjct: 280 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
              I+    +M+ V  A + L  +R  +  HA  ++   E + F+  +LIDMYAK G++ 
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            +  +F+ + E+   +WN MI GYG HGL K A++LF +M      P+D+TFL  ++AC+
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 459

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI-QKMPIEPGITV 612
           HSGL+ EG+ Y   +K  +G++P + HY  ++D+LGRAG+L++A   + ++M  E  + +
Sbjct: 460 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 519

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           + ++L +C+IH+N+E+GEK A +LFEL+P++   +VLL+N+YA    W+ + KVR  M +
Sbjct: 520 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 579

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
             L+K  GCS +EL  +V SF  G       + I +    L  +I   GY PDT S+ HD
Sbjct: 580 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 639

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           + +  +   L  HSEKLA+ +GL+ +S G+TI + KNLR+C DCHNA K IS V  REI+
Sbjct: 640 LSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIV 699

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD  RFH FKNGVCSCGDYW
Sbjct: 700 VRDNKRFHHFKNGVCSCGDYW 720



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 204/358 (56%), Gaps = 6/358 (1%)

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVANVGSLRI 257
           R+ VSWN+++  F+ NGF+E +  L+  M EE   G F+    T+V++LP  A    + +
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK VHG+A++   D  + ++ AL+DMY+KCG +  A+++F    ++NVVSWN+M+  +  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 318 GGNPEEAMRIFQKMLDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            G+      + ++ML  G  V+   VTI+ A+  C     L     +H    + +   + 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+ ++ Y+KC  +  A  +F  ++ KT+ SWNA+I G+AQ+     +L+   +M+  
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            + PDSFT+ S++ A ++L  +R  K +H  +IR+  E+++FV  +++ +Y  CG + T 
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           +ALFD M ++ + +WN +I GY  +G    A+ +F +M+    +   I+ +    ACS
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 186/353 (52%), Gaps = 10/353 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SLKEL       +K       L     V+ + K  SLS A RVF  I  K    ++ ++ 
Sbjct: 163 SLKELH---CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 219

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G+A+      ++   ++M+   + P  +    LL  C  +  +R GKE+HG +I N    
Sbjct: 220 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 279

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           DLF    V+++Y  CG++     +FD M ++ LVSWNT++ G+ QNGF + AL +  +M 
Sbjct: 280 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G +   I+++ +  A + + SLR+G+  H YA++   +    ++ +L+DMYAK G + 
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            +  VF+G+K ++  SWN+MI  Y   G  +EA+++F++M   G  P ++T +  L AC 
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 459

Query: 352 DLGDLERGIFVHKLLDQLK----LGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             G +  G+   + LDQ+K    L  ++     +I M  +  ++D+A  + ++
Sbjct: 460 HSGLIHEGL---RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 509



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 11/337 (3%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C+ LK LR    +   II++ L         ++SL+     L     +F+ + DK 
Sbjct: 252 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 311

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ GY +    D A+    +M    +     +   +   C  +  +R G+E H 
Sbjct: 312 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 371

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             + +    D F    +++MYAK G I ++ K+F+ + E+   SWN ++ G+  +G A+ 
Sbjct: 372 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 431

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TAL 280
           A+ L   M   G   D +T + +L A  + G +  G   +   M++ F    N+     +
Sbjct: 432 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG-LRYLDQMKSSFGLKPNLKHYACV 490

Query: 281 VDMYAKCGRVETA-RLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE- 337
           +DM  + G+++ A R+V + M    +V  W S++++     N E   ++  K+ +   E 
Sbjct: 491 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 550

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           P N  ++  L+  A LG  E    V + ++++ L  D
Sbjct: 551 PENYVLLSNLY--AGLGKWEDVRKVRQRMNEMSLRKD 585


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/561 (43%), Positives = 356/561 (63%), Gaps = 6/561 (1%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L+ G+A+H +   + F+  + +   +++MYAKCG +E A+ +FD M ++++VSW  +I+ 
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y + G   EA+ +F KML  G +P   T+   L A         G  +H     LK G D
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAF--SLKYGYD 238

Query: 375 --VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
             V + +SL+ MY++   +  A  IF+ L  K +VSWNA+I G+A+ G     +  F +M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             +  +P  FT  SV  A A    +   KW+HA VI+S  +   ++   LIDMYAK G++
Sbjct: 299 LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 358

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+ +F  + ++ + +WN +I GY  HGLG  A++LF +ML+   +PN+ITFL  ++AC
Sbjct: 359 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SHSGL++EG +YF  +KK + IE  + H+  +VDLLGRAGRLNEA  FI++MPI+P   V
Sbjct: 419 SHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 477

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA+LG+C++HKN++LG  AA ++FELDP + G HVLL+NIYA+A      AKVR +M++
Sbjct: 478 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 537

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDV 732
            G++K P CS VE++NEVH F +    HP  + I    E +  +IK  GYVPDT+ +   
Sbjct: 538 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 597

Query: 733 EDYVQENL-LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
            +     L L  HSEKLA+AF +L + PG TI I+KN+R+CGDCH+A K+ S V GREII
Sbjct: 598 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 657

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFH F +G+CSC DYW
Sbjct: 658 VRDTNRFHHFLHGMCSCRDYW 678



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 209/362 (57%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ +L  C  + ++++G+ IH  +  + F  DL  +  ++NMYAKCG +EEA  +FD+MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +D+VSW  +++G++Q+G A  AL L  +M   G + +  T+ S+L A     S   G+ 
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H ++++ G+D  V+V ++L+DMYA+   +  A+++F+ + ++NVVSWN++IA +   G 
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E  MR+F +ML QG EPT+ T      ACA  G LE+G +VH  + +        + N+
Sbjct: 288 GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 347

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY+K   +  A  +F +L  + +VSWN++I GYAQ+G   EAL  F +M    ++P+
Sbjct: 348 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 407

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             T +SV+ A +   ++   ++   L+ +   E  V     ++D+  + G +  A    +
Sbjct: 408 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467

Query: 501 MM 502
            M
Sbjct: 468 EM 469



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 197/372 (52%), Gaps = 4/372 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT L++L   R I   I  S   D  +    +++++ K  SL +A  +F+ +P K 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GY++     +A++   +M +    P  +  + LLK  G       G+++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G+ +++   + +++MYA+   + EA  +F+ +  +++VSWN ++AG A+ G  E 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            + L  +M  +G      T  S+  A A+ GSL  GK VH + +++G   I  +   L+D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G ++ A+ VF  +  +++VSWNS+I+ Y + G   EA+++F++ML   V+P  +T
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+  G L+ G +  +L+ + K+   V+   +++ +  +  +++ A     ++ 
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 470

Query: 403 GK-TLVSWNAMI 413
            K T   W A++
Sbjct: 471 IKPTAAVWGALL 482


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/760 (35%), Positives = 407/760 (53%), Gaps = 10/760 (1%)

Query: 57   RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAK 115
            R+    I +SG     +    ++S++ K    S A  VF  I  K D + ++TML     
Sbjct: 355  RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASED 414

Query: 116  FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLF 174
              S    V+    M    + P   ++  +L  C +   +  G++IH  ++      ++  
Sbjct: 415  RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 175  AMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
              T +V+MY KCG I EA  +F  MP   R LV+WN ++  +AQN  ++ A   +  M +
Sbjct: 475  VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534

Query: 233  EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
             G   D ++  S+L +       ++ +      + +G+ S   + TAL+ M+ +C  +E 
Sbjct: 535  GGVLPDALSFTSVLSSCYCSQEAQVLRMC---ILESGYRSAC-LETALISMHGRCRELEQ 590

Query: 293  ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
            AR VFD M   +VVSW +M++A  E  + +E   +F++M  +GV P   T+   L  C D
Sbjct: 591  ARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLD 650

Query: 353  LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
               L  G  +H  + ++ L  D+++ N+L++MYS C     A   F  ++ + LVSWN M
Sbjct: 651  STTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 413  ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
               YAQ G   EA+  F  M+ + +KPD  T  + +      +++   K  H L   S  
Sbjct: 711  SAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGL 770

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
            + +V V T L+ +YAKCG +  A +LF    +  V   N +I     HG  + AV++F K
Sbjct: 771  DSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWK 830

Query: 533  MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
            M +   +P+  T +  ISAC H+G+VEEG   F ++K+ +GI P ++HY   VDLLGRAG
Sbjct: 831  MQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAG 890

Query: 593  RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
            +L  A   I+KMP E    V+ ++LG CK+  + ELGE+ A R+ ELDP     HV+L+N
Sbjct: 891  QLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSN 950

Query: 653  IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
            IY A   W      R  +  + ++  PG S +E+  +VH F +G   HPQ+  IY  L+ 
Sbjct: 951  IYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDK 1010

Query: 713  LIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
            L   ++ AGY  D     D ED ++E  L  HSE++AIAFGL+ + P +T+ I KNLRVC
Sbjct: 1011 LELLMRRAGYEADKG--LDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVC 1068

Query: 773  GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GDCH ATKYIS++ GREIIVRD  RFH F NG CSC D W
Sbjct: 1069 GDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/503 (33%), Positives = 266/503 (52%), Gaps = 23/503 (4%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEE 191
           D A  +  YT LL+ C D  ++ +GK  H +LI N G    LF    ++NMY +CG +EE
Sbjct: 20  DRAADLQEYTALLQSCVDSNDLAKGKRAH-ELIANAGLEQHLFLGNCLINMYVRCGSLEE 78

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           A+ +F +M ER++VSW  +++  AQ+G FA       T + E     +  T+V++L A A
Sbjct: 79  AHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACA 138

Query: 251 NVGSLRIGKAVHGYAMRAGFD----SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           N   L IG+++H      G +    +   V  A+++MYAKCG  E A  VF  +  ++VV
Sbjct: 139 NSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVV 198

Query: 307 SWNSMIAAYV-EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           SW +M  AY  E     +A+RIF++ML Q + P  +T + AL AC  L D   G ++H L
Sbjct: 199 SWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL 255

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT---LVSWNAMILGYAQNGRV 422
           L +  LG D    N+LI+MY KC   + A  +F  +  +    LVSWNAMI    + GR 
Sbjct: 256 LHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRH 315

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTA 481
            +A+  F ++R + ++P+S T+++++ ALA   V    A+  H  +  S + ++V V  A
Sbjct: 316 GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNA 375

Query: 482 LIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +I MYAKCG    A  +F  +  +  V +WN M+            V  F+ ML     P
Sbjct: 376 IISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435

Query: 541 NDITFLCAISACSHSGLVEEG--IHYFT-SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           N ++F+  ++ACS+S  ++ G  IH    + ++DY    V      +V + G+ G + EA
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT---MLVSMYGKCGSIAEA 492

Query: 598 WDFIQKMPIEP-GITVFGAMLGA 619
               ++MP+    +  +  MLGA
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 167/578 (28%), Positives = 276/578 (47%), Gaps = 30/578 (5%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQH----LFQTKLVSLFCKYNSLSDAARVFEPI 98
           +L  C + ++L   R I  +I + GL  +     L    +++++ K  S  DA  VF  I
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTI 192

Query: 99  PDKLDALYHTMLKGYAKFASL-DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           P+K    +  M   YA+      DA+     M    +AP V  +   L  C     +R G
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG 249

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGF 214
             +H  L   G   D  A   ++NMY KCG  E AY +F  M  R   DLVSWN +++  
Sbjct: 250 TWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISAS 309

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSI 273
            + G    A+ +  R+  EG R + +T+++IL A+A  G      +  HG    +G+   
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRD 369

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           V V  A++ MYAKCG    A  VF  ++ + +V+SWN+M+ A  +  +  + +  F  ML
Sbjct: 370 VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML 429

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKV 391
             G++P  V+ +  L+AC++   L+ G  +H L L + +   + S+   L+SMY KC  +
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSI 489

Query: 392 DRAADIFSK--LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
             A  +F +  L  ++LV+WN M+  YAQN R  EA     +M    + PD+ +  SV  
Sbjct: 490 AEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV-- 547

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
            L+     + A+ +   ++ S + ++  + TALI M+ +C  +  AR++FD M+   V +
Sbjct: 548 -LSSCYCSQEAQVLRMCILESGY-RSACLETALISMHGRCRELEQARSVFDEMDHGDVVS 605

Query: 510 WNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT 566
           W  M+     +   K    LF +M LEG   P+  T    +  C  S  +  G  IH   
Sbjct: 606 WTAMVSATAENRDFKEVHHLFRRMQLEGVI-PDKFTLATTLDTCLDSTTLGLGKIIHACV 664

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           +   + G+E  +    A++++    G   EA  F + M
Sbjct: 665 T---EIGLEADIAVENALLNMYSNCGDWREALSFFETM 699


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/721 (34%), Positives = 409/721 (56%), Gaps = 8/721 (1%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K G C +      +++L+ +  S   A RVF  +P +    ++T++ G+A+    + A+ 
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M++  ++P     + LL  C  +G++++G ++H  L   G S D      ++++Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG +E A  +F+     ++V WN ++  F Q      + +L  +M   G R +  T   
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL        + +G+ +H  +++ GF+S + VS  L+DMY+K G +E AR V + +K ++
Sbjct: 351 ILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSW SMIA YV+    ++A+  F++M   G+ P N+ +  A+  CA +  + +G+ +H 
Sbjct: 411 VVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            +       DVS+ N+L+++Y++C ++  A   F +++ K  ++ N ++ G+AQ+G   E
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M    +K + FT VS + A A L+ I+  K IHA VI++       V  ALI 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y KCG+   A+  F  M+ER+  +WN +I     HG G  A++LF++M +   KPND+T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  ++ACSH GLVEEG+ YF S+  +YGI P  DHY  ++D+ GRAG+L+ A  FI++M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           PI     V+  +L ACK+HKN+E+GE AA  L EL+P +   +VLL+N YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR +M  +G++K PG S +E+KN VH+F+ G   HP +++IY FL  + D +   GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +   + HD E   ++     HSEKLA+ FGL++  P   + + KNLRV        KY S
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV-------EKYTS 883

Query: 784 L 784
           L
Sbjct: 884 L 884



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 286/559 (51%), Gaps = 7/559 (1%)

Query: 44  ALLLEVCTSLKELRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A  L  C       +++P I    +  GL    +    L+ L+ K   +  A RVFE + 
Sbjct: 45  ACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELS 104

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + +  +  ML GYA+    ++A+    +M    V P  Y  + +L  C       +G+ 
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL 164

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH Q   +GF  ++F    V+ +Y +CG    A ++F  MP RD V++NT+++G AQ G 
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL++   M   G   D +TI S+L A A++G L+ G  +H Y  +AG  S   +  +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y KCG VETA ++F+     NVV WN M+ A+ +  +  ++  +F +M   G+ P 
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C    +++ G  +H L  +    +D+ ++  LI MYSK   +++A  +  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L+ K +VSW +MI GY Q+    +AL  F +M+   I PD+  + S I   A ++ +R 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IHA +  S +  +V +  AL+++YA+CG +  A + F+ M  +   T N ++ G+  
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQ 524

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
            GL + A+++F +M +   K N  TF+ A+SA ++   +++G   +   +K  +  E  +
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEV 584

Query: 579 DHYGAMVDLLGRAGRLNEA 597
            +  A++ L G+ G   +A
Sbjct: 585 GN--ALISLYGKCGSFEDA 601



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 239/461 (51%), Gaps = 4/461 (0%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C SL +L++   L   + K+G+   ++ +  L+ L+ K   +  A  +F       
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ ML  + +   L  +     +M+   + P  + Y  +L+ C    EI  G++IH 
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF  D++    +++MY+K G +E+A ++ + + E+D+VSW +++AG+ Q+   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL     M + G   D I + S +   A + ++R G  +H     +G+   V++  ALV+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YA+CGR+  A   F+ M+ ++ ++ N +++ + + G  EEA+++F +M   GV+    T
Sbjct: 490 LYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFT 549

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            + AL A A+L ++++G  +H  + +     +  + N+LIS+Y KC   + A   FS++ 
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS 609

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
            +  VSWN +I   +Q+GR  EAL+ F +M+ + IKP+  T + V+ A + + ++     
Sbjct: 610 ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLS 669

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +  ++               +ID++ + G +  A+   + M
Sbjct: 670 YFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/659 (38%), Positives = 379/659 (57%), Gaps = 38/659 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ + E +L+ WNT++ G A +     AL++  RM   G   +  +   +L + A 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE-------------------- 291
             +   G+ +H   ++ G      V T+L+ MYA+ G +E                    
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 292 -----------TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
                      +AR VFD +  R+VVSWN+MI  YVE G  EEA+ +F++M+   V P  
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLK----LGTDVSMTNSLISMYSKCKKVDRAAD 396
            T++  + ACA  G +E G  VH  +D         + + + N+LI +YSKC  V+ A  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  L  K +VSWN +I GY       EAL  F +M      P+  T++SV+PA A L  
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316

Query: 457 IRYAKWIHALVIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           I   +WIH  + +          + T+LIDMYAKCG +  A  +F+ M  R +++WN MI
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            G+  HG   AA +LF++M     +P+DITF+  +SACSHSGL++ G   F S+ +DY +
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
            P ++HYG M+DLLG +G   EA + I  MP+EP   ++ ++L ACK H N+EL E  A 
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           +L +++P+  G +VLL+NIYA A  W+ +A+VR ++  KG++K PGCS +E+ + VH F 
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFI 556

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
            G   HP+ + IY  LE +  +++ AG+ PDT+ +  ++E+  +E  L  HSEKLAIAFG
Sbjct: 557 IGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 616

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+++ PG+ + I KNLRVC +CH ATK IS +  REI+ RD  RFH F++GVCSC DYW
Sbjct: 617 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/555 (30%), Positives = 273/555 (49%), Gaps = 84/555 (15%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ L  A  VFE I +    +++TML+G+A  +    A+   +RM      P  Y++ +L
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE------------- 191
           LK C        G++IH Q++  G  LD +  T +++MYA+ G +E+             
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 192 ------------------AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                             A K+FD + ERD+VSWN ++ G+ +NG  E AL+L   M   
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA----GFDSIVNVSTALVDMYAKCGR 289
             R D  T+VS++ A A  GS+ +G+ VH +        GF S + +  AL+D+Y+KCG 
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           VETA  +F+G+  ++VVSWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310

Query: 350 CADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           CA LG ++ G ++H  +D+   G   + S+  SLI MY+KC  ++ A  +F+ +  ++L 
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SWNAMI G+A +GR N A + F +MR   ++PD  T V ++ A +               
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSH-------------- 416

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGL 522
                       + L+D+          R +F  M + +  T     +  MID  G  GL
Sbjct: 417 ------------SGLLDL---------GRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGL 455

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HY 581
            K A E+ + M   P +P+ + +   + AC   G +E    +   L K   IEP     Y
Sbjct: 456 FKEAEEMIHTM---PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIK---IEPENSGSY 509

Query: 582 GAMVDLLGRAGRLNE 596
             + ++   AGR  +
Sbjct: 510 VLLSNIYATAGRWED 524



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++ +        A +VF+ I ++    ++ M+ GY +    ++A+     M   +V 
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQL----IVNGFSLDLFAMTGVVNMYAKCGQIEE 191
           P       ++  C   G I  G+++H  +      +GFS  L  +  ++++Y+KCG +E 
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A+ +F+ +  +D+VSWNT++ G+      + AL L   M   G   + +T++S+LPA A+
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 252 VGSLRIGKAVHGYAMR--AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           +G++ IG+ +H Y  +   G  +  ++ T+L+DMYAKCG +E A  VF+ M  R++ SWN
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLERGIF 361
           +MI  +   G    A  +F +M    VEP ++T +  L AC+  G  DL R IF
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 7/220 (3%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           G+ ++   +T L+ ++ K   +  A +VF  +  +  + ++ M+ G+A     + A    
Sbjct: 333 GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLF 392

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAK 185
            RMR + V P    +  LL  C   G +  G++I   +  +   +  L     ++++   
Sbjct: 393 SRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGH 452

Query: 186 CGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITI 242
            G  +EA +M   MP E D V W +++    ++G  ELA     ++   E    G ++ +
Sbjct: 453 SGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLL 512

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            +I    A  G       V G     G   +   S+  VD
Sbjct: 513 SNIY---ATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/570 (42%), Positives = 356/570 (62%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S++ A A   SL   +A+H +   + F   V +  +L+ +Y KCG V  AR VFDGM +R
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++ SW S+IA Y +   P+EA+ +   ML    +P   T    L A         G  +H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C ++D A  +F +L+ K  VSWNA+I G+A+ G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
             L  F +M+    +   FT  SV  A+A +  +   KW+HA +I+S    + FV   ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +FD ++++ V TWN M+  +  +GLG+ AV  F +M +     N I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFL  ++ACSH GLV+EG  YF  + K+Y +EP +DHY  +VDLLGRAG LN+A  FI K
Sbjct: 369 TFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP++P   V+GA+LG+C++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   WD  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE++N VH F +    HP+S+ IY   E +  +I+ AGYV
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P+T+ +   V++  ++  L  HSEK+A+AF L+N   G+TI I KN+R+CGDCH+A +YI
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYI 607

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V  REI+VRD +RFH F +G CSCGDYW
Sbjct: 608 SKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 199/377 (52%), Gaps = 5/377 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  L+  C     +   + IH  L  + F+  +F    ++++Y KCG + +A ++FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD+ SW +++AG+AQN   + AL L+  M     + +  T  S+L A     S  IG+ 
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   ++  +   V V +AL+DMYA+CGR++ A  VFD ++S+N VSWN++IA +   G+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS--MT 378
            E  + +F +M   G E T+ T      A A +G LE+G +VH  +  +K G  +S  + 
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAFVG 304

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+++ MY+K   +  A  +F ++  K +V+WN+M+  +AQ G   EA+ +F +MR   + 
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA- 497
            +  T +S++ A +   +++  K    ++     E  +     ++D+  + G +  A   
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 498 LFDMMNERHVTTWNVMI 514
           +F M  +     W  ++
Sbjct: 425 IFKMPMKPTAAVWGALL 441



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 188/372 (50%), Gaps = 4/372 (1%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C    SL + R I   +  S           L+ L+CK  +++DA RVF+ +P + 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +++ GYA+    D+A+  L  M      P  + +  LLK  G       G++IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +   +  D++  + +++MYA+CG+++ A  +FD++  ++ VSWN ++AGFA+ G  E 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +   M   G      T  S+  A+A +G+L  GK VH + +++G      V   ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  AR VFD +  ++VV+WNSM+ A+ + G   EA+  F++M   GV    +T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+  G ++ G     ++ +  L  ++    +++ +  +   ++ A     K+ 
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 403 GK-TLVSWNAMI 413
            K T   W A++
Sbjct: 430 MKPTAAVWGALL 441


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/643 (39%), Positives = 392/643 (60%), Gaps = 13/643 (2%)

Query: 174 FAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           F  + ++ +Y+  K   +  A  +FDR+  R L+ WNTI+  + +N F+   + L   + 
Sbjct: 46  FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV 105

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            E    +F T+  ++   A +G ++ GK +HG A++ GF S V V  +LV+MY+KCG ++
Sbjct: 106 HEYLPDNF-TLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEID 164

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR VFDGM  ++VV WNS+I  Y   G  + A+++F++M ++      V +++ L  C 
Sbjct: 165 CARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTV-LVDGLSKC- 222

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
             G +E      KL DQ+     VS  N++I+ Y K    D A ++F ++    LV+WN 
Sbjct: 223 --GKVESA---RKLFDQMPCRNLVSW-NAMINGYMKSGDFDSALELFYQMPIWDLVTWNL 276

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI GY  NG+  +A+  F  M     +P   T+VSV+ A++ L+V+   +WIH+ + ++ 
Sbjct: 277 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 336

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           FE +  + T+LI+MYAKCG + +A  +F  + ++ V  W  +I G G HG+   A+ LF 
Sbjct: 337 FELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFL 396

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M +   KPN I F+  ++AC+H+GLV++G  YF  +  +Y IEP ++HYG +VD+L RA
Sbjct: 397 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 456

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G L EA + I+ MPI P   ++ ++LG  + H  +++GE AA R+ E+ P+  G ++LL+
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLS 516

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           N+YAA+ MW+K++ VR +M K+G +K PGCS VE K  +H F  G   HPQ+K IY  + 
Sbjct: 517 NMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMS 576

Query: 712 TLIDEIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
            + +++K  G+VPDT  +      +  +E  L +HSE+LAIAFGL+N  PG  I I KNL
Sbjct: 577 EMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNL 636

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVC DCH+ TK +S +  REIIVRD  RFH FKNG CSC DYW
Sbjct: 637 RVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 266/579 (45%), Gaps = 90/579 (15%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFC--KYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +E+ ++    +K+ + +     ++L++L+   K N L  A  +F+ I  +    ++T++K
Sbjct: 27  QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y +     D +     + ++ + P  +    ++K C  +G ++ GK+IHG  +  GF  
Sbjct: 87  CYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 145

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+F    +VNMY+KCG+I+ A K+FD M ++D+V WN+++ G+A+ G  ++AL L   M 
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP 205

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E                                  R  F       T LVD  +KCG+VE
Sbjct: 206 E----------------------------------RDAFS-----WTVLVDGLSKCGKVE 226

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK--------------------- 330
           +AR +FD M  RN+VSWN+MI  Y++ G+ + A+ +F +                     
Sbjct: 227 SARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQ 286

Query: 331 ----------MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
                     ML  G  P++ T++  L A + L  L +G ++H  +++     D  +  S
Sbjct: 287 FMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTS 346

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY+KC  ++ A  +F  +Q K +  W A+I+G   +G  N AL  F +M    +KP+
Sbjct: 347 LIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPN 406

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALF 499
           +   + V+ A     ++   +    +++     E  +     L+D+  + G +  A+   
Sbjct: 407 AIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTI 466

Query: 500 DMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDI-TFLCAISACSH 554
           + M    +   W  ++ G   HG   +G+ A +   +++E    P  I  ++   +  + 
Sbjct: 467 ENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQ---RVIE--VAPETIGCYILLSNMYAA 521

Query: 555 SGLVEEGIH-----YFTSLKKDYGIEPVMDHYGAMVDLL 588
           SG+ E+  H     Y    +KD G   V +H G + + +
Sbjct: 522 SGMWEKVSHVREMMYKRGFRKDPGCSSV-EHKGTLHEFI 559



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 195/391 (49%), Gaps = 12/391 (3%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           ++E ++I  L +K G       Q  LV+++ K   +  A +VF+ + DK   L+++++ G
Sbjct: 128 VQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG 187

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           YA+   +D A+     M   D     +++T L+      G++   +++  Q+       +
Sbjct: 188 YARCGEIDIALQLFEEMPERDA----FSWTVLVDGLSKCGKVESARKLFDQMPCR----N 239

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           L +   ++N Y K G  + A ++F +MP  DLV+WN ++AG+  NG    A+ +   M +
Sbjct: 240 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 299

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            G R    T+VS+L AV+ +  L  G+ +H Y  + GF+    + T+L++MYAKCG +E+
Sbjct: 300 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIES 359

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  VF  ++ + V  W ++I      G    A+ +F +M   G++P  +  +  L+AC  
Sbjct: 360 ALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNH 419

Query: 353 LGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWN 410
            G ++ G  +   ++++ K+   +     L+ +  +   ++ A +    +      V W 
Sbjct: 420 AGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWM 479

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           +++ G   +G+++  +  +   R   + P++
Sbjct: 480 SLLGGSRNHGKID--IGEYAAQRVIEVAPET 508


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/730 (36%), Positives = 399/730 (54%), Gaps = 87/730 (11%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           +Y +L  A  +F+ +P++    ++ ML GYA+   + +A      M   +      ++  
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI----SWNG 97

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L      G I   +    +L  +    +L +   ++  Y K  ++ +A  +FDRMPERD
Sbjct: 98  MLAAYVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD 153

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
            VSWNT+++G+AQNG     L    R+ EE    D  T                      
Sbjct: 154 EVSWNTMISGYAQNG----ELLEAQRLFEESPVRDVFTW--------------------- 188

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
                         TA+V  Y + G ++ AR VFDGM  +N VSWN++IA YV+    ++
Sbjct: 189 --------------TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQ 234

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A  +F+ M  Q                                       +VS  N++I+
Sbjct: 235 ARELFEAMPCQ---------------------------------------NVSSWNTMIT 255

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            Y++   + +A + F ++  +  +SW A+I GYAQ+G   EAL+ F +M+    + +  T
Sbjct: 256 GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRST 315

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             S +   AE++ +   K +H  V+++  E   +V  AL+ MY KCG +  A  +F+ + 
Sbjct: 316 FTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 375

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           E+ V +WN MI GY  HG GK A+ LF  M +    P+D+T +  +SACSH+GLV++G  
Sbjct: 376 EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE 435

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           YF S+ +DYGI     HY  M+DLLGRAGRL++A + ++ MP EP    +GA+LGA +IH
Sbjct: 436 YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIH 495

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
            N ELGEKAA  +FE++PD  G +VLL+N+YAA+  W  + ++R  M  +G++K PG S 
Sbjct: 496 GNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSW 555

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           VE++N++H+F  G + HP+  RIYTFLE L  ++K  GYV  T  + HDVE+  + ++L 
Sbjct: 556 VEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLK 615

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLA+AFG+L    G  I + KNLRVC DCHNA K+IS + GR II+RD HRFH F 
Sbjct: 616 YHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFN 675

Query: 803 NGVCSCGDYW 812
            G CSCGDYW
Sbjct: 676 GGQCSCGDYW 685



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 47/384 (12%)

Query: 71  QHLFQTK----LVSLFC------KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
           + LF++K    L+S  C      K N L DA  +F+ +P++ +  ++TM+ GYA+   L 
Sbjct: 112 RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 171

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV-----GEIRR-------GKEIHGQLIVNG 168
           +A       R  + +PV   +T+   V G V      E RR          +    I+ G
Sbjct: 172 EA------QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAG 225

Query: 169 F--------SLDLF---------AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           +        + +LF         +   ++  YA+ G I +A   FDRMP+RD +SW  I+
Sbjct: 226 YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAII 285

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           AG+AQ+G+ E AL L   M  +G R +  T  S L   A + +L +GK VHG  ++AG +
Sbjct: 286 AGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLE 345

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S   V  AL+ MY KCG ++ A +VF+G++ + VVSWN+MIA Y   G  +EA+ +F+ M
Sbjct: 346 SGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESM 405

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
              G+ P +VT++  L AC+  G +++G  + + +     +  +      +I +  +  +
Sbjct: 406 KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGR 465

Query: 391 VDRAADIFSKLQGKT-LVSWNAMI 413
           +D A ++   +  +    +W A++
Sbjct: 466 LDDAQNLMKNMPFEPDAATWGALL 489



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 146/288 (50%), Gaps = 10/288 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ + +   ++ A   F+ +P +    +  ++ GYA+    ++A+   + M+ D     
Sbjct: 253 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 312

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +T  L  C ++  +  GK++HG+++  G     +    ++ MY KCG I++AY +F+
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 372

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            + E+++VSWNT++AG+A++GF + AL L   M + G   D +T+V +L A ++ G +  
Sbjct: 373 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432

Query: 258 GKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
           G   + Y+M   +    N    T ++D+  + GR++ A+ +   M    +  +W +++ A
Sbjct: 433 GTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDLER 358
               GN E   +  + + +  +EP N    V +     A    GD+ R
Sbjct: 492 SRIHGNTELGEKAAKMIFE--MEPDNSGMYVLLSNLYAASGRWGDVGR 537



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 18/246 (7%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+ R      L  C  +  L   +++   ++K+GL         L+ ++CK  ++ DA  
Sbjct: 310 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 369

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VFE I +K    ++TM+ GYA+     +A+     M+   + P       +L  C   G 
Sbjct: 370 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429

Query: 154 IRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
           + +G E    +  + G + +    T ++++  + G++++A  +   MP E D  +W  ++
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489

Query: 212 AGFAQNGFAEL---ALDLVTRMHEEGRRGDFITIVSILPAV---ANVGSLRIG------K 259
                +G  EL   A  ++  M E    G ++ + ++  A     +VG +R+       K
Sbjct: 490 GASRIHGNTELGEKAAKMIFEM-EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVK 548

Query: 260 AVHGYA 265
            V GY+
Sbjct: 549 KVPGYS 554


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/570 (43%), Positives = 345/570 (60%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S + A A   +L   + +H +   + F     +  +L+ MY KC  V  AR VFD M+ +
Sbjct: 56  SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++VSW S+IA Y +   P EA+ +   ML    +P   T    L A     D   G  +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C K+D A  +F KL  K  VSWNA+I G+A+ G   
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            AL  F +M     +   FT  SV  ++A L  +   KW+HA VI+S  +   FV   L+
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +FD ++ + + TWN M+  +  +GLGK AV  F +M +     N I
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFLC ++ACSH GLV+EG  YF  + K+Y +EP +DHY  +V LLGRAG LN A  FI K
Sbjct: 356 TFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFK 414

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   V+GA+L AC++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   WD  
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE++N VH F +    HPQ++ IY     +  +I+  GYV
Sbjct: 475 ARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYV 534

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PD + +   V+D  +E  L  HSEKLA+AF L+    G+TI I KN+R+CGDCH+A KYI
Sbjct: 535 PDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V GREI+VRD +RFH F +G CSCGDYW
Sbjct: 595 SKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 198/383 (51%), Gaps = 1/383 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y   +  C     +   ++IH  L  + F+ D F    +++MY KC  + +A
Sbjct: 46  ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD+M  +D+VSW +++AG+AQN     A+ L+  M +   + +  T  S+L A    
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
                G+ +H  A++ G+   V V +AL+DMYA+CG+++ A  VFD + S+N VSWN++I
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + +   G+ E A+  F +ML  G E T+ T      + A LG LE+G +VH  + + +  
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + N+L+ MY+K   +  A  +F ++  K LV+WN+M+  +AQ G   EA+++F +M
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   +  +  T + ++ A +   +++  K    ++     E  +     ++ +  + G +
Sbjct: 346 RKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLL 405

Query: 493 GTARA-LFDMMNERHVTTWNVMI 514
             A   +F M  E     W  ++
Sbjct: 406 NYALVFIFKMPMEPTAAVWGALL 428



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 191/381 (50%), Gaps = 8/381 (2%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+YR      +  C   K L   R+I   +  S           L+ ++CK  S+ DA  
Sbjct: 52  RVYRS----FITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARN 107

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF+ +  K    + +++ GYA+     +A+  L  M      P  + +  LLK  G   +
Sbjct: 108 VFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
              G++IH   +  G+  D++  + +++MYA+CG+++ A  +FD++  ++ VSWN +++G
Sbjct: 168 SGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISG 227

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           FA+ G  E AL     M   G      T  S+  ++A +G+L  GK VH + +++     
Sbjct: 228 FARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLT 287

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
             V   L+DMYAK G +  AR VFD + ++++V+WNSM+ A+ + G  +EA+  F++M  
Sbjct: 288 AFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            GV    +T +  L AC+  G ++ G    +++ +  L  ++    +++++  +   ++ 
Sbjct: 348 SGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNY 407

Query: 394 A-ADIFSKLQGKTLVSWNAMI 413
           A   IF      T   W A++
Sbjct: 408 ALVFIFKMPMEPTAAVWGALL 428



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 1/232 (0%)

Query: 331 MLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +LD G + PT       + ACA   +LE    +H  L   +   D  + NSLI MY KC+
Sbjct: 41  LLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCR 100

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            V  A ++F +++ K +VSW ++I GYAQN    EA+     M     KP+ FT  S++ 
Sbjct: 101 SVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A    +     + IHAL ++  + ++V+V +AL+DMYA+CG +  A A+FD ++ ++  +
Sbjct: 161 AAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           WN +I G+   G G++A+  F +ML    +    T+    S+ +  G +E+G
Sbjct: 221 WNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQG 272


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/673 (37%), Positives = 398/673 (59%), Gaps = 8/673 (1%)

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLD---LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           C DV  +  GK +H Q ++   + +   +  +  +V++Y KCGQ+  A  +FD MP R++
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           VSWN ++AG+   G     L L   M   +    +     + L A ++ G ++ G   HG
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD---GMKSRNVVSWNSMIAAYVEGGN 320
              + G      V +ALV MY++C  VE A  V D   G    ++ S+NS++ A VE G 
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ + ++M+D+ V   +VT +  +  CA + DL+ G+ VH  L +  L  D  + + 
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM 261

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY KC +V  A ++F  LQ + +V W A++  Y QNG   E+LN F  M  +   P+
Sbjct: 262 LIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPN 321

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            +T   ++ A A ++ +R+   +HA V +  F+ +V V  ALI+MY+K G++ ++  +F 
Sbjct: 322 EYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFT 381

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R + TWN MI GY  HGLGK A+++F  M+     PN +TF+  +SA SH GLV+E
Sbjct: 382 DMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKE 441

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G +Y   L +++ IEP ++HY  MV LL RAG L+EA +F++   ++  +  +  +L AC
Sbjct: 442 GFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNAC 501

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            +H+N +LG + A  + ++DP + G + LL+N+YA A  WD +  +R +M ++ ++K PG
Sbjct: 502 HVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPG 561

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S ++++N++H F S  + HP+S +IY  ++ L+  IK  GYVP+  S+ HDVED  +E 
Sbjct: 562 ASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEG 621

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            LS HSEKLA+A+GL+     + I I KNLR+C DCH A K IS VT R IIVRD +RFH
Sbjct: 622 YLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFH 681

Query: 800 CFKNGVCSCGDYW 812
            F++G C+C D+W
Sbjct: 682 HFRDGSCTCLDHW 694



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 241/479 (50%), Gaps = 18/479 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFAS-LDDAVSFLIRMRYDDV 134
             LV L+ K   L  A  +F+ +P +    ++ ++ GY    + L+  V F   +   + 
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P  Y +T  L  C   G ++ G + HG L   G     +  + +V+MY++C  +E A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 195 MFDRMPER---DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           + D +P     D+ S+N+++    ++G  E A++++ RM +E    D +T V ++   A 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 252 VGSLRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           +  L++G  VH   +R G  FD    V + L+DMY KCG V  AR VFDG+++RNVV W 
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEF--VGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +++ AY++ G  EE++ +F  M  +G  P   T    L+ACA +  L  G  +H  +++L
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
                V + N+LI+MYSK   +D + ++F+ +  + +++WNAMI GY+ +G   +AL  F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAK 488
             M S    P+  T + V+ A + L +++    +++ L+     E  +   T ++ + ++
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471

Query: 489 CGAVGTARALFDMMNER-HVTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDI 543
            G +  A         +  V  W  +++    H    LG+   E   +M      P+D+
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQM-----DPHDV 525



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 194/366 (53%), Gaps = 5/366 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP-DKLDAL--YHTM 109
           +KE  +   L+ K GL      ++ LV ++ + + +  A +V + +P + ++ +  Y+++
Sbjct: 133 VKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSV 192

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L    +    ++AV  L RM  + VA     Y  ++ +C  + +++ G  +H +L+  G 
Sbjct: 193 LNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGL 252

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             D F  + +++MY KCG++  A  +FD +  R++V W  ++  + QNG+ E +L+L T 
Sbjct: 253 MFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTC 312

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  EG   +  T   +L A A + +LR G  +H    + GF + V V  AL++MY+K G 
Sbjct: 313 MDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGS 372

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++++  VF  M  R++++WN+MI  Y   G  ++A+++FQ M+     P  VT +  L A
Sbjct: 373 IDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSA 432

Query: 350 CADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLV 407
            + LG ++ G  +++ L+   K+   +     ++++ S+   +D A +     Q K  +V
Sbjct: 433 YSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVV 492

Query: 408 SWNAMI 413
           +W  ++
Sbjct: 493 AWRTLL 498


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 291/855 (34%), Positives = 461/855 (53%), Gaps = 59/855 (6%)

Query: 5   SQCQLSV--FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL 62
           +QC  S+    +   T T H +    S      S I R+  +     C S +E R +   
Sbjct: 71  NQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGS-----CCS-EEARELHLQ 124

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            IK G          L++++ +   L  A ++F+ + ++    +  ++ GY +    D+A
Sbjct: 125 SIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEA 184

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            +    M      P  Y +   L+ C + G    + G +IHG +    +  D+     ++
Sbjct: 185 CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 244

Query: 181 NMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG----- 234
           +MY  C     +A  +FD +  R+ +SWN+I++ +++ G A  A DL + M +EG     
Sbjct: 245 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 304

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVSTALVDMYAKCGRVETA 293
           +  D  +  S+L         R G+ VH + +R G  D+ V +   LV+MYAK G +  A
Sbjct: 305 KPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 359

Query: 294 RLVFDGMKSRNVVSWNSMI-----------AAYVEGGNPE-------------------- 322
             VF+ M  ++ VSWNS+I           AA +    PE                    
Sbjct: 360 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASV 419

Query: 323 -EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            +A++ F +M+  G   + VT +  L A + L   E    +H L+ +  L  D ++ N+L
Sbjct: 420 SQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNAL 479

Query: 382 ISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +S Y KC +++    IF+++ + +  VSWN+MI GY  N  +++A++    M  K  + D
Sbjct: 480 LSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD 539

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           SFT  +++ A A ++ +     +HA  IR+C E +V V +AL+DMY+KCG +  A   F+
Sbjct: 540 SFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFE 599

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           +M  R+V +WN MI GY  HG G+ A++LF +M+     P+ +TF+  +SACSH G VEE
Sbjct: 600 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEE 659

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  +F S+ + Y + P ++H+  MVDLLGRAG+L+E  DFI  MP++P + ++  +LGAC
Sbjct: 660 GFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGAC 719

Query: 621 --KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
                +N ELG +AA  L EL+P     +VLLAN+YA+   W+ +AK RT M++  ++K 
Sbjct: 720 CRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKE 779

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQ 737
            GCS V +K+ VH F +G   HP+   IY  L  L  +++ AGY+P T  ++ D+E   +
Sbjct: 780 AGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENK 839

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E LLS HSEK+A+AF +L       I I KNLRVCGDCH+A  YIS + GR+I++RD +R
Sbjct: 840 EELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNR 898

Query: 798 FHCFKNGVCSCGDYW 812
           FH F++G CSCGDYW
Sbjct: 899 FHHFEDGKCSCGDYW 913


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 375/643 (58%), Gaps = 38/643 (5%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
            WN ++  + +      AL++  ++ +     D     S+L A   V   ++GK +HG+ 
Sbjct: 91  QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           ++ G D  V V  AL+ MY +C  VE ARLVFD M  R+VVSW++MI +       + A+
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL----DQLKLGTDVSMTNSL 381
            + ++M    V P+ V ++  ++  AD  ++  G  +H  +    +   +G  V  T +L
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG--VPTTTAL 268

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG-------------------------- 415
           + MY+KC  +  A  +F+ L  KT+VSW AMI G                          
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328

Query: 416 -----YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
                YAQ   +++A N F +MR+  ++P   T+VS++   A    +   KW+H+ + + 
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
             E +  + TAL+DMYAKCG +  A  LF     R +  WN +I G+  HG G+ A+++F
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
            +M     KPNDITF+  + ACSH+GLV EG   F  +   +G+ P ++HYG MVDLLGR
Sbjct: 449 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 508

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AG L+EA + I+ MPI+P   V+GA++ AC++HKN +LGE AA +L E++P+  GY+VL+
Sbjct: 509 AGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 568

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           +NIYAAA+ W   A VR  M+  G++K PG S++E+   VH F  G   HPQ +RI   L
Sbjct: 569 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 628

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
             +  ++  AGYVPDT+++  ++++  +E  L+ HSEKLA+AFGL++++P + I I KNL
Sbjct: 629 AEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNL 688

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVC DCH ATK +S + GR IIVRD +RFH F+ G CSCGDYW
Sbjct: 689 RVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 268/569 (47%), Gaps = 89/569 (15%)

Query: 19  QTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKL 78
           Q L  H H  S   + P+ +   P++      ++L++ ++I   IIK+     H  Q   
Sbjct: 24  QQLQHHPH--STLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHF--HHALQI-- 77

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
                    L+D      P      A ++ ++  Y K     +A++   ++R  D     
Sbjct: 78  --------PLNDFPSGLSP-----SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDN 124

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           +    +LK CG V   + GKEIHG ++  G   D+F    ++ MY +C  +E A  +FD+
Sbjct: 125 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 184

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M ERD+VSW+T++   ++N   ++AL+L+  M+    R   + +VS++   A+  ++R+G
Sbjct: 185 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 244

Query: 259 KAVHGYAMRAGFDSIVNV--STALVDMYAKCG---------------------------- 288
           KA+H Y +R   +  + V  +TAL+DMYAKCG                            
Sbjct: 245 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304

Query: 289 ---RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
              R+E AR +FD  ++R+V+ W +M++AY +    ++A  +F +M   GV PT VTI+ 
Sbjct: 305 RSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 364

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L  CA  G L+ G +VH  +D+ ++  D  +  +L+ MY+KC  ++ A  +F +   + 
Sbjct: 365 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 424

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +  WNA+I G+A +G   EAL+ F +M  + +KP+  T + ++ A +   ++   K    
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK---- 480

Query: 466 LVIRSCFEKNV--FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
                 FEK V  F +   I+ Y                          M+D  G  GL 
Sbjct: 481 ----KLFEKMVHTFGLVPQIEHYG------------------------CMVDLLGRAGLL 512

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A E+   M   P KPN I +   ++AC
Sbjct: 513 DEAHEMIKSM---PIKPNTIVWGALVAAC 538


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/754 (35%), Positives = 406/754 (53%), Gaps = 10/754 (1%)

Query: 63   IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDD 121
            I +SG     +    ++S++ K    S A  VF  I  K D + ++TML       S   
Sbjct: 361  IWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGK 420

Query: 122  AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTGVV 180
             V+    M    + P   ++  +L  C +   +  G++IH  ++      ++    T +V
Sbjct: 421  VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLV 480

Query: 181  NMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
            +MY KCG I EA  +F  MP   R LV+WN ++  +AQN  ++ A   +  M + G   D
Sbjct: 481  SMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPD 540

Query: 239  FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             ++  S+L +       ++ +      + +G+ S   + TAL+ M+ +C  +E AR VF+
Sbjct: 541  ALSFTSVLSSCYCSQEAQVLRMC---ILESGYRSAC-LETALISMHGRCRELEQARSVFN 596

Query: 299  GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
             M   +VVSW +M++A  E  + +E   +F++M  +GV P   T+   L  C     L  
Sbjct: 597  EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGL 656

Query: 359  GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
            G  +H  + ++ L  D+++ N+L++MYS C     A   F  ++ + LVSWN M   YAQ
Sbjct: 657  GKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716

Query: 419  NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
             G   EA+  F +M+ + +KPD  T  + +      +++   K  HAL   S  + +V V
Sbjct: 717  AGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSV 776

Query: 479  MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             T L+ +YAKCG +  A +LF    +  V   N +I     HG  + AV++F KM +   
Sbjct: 777  ATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGV 836

Query: 539  KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            +P+  T +  ISAC H+G+VEEG   F ++K+ +GI P ++HY   VDLLGRAG+L  A 
Sbjct: 837  RPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896

Query: 599  DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
              I+KMP E    V+ ++LG CK+  + ELGE+ A R+ ELDP     HV+L+NIY A  
Sbjct: 897  QIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATG 956

Query: 659  MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
             W      R  M  + ++  PG S  E+  +VH F +G   HP++  IY  L+ L   ++
Sbjct: 957  KWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMR 1016

Query: 719  AAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
             AGY  D     DVED ++E  L  HSE++AIAFGL+ + P +T+ I KNLRVCGDCH A
Sbjct: 1017 RAGYEADKG--LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTA 1074

Query: 779  TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TKYIS+V GREIIVRD  RFH F NG CSC D W
Sbjct: 1075 TKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 168/503 (33%), Positives = 269/503 (53%), Gaps = 23/503 (4%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEE 191
           D A  +  YT LL+ C D  ++ +GK  H +LI N G    LF    ++NMY +CG +EE
Sbjct: 20  DRAADLQEYTALLQSCVDSNDLAKGKHAH-ELIANAGLEQHLFLGNCLINMYVRCGSLEE 78

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           A+ +F +M ER++VSW  +++  AQ G FA       T + E     +  T+V++L A A
Sbjct: 79  AHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACA 138

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVST----ALVDMYAKCGRVETARLVFDGMKSRNVV 306
           N   L IG+++H      G +     +T    A+++MYAKCG +E A  VF  +  ++VV
Sbjct: 139 NSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVV 198

Query: 307 SWNSMIAAYV-EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           SW +M  AY  E     +A+RIF++ML Q + P  +T + AL AC  L D   G ++H L
Sbjct: 199 SWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL 255

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT---LVSWNAMILGYAQNGRV 422
           L +  LG D   +N+LI+MY KC   + A  +F  +  +    LVSWNAMI    + GR 
Sbjct: 256 LHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRH 315

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTA 481
            +A+  F ++R + ++P+S T+++++ ALA   V    A+  H  +  S + ++V +  A
Sbjct: 316 GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNA 375

Query: 482 LIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +I MYAKCG    A A+F  +  +  V +WN M+            V  F+ ML     P
Sbjct: 376 IISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435

Query: 541 NDITFLCAISACSHSGLVEEG--IHYFT-SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           N ++F+  ++ACS+S  ++ G  IH    + ++DY    V      +V + G+ G ++EA
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT---MLVSMYGKCGSISEA 492

Query: 598 WDFIQKMPIEP-GITVFGAMLGA 619
               ++MP+    +  +  MLGA
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 275/578 (47%), Gaps = 30/578 (5%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGL----CDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           +L  C + ++L   R I  +I + GL        L    +++++ K  SL DA  VF  I
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAI 192

Query: 99  PDKLDALYHTMLKGYAKFASL-DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           P+K    +  M   YA+      DA+     M    +AP V  +   L  C     +R G
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG 249

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER---DLVSWNTIVAGF 214
             +H  L       D  A   ++NMY KCG  E AY +F  M  R   DLVSWN +++  
Sbjct: 250 TWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISAS 309

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSI 273
            + G    A+ +  R+  EG R + +T+++IL A+A  G      +  HG    +G+   
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRD 369

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           V +  A++ MYAKCG    A  VF  ++ + +V+SWN+M+ A  +  +  + +  F  ML
Sbjct: 370 VVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML 429

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKV 391
             G++P  V+ +  L+AC++   L+ G  +H L L + +   + S+   L+SMY KC  +
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSI 489

Query: 392 DRAADIFSK--LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
             A  +F +  L  ++LV+WN M+  YAQN R  EA     +M    + PD+ +  SV  
Sbjct: 490 SEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV-- 547

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
            L+     + A+ +   ++ S + ++  + TALI M+ +C  +  AR++F+ M+   V +
Sbjct: 548 -LSSCYCSQEAQVLRMCILESGY-RSACLETALISMHGRCRELEQARSVFNEMDHGDVVS 605

Query: 510 WNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT 566
           W  M+     +   K    LF +M LEG   P+  T    +  C  S  +  G  IH   
Sbjct: 606 WTAMVSATAENRDFKEVHNLFRRMQLEGVI-PDKFTLATTLDTCLASTTLGLGKVIHACV 664

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           +   + G+E  +    A++++    G   EA  F + M
Sbjct: 665 T---EIGLEADIAVENALLNMYSNCGDWREALSFFETM 699


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/584 (41%), Positives = 366/584 (62%), Gaps = 6/584 (1%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVSTALV 281
           ALDL+ R        D+     +L     +G +  G+ VH + + + F D+ + +   +V
Sbjct: 74  ALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +MYAKCG ++ AR +FD M ++++V+W ++IA + +   P +A+ +F +ML  G +P + 
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L A      L+ G  +H    +    + V + ++L+ MY++C  +D A   F  +
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K+ VSWNA+I G+A+ G    AL+   KM+ KN +P  FT  SV+ A A +  +   K
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           W+HA +I+S  +   F+   L+DMYAK G++  A+ +FD + +  V +WN M+ G   HG
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           LGK  ++ F +ML    +PN+I+FLC ++ACSHSGL++EG++YF  +KK Y +EP + HY
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHY 429

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
              VDLLGR G L+ A  FI++MPIEP   V+GA+LGAC++HKN+ELG  AA R FELDP
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP 489

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
            + G  +LL+NIYA+A  W  +AKVR +M++ G++K P CS VE++N VH F +    HP
Sbjct: 490 HDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHP 549

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           + K I    E +  +IK  GYVPDT+ +   V+   +E  L  HSEKLA+AF LLN+  G
Sbjct: 550 RIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTG 609

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           S I I+KN+RVCGDCH A K++S V  REIIVRD +RFH F++G
Sbjct: 610 SPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 214/386 (55%), Gaps = 5/386 (1%)

Query: 139 YN-YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKM 195
           YN Y+ LLK C  +G++ +G+ +H  L+ + F LD  L     +VNMYAKCG +++A +M
Sbjct: 87  YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP +D+V+W  ++AGF+QN     AL L  +M   G + +  T+ S+L A  +   L
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL 205

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G  +H + ++ G+ S V V +ALVDMYA+CG ++ A+L FDGM +++ VSWN++I+ +
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
              G  E A+ +  KM  +  +PT+ T    L ACA +G LE+G +VH  + +  L    
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+L+ MY+K   +D A  +F +L    +VSWN M+ G AQ+G   E L+ F +M   
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI 385

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I+P+  + + V+ A +   ++    +   L+ +   E +V      +D+  + G +  A
Sbjct: 386 GIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRA 445

Query: 496 -RALFDMMNERHVTTWNVMIDGYGTH 520
            R + +M  E     W  ++     H
Sbjct: 446 ERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 197/373 (52%), Gaps = 5/373 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LL+ CT L ++   R +   ++ S   D HL  Q  +V+++ K   L DA R+F+ +P K
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  ++ G+++     DA+    +M      P  +  + LLK  G    +  G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              +  G+   ++  + +V+MYA+CG ++ A   FD MP +  VSWN +++G A+ G  E
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L+ +M  +  +    T  S+L A A++G+L  GK VH + +++G   I  +   L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAK G ++ A+ VFD +   +VVSWN+M+    + G  +E +  F++ML  G+EP  +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           + +  L AC+  G L+ G++  +L+ + K+  DV    + + +  +   +DRA     ++
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452

Query: 402 Q-GKTLVSWNAMI 413
               T   W A++
Sbjct: 453 PIEPTAAVWGALL 465


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/686 (36%), Positives = 391/686 (56%), Gaps = 15/686 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C ++G +   + +HG +   G   D+F  T +VN Y +CG   +A ++FD MP
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++V+W  +V G+  N    L L++   M E GR     T+ + L A      + +GK 
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHGYA++ G +SI ++  +L  +YAK G +++A   F  +  +NV++W +MI+A  E   
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260

Query: 321 PEE-AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             E  + +F  ML  GV P   T+   +  C    DL  G  V     ++   T++ + N
Sbjct: 261 CVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----------NGRVNEALNY 428
           S + +Y +  + D A  +F +++  ++++WNAMI GYAQ             R  +AL  
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  ++   +KPD FT  S++   + +  +   + IHA  I+S F  +V V +AL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A   F  M  R   TW  MI GY  HG  + A++LF +M     +PN+ITF+  
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACS++GLVEE  HYF  +KK+Y IEPV+DHYG M+D+  R GR+ +A+ FI++   EP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++ +++  C+ H N+EL   AA++L EL P     ++LL N+Y +   W  +A+VR 
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           +M+++ +      S + +K++V+ F +    HPQ+  +Y  LE L+++ KA GY P  N+
Sbjct: 621 LMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNA 680

Query: 729 -IHDVEDYVQE--NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            + D ED  +     L  HSE+LA+A GLL + PG+T+ + KN+ +C DCH++ K  SL+
Sbjct: 681 ELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLL 740

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDY 811
             REIIVRD  R H FK+G CSCGD+
Sbjct: 741 ENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 257/546 (47%), Gaps = 25/546 (4%)

Query: 17  PTQTL--HEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQ 71
           P +TL   E    L++   + S +Y      LL  C  +  L   R +   + K+G    
Sbjct: 57  PLRTLDVQEAMTMLTEGKAVQSAMY----VPLLHRCVEMGSLGAARAVHGHMAKTGAGAD 112

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
               T LV+ + +  +  DA R+F+ +P++    +  ++ GY   +     +   + M  
Sbjct: 113 MFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLE 172

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
               P  Y     L  C    ++  GK++HG  I  G          + ++YAK G ++ 
Sbjct: 173 MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 232

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           A + F R+PE+++++W T+++  A++    EL L L   M  +G   +  T+ S++    
Sbjct: 233 ALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCG 292

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
               L +GK V  ++ + G ++ + V  + + +Y + G  + A  +F+ M+  ++++WN+
Sbjct: 293 TRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNA 352

Query: 311 MIAAYVEGGNPE-----------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           MI+ Y +  +             +A+ IF+ +    ++P   T    L  C+ +  LE+G
Sbjct: 353 MISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H    +    +DV + ++L++MY+KC  +  A   F ++  +T V+W +MI GY+Q+
Sbjct: 413 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 472

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFV 478
           G+  EA+  F +MR   ++P+  T VS++ A +   ++  A+ +   +    C E  V  
Sbjct: 473 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 532

Query: 479 MTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
              +IDM+ + G V  A +       E +   W+ ++ G  +HG  + A    +K+LE  
Sbjct: 533 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE-- 590

Query: 538 TKPNDI 543
            KP  I
Sbjct: 591 LKPKGI 596



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 24/440 (5%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  EG+       V +L     +GSL   +AVHG+  + G  + + V+T+LV+ Y +CG 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              AR +FDGM  RNVV+W +++  Y     P   + +F +ML+ G  P++ T+   L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C    D++ G  VH    +    +  SM NSL S+Y+K   +D A   F ++  K +++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 410 NAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
             MI   A++    E  L+ F  M    + P+ FT+ SV+        +   K + A   
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG---------- 518
           +   E N+ V  + + +Y + G    A  LF+ M +  + TWN MI GY           
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 519 -THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIE 575
                G  A+ +F  +     KP+  TF   +S CS    +E+G  IH  T +K  +  +
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT-IKSGFLSD 427

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH----KNVELGEK 631
            V++   A+V++  + G + +A     +MP    +T + +M+     H    + ++L E+
Sbjct: 428 VVVN--SALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSMISGYSQHGQPQEAIQLFEE 484

Query: 632 AANRLFELDPDEGGYHVLLA 651
              RL  + P+E  +  LL+
Sbjct: 485 M--RLAGVRPNEITFVSLLS 502



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 31/326 (9%)

Query: 69  CDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF--ASLDD---- 121
           C+ +L  +   + L+ +     +A R+FE + D     ++ M+ GYA+   ++ DD    
Sbjct: 312 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 371

Query: 122 -----AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A++    ++   + P ++ ++ +L VC  +  + +G++IH Q I +GF  D+   
Sbjct: 372 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 431

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +VNMY KCG I++A K F  MP R  V+W ++++G++Q+G  + A+ L   M   G R
Sbjct: 432 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 491

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAG---FDSIVNVSTALVDMYAKCGRVETA 293
            + IT VS+L A +  G   + +A H + M       + +V+    ++DM+ + GRVE A
Sbjct: 492 PNEITFVSLLSACSYAG--LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 549

Query: 294 RLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD---QGVEPTNVTIMEA 346
              F  +K      N   W+S++A     GN E A     K+L+   +G+E T + ++  
Sbjct: 550 ---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE-TYILLLNM 605

Query: 347 LHACADLGDLERGIFVHKLLDQLKLG 372
             +     D+ R   V KL+ Q  +G
Sbjct: 606 YISTERWQDVAR---VRKLMKQEDVG 628


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/754 (33%), Positives = 423/754 (56%), Gaps = 5/754 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++ SGL         L+++F     + DA R+F+ + ++    ++ M+  Y+        
Sbjct: 171 VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC 230

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
              L  MR+ +V P V     L+ VC     +  G  IH   + +G    +  +  +VNM
Sbjct: 231 FIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNM 290

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFI 240
           Y+  G+++EA  +F  M  RD++SWNT+++ + Q+     AL+ + ++   +EG     +
Sbjct: 291 YSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNS-M 349

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  S L A ++  +L  G+ +H   ++    +++ +  +L+ MY+KC  +E    VF+ M
Sbjct: 350 TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM 409

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER-G 359
              +VVS N +   Y    +   AMR+F  M   G++P  +T++     C  LGDL   G
Sbjct: 410 PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYG 469

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           + +H  + Q  L +D  +TNSLI+MY+ C  ++ +  IFS++  K+++SWNA+I    ++
Sbjct: 470 MPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH 529

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR  EA+  F   +    K D F +   + + A L+ +     +H L +++  + +  V+
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            A +DMY KCG +            R    WN +I GY  +G  K A + F  M+    K
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ +TF+  +SACSH+GL+++G+ Y+ S+   +G+ P + H   +VDLLGR G+  EA  
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI +MP+ P   ++ ++L + + HKN+++G KAA  L ELDP +   +VLL+N+YA  + 
Sbjct: 710 FIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNAR 769

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  + K+R+ M+   L K P CS ++LKNEV +F  G   H  +++IY  L+ ++ +++ 
Sbjct: 770 WVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLRE 829

Query: 720 AGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYV DT+S +HD ++  +E+ L +HSEKLA+A+GLL    GSTI I KNLRVC DCH  
Sbjct: 830 VGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLV 889

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K +S+V  REI++RD +RFH FK+G CSC D+W
Sbjct: 890 FKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 266/540 (49%), Gaps = 5/540 (0%)

Query: 59  ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFAS 118
           I  L  ++GL       T L+ L+     + +A R+F  +P +    +  ++   +    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           +++A+    RMR + V         ++ +CG + +   G ++   ++V+G    +     
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           ++ M+    ++++A ++FDRM ERD +SWN +++ ++          +++ M     + D
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T+ S++   A+   + +G  +H   + +G    V +  ALV+MY+  G+++ A  +F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDL 356
            M  R+V+SWN+MI++YV+  +  EA+    ++L  D+G  P ++T   AL AC+    L
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALGACSSPEAL 364

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  +H ++ Q  L   + + NSL++MYSKC  ++    +F  +    +VS N +  GY
Sbjct: 365 MNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR-YAKWIHALVIRSCFEKN 475
           A    V  A+  F  MR   IKP+  TM+++      L  +  Y   +HA V ++    +
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            ++  +LI MYA CG + ++  +F  +N + V +WN +I     HG G+ A++LF     
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              K +       +S+ ++   +EEG+     L    G++       A +D+ G+ G+++
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGKMD 603



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 236/530 (44%), Gaps = 18/530 (3%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR- 156
           +P +  + ++T + G A+      A + L  MR  DV    +    L+  C   G     
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 157 --GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G  IH      G   +++  T ++++Y   G +  A ++F  MP+R++VSW  I+   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           + NG  E AL    RM +EG   +   + +++     +     G  V  + + +G  + V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
           +V+ +L+ M+    RV+ A  +FD M+ R+ +SWN+MI+ Y       +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            V+P   T+   +  CA    +  G  +H L     L   V + N+L++MYS   K+D A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAE 453
             +F  +  + ++SWN MI  Y Q+    EAL    + +++    P+S T  S + A + 
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
              +   + IHA++++   +  + +  +L+ MY+KC ++     +F+ M    V + NV+
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE---GIHYFTS--- 567
             GY        A+ +F+ M     KPN IT +     C   G +      +H + +   
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 568 -LKKDYGIEPVMDHYGAMVDLLGRAG---RLNE----AWDFIQKMPIEPG 609
            L  +Y    ++  Y    DL    G   R+N     +W+ I    +  G
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHG 530


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 284/824 (34%), Positives = 426/824 (51%), Gaps = 88/824 (10%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT-MLKGYAKFASLDD 121
           ++  GL      Q  L+  +    +LSDA R+      + + + H  M+ GYAK  SL D
Sbjct: 46  LVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSD 105

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLK----------VCGDVGEIRRGKEIHGQLIVNGFSL 171
           A     RM   DVA    ++  L+            CG +G      ++ G      F  
Sbjct: 106 AEELFDRMPRRDVA----SWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDR-------------------------------MP 200
           D    T +V+M+ +CG ++ A ++F +                               M 
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ERD+VSWN ++A  +Q+G    AL LV  MH +G R D  T  S L A A + SL  GK 
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R+       V++AL+++YAKCG  + A+ VF+ ++ RN VSW  +I   ++   
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 341

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             +++ +F +M  + +      +   +  C +  DL  G  +H L  +      + ++NS
Sbjct: 342 FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS 401

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN---- 436
           LIS+Y+KC  +  A  +FS +  + +VSW +MI  Y+Q G + +A  +F  M ++N    
Sbjct: 402 LISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITW 461

Query: 437 ----------------------------IKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
                                       + PD  T V++    A++   +    I    +
Sbjct: 462 NAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTV 521

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           ++    NV V  A I MY+KCG +  A+ LFD++N + V +WN MI GY  HG+GK A +
Sbjct: 522 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAK 581

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
            F+ ML    KP+ I+++  +S CSHSGLV+EG  YF  + + +GI P ++H+  MVDLL
Sbjct: 582 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 641

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAG L EA D I KMP++P   V+GA+L ACKIH N EL E AA  +FELD  + G ++
Sbjct: 642 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYM 701

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LLA IY+ A   D  A+VR +M  KG++K PG S +E++N+VH F +    HPQ   I  
Sbjct: 702 LLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRN 761

Query: 709 FLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
            ++ L+++I   GYV   +   ++           HSEKLA+AFG+++      IHI KN
Sbjct: 762 KMDELMEKIAHLGYVRTESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHIMKN 811

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR+CGDCH   K IS VT RE ++RD  RFH FK+G CSCGDYW
Sbjct: 812 LRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 218/474 (45%), Gaps = 50/474 (10%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-MPERD 203
           L+ CG  G +   + +HG+L+  G +  +F    +++ Y  CG + +A ++    + E +
Sbjct: 27  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL-----PA-----VANVG 253
           +++ N ++ G+A+ G    A +L  RM     R D  +  +++     PA        +G
Sbjct: 87  VITHNIMMNGYAKQGSLSDAEELFDRM----PRRDVASWNTLMSDTSRPAGSWMSCGALG 142

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RLV---------------- 296
              +   + G   +  F    +V TALVDM+ +CG V+ A RL                 
Sbjct: 143 CRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLA 202

Query: 297 --------------FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
                         F+ M  R+VVSWN MIAA  + G   EA+ +  +M  +GV   + T
Sbjct: 203 GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 262

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
              +L ACA L  L  G  +H  + +     D  + ++LI +Y+KC     A  +F+ LQ
Sbjct: 263 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 322

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            +  VSW  +I G  Q    ++++  F +MR++ +  D F + ++I        +   + 
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 382

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H+L ++S   + + V  +LI +YAKCG +  A  +F  M+ER + +W  MI  Y   G 
Sbjct: 383 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGN 442

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
              A E F+ M       N IT+   + A    G  E+G+  ++++     + P
Sbjct: 443 IIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 163/350 (46%), Gaps = 38/350 (10%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR-LVFDG 299
            +   L +  + G+L   +A+HG  +  G  S V +   L+  Y  CG +  AR L+   
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME------ALHACADL 353
           +K  NV++ N M+  Y + G+  +A  +F +M  + V   N  + +      +  +C  L
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           G  E    +  L  +     D  +  +L+ M+ +C  VD A+ +FS+++  T+   N+M+
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 414 LGYA-------------------------------QNGRVNEALNYFCKMRSKNIKPDSF 442
            GYA                               Q+GRV EAL    +M  K ++ DS 
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T  S + A A L  + + K +HA VIRS  + + +V +ALI++YAKCG+   A+ +F+ +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            +R+  +W V+I G   +     +VELFN+M       +       IS C
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/656 (37%), Positives = 391/656 (59%), Gaps = 2/656 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +++ Q++VN     L     +   Y + G +  A K F+ +   +L SWNTI+A  ++N 
Sbjct: 33  QLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNK 92

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
                L L  RM +EG+  D   +V  + A   +   +  K  H  A++   +    V+ 
Sbjct: 93  CFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAP 152

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           AL+++Y + G +E A  VF+ +  +N V W  MI  ++          +F +M   G E 
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212

Query: 339 TNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
               +   + AC ++   + G   H L + +  + ++  +  SL+ MY KC  +D A  +
Sbjct: 213 DPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKL 272

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++  + +V W+A+I G+A+NGR  E+++ F +M + ++ P+S T  S++ A + L  +
Sbjct: 273 FEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSL 332

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           +  + +H  +IR+  E +V   T+ IDMYAKCG + TA  +F  + E++V +W+ MI+G+
Sbjct: 333 KQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGF 392

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
           G HGL   A+ LF +M      PN +TF+  +SACSHSG +EEG  +F S+ +DYGI PV
Sbjct: 393 GMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV 452

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
            +HY  MVDLLGRAG+++EA  FI  MP EPG + +GA+LGAC+IH+  EL E+ A +L 
Sbjct: 453 EEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
            L+ D+ G +V+L+NIYA   MW+ + K R  M +KG+ K  G + +E++ +++ F S  
Sbjct: 513 PLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSED 572

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
               ++ +I +   +L + ++  GYVPD   + HDV+D V++ +L  HSEKLAI FGLLN
Sbjct: 573 RFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLN 632

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S  G  I I KN+RVCGDCH A+K+ISL+T R+II+RD+ RFH  ++GVCSCGDYW
Sbjct: 633 SGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 241/511 (47%), Gaps = 14/511 (2%)

Query: 34  IPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
            P    R+P+  LL +    K L    ++   I+ + L    LF   +   + +  SL  
Sbjct: 6   FPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHV 65

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A++ F  I  +    ++T+L  ++K     D +    RM  +      +N  + +K C  
Sbjct: 66  ASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG 125

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +   +  K  H   I      D +    ++N+Y + G +EEA+K+F+ +P ++ V W  +
Sbjct: 126 LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + G           +L +RM   G   D   +  ++ A  NV + + GK  HG  ++  F
Sbjct: 186 IKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNF 245

Query: 271 -DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
            DS   + T+LVDMY KCG ++ A  +F+ +  R+VV W+++IA +   G   E++ +F+
Sbjct: 246 IDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFR 305

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +ML   V P +VT    + AC+ LG L++G  VH  + +  +  DV    S I MY+KC 
Sbjct: 306 QMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCG 365

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +  A  +F ++  K + SW+ MI G+  +G   EALN F +MRS N  P+S T VSV+ 
Sbjct: 366 CIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLS 425

Query: 450 ALAELSVIRYAKWIHALVIRSCF-----EKNVFVMTALIDMYAKCGAVGTARALFDMM-N 503
           A +    I    W H   +   +     E++   M   +D+  + G +  A +  + M  
Sbjct: 426 ACSHSGRIEEG-WSHFKSMSRDYGITPVEEHYACM---VDLLGRAGKIDEALSFINNMPT 481

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           E   + W  ++     H   + A E+  K+L
Sbjct: 482 EPGASAWGALLGACRIHRRAELAEEVAKKLL 512



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 163/319 (51%), Gaps = 9/319 (2%)

Query: 46  LLEVCTSL---KELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDK 101
           L++ C ++   KE +    L IK    D + F QT LV ++ K   L  A ++FE I  +
Sbjct: 220 LIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR 279

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++  ++ G+A+     +++S   +M  D V P    +  ++  C  +G +++G+ +H
Sbjct: 280 DVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVH 339

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G +I NG  LD+   T  ++MYAKCG I  AY++F ++PE+++ SW+T++ GF  +G   
Sbjct: 340 GYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCA 399

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTA 279
            AL+L   M    +  + +T VS+L A ++ G +  G + H  +M    G   +      
Sbjct: 400 EALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWS-HFKSMSRDYGITPVEEHYAC 458

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +VD+  + G+++ A    + M +    S W +++ A       E A  + +K+L    + 
Sbjct: 459 MVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQ 518

Query: 339 TNVTIMEALHACADLGDLE 357
           + V +M + +  AD+G  E
Sbjct: 519 SGVYVMLS-NIYADVGMWE 536


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/700 (35%), Positives = 404/700 (57%), Gaps = 15/700 (2%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P   +  PS  L++ CTSL      L     +I  G        T L++ + K+     A
Sbjct: 45  PPDAHTFPS--LVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSA 102

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ + D+    + TM+  Y +    D A S    MR   + P   +   +L +   V
Sbjct: 103 RKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQP---SSVTMLGLLSGV 159

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E+   + +H  +I  GF  D+     ++N+Y KCG++E+A  +F+ M  RD++SWN++V
Sbjct: 160 LELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLV 219

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +G+AQ G     L L+ RM  +G   D  T  S++ A A    L +GK VHG+ +RAG +
Sbjct: 220 SGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLE 279

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
              ++ T+L+ MY KCG V +A  +F+GM  ++V+SW +MI+  V+    + A+ +F++M
Sbjct: 280 QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRM 339

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
           L   V P+  TI   L ACA+LG    G  VH  + + ++  D+   NSL++MY+KC  +
Sbjct: 340 LKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHL 399

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +++  +F ++  + +VSWNA++ G+AQNG + +AL  F +MR    +PDS T+VS++ A 
Sbjct: 400 EQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQAC 459

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A +  +   KWIH  V +SC    + + TAL+DMY+KCG +G+A+  FD M ++ + +W+
Sbjct: 460 ASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWS 519

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            +I GYG+HG G+ A+ +++  L    +PN + +L  +SACSH+GLV++G+ +F S+ KD
Sbjct: 520 SIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKD 579

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           +GIEP ++H   +VDLL RAGR+ EA+ F ++M  +P + V G +L AC+   NVELG+ 
Sbjct: 580 FGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDI 639

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
            A  +  L P   G +V LA+ YA+   WD + +V T M+   L+K PG S +EL   + 
Sbjct: 640 VAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTIT 699

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHD 731
           +F++  + HPQ + I   L+ L  E++  G       IHD
Sbjct: 700 TFFTDHSSHPQFEEIMLVLKILGSEMRKVG-------IHD 732



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 263/502 (52%), Gaps = 8/502 (1%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           Y+ ++   +   +  D +     M   D  P  + +  L+K C  +     G   H ++I
Sbjct: 16  YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V+G+S D +  T ++N Y+K G  + A K+FD M +R++V W T++  + + G  ++A  
Sbjct: 76  VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M  +G +   +T++ +L  V  +  L   + +H   ++ GF S V ++ +++++Y 
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCGRVE A+ +F+ M +R+V+SWNS+++ Y + GN  E +++  +M   G+EP   T   
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            + A A    L  G  VH  + +  L  D  +  SLI MY KC  V+ A  IF  +  K 
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKD 312

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           ++SW AMI G  QN   + A+  F +M    + P + T+ SV+ A AEL        +H 
Sbjct: 313 VISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHG 372

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            ++R   + ++    +L+ MYAKCG +  + ++FD M+ R + +WN ++ G+  +G    
Sbjct: 373 YILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA 583
           A+ LFN+M +   +P+ IT +  + AC+  G + +G  IH F + K   G   ++D   A
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVT-KSCLGPCILID--TA 489

Query: 584 MVDLLGRAGRLNEAWDFIQKMP 605
           +VD+  + G L  A     +MP
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMP 511



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 14/303 (4%)

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           S+N++I      G   + +  +  ML     P   T    + AC  L     G+  H+ +
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
                 +D  +  SLI+ YSK      A  +F  +  + +V W  MI  Y + G  + A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + +  MR + I+P S TM+ ++  + EL    + + +HA VI+  F  +V +  +++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELV---HLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            KCG V  A+ALF++M+ R V +WN ++ GY   G  +  ++L  +M     +P+  TF 
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 547 CAISACSHS-----GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             +SA +       G +  G      L++D  IE       +++ +  + G +N A+   
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET------SLIGMYLKCGNVNSAFRIF 305

Query: 602 QKM 604
           + M
Sbjct: 306 EGM 308



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 30/253 (11%)

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           S+NA+I   +  G   + L  +  M S +  PD+ T  S++ A   L +  +    H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I   +  + ++ T+LI+ Y+K G   +AR +FD M++R+V  W  MI  Y   G    A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 528 ELFNKMLEGPTKPNDITFLCAISA--------CSHSGLVEEGIHYFTSLKKDY------- 572
            ++N M     +P+ +T L  +S         C H+ +++ G     +L           
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194

Query: 573 -------GIEPVMD-----HYGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAML 617
                   +  +MD      + ++V    + G + E    + +M    IEP    FG+++
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254

Query: 618 GACKIHKNVELGE 630
            A  +   + +G+
Sbjct: 255 SAAAMQSKLGVGK 267


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/695 (37%), Positives = 395/695 (56%), Gaps = 40/695 (5%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNM--YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           K+IH Q++      D +A + +     ++    ++ A K+FD++P+ +L SWN ++   A
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 216 QNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
            +     ++ +  RM H+     +  T   ++ AVA      +GKAVHG A++  F   V
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRN--VVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V  +L+  YA CG ++ A LVF+ ++  N  +VSWNSM+  +V+GG P++A+ +F++M 
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           ++GV P  VT++  + ACA   +L  G  V   +D+ ++  ++++ N+ I M+ KC +V+
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395

Query: 393 RAA-------------------------------DIFSKLQGKTLVSWNAMILGYAQNGR 421
            A                                DIF  +  K + +WN +I GY Q+GR
Sbjct: 396 IARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR 455

Query: 422 VNEALNYF--CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
             EAL  F   ++     +PD  T++S + A A+L  +   +WIH  + +   + N  + 
Sbjct: 456 PKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLA 515

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           T+LIDMY+K G V  A  +F  +  + V  W+ MI G   HG G+AA+ELF  M E   K
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK 575

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN +TF   + ACSHSGLV+EG   F  +++ YG+ P   HY  MVD+LGRAG L EA  
Sbjct: 576 PNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALK 635

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI+ MP+ P  +V+GA+LGAC IH N+EL EKA +RL E++P   G +VLL+N+YA    
Sbjct: 636 FIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGD 695

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W+ ++++R  M   GL+K  GCS +E+   VH F  G   HP S+ IY  L+ ++  +++
Sbjct: 696 WEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRS 755

Query: 720 AGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
            GYV +T  +     E+ ++E  L  HSEK+AIAFGL+ +     I I KNLRVC DCH 
Sbjct: 756 HGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHT 815

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K +S V GR+I++RD +RFH F  G CSC DYW
Sbjct: 816 VAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 234/454 (51%), Gaps = 38/454 (8%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKL--VSLFCKYNSLSDAARVFEPIPDKLD 103
           L + CTS K+L++I   ++++         ++L   + F  +++L  A +VF+ IP    
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             ++ +++  A  +    +V   IRM +D    P  + +  L+K   +      GK +HG
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFA 220
             I   F  D+F +  +++ YA CG ++ AY +F+ +    +D+VSWN++V GF Q G+ 
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + ALDL  RM  EG   + +T+VS++ A A   +L +G+ V  Y  R      +NV  A 
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNAT 384

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVS-------------------------------WN 309
           +DM+ KCG VE AR +FD M+ R+VVS                               WN
Sbjct: 385 IDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444

Query: 310 SMIAAYVEGGNPEEAMRIFQ--KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            +I+ Y + G P+EA+ IF+  ++   G  P  VT++  L ACA LG ++ G ++H  + 
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK 504

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           + ++  + ++  SLI MYSK   V++A ++F  +  K +  W+AMI G A +GR   A+ 
Sbjct: 505 KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIE 564

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            F  M+   +KP+S T  +++ A +   ++   K
Sbjct: 565 LFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGK 598


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/555 (43%), Positives = 351/555 (63%), Gaps = 1/555 (0%)

Query: 259  KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
            + VH  A   G    + V+  LV  Y+    ++ A  +FDGM  R+ VSW+ M+  + + 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 319  GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            G+       F++++  G  P N T+   + AC DL +L+ G  +H ++ +  L  D  + 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 379  NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
             +L+ MY KC++++ A  +F K+  + LV+W  MI GYA+ G  NE+L  F KMR + + 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 439  PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            PD   MV+V+ A A+L  +  A+ I   + R  F+ +V + TA+IDM+AKCG V +AR +
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 499  FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
            FD M E++V +W+ MI  YG HG G+ A++LF  ML     PN IT +  + ACSH+GLV
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 559  EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
            EEG+ +F+ + +DY +   + HY  +VDLLGRAGRL+EA   I  M  E    ++GA LG
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 619  ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
            AC+ HK+V L EKAA  L EL P   G+++LL+NIYA A  W+ +AK+R +M ++ L+K 
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174

Query: 679  PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
            PG + +E+ N+ H F  G T HP+SK IY  L++L ++++  GYVPDTN + HDV++ ++
Sbjct: 1175 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 1234

Query: 738  ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
              +L +HSEKLAIAFGL+ +   + I I KNLRVCGDCH   K +S +TGR IIVRD +R
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294

Query: 798  FHCFKNGVCSCGDYW 812
            FH FK G CSCGDYW
Sbjct: 1295 FHHFKEGACSCGDYW 1309



 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/565 (40%), Positives = 346/565 (61%), Gaps = 5/565 (0%)

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS---ILPAVANVGSLRIGKAVHGYAM 266
           IV    +  F + +L+L  R  EE  +  F+  ++    + A+ N  +L   + VH  A 
Sbjct: 28  IVESXIETQFRQTSLNLHNR-EEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQAS 86

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
             G    + V+  L+  Y+    ++ A  +FDGM  R+ VSW+ M+  + + G+      
Sbjct: 87  VHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFG 146

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
            F++++  G  P N T+   + AC DL +L+ G  +H ++ +  L  D  +  +L+ MY 
Sbjct: 147 TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYV 206

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC++++ A  +F K+Q + LV+W  MI GYA+ G+ NE+L  F KMR + + PD   MV+
Sbjct: 207 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 266

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A A+L  +  A+ I   + R  F+ +V + TA+IDMYAKCG V +AR +FD M E++
Sbjct: 267 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 326

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           V +W+ MI  YG HG G+ A++LF  ML     P+ IT    + ACSH+GLVEEG+ +F+
Sbjct: 327 VISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFS 386

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           S+ +DY +   + HY  +VDLLGRAGRL+EA   I+ M IE    ++GA LGAC+ HK+V
Sbjct: 387 SMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDV 446

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
            L EKAA  L EL     G++VLL+NIYA A  W+ +AK+R +M ++ L+KTPG + +E+
Sbjct: 447 VLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEV 506

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHS 745
            N+ H F  G T HP+SK IY  L++L ++++  GYVPDTN + HDV++ ++  +L +HS
Sbjct: 507 DNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHS 566

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLR 770
           EKLAIAFGL+ +   + I I KNLR
Sbjct: 567 EKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 190/353 (53%), Gaps = 1/353 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C +L ++R++       G+ +  +   KL+  +  Y +L DA  +F+ +  +    +  M
Sbjct: 72  CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVM 131

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G+AK     +       +      P  Y   ++++ C D+  ++ G+ IH  +   G 
Sbjct: 132 VGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 191

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            LD F    +V+MY KC +IE+A  +FD+M ERDLV+W  ++ G+A+ G A  +L L  +
Sbjct: 192 DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 251

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M EEG   D + +V+++ A A +G++   + +  Y  R  F   V + TA++DMYAKCG 
Sbjct: 252 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           VE+AR +FD M+ +NV+SW++MIAAY   G   +A+ +F  ML  G+ P  +T+   L+A
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA 371

Query: 350 CADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           C+  G +E G+ F   + +   + TDV     ++ +  +  ++D A  +   +
Sbjct: 372 CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSM 424



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 189/352 (53%), Gaps = 1/352 (0%)

Query: 51   TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            T+L ++R++       G+    +   KLV  +  Y +L DA  +F+ +  +    +  M+
Sbjct: 749  TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808

Query: 111  KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             G+AK     +       +      P  Y   ++++ C D+  ++ G+ IH  +   G  
Sbjct: 809  GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868

Query: 171  LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            LD F    +V+MY KC +IE+A  +FD+M ERDLV+W  ++ G+A+ G A  +L L  +M
Sbjct: 869  LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928

Query: 231  HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             EEG   D + +V+++ A A +G++   + +  Y  R  F   V + TA++DM+AKCG V
Sbjct: 929  REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988

Query: 291  ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            E+AR +FD M+ +NV+SW++MIAAY   G   +A+ +F  ML  G+ P  +T++  L+AC
Sbjct: 989  ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048

Query: 351  ADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +  G +E G+ F   + +   +  DV     ++ +  +  ++D A  +   +
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 3/397 (0%)

Query: 158  KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            +++H Q  V+G   +L     +V  Y+    +++AY +FD M  RD VSW+ +V GFA+ 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 218  GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            G           +   G R D  T+  ++ A  ++ +L++G+ +H    + G D    V 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 278  TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             ALVDMY KC  +E AR +FD M  R++V+W  MI  Y E GN  E++ +F KM ++GV 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 338  PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
            P  V ++  + ACA LG + +   +   + + K   DV +  ++I M++KC  V+ A +I
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 398  FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
            F +++ K ++SW+AMI  Y  +G+  +AL+ F  M    I P+  T+VS++ A +   ++
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 458  RYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMID 515
                ++   +        +V   T ++D+  + G +  A + +  M  E+    W   + 
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 516  GYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
               TH     A +    +LE  P  P     L  I A
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYA 1151


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/677 (38%), Positives = 397/677 (58%), Gaps = 12/677 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLD----LFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           LLK       +R G+ +H +++    +LD     F    ++NMY+K    E A  +    
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P R++VSW ++V+G AQNG    AL     M  EG   +  T   +  AVA++     GK
Sbjct: 69  PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGK 128

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  A++ G    V V  +  DMY K    + AR +FD +  RN+ +WN+ I+  V  G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDG 188

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
            P+EA+  F +    G +P ++T    L+AC+D   L+ G+ +H L+ +    TDVS+ N
Sbjct: 189 RPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYN 248

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            LI  Y KCK++  +  IF+++  K  VSW +++  Y QN    +A   + + R + ++ 
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVET 308

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             F + SV+ A A ++ +   + IHA  +++C E+N+FV +AL+DMY KCG +  +   F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAF 368

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE---GPTKPNDITFLCAISACSHSG 556
           D M E+++ T N +I GY   G    A+ LF  M     GP  PN +TF+  +SACS +G
Sbjct: 369 DEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPA-PNYMTFVSLLSACSRAG 427

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            VE G+  F S+K  YGIEP  +HY  +VD+LGRAG + +A++FI+KMPI+P I+V+GA+
Sbjct: 428 AVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
             AC++H    LG  AA  LF+LDP + G HVLL+N +AAA  W +   VR  M+  G++
Sbjct: 488 QNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIK 547

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDY 735
           K  G S + +KN+VH+F +    H  +K I T L  L ++++AAGY PD   S++D+E+ 
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEE 607

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +   +S HSEKLA+AFGL+       I I KNLR+CGDCH+  K++S    REIIVRD 
Sbjct: 608 EKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDN 667

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH FK+G+CSC DYW
Sbjct: 668 NRFHRFKDGICSCKDYW 684



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 123/265 (46%), Gaps = 6/265 (2%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L+ +SG          L+  + K   +  +  +F  +  K    + +++  Y +    + 
Sbjct: 234 LVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEK 293

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A    +R R + V    +  + +L  C  +  +  G+ IH   +      ++F  + +V+
Sbjct: 294 ASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVD 353

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDF 239
           MY KCG IE++ + FD MPE++LV+ N+++ G+A  G  ++AL L   M     G   ++
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNY 413

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVF 297
           +T VS+L A +  G++  G  +   +M++  G +      + +VDM  + G VE A    
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFD-SMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFI 472

Query: 298 DGMKSRNVVS-WNSMIAAYVEGGNP 321
             M  +  +S W ++  A    G P
Sbjct: 473 KKMPIKPTISVWGALQNACRMHGKP 497


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/754 (34%), Positives = 428/754 (56%), Gaps = 34/754 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           T+ +  F     + DA ++F+ + +K DA L++ M+KG+       +AV F  RM +  V
Sbjct: 68  TRALRGFADSRLMEDALQLFDEM-NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
               + Y +++K    +  +  GK+IH  +I  GF  D++    ++++Y K G   +A K
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F+ MPERD+VSWN++++G+   G    +L L   M + G + D  + +S L A ++V S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246

Query: 255 LRIGKAVHGYAMRAGFDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            ++GK +H +A+R+  ++  V V T+++DMY+K G V  A  +F+GM  RN+V+WN MI 
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306

Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGD-------LERGIFVHKL 365
            Y   G   +A   FQKM +Q G++P  +T +  L A A L         + RG   H +
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMV 366

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L+            +LI MY +C ++  A  IF ++  K ++SWN++I  Y QNG+   A
Sbjct: 367 LE-----------TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F ++   ++ PDS T+ S++PA AE   +   + IHA +++S +  N  ++ +L+ M
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           YA CG +  AR  F+ +  + V +WN +I  Y  HG G+ +V LF++M+     PN  TF
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
              ++ACS SG+V+EG  YF S+K++YGI+P ++HYG M+DL+GR G  + A  F+++MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
             P   ++G++L A + HK++ + E AA ++F+++ D  G +VLL N+YA A  W+ + +
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           ++ +ME KG+ +T   S VE K + H F +G   H  + +IY  L+ +   +       +
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVG-----EE 710

Query: 726 TNSIHDVEDYVQENLLSS-------HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
              +H V     E L+ S       HS +LA  FGL+++  G  + +R N R+C  CH  
Sbjct: 711 DIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEF 770

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +  S +T REI+V D   FH F NG CSCG+YW
Sbjct: 771 LEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 224/402 (55%), Gaps = 6/402 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+E ++I  ++IK G          L+SL+ K     DA +VFE +P++    +++M+
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY        ++     M      P  ++    L  C  V   + GKEIH   + +   
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263

Query: 171 L-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             D+  MT +++MY+K G++  A ++F+ M +R++V+WN ++  +A+NG    A     +
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323

Query: 230 MHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M E+ G + D IT +++LPA A    +  G+ +HGYAMR GF   + + TAL+DMY +CG
Sbjct: 324 MSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           ++++A ++FD M  +NV+SWNS+IAAYV+ G    A+ +FQ++ D  + P + TI   L 
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           A A+   L  G  +H  + + +  ++  + NSL+ MY+ C  ++ A   F+ +  K +VS
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           WN++I+ YA +G    ++  F +M +  + P+  T  S++ A
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 1/251 (0%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +++ E R I    ++ G     + +T L+ ++ +   L  A  +F+ + +K    +++++
Sbjct: 344 SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             Y +      A+     +    + P       +L    +   +  G+EIH  ++ + + 
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            +   +  +V+MYA CG +E+A K F+ +  +D+VSWN+I+  +A +GF  +++ L + M
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGR 289
                  +  T  S+L A +  G +  G        R  G D  +     ++D+  + G 
Sbjct: 524 IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN 583

Query: 290 VETARLVFDGM 300
              A+   + M
Sbjct: 584 FSAAKRFLEEM 594


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/706 (37%), Positives = 406/706 (57%), Gaps = 40/706 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE---EAYKMFDRMP 200
           LL  C  +  +R    IH Q+I  G     +A++ ++         E    A  +F  + 
Sbjct: 39  LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E +L+ WNT+  G A +     AL L   M   G   +  T   +L + A   + + G+ 
Sbjct: 96  EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD---------------GMKSR-- 303
           +HG+ ++ G D  + V T+L+ MY + GR+E A  VFD               G  SR  
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215

Query: 304 --------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                         +VVSWN+MI+ Y E GN +EA+ +F+ M+   V P   T++  + A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA  G +E G  VH  +D    G+++ + N+LI +YSKC +++ A  +F +L  K ++SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N +I GY       EAL  F +M      P+  TM+S++PA A L  I   +WIH  + +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                     + T+LIDMYAKCG +  A  +F+ +  + +++WN MI G+  HG   A+ 
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +LF++M +   +P+DITF+  +SACSHSG+++ G H F ++ +DY + P ++HYG M+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LG +G   EA + I  M +EP   ++ ++L ACK+H NVELGE  A  L +++P+  G +
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLL+NIYA+A  W+++AK R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I 
Sbjct: 636 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLRVC +CH ATK IS +  REII RD  RFH F++GVCSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 303/597 (50%), Gaps = 75/597 (12%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAAR 93
           I  HPS  LL  C +L+ LR I   +IK GL + +   +KL+  FC     +  L  A  
Sbjct: 31  IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAIS 89

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF+ I +    +++TM +G+A  +    A+   + M    + P  Y + ++LK C     
Sbjct: 90  VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER----------- 202
            + G++IHG ++  G  LDL+  T +++MY + G++E+A+K+FD+ P R           
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209

Query: 203 --------------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
                               D+VSWN +++G+A+ G  + AL+L   M +   R D  T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           V+++ A A  GS+ +G+ VH +    GF S + +  AL+D+Y+KCG +ETA  +F+ +  
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++V+SWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L ACA LG ++ G ++
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 363 HKLLDQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           H  +D+ LK  T+  S+  SLI MY+KC  ++ A  +F+ +  K+L SWNAMI G+A +G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           R + + + F +MR   I+PD  T V ++ A +   ++   + I   + +       + MT
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD------YKMT 503

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
             ++ Y                          MID  G  GL K A E+ N M     +P
Sbjct: 504 PKLEHYG------------------------CMIDLLGHSGLFKEAEEMINMME---MEP 536

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           + + +   + AC   G VE G  +  +L K   IEP     Y  + ++   AGR NE
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIK---IEPENPGSYVLLSNIYASAGRWNE 590


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/685 (36%), Positives = 393/685 (57%), Gaps = 14/685 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL+ C D       + IHG ++  GF  DLF MT +VN+Y+KCG +E A+K+FD +P
Sbjct: 67  YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R++ +W T++ G+ QN    LAL L  +M E G      T+  +L A +++ S+  GK 
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH Y ++   D   ++  +L   Y+K  R+E A   F  +K ++V+SW S+I++  + G 
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 246

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
              ++  F  ML  G++P   T+   L AC  +  L+ G  +H L  +L  G+ + + NS
Sbjct: 247 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 306

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE-----------ALNYF 429
           ++ +Y KC  +  A  +F  ++   LV+WNAMI G+A+   + E           AL  F
Sbjct: 307 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 366

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            K+    +KPD FT  SV+   + L  +   + IH  +I+S    +V V TAL+ MY KC
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 426

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++  A   F  M  R + +W  MI G+  HGL + A++LF  M     KPN +TF+  +
Sbjct: 427 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 486

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           SACSH+GL +E ++YF  ++K Y I+PVMDH+  ++D+  R GR+ EA+D + KM  EP 
Sbjct: 487 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPN 546

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            T++  ++  C+ H   +LG  AA +L +L P +   +V L N++ +A  W  ++KVR +
Sbjct: 547 ETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 606

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+++ + K    S + +K +V+SF      H QS  +Y  LET+++E+KA GY P  +  
Sbjct: 607 MKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVE 666

Query: 730 HDVEDYVQENLLSS---HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
              ++  +E +LSS   HSEKLAIAFGLLN    + I + K++ +C DCHN  ++ISL+ 
Sbjct: 667 VIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLK 726

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDY 811
           GREI++RD  + H F NG CSCG Y
Sbjct: 727 GREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 259/505 (51%), Gaps = 21/505 (4%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           E R I   I+K+G  +     T LV+++ K   +  A +VF+ +P +    + T+L GY 
Sbjct: 82  EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 141

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           + +    A+   I+M      P  Y    +L  C  +  I  GK++H  LI      D  
Sbjct: 142 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 201

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               + + Y+K  ++E A K F  + E+D++SW ++++    NG A  +L     M  +G
Sbjct: 202 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 261

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            + +  T+ S+L A   + +L +G  +H  +++ G+ S + +  +++ +Y KCG +  A+
Sbjct: 262 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 321

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEE-----------AMRIFQKMLDQGVEPTNVTI 343
            +F+GM++ N+V+WN+MIA + +  +  E           A+ +FQK+   G++P   T 
Sbjct: 322 KLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTF 381

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L  C++L  LE+G  +H  + +  +  DV +  +L+SMY+KC  +D+A+  F ++  
Sbjct: 382 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 441

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           +T++SW +MI G+A++G   +AL  F  MR   IKP+  T V V+ A +   +   A + 
Sbjct: 442 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 501

Query: 464 HALVIRSCFEKNVFVMTA-LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
             L+ +    K V    A LIDMY + G V  A  +   MN E + T W+++I G  +HG
Sbjct: 502 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 561

Query: 522 ---LGKAAVELFNKMLEGPTKPNDI 543
              LG  A E   K+     KP D+
Sbjct: 562 KSDLGFYAAEQLLKL-----KPKDV 581



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 11/187 (5%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L VC++L  L +   I   IIKSG+    +  T LVS++ K  S+  A++ F  +P + 
Sbjct: 384 VLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT 443

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ G+A+      A+     MR   + P    +  +L  C   G +      + 
Sbjct: 444 MISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAG-LADEALYYF 502

Query: 163 QLIVNGFS----LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
           +L+   ++    +D FA   +++MY + G++EEA+ +  +M  E +   W+ ++AG   +
Sbjct: 503 ELMQKQYNIKPVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSH 560

Query: 218 GFAELAL 224
           G ++L  
Sbjct: 561 GKSDLGF 567


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/607 (41%), Positives = 371/607 (61%), Gaps = 6/607 (0%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN +++  ++ G    AL  V R      R +  T    L A A +G L   ++V   A 
Sbjct: 76  WNGLLSAHSRAGAPGAALR-VFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
            AG+   V V +AL+ +Y++CG +E A  VFDGM  ++ V+W++M+A +V  G P EA+ 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           ++ +M + GV    V ++  + AC   G+   G  VH  L +  +  DV  T SL+SMY+
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           K   +D A  +F  +  +  V+W+A+I G+AQNGR  EAL+ F ++++  ++P S+ +VS
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
            + A A +  ++  K IH  ++R   E    + TA++DMY+KCG++ +AR LF+ ++ R 
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           +  WN +I   GTHG G  A+ LF ++ E   KP+  TF   +SA SHSGLVEEG  +F 
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
            + K++GIEP   HY  +VDLL R+G + EA D +  M  EP I ++  +L  C  +K +
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           ELGE  A ++ EL P++ G   L++N+YAAA  WDK+ ++R +M+  G +K PG SL+E+
Sbjct: 494 ELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEV 553

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHS 745
           K   H+F      HPQ + I   +  L  E++  GYVP T  + HD++   ++ LLS HS
Sbjct: 554 KGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLD---EDQLLSYHS 610

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           E+LAIAFGLLN+SPG+ + I KNLRVCGDCH+A KYIS +  REI+VRD  RFH FK+G 
Sbjct: 611 ERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGA 670

Query: 806 CSCGDYW 812
           CSCGDYW
Sbjct: 671 CSCGDYW 677



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 231/444 (52%), Gaps = 5/444 (1%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +T  L  C  +G++   + +  +    G+  D+F  + ++++Y++CG +EEA ++
Sbjct: 105 PNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRV 164

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP +D V+W+T+VAGF   G    AL + +RM E G   D + +V ++ A  + G+ 
Sbjct: 165 FDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNA 224

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           RIG +VHG  +R      V  +T+LV MYAK G ++ A  VF  M  RN V+W+++I+ +
Sbjct: 225 RIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGF 284

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G   EA+ +F+++   G++P +  ++ AL ACA +G L+ G  +H  + + +L    
Sbjct: 285 AQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILR-RLEWQC 343

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  +++ MYSKC  ++ A  +F+KL  + LV WNA+I     +G  ++AL  F ++   
Sbjct: 344 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNET 403

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            IKPD  T  S++ AL+   ++   K W   ++     E        ++D+ A+ G V  
Sbjct: 404 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEE 463

Query: 495 AR-ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           A   L  M  E  +  W +++ G   +   +    +  K+LE   +P DI  L  +S   
Sbjct: 464 ANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILE--LRPEDIGVLALVSNLY 521

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPV 577
            +    + +     L KD G + V
Sbjct: 522 AAAKKWDKVREIRKLMKDSGSKKV 545


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/711 (35%), Positives = 390/711 (54%), Gaps = 37/711 (5%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           AP  +   +LL      G + R + +  ++       +LF    +++  A    + +  +
Sbjct: 45  APPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMER 100

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLV-TRMHEEGRRGDFITIVSILPAVANVG 253
           +F  MPERD VS+N ++ GF+  G    ++ L    + EE  R   IT+ +++   + + 
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV------- 306
              +G +VH   +R GF +   V + LVDMYAK G +  AR VF  M+++ VV       
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 307 ------------------------SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
                                   +W +M+    + G   EA+ +F++M  +GV     T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L AC  L   E G  +H  + +     +V + ++L+ MYSKC+ +  A  +F ++ 
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + ++SW AMI+GY QN    EA+  F +M+   IKPD FT+ SVI + A L+ +     
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H L + S   + + V  AL+ +Y KCG++  A  LFD M+     +W  ++ GY   G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K  ++LF KML    KP+ +TF+  +SACS +GLVE+G  YF S++KD+ I P+ DHY 
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DL  R+GR  EA +FI++MP  P    +  +L +C++  N+E+G+ AA  L E DP 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +VLL +++AA   W ++A +R  M  + ++K PGCS ++ KN+VH F +    HP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S RIY  LE L  ++   GY PD +S+ HDV D  + +++S HSEKLAIAFGL+      
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCHNATK+IS +TGR+I+VRD  RFH F +G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 243/530 (45%), Gaps = 60/530 (11%)

Query: 70  DQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLI 127
           D +LF +  L+S       + D  R+F  +P++    Y+ ++ G++   S   +V  +  
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-- 185
            +R + V P     + ++ V   + +   G  +H Q++  GF    F  + +V+MYAK  
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195

Query: 186 -----------------------------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
                                        C  IE+A  +F  M +RD ++W T+V G  Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG    ALD+  RM  EG   D  T  SIL A   + +   GK +H Y  R  ++  V V
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFV 315

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +ALVDMY+KC  +  A  VF  M  RN++SW +MI  Y +    EEA+R F +M   G+
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P + T+   + +CA+L  LE G   H L     L   ++++N+L+++Y KC  ++ A  
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++     VSW A++ GYAQ G+  E ++ F KM    +KPD  T + V+ A +    
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA-- 493

Query: 457 IRYAKWIHALVIRSC-----FEKNVFVM------TALIDMYAKCGAVGTARALFDMM-NE 504
                    LV + C      +K+  ++      T +ID+Y++ G    A      M + 
Sbjct: 494 --------GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545

Query: 505 RHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
                W  ++      G   +GK A E  N +   P  P     LC++ A
Sbjct: 546 PDAFGWATLLSSCRLRGNMEIGKWAAE--NLLETDPQNPASYVLLCSMHA 593



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 156/326 (47%), Gaps = 12/326 (3%)

Query: 46  LLEVCTSL---KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C +L   +E ++I   I ++   D     + LV ++ K  S+  A  VF  +  + 
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ GY + A  ++AV     M+ D + P  +    ++  C ++  +  G + H 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +V+G    +     +V +Y KCG IE+A+++FD M   D VSW  +V G+AQ G A+ 
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD--SIVNVSTAL 280
            +DL  +M   G + D +T + +L A +  G +  G   +  +M+   D   I +  T +
Sbjct: 464 TIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHDIVPIDDHYTCM 522

Query: 281 VDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-P 338
           +D+Y++ GR + A      M  S +   W +++++    GN E      + +L+   + P
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNP 582

Query: 339 TNVTIMEALHAC----ADLGDLERGI 360
            +  ++ ++HA      ++  L RG+
Sbjct: 583 ASYVLLCSMHAAKGQWTEVAHLRRGM 608


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/686 (39%), Positives = 388/686 (56%), Gaps = 51/686 (7%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL-FAMTGVVNMYAKCGQIEEAYKMFD-- 197
           Y +LL+ C  +  +   K IH  L   GF L     +  ++ +Y+K G +  A  +FD  
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 198 --------RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
                   + P   L   NT++  +A  G +  A+DL   M   G   +  T   +L   
Sbjct: 85  HHHHHGHTQAPNSFLC--NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC 142

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A+      G+ VHG  +R GF S + V  ALVDMYAKCG +  A  VFD M  R+VV W 
Sbjct: 143 ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWT 202

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +MI  Y +   P +A+ +F+KM ++G     +T +    A   LGD    I         
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAI--------- 253

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
                                  RA  +F +++ +  +SWN+M+ GY QNGR  +AL+ F
Sbjct: 254 ----------------------SRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 291

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M++    P+  T + ++ A + L      + +H  VI S  + +  +  A++DMY KC
Sbjct: 292 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 351

Query: 490 GAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           G + TA  +F+   + ER V++WNV+I GYG HG GK A+ELF++M     +PNDITF  
Sbjct: 352 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 411

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH+GL++EG   F  + K   + P M HY  MVD+LGRAG LNEA+  I+K+P  
Sbjct: 412 ILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 470

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   V+GA+L AC+IH N ELGE AAN LF+L+P+  GY+VL++NIYAA++ W ++  VR
Sbjct: 471 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 530

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+ +GL+K    S++E   EVH F++     P  + +Y  +E+L  E+K  GYVPD +
Sbjct: 531 QNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 590

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HDVE   +E+LL+ HSEKLA+AFG++    G  I + KNLRVC DCH A K+IS + 
Sbjct: 591 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 650

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GR+IIVRD +RFH F+ G CSCGDYW
Sbjct: 651 GRKIIVRDGNRFHHFQGGRCSCGDYW 676


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/542 (44%), Positives = 339/542 (62%), Gaps = 33/542 (6%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           NV SWNS+IA     G+  EA+R F  M    ++P   T   A+ +C+ L DL  G   H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY------- 416
           +         D+ ++++L+ MYSKC ++  A  +F ++  + +VSW +MI GY       
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159

Query: 417 ------------------------AQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPAL 451
                                   AQNG   E++  F +M +   I  ++ T+ +V+ A 
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A     R  K IH  VI+   E NVFV T++IDMY KCG V  AR  FD M E++V +W+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            M+ GYG HG  K A+E+F +M     KPN ITF+  ++ACSH+GL+EEG H+F ++  +
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 339

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           + +EP ++HYG MVDLLGRAG L EA+D I+ M + P   V+GA+LGAC++HKNV+LGE 
Sbjct: 340 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI 399

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           +A +LFELDP   GY+VLL+NIYA A  W+ + ++R +M+  GL K PG SLV++K  VH
Sbjct: 400 SARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVH 459

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
            F  G  +HPQ ++IY +LE L  +++  GYVPD  S+ HDV    +E +L  HSEKLA+
Sbjct: 460 VFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAV 519

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFG++N+ PG+TIHI KNLRVCGDCH A K+IS +  REI+VRD  RFH F++G+CSCGD
Sbjct: 520 AFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGD 579

Query: 811 YW 812
           YW
Sbjct: 580 YW 581



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 189/365 (51%), Gaps = 35/365 (9%)

Query: 84  KYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           +Y++  +   +F    DK +   +++++   A+     +A+     MR   + P    + 
Sbjct: 21  RYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP 80

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR---- 198
             +K C  + ++  G++ H Q ++ GF  DLF  + +V+MY+KCG++ +A  +FD     
Sbjct: 81  CAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR 140

Query: 199 ---------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
                                      M ERD++SWN+I+A +AQNG +  ++++  RM 
Sbjct: 141 NIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMV 200

Query: 232 EEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           ++G    + +T+ ++L A A+ GS R+GK +H   ++ G +S V V T+++DMY KCG+V
Sbjct: 201 KDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 260

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E AR  FD M+ +NV SW++M+A Y   G+ +EA+ +F +M   GV+P  +T +  L AC
Sbjct: 261 EMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC 320

Query: 351 ADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVS 408
           +  G LE G    K +  +  +   V     ++ +  +   +  A D+   ++ +   V 
Sbjct: 321 SHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 380

Query: 409 WNAMI 413
           W A++
Sbjct: 381 WGALL 385



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-----HSG 556
           +++ +V +WN +I      G    A+  F+ M +   KPN  TF CAI +CS     HSG
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
                 H    +   +G EP +    A+VD+  + G L +A
Sbjct: 96  ---RQAHQQALI---FGFEPDLFVSSALVDMYSKCGELRDA 130



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 12/158 (7%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +IK GL       T ++ ++CK   +  A + F+ + +K    +  M+ GY       +A
Sbjct: 235 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 294

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV--- 179
           +     M    V P    +  +L  C   G +  G            S +     GV   
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH-----WFKAMSHEFDVEPGVEHY 349

Query: 180 ---VNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAG 213
              V++  + G ++EA+ +   M  R D V W  ++  
Sbjct: 350 GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/643 (38%), Positives = 378/643 (58%), Gaps = 37/643 (5%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+F+   +++ Y+K G +E+   +FD+M   D VS+NT++AGF+ NG +  AL+   RM 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           EEG      T VS+L A + +  ++ GK +HG  +       V V  AL +MYAKCG ++
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR +FD M ++NVVSWNSMI+ Y++ G PE   ++F +M   G+ P  VTI        
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI-------- 259

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
                                      ++++S Y +C  +D A   F +++ K  V W  
Sbjct: 260 ---------------------------SNILSAYFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M++G AQNG+  +AL  F +M  +N++PD+FT+ SV+ + A L+ +   + +H   +   
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            + ++ V +AL+DMY+KCG    A  +F  M  R+V +WN MI GY  +G    A+ L+ 
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYE 412

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +ML    KP++ITF+  +SAC H+GLVE G  YF S+ K +G+ P  DHY  M++LLGRA
Sbjct: 413 EMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRA 472

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G +++A D I+ M  EP   ++  +L  C+I+ +V  GE AA  LFELDP   G +++L+
Sbjct: 473 GYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLS 532

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           NIYAA   W  +A VR++M+   ++K    S +E+ N+VH F +    H ++++IY  L 
Sbjct: 533 NIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELN 592

Query: 712 TLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST-IHIRKNL 769
            LI +++ +G+ PDTN + HDV +  + + +  HSEKLA+AF L+    G T I I KN+
Sbjct: 593 RLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNI 652

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH   K++S +  R II+RD++RFH F  G CSC D W
Sbjct: 653 RVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 226/474 (47%), Gaps = 84/474 (17%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTS--LKELRRILPLIIKSGLCDQHLF 74
           PT  L E    L  R    S  Y   + LLL+   S  + + +R+   +      D HL+
Sbjct: 3   PTPRLREAIDALYSRGTANSESY---TRLLLQCVRSNDVVQAKRLQTHM------DLHLY 53

Query: 75  Q-------TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD------ 121
           Q        +L+ L+ K  +LSDA  +F+ +  +    ++ ML  Y+K  +++D      
Sbjct: 54  QPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFD 113

Query: 122 -------------------------AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
                                    A+ F +RM+ +      Y +  +L  C  + +I+R
Sbjct: 114 QMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKR 173

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK+IHG+++       +F    + NMYAKCG +++A  +FDRM  +++VSWN++++G+ Q
Sbjct: 174 GKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQ 233

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG  E    L   M   G   D +TI +IL A                            
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSA---------------------------- 265

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
                  Y +CG ++ A   F  +K ++ V W +M+    + G  E+A+ +F++ML + V
Sbjct: 266 -------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENV 318

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P N TI   + +CA L  L +G  VH       +  D+ ++++L+ MYSKC +   A  
Sbjct: 319 RPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWI 378

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +F ++  + ++SWN+MILGYAQNG+  EAL  + +M  +N+KPD+ T V V+ A
Sbjct: 379 VFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 131/256 (51%), Gaps = 14/256 (5%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           SGL    +  + ++S + +   + +A + F  I +K    + TM+ G A+    +DA+  
Sbjct: 250 SGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLL 309

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M  ++V P  +  + ++  C  +  + +G+ +HG+ ++ G   DL   + +V+MY+K
Sbjct: 310 FREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSK 369

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG+  +A+ +F RM  R+++SWN+++ G+AQNG    AL L   M  E  + D IT V +
Sbjct: 370 CGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGV 429

Query: 246 LPAVANVGSLRIGKA-------VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
           L A  + G +  G+        +HG  M   FD      + ++++  + G ++ A  +  
Sbjct: 430 LSACMHAGLVERGQGYFYSISKIHG--MNPTFDHY----SCMINLLGRAGYMDKAVDLIK 483

Query: 299 GMK-SRNVVSWNSMIA 313
            M    N + W+++++
Sbjct: 484 SMTFEPNCLIWSTLLS 499


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 277/796 (34%), Positives = 418/796 (52%), Gaps = 76/796 (9%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYN 140
           + K  SLSDA  +F  +P +  A ++T++ GY +     +A+   + MR   D  P  + 
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-- 198
           +  ++K CG +G      ++ G L       D    T +V+M  +CG ++ A K F R  
Sbjct: 162 FGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221

Query: 199 -----------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
                                        MPERD+VSWN +++  +++G    ALD+V  
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           MH +G R D  T  S L A A + SL  GK +H   +R        V++A+V++YAKCG 
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
            + A+ VF  ++ RN VSW  +I  +++ G   E++ +F +M  + +      +   +  
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C +  D+  G  +H L  +      V ++NSLISMY+KC  +  A  IF+ +  + +VSW
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIK------------------------------- 438
             MI  Y+Q G + +A  +F  M ++N+                                
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521

Query: 439 -PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            PD  T V++    A++   +    I    ++     +  V+ A+I MY+KCG +  AR 
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
            FD ++ + + +WN MI GY  HG+GK A+E+F+ +L    KP+ I+++  +S CSHSGL
Sbjct: 582 AFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL 641

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG  YF  +K+D+ I P ++H+  MVDLLGRAG L EA + I +MP++P   V+GA+L
Sbjct: 642 VEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALL 701

Query: 618 GACKIHKNVELGEKAANRLFELD-PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
            ACK H N +L E AA  LF+LD P  GGY +LLA +YA A   D  A+VR +M  KG++
Sbjct: 702 SACKTHGNNDLAELAAKHLFDLDSPGSGGY-MLLAKMYADAGKSDDSAQVRKLMRDKGIK 760

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYV 736
           K+PG S +E+ N VH F +    HPQ   I   L+ L+++I   GYV   +   ++    
Sbjct: 761 KSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRTESPRSEIH--- 817

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
                  HSEKLA+AFG+++      IHI KNLR+C DCH   K IS VT RE ++RD  
Sbjct: 818 -------HSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGV 870

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH FK G CSC DYW
Sbjct: 871 RFHHFKGGSCSCMDYW 886



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 163/325 (50%), Gaps = 32/325 (9%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + +V L+ K     +A RVF  + D+    +  ++ G+ ++    ++V    +MR + +A
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMA 389

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              +    L+  C +  +I  G ++H   + +G +  +     +++MYAKCG ++ A  +
Sbjct: 390 VDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELI 449

Query: 196 FDRMPERDLVSWNTIVAGFAQNG----FAELALDLVTR----------------MHEEGR 235
           F+ M ERD+VSW  ++  ++Q G      E   D+ TR                  E+G 
Sbjct: 450 FNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGL 509

Query: 236 R------------GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +             D++T V++    A++G+ ++G  + G+ ++ G     +V  A++ M
Sbjct: 510 KMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITM 569

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y+KCGR+  AR  FD +  +++VSWN+MI  Y + G  ++A+ IF  +L++G +P  ++ 
Sbjct: 570 YSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISY 629

Query: 344 MEALHACADLGDLERGIFVHKLLDQ 368
           +  L  C+  G +E G F   ++ +
Sbjct: 630 VAVLSGCSHSGLVEEGKFYFDMMKR 654



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 32/308 (10%)

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-P 338
           +++ YAK G +  A  +F  M +R+V SWN++++ Y + G    A+ IF  M   G   P
Sbjct: 98  MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
              T    + +C  LG  E  + +  LL +     D  +  +L+ M  +C  +D A+  F
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217

Query: 399 SKLQGKTLVSWNAMILGYAQN-------------------------------GRVNEALN 427
           S+++  T++  N+M++GYA++                               GRV EAL+
Sbjct: 218 SRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALD 277

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
               M  K ++PDS T  S + A A LS + + K +H  VIR+    + +V +A++++YA
Sbjct: 278 MVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYA 337

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG    A+ +F  + +R+  +W V+I G+  +G    +VELFN+M       +      
Sbjct: 338 KCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALAT 397

Query: 548 AISACSHS 555
            IS C ++
Sbjct: 398 LISGCCNT 405



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 43/290 (14%)

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++ A  +C  L D         LL       +V   N +++ Y+K   +  A ++F ++
Sbjct: 65  TLLHAYLSCGALSD------ARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRM 118

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYA 460
             + + SWN ++ GY Q+G+   AL+ F  MR + +  P++FT   V+ +   L     A
Sbjct: 119 PTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVA 178

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGA-----------------------VGTARA 497
             +  L+ +   + +  V TAL+DM  +CGA                       VG A++
Sbjct: 179 LQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKS 238

Query: 498 --------LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
                   +F  M ER V +WN++I      G  + A+++   M     +P+  T+  ++
Sbjct: 239 HGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSL 298

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEA 597
           +AC+    +E G      + ++    P +D Y   AMV+L  + G   EA
Sbjct: 299 TACARLSSLEWGKQLHVQVIRNL---PHIDPYVASAMVELYAKCGCFKEA 345


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/561 (43%), Positives = 357/561 (63%), Gaps = 7/561 (1%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L+ G+A+H +   + F+  + +   +++MYAKCG +E A+ +FD M ++++VSW  +I+ 
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y + G   EA+ +F KML  G +P   T+   L A         G  +H     LK G D
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAF--SLKYGYD 238

Query: 375 --VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
             V + +SL+ MY++   +  A  IF+ L  K +VSWNA+I G+A+ G     +  F +M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             +  +P  FT  SV+ A A    +   KW+HA VI+S  +   ++   LIDMYAK G++
Sbjct: 299 LRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 357

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+ +F  + ++ + +WN +I GY  HGLG  A++LF +ML+   +PN+ITFL  ++AC
Sbjct: 358 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 417

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SHSGL++EG +YF  +KK + IE  + H+  +VDLLGRAGRLNEA  FI++MPI+P   V
Sbjct: 418 SHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 476

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA+LGAC++HKN++LG  AA ++FELDP + G HVLL+NIYA+A      AKVR +M++
Sbjct: 477 WGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 536

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDV 732
            G++K P CS VE++NEVH F +    HP  + I    E +  +IK  GYVPDT+ +   
Sbjct: 537 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 596

Query: 733 EDYVQENL-LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
            +     L L  HSEKLA+AF +L + PG TI I+KN+R+CGDCH+A K+ S V GREII
Sbjct: 597 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 656

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFH F +G+CSC DYW
Sbjct: 657 VRDTNRFHHFLHGMCSCRDYW 677



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 210/362 (58%), Gaps = 1/362 (0%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ +L  C  + ++++G+ IH  +  + F  DL  +  ++NMYAKCG +EEA  +FD+MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +D+VSW  +++G++Q+G A  AL L  +M   G + +  T+ S+L A     S   G+ 
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H ++++ G+D  V+V ++L+DMYA+   +  A+++F+ + ++NVVSWN++IA +   G 
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E  MR+F +ML QG EPT+ T    L ACA  G LE+G +VH  + +        + N+
Sbjct: 288 GEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 346

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY+K   +  A  +F +L  + +VSWN++I GYAQ+G   EAL  F +M    ++P+
Sbjct: 347 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 406

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             T +SV+ A +   ++   ++   L+ +   E  V     ++D+  + G +  A    +
Sbjct: 407 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466

Query: 501 MM 502
            M
Sbjct: 467 EM 468



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 198/372 (53%), Gaps = 5/372 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  CT L++L   R I   I  S   D  +    +++++ K  SL +A  +F+ +P K 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GY++     +A++   +M +    P  +  + LLK  G       G+++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G+ +++   + +++MYA+   + EA  +F+ +  +++VSWN ++AG A+ G  E 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            + L  +M  +G      T  S+L A A+ GSL  GK VH + +++G   I  +   L+D
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G ++ A+ VF  +  +++VSWNS+I+ Y + G   EA+++F++ML   V+P  +T
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+  G L+ G +  +L+ + K+   V+   +++ +  +  +++ A     ++ 
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 469

Query: 403 GK-TLVSWNAMI 413
            K T   W A++
Sbjct: 470 IKPTAAVWGALL 481


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/789 (34%), Positives = 440/789 (55%), Gaps = 15/789 (1%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAAR 93
           P R    P+   L+ C    + R++  +  K GL D   F    LVS++ +   + DA +
Sbjct: 65  PDRFTLPPA---LKSCRG-DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEK 120

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VFE +  +    ++ ++   A      +     +       AP       +L +C  +  
Sbjct: 121 VFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAW 180

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE---RDLVSWNTI 210
              G+ +HG  + +G+         +V+MYAKCG++ +A   F   P    R++VSWN +
Sbjct: 181 PETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVM 240

Query: 211 VAGFAQNGFAELALDLV--TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           + G+A+NG A  A  L+   +M E G   D IT++S+LP  + +  L   + +H + +R 
Sbjct: 241 LGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRR 300

Query: 269 GFDSIVN-VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           G     + V  AL+  Y +CG +  A  VFDG+ S+ V SWN++I A+ + G    A+ +
Sbjct: 301 GLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIEL 360

Query: 328 FQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           F++M +  G +P   +I   L AC +L  L  G   H  + +  L  D  +  SL+S+Y 
Sbjct: 361 FREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYI 420

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK--PDSFTM 444
           +C +   A  +F  ++ K  VSWN MI GY+QNG   E+L  F +M+SK     P     
Sbjct: 421 QCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAA 480

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            S + A +EL  +R  K +H   +++   ++ F+ +++IDMY+KCG+V  AR  FD +  
Sbjct: 481 TSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKA 540

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           +   +W VMI GY  +G GK AV L++KM     +P+  T+L  + AC H+G++E+G+ +
Sbjct: 541 KDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCF 600

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  ++    IE  ++HY  ++ +L RAGR  +A   ++ MP EP   +  ++L AC +H 
Sbjct: 601 FQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHG 660

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
            VELG+K A++L EL+P +  ++VL +N+YA +  WD++ KVR ++   G+ K PGCS +
Sbjct: 661 EVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWI 720

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSS 743
           ++  +V+SF +G    P+  ++     +L ++I+AAGY PDT   +H++E+  +   L  
Sbjct: 721 DIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRW 780

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEK AIAFGLL ++  + + + KN+R+C DCHNA K IS V  REI+VRD  RFH F++
Sbjct: 781 HSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRD 840

Query: 804 GVCSCGDYW 812
           G+CSCGDYW
Sbjct: 841 GLCSCGDYW 849


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/570 (42%), Positives = 345/570 (60%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           + + A A   +L   + VH +   + F     +  +L+ +Y KCG V  AR VFD M+ +
Sbjct: 56  TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++VSW S+IA Y +   PEEA+ +   ML    +P   T    L A     D   G  +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH 175

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C  +D A  +F KL  K  VSWNA+I G+A+ G   
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            AL  F +M     +   FT  SV  ++A L  +   KW+HA +I+S  +   F    L+
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLL 295

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +FD ++++ + TWN M+  +  +GLGK AV  F +M +     N +
Sbjct: 296 DMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQV 355

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFLC ++ACSH GLV+EG  YF  + K+Y +EP +DH+  +V LLGRAG LN A  FI K
Sbjct: 356 TFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MPIEP   V+GA+L AC++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   WD  
Sbjct: 415 MPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR IM+  G++K P CS VE++N VH F +    HP+++ IY     +  +I+  GYV
Sbjct: 475 ARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYV 534

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PD + +   V+D  +E  L  HSEKLA+AF L+    G+TI I KN+R+CGDCH+A KYI
Sbjct: 535 PDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V GREI+VRD +RFH F NG CSC DYW
Sbjct: 595 SKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 197/383 (51%), Gaps = 1/383 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y   +  C     +   +++H  L  + F+ D F    ++++Y KCG + EA
Sbjct: 46  ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            K+FD M  +D+VSW +++AG+AQN   E A+ L+  M +   + +  T  S+L A    
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
               IG+ +H  A++  +   V V +AL+DMYA+CG ++ A  VFD + S+N VSWN++I
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + +   G+ E A+  F +ML  G E T+ T      + A LG LE+G +VH  + + +  
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                 N+L+ MY+K   +  A  +F ++  K LV+WN M+  +AQ G   EA+++F +M
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEM 345

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   I  +  T + ++ A +   +++  K    ++     E  +     ++ +  + G +
Sbjct: 346 RKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLL 405

Query: 493 GTARA-LFDMMNERHVTTWNVMI 514
             A   +F M  E     W  ++
Sbjct: 406 NFALVFIFKMPIEPTAAVWGALL 428



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 185/363 (50%), Gaps = 1/363 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L++ R++   +  S           L+ L+CK  S+ +A +VF+ +  K    + +++ 
Sbjct: 66  NLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIA 125

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GYA+    ++A+  L  M      P  + +  LLK  G   +   G++IH   +   +  
Sbjct: 126 GYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHE 185

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D++  + +++MYA+CG ++ A  +FD++  ++ VSWN +++GFA+ G  E AL     M 
Sbjct: 186 DVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEML 245

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G      T  S+  ++A +G+L  GK VH + +++           L+DMYAK G + 
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMI 305

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR VFD +  +++V+WN+M+ A+ + G  +EA+  F++M   G+    VT +  L AC+
Sbjct: 306 DARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACS 365

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA-ADIFSKLQGKTLVSWN 410
             G ++ G    +++ +  L  ++    +++++  +   ++ A   IF      T   W 
Sbjct: 366 HGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWG 425

Query: 411 AMI 413
           A++
Sbjct: 426 ALL 428



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 10/266 (3%)

Query: 331 MLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +LD G + PT       + ACA   +LE    VH  L   +   D  + NSLI +Y KC 
Sbjct: 41  LLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCG 100

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            V  A  +F +++ K +VSW ++I GYAQN    EA+     M     KP+ FT  S++ 
Sbjct: 101 SVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A    +     + IHAL ++  + ++V+V +AL+DMYA+CG +  A A+FD ++ ++  +
Sbjct: 161 AAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVS 220

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG----IHYF 565
           WN +I G+   G G+ A+  F +ML    +    T+    S+ +  G +E+G     H  
Sbjct: 221 WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI 280

Query: 566 TSLKK--DYGIEPVMDHY---GAMVD 586
            S +K   +    ++D Y   G+M+D
Sbjct: 281 KSRQKMTAFAGNTLLDMYAKSGSMID 306


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/685 (36%), Positives = 393/685 (57%), Gaps = 14/685 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL+ C D       + IHG ++  GF  DLF MT +VN+Y+KCG +E A+K+FD +P
Sbjct: 61  YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R++ +W T++ G+ QN    LAL L  +M E G      T+  +L A +++ S+  GK 
Sbjct: 121 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH Y ++   D   ++  +L   Y+K  R+E A   F  +K ++V+SW S+I++  + G 
Sbjct: 181 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
              ++  F  ML  G++P   T+   L AC  +  L+ G  +H L  +L  G+ + + NS
Sbjct: 241 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 300

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE-----------ALNYF 429
           ++ +Y KC  +  A  +F  ++   LV+WNAMI G+A+   + E           AL  F
Sbjct: 301 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 360

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            K+    +KPD FT  SV+   + L  +   + IH  +I+S    +V V TAL+ MY KC
Sbjct: 361 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 420

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++  A   F  M  R + +W  MI G+  HGL + A++LF  M     KPN +TF+  +
Sbjct: 421 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 480

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           SACSH+GL +E ++YF  ++K Y I+PVMDH+  ++D+  R GR+ EA+D + KM  EP 
Sbjct: 481 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPN 540

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            T++  ++  C+ H   +LG  AA +L +L P +   +V L N++ +A  W  ++KVR +
Sbjct: 541 ETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 600

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+++ + K    S + +K +V+SF      H QS  +Y  LET+++E+KA GY P  +  
Sbjct: 601 MKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVE 660

Query: 730 HDVEDYVQENLLSS---HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
              ++  +E +LSS   HSEKLAIAFGLLN    + I + K++ +C DCHN  ++ISL+ 
Sbjct: 661 VIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLK 720

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDY 811
           GREI++RD  + H F NG CSCG Y
Sbjct: 721 GREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 259/505 (51%), Gaps = 21/505 (4%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           E R I   I+K+G  +     T LV+++ K   +  A +VF+ +P +    + T+L GY 
Sbjct: 76  EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 135

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           + +    A+   I+M      P  Y    +L  C  +  I  GK++H  LI      D  
Sbjct: 136 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 195

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
               + + Y+K  ++E A K F  + E+D++SW ++++    NG A  +L     M  +G
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 255

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            + +  T+ S+L A   + +L +G  +H  +++ G+ S + +  +++ +Y KCG +  A+
Sbjct: 256 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 315

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEE-----------AMRIFQKMLDQGVEPTNVTI 343
            +F+GM++ N+V+WN+MIA + +  +  E           A+ +FQK+   G++P   T 
Sbjct: 316 KLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTF 375

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L  C++L  LE+G  +H  + +  +  DV +  +L+SMY+KC  +D+A+  F ++  
Sbjct: 376 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 435

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           +T++SW +MI G+A++G   +AL  F  MR   IKP+  T V V+ A +   +   A + 
Sbjct: 436 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 495

Query: 464 HALVIRSCFEKNVFVMTA-LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
             L+ +    K V    A LIDMY + G V  A  +   MN E + T W+++I G  +HG
Sbjct: 496 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 555

Query: 522 ---LGKAAVELFNKMLEGPTKPNDI 543
              LG  A E   K+     KP D+
Sbjct: 556 KSDLGFYAAEQLLKL-----KPKDV 575



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 11/187 (5%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L VC++L  L +   I   IIKSG+    +  T LVS++ K  S+  A++ F  +P + 
Sbjct: 378 VLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT 437

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ G+A+      A+     MR   + P    +  +L  C   G +      + 
Sbjct: 438 MISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAG-LADEALYYF 496

Query: 163 QLIVNGFS----LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQN 217
           +L+   ++    +D FA   +++MY + G++EEA+ +  +M  E +   W+ ++AG   +
Sbjct: 497 ELMQKQYNIKPVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSH 554

Query: 218 GFAELAL 224
           G ++L  
Sbjct: 555 GKSDLGF 561


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/652 (38%), Positives = 388/652 (59%), Gaps = 16/652 (2%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           +C ++  L  +   ++  GL       TKLVSL+  +  L  A  VF+ IP      +  
Sbjct: 14  LCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKV 73

Query: 109 MLKGYAKFASLDDAVSFLIRMRY-----DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
           +++ Y   +   D V F  RMR      D+V      ++++LK C +      G+++H Q
Sbjct: 74  IIRWYFLNSEFRDIVGFYNRMRVCLKECDNVV-----FSHVLKACSESRNFDEGRKVHCQ 128

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++  G + D F  TG+V+MYAKCG+IE +  +FD   +R++ SW++++AG+ QN  A+  
Sbjct: 129 IVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDG 187

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L L  RM EE    + IT+  ++ A   +G+L  GK +HGY ++ G +    + TAL+D+
Sbjct: 188 LVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDL 247

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YAKCG V  AR VFD +   ++VSW +MI  Y + G PEEA+++F +     V P +VTI
Sbjct: 248 YAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTI 307

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
                +C+ L +L  G  +H L   +KLG+ D  +TNSL+  Y+KC+    A  +F  + 
Sbjct: 308 ASVFSSCSQLLNLNLGRSIHGL--SIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETIS 365

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +V+WN++I  ++QNG   EAL  F +MR  ++ PD+ T+VSV+ A A L+ ++    
Sbjct: 366 DRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS 425

Query: 463 IHALVI-RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            HA  + R     NV+V TAL+  YAKCG   +AR +FD M+++   TW+ MI GYG  G
Sbjct: 426 FHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQG 485

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G+ ++ +F  ML+   KPN+  F   +SACSH+G++ EG   FT + +DY + P   HY
Sbjct: 486 NGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHY 545

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLL RAGRL EA DFIQKMP++P +++FGA L  C +H   +LGE A  R+ EL P
Sbjct: 546 TCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHP 605

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            +  Y+VL+ N+YA+ + W K+ +VR +M+++GL KTPGCSL+E+  + H F
Sbjct: 606 GDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMDVD-HDF 656


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/686 (35%), Positives = 391/686 (56%), Gaps = 15/686 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL VC + G +   + +HG ++  G S D+F  T +VN Y +CG  ++A  +FD+MP
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E+++V+W  ++ G+  N     AL++   M E GR     T+ ++L A +   +  +G  
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHGY ++    SI ++  +L  MYAK G +E+A   F  +  +NV++W +MI+A  E  N
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260

Query: 321 PEE-AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             E  + +F  ML  GV P   T+   +  C    DL  G  V     ++   T++ + N
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKN 320

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----------NGRVNEALNY 428
           S + +Y +  + D A   F ++   ++++WNAMI GYAQ             R  +AL  
Sbjct: 321 STMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  ++   +KPD FT  S++   + +  +   + IHA  I++ F  +V V +AL++MY K
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A   F  M+ R + TW  MI GY  HG  + A++LF  M     +PN+ITF+C 
Sbjct: 441 CGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCV 500

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACS++GL E+  HYF  +K++Y IEP++DHYG MVD+  R GRL++A+ FI++   EP
Sbjct: 501 LSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++ +++  C+ H N+EL   AA+RL EL P     +VLL N+Y +   W  +A+VR 
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRK 620

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP-DTN 727
           +M+++GL      S + +K++V+ F +    H  S  +Y  LE L+++ K  GY P  + 
Sbjct: 621 LMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSA 680

Query: 728 SIHDVEDYVQE--NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            + D ED  +     +  HSE+LA+A GLL + PG+T+ + KN+ +C DCH++ K+ SL+
Sbjct: 681 ELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLL 740

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDY 811
             REI+VRD  R H FK+G CSCGD+
Sbjct: 741 ANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 250/536 (46%), Gaps = 36/536 (6%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTK 77
           L E K T+    Y+P          LL VC    SL   R +   ++K+G        T 
Sbjct: 70  LREGK-TVQSAMYVP----------LLHVCVETGSLGGARALHGHMVKTGTSADMFVATS 118

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+ + +  +  DA  +F+ +P+K    +  ++ GY   + L +A+   + M      P 
Sbjct: 119 LVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPS 178

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN----MYAKCGQIEEAY 193
            Y    +L  C        G ++HG  I         ++T + N    MYAK G +E A 
Sbjct: 179 HYTLGAMLNACSASNNADLGSQVHGYTI----KYRALSITSIGNSLCRMYAKSGSLESAM 234

Query: 194 KMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           + F  +P++++++W T+++  A++  + EL L L   M  +G   +  T+ S++      
Sbjct: 235 RAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTR 294

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
             L +GK V  +  + G  + + V  + + +Y + G  + A   F+ M   ++++WN+MI
Sbjct: 295 LDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMI 354

Query: 313 AAY---VEGGNPE--------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           + Y   +E    +        +A+++F+ +    ++P   T    L  C+ +  LE+G  
Sbjct: 355 SGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQ 414

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H    +    +DV + ++L++MY+KC  ++ A   F ++  +TLV+W +MI GY+Q+GR
Sbjct: 415 IHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGR 474

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMT 480
             EA+  F  MR   ++P+  T V V+ A +   +   A+ +   +      E  V    
Sbjct: 475 PQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYG 534

Query: 481 ALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            ++DM+ + G +  A A       E +   W+ ++ G  +HG  + A    ++++E
Sbjct: 535 CMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIE 590



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 198/429 (46%), Gaps = 23/429 (5%)

Query: 203 DLVSWNTIVAGFAQNG------FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D  +WN      AQNG         L +     M  EG+       V +L      GSL 
Sbjct: 36  DKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLG 95

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
             +A+HG+ ++ G  + + V+T+LV+ Y +CG  + AR +FD M  +NVV+W ++I  Y 
Sbjct: 96  GARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYT 155

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
                 EA+ +F +ML+ G  P++ T+   L+AC+   + + G  VH    + +  +  S
Sbjct: 156 VNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITS 215

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE-ALNYFCKMRSK 435
           + NSL  MY+K   ++ A   F  +  K +++W  MI   A++    E  L  F  M   
Sbjct: 216 IGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMD 275

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            + P+ FT+ SV+        +   K + A   +   + N+ V  + + +Y + G    A
Sbjct: 276 GVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEA 335

Query: 496 RALFDMMNERHVTTWNVMIDGYG-----------THGLGKAAVELFNKMLEGPTKPNDIT 544
              F+ M++  + TWN MI GY                G  A+++F  +     KP+  T
Sbjct: 336 MRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFT 395

Query: 545 FLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           F   +S CS    +E+G  IH  T +K  +  + V++   A+V++  + G + +A     
Sbjct: 396 FSSILSVCSSMMALEQGEQIHAQT-IKTGFLSDVVVN--SALVNMYNKCGCIEDATKAFV 452

Query: 603 KMPIEPGIT 611
           +M I   +T
Sbjct: 453 EMSIRTLVT 461



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 184/379 (48%), Gaps = 22/379 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD-AVSFLIRMRYDDVAP 136
           L  ++ K  SL  A R F  +PDK    + TM+   A+  +  +  ++  + M  D V P
Sbjct: 220 LCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLP 279

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             +  T ++ +CG   ++  GK++       G   ++      + +Y + G+ +EA + F
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFF 339

Query: 197 DRMPERDLVSWNTIVAGFAQ-------------NGFAELALDLVTRMHEEGRRGDFITIV 243
           + M +  +++WN +++G+AQ              GF   AL +   +     + D  T  
Sbjct: 340 EEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQ--ALKVFRNLKRSAMKPDLFTFS 397

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           SIL   +++ +L  G+ +H   ++ GF S V V++ALV+MY KCG +E A   F  M  R
Sbjct: 398 SILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIR 457

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
            +V+W SMI+ Y + G P+EA+++F+ M   GV P  +T +  L AC+  G  E+     
Sbjct: 458 TLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYF 517

Query: 364 KLL-DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNG 420
            ++ ++ K+   V     ++ M+ +  ++D A   F +  G       W++++ G   +G
Sbjct: 518 DMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAF-AFIRRTGFEPNEAIWSSLVAGCRSHG 576

Query: 421 RVNEALNYFCKMRSKNIKP 439
             N  L ++   R   ++P
Sbjct: 577 --NMELAFYAADRLIELRP 593



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF--ASLDD---------AVSFLIRM 129
           L+ +     +A R FE + D     ++ M+ GYA+    + DD         A+     +
Sbjct: 325 LYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNL 384

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           +   + P ++ ++ +L VC  +  + +G++IH Q I  GF  D+   + +VNMY KCG I
Sbjct: 385 KRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCI 444

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           E+A K F  M  R LV+W ++++G++Q+G  + A+ L   M   G R + IT V +L A 
Sbjct: 445 EDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSAC 504

Query: 250 ANVGSLRIGKAVHGYAM---RAGFDSIVNVSTALVDMYAKCGRVETA-----RLVFDGMK 301
           +  G     KA H + M       + IV+    +VDM+ + GR++ A     R  F+   
Sbjct: 505 SYAGLAE--KAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP-- 560

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD---QGVEPTNVTIMEALHACADLGDLER 358
             N   W+S++A     GN E A     ++++   +G+E T V ++    +     D+ R
Sbjct: 561 --NEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIE-TYVLLLNMYISNERWHDVAR 617

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
              V KL+ Q  LG  V M  S I++  K
Sbjct: 618 ---VRKLMKQEGLG--VLMDRSWITIKDK 641


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/751 (34%), Positives = 429/751 (57%), Gaps = 8/751 (1%)

Query: 62   LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            L++K+GL +       LVS +  +  ++DA ++F+ +P++    +++M++ ++     ++
Sbjct: 567  LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 626

Query: 122  AVSFLIRMRYDD----VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
            +   L  M  ++      P V     +L VC    EI  GK +HG  +      +L    
Sbjct: 627  SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN 686

Query: 178  GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-- 235
             +++MY+KCG I  A  +F     +++VSWNT+V GF+  G      D++ +M   G   
Sbjct: 687  ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 746

Query: 236  RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            + D +TI++ +P   +   L   K +H Y+++  F     V+ A V  YAKCG +  A+ 
Sbjct: 747  KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 806

Query: 296  VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
            VF G++S+ V SWN++I  + +  +P  ++    +M   G+ P + T+   L AC+ L  
Sbjct: 807  VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 866

Query: 356  LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            L  G  VH  + +  L  D+ +  S++S+Y  C ++     +F  ++ K+LVSWN +I G
Sbjct: 867  LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 926

Query: 416  YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            Y QNG  + AL  F +M    I+    +M+ V  A + L  +R  +  HA  ++   E +
Sbjct: 927  YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 986

Query: 476  VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             F+  +LIDMYAK G++  +  +F+ + E+   +WN MI GYG HGL K A++LF +M  
Sbjct: 987  AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 1046

Query: 536  GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
                P+D+TFL  ++AC+HSGL+ EG+ Y   +K  +G++P + HY  ++D+LGRAG+L+
Sbjct: 1047 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 1106

Query: 596  EAWDFI-QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
            +A   + ++M  E  + ++ ++L +C+IH+N+E+GEK A +LFEL+P++   +VLL+N+Y
Sbjct: 1107 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 1166

Query: 655  AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
            A    W+ + KVR  M +  L+K  GCS +EL  +V SF  G       + I +    L 
Sbjct: 1167 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE 1226

Query: 715  DEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
             +I   GY PDT S+ HD+ +  +   L  HSEKLA+ +GL+ +S G+TI + KNLR+C 
Sbjct: 1227 MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICV 1286

Query: 774  DCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
            DCHNA K IS V  REI+VRD  RFH FKNG
Sbjct: 1287 DCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 287/527 (54%), Gaps = 11/527 (2%)

Query: 38  IYRHPSALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAAR 93
           + R    LLL+     K++   R+I  L+  S  L +  +  T++++++    S  D+  
Sbjct: 437 LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 496

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVG 152
           VF+ +  K    ++ ++  Y++    D+ +   I M    D+ P  + Y  ++K C  + 
Sbjct: 497 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           ++  G  +HG ++  G   D+F    +V+ Y   G + +A ++FD MPER+LVSWN+++ 
Sbjct: 557 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRA 268
            F+ NGF+E +  L+  M EE   G F+    T+V++LP  A    + +GK VHG+A++ 
Sbjct: 617 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
             D  + ++ AL+DMY+KCG +  A+++F    ++NVVSWN+M+  +   G+      + 
Sbjct: 677 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 736

Query: 329 QKMLDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           ++ML  G  V+   VTI+ A+  C     L     +H    + +   +  + N+ ++ Y+
Sbjct: 737 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 796

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  +  A  +F  ++ KT+ SWNA+I G+AQ+     +L+   +M+   + PDSFT+ S
Sbjct: 797 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 856

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           ++ A ++L  +R  K +H  +IR+  E+++FV  +++ +Y  CG + T +ALFD M ++ 
Sbjct: 857 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 916

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           + +WN +I GY  +G    A+ +F +M+    +   I+ +    ACS
Sbjct: 917 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 963



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 3/164 (1%)

Query: 52   SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
            SL+  R      +K  L D       L+ ++ K  S++ +++VF  + +K  A ++ M+ 
Sbjct: 967  SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 1026

Query: 112  GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFS 170
            GY       +A+     M+     P    +  +L  C   G I  G     Q+  + G  
Sbjct: 1027 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 1086

Query: 171  LDLFAMTGVVNMYAKCGQIEEAYKMF--DRMPERDLVSWNTIVA 212
             +L     V++M  + GQ+++A ++   +   E D+  W ++++
Sbjct: 1087 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 1130


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/673 (38%), Positives = 390/673 (57%), Gaps = 9/673 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-- 200
           LL  C  +  + R   +H  LIV+   S      + +   YA+ G +  A       P  
Sbjct: 9   LLSSCAALRTLTR---LHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
              + +WN ++A  ++      AL  V R      R D  T    L A A +G L  G+ 
Sbjct: 66  PSSIPAWNALLAAHSRGASPHEALR-VFRALPPAARPDSTTFTLALSACARLGDLATGEV 124

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           V   A  AG+ + + V ++++++YAKCG ++ A  VFD M+ R+ V+W++M+  +V  G 
Sbjct: 125 VTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQ 184

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           P +A+ ++ +M   G+E   V I+  + ACA  GD   G  VH  L +  +  DV ++ S
Sbjct: 185 PVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTS 244

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K    D+A  +F  +  +  VSW+A+I   AQ G  +EAL  F  M+   + P+
Sbjct: 245 LVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPN 304

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S  +V  + A ++L +++  K IH  ++R+  E +  V TA+IDMY+KCG++ +A+ LFD
Sbjct: 305 SGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFD 363

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            +  R + +WNVMI   G HG G+ A+ LF +M     +P+  TF   +SA SHSGLVEE
Sbjct: 364 KVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEE 423

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  +F  +  +YGIEP   H   +VDLL R+G + EA   +  +  +P I++  A+L  C
Sbjct: 424 GKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGC 483

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
             +  +ELGE  A ++ EL P + G   L++N+YAAA  W K+ +VR +M+  G +K PG
Sbjct: 484 LNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPG 543

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
           CS +E++  +H+F      HPQ ++I   +  L  E++  GY+P T  + HD+E+ V+E 
Sbjct: 544 CSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQ 603

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
           LLS HSE+LA AFGLLN+SPG+ + + KNLRVCGDCH+A KY+S +  REI+VRD  RFH
Sbjct: 604 LLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFH 663

Query: 800 CFKNGVCSCGDYW 812
            FK+G CSCGDYW
Sbjct: 664 HFKDGACSCGDYW 676



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/548 (30%), Positives = 284/548 (51%), Gaps = 22/548 (4%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL-IIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           P R+ R     LL  C +L+ L R+  L I+ S     H+  + L + + +   L+ A  
Sbjct: 3   PRRLRR-----LLSSCAALRTLTRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAES 57

Query: 94  VFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
                P    ++  ++ +L  +++ AS  +A+  + R       P    +T  L  C  +
Sbjct: 58  TLATAPTSPSSIPAWNALLAAHSRGASPHEALR-VFRALPPAARPDSTTFTLALSACARL 116

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           G++  G+ +  +    G+  D+F  + V+N+YAKCG +++A K+FDRM +RD V+W+T+V
Sbjct: 117 GDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMV 176

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            GF   G    A+++  RM  +G   D + IV ++ A A  G  R+G +VHGY +R    
Sbjct: 177 TGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQ 236

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             V +ST+LVDMYAK G  + AR VF+ M  RN VSW+++I+   + GN +EA+ +F+ M
Sbjct: 237 MDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMM 296

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKK 390
              G+ P +  ++ AL AC+DLG L+ G  +H  +L  L+L  D  +  ++I MYSKC  
Sbjct: 297 QVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLEL--DRMVGTAVIDMYSKCGS 354

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A  +F K+  + L+SWN MI     +GR  +AL+ F +M+   ++PD  T  S++ A
Sbjct: 355 LSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSA 414

Query: 451 LAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVT 508
           L+   ++   K W + +V     E     +  ++D+ A+ G V  A  L   ++ +  ++
Sbjct: 415 LSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTIS 474

Query: 509 TWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
               ++ G   +    LG++  E   K+LE   +P D+  L  +S    +      +   
Sbjct: 475 ILVALLSGCLNNNKLELGESTAE---KILE--LQPGDVGVLALVSNLYAAAKNWYKVREV 529

Query: 566 TSLKKDYG 573
             L KD+G
Sbjct: 530 RKLMKDHG 537


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/710 (36%), Positives = 394/710 (55%), Gaps = 12/710 (1%)

Query: 113 YAKFASLDDAVSFLIRM--RYDDVAPVVYNYT------YLLKVCGDVGEIRRGKEIHGQL 164
           +     +   V+F +++   Y    P  + ++      +LL     +  ++   +IH QL
Sbjct: 64  FEGLGPMSREVAFWLQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQL 123

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAEL 222
           +       L  +  ++ +YAKCG I     +F+  P    ++V+W T++   +++     
Sbjct: 124 VTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQ 183

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL    RM   G   +  T  +ILPA A+   L  G+ +H    +  F +   V+TAL+D
Sbjct: 184 ALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLD 243

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG +  A  VFD M  RN+VSWNSMI  +V+      A+ +F+++L  G  P  V+
Sbjct: 244 MYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVS 301

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           I   L ACA L +L+ G  VH  + +  L   V + NSL+ MY KC   + A  +F    
Sbjct: 302 ISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGG 361

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +V+WN MI+G  +     +A  YF  M  + ++PD  +  S+  A A ++ +     
Sbjct: 362 DRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTM 421

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH+ V+++   KN  + ++L+ MY KCG++  A  +F    E +V  W  MI  +  HG 
Sbjct: 422 IHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGC 481

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
              A++LF +ML     P  ITF+  +SACSH+G +++G  YF S+   + I+P ++HY 
Sbjct: 482 ANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYA 541

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGR GRL EA  FI+ MP EP   V+GA+LGAC  H NVE+G + A RLF+L+PD
Sbjct: 542 CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPD 601

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G ++LL+NIY    M ++  +VR +M   G++K  GCS +++KN    F +    H +
Sbjct: 602 NPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSR 661

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
           ++ IY  L+ L + IK  GYV +T    +  +  +E  L  HSEKLA+AFGLL   PGS 
Sbjct: 662 TQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSLWCHSEKLALAFGLLVLPPGSP 721

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I+KNLR CGDCH   K+ S +  REIIVRD++RFH F NG CSC DYW
Sbjct: 722 VRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 256/545 (46%), Gaps = 28/545 (5%)

Query: 78  LVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           L+ L+ K  S+     +F   P P      + T++   ++      A++F  RMR   + 
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + ++ +L  C     +  G++IH  +  + F  D F  T +++MYAKCG +  A  +
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENV 257

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP R+LVSWN+++ GF +N     A+ +   +   G   D ++I S+L A A +  L
Sbjct: 258 FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVEL 315

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GK VHG  ++ G   +V V  +LVDMY KCG  E A  +F G   R+VV+WN MI   
Sbjct: 316 DFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGC 375

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
               N E+A   FQ M+ +GVEP   +     HA A +  L +G  +H  + +     + 
Sbjct: 376 FRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNS 435

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +++SL++MY KC  +  A  +F + +   +V W AMI  + Q+G  NEA+  F +M ++
Sbjct: 436 RISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNE 495

Query: 436 NIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            + P+  T VSV+ A +    I    K+ +++      +  +     ++D+  + G +  
Sbjct: 496 GVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEE 555

Query: 495 A-RALFDMMNERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           A R +  M  E     W  ++   G H    +G+   E   K+   P  P +   L  I 
Sbjct: 556 ACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKL--EPDNPGNYMLLSNIY 613

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG-AMVDLLGRA----------GRLNEAWD 599
                G++EE       +++  GI  V    G + +D+  R            R  E + 
Sbjct: 614 I--RHGMLEEA----DEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYG 667

Query: 600 FIQKM 604
            +QK+
Sbjct: 668 MLQKL 672



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E ++I  LI K    +     T L+ ++ K  S+  A  VF+ +P +    +++M+ G
Sbjct: 216 LSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVG 275

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           + K      A+     +    + P   + + +L  C  + E+  GK++HG ++  G    
Sbjct: 276 FVKNKLYGRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGL 333

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           ++    +V+MY KCG  E+A K+F    +RD+V+WN ++ G  +    E A      M  
Sbjct: 334 VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIR 393

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG   D  +  S+  A A++ +L  G  +H + ++ G      +S++LV MY KCG +  
Sbjct: 394 EGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLD 453

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  VF   K  NVV W +MI  + + G   EA+++F++ML++GV P  +T +  L AC+ 
Sbjct: 454 AYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSH 513

Query: 353 LGDLERGI 360
            G ++ G 
Sbjct: 514 TGKIDDGF 521


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/570 (41%), Positives = 368/570 (64%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L +  +  +L  GK +H    + G    ++++T LV+ Y+ C  +  A  +FD +   
Sbjct: 63  SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG 122

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N+  WN +I AY   G  E A+ ++ +ML+ G++P N T+   L AC+ L  +  G  +H
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           + + +     DV +  +L+ MY+KC  V  A  +F K+  +  V WN+M+  YAQNG  +
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           E+L+  C+M +K ++P   T+V+VI + A+++ + + + IH    R  F+ N  V TALI
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALI 302

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAKCG+V  A  LF+ + E+ V +WN +I GY  HGL   A++LF +M++   +P+ I
Sbjct: 303 DMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHI 361

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+ A++ACS   L++EG   +  + +D  I P ++HY  MVDLLG  G+L+EA+D I++
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQ 421

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M + P   V+GA+L +CK H NVEL E A  +L EL+PD+ G +V+LAN+YA +  W+ +
Sbjct: 422 MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGV 481

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A++R +M  KG++K   CS +E+KN+V++F SG   HP S  IY  L+ L   ++ AGYV
Sbjct: 482 ARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYV 541

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PDT S+ HDVE+  + +++ SHSE+LAIAFGL+++ PG+ + I KNLR+C DCH A K+I
Sbjct: 542 PDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFI 601

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +T REI VRD++R+H F++G+CSCGDYW
Sbjct: 602 SKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 215/392 (54%), Gaps = 9/392 (2%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCD 70
            S  TQ + +HK  +      PS  Y + S  LLE C S K L   +++   + + G+  
Sbjct: 36  QSFATQLIPQHK--VDSFPSSPSNHYYYAS--LLESCISAKALEPGKQLHARLCQLGIAY 91

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
                TKLV+ +   NSL +A  +F+ IP     L++ +++ YA     + A+S   +M 
Sbjct: 92  NLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQML 151

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
              + P  +   ++LK C  +  I  G+ IH ++I +G+  D+F    +V+MYAKCG + 
Sbjct: 152 EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVV 211

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           +A  +FD++ +RD V WN+++A +AQNG  + +L L   M  +G R    T+V+++ + A
Sbjct: 212 DARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSA 271

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           ++  L  G+ +HG+  R GF     V TAL+DMYAKCG V+ A ++F+ ++ + VVSWN+
Sbjct: 272 DIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNA 331

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQL 369
           +I  Y   G   EA+ +F++M+ +  +P ++T + AL AC+    L+ G  ++ L+    
Sbjct: 332 IITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDC 390

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           ++   V     ++ +   C ++D A D+  ++
Sbjct: 391 RINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM 422


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/563 (43%), Positives = 363/563 (64%), Gaps = 9/563 (1%)

Query: 258 GKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           G+ +H  A+R+G F S    ++AL+ MY  C R   AR  FD + S N V   +M + YV
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 317 EGGNPEEAMRIFQKMLDQGVEPT--NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
                  ++ +F+K++  G          + A  A A + D      +H L+ +  L  D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 375 VSMTNSLISMYSKCKKVDRAA--DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
             + N+++  Y+K  + D  A   +F  ++ K +VSWN+MI  YAQNG   +AL  + KM
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 433 R--SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
              S +IK ++ T+ +++ A A    I+  K IH  V+R   E+NV+V T+++DMY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            V  AR  F  + E+++ +W+ MI GYG HG G+ A+++FN+M      PN ITF+  ++
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSH+GL+++G +++ ++KK +GIEP ++HYG MVDLLGRAG L+EA+  I++M ++P  
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            ++GA+L AC+IHKNVEL E +A RLFELD    GY+VLL+NIYA A MW  + ++R ++
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
           + +G++K PG S VELK   H FY G   HPQ K IY++L  L+++++ AGYVP+T S+ 
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           HD+++  + + L  HSEKLAIAF L+NS PGS IH+ KNLRVC DCH A K I+ +  RE
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           IIVRD+ RFH FK+G CSCGDYW
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 195/375 (52%), Gaps = 28/375 (7%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS---DAARVFEPIPDKLDALYHTMLKGY 113
           R++  L I+SGL     F     +L   YN  S   DA + F+ IP     +   M  GY
Sbjct: 109 RQLHLLAIRSGLFPSDPFSAS--ALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGY 166

Query: 114 AKFASLDDAVSFLIRM-------RYDDVAPVV-YNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            +   +  +++   ++         D+ A +V ++ +  +  CG          +H  ++
Sbjct: 167 VRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGIT------SSLHALVV 220

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQ--IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
             G   D   +  +++ YAK G+  +  A K+FD M E+D+VSWN+++A +AQNG +  A
Sbjct: 221 KTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADA 279

Query: 224 LDLVTRM-HEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           L L  +M +  G  + + +T+ +IL A A+ G+++ GK +H   +R G +  V V T++V
Sbjct: 280 LGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVV 339

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY+KCGRVE AR  F  +K +N++SW++MI  Y   G+ +EA+ IF +M   G  P  +
Sbjct: 340 DMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYI 399

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTD--VSMTNSLISMYSKCKKVDRAADIFS 399
           T +  L AC+  G L++G + +  + + + G +  V     ++ +  +   +D A  +  
Sbjct: 400 TFISVLAACSHAGLLDKGRYWYNAMKK-RFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIK 458

Query: 400 KLQGKTLVS-WNAMI 413
           +++ K   + W A++
Sbjct: 459 EMKVKPDAAIWGALL 473



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 147/328 (44%), Gaps = 18/328 (5%)

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           SW++ +   +  G+P  A+  F   L          +  A  A A    L  G  +H L 
Sbjct: 56  SWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAAATSLAAGRQLHLLA 115

Query: 367 DQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
            +  L  +D    ++L+ MY+ C +   A   F ++     V   AM  GY +N  V  +
Sbjct: 116 IRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPS 175

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSV------IRYAKWIHALVIRSCFEKNVFVM 479
           L  F K+    I   S T V    AL   S             +HALV+++  + +  V+
Sbjct: 176 LALFRKL----IASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVV 231

Query: 480 TALIDMYAKCGA--VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML--E 535
             ++D YAK G   +G AR +FD M E+ V +WN MI  Y  +G+   A+ L+ KML   
Sbjct: 232 NTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVS 290

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
           G  K N +T    + AC+H+G ++ G      + +  G+E  +    ++VD+  + GR+ 
Sbjct: 291 GSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR-MGLEENVYVGTSVVDMYSKCGRVE 349

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIH 623
            A    QK+  E  I  + AM+    +H
Sbjct: 350 MARKAFQKIK-EKNILSWSAMITGYGMH 376


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/754 (35%), Positives = 427/754 (56%), Gaps = 10/754 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G C        L++ + K     DA  +F+ +P++ +  Y T+ +GYA      D 
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA----CQDP 130

Query: 123 VSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           V    R+  +  ++ P V+     L V  D  EI     +H  ++  G+  + F    ++
Sbjct: 131 VGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI--CWWLHSPIVKLGYDSNAFVGAALI 188

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           N Y+ CG ++ A  +F+ +  +D+V W  IV+ + +NG  E +L L++RM  +G   +  
Sbjct: 189 NAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNY 248

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  + L A   +G+    K+VHG  ++  ++    V   L+ +Y + G +  A  VF+ M
Sbjct: 249 TFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +VV W+ MIA + + G   +A+ IF +M +  V P   T+   L+ CA       G 
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGE 368

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H L+ ++    DV ++N+LI +Y+KC+K+D A  +F++L  K +VSWN +I+GY   G
Sbjct: 369 QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLG 428

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +ALN F +     +     T  S + A A L+ +     +H L I++   K V V  
Sbjct: 429 EGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSN 488

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +LIDMYAKCG +  A+ +F+ M    V +WN +I GY THGLG+ A+ +F+ M     KP
Sbjct: 489 SLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKP 548

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TFL  +S CS++GL+++G   F S+  D+GIEP ++HY  MV L GR+G+L++A + 
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNL 608

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+ +P EP + ++ AML A     N E   ++A  + +++P +   +VLL+N+YA A  W
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQW 668

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             +A +R  M++KG++K PG S +E + +VH F  GS+ HP  K I   LE L  +   A
Sbjct: 669 ANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRA 728

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN-SSPGSTIHIRKNLRVCGDCHNA 778
           GYVPD N++  D++D  ++  L  HSE+LA+A+GL+   S  + I I KNLR+C DCH+A
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K IS +  R++++RDM+RFH F  GVCSC D+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 260/511 (50%), Gaps = 14/511 (2%)

Query: 132 DDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           D V P + ++ Y  +L+ C    +    K IH  ++  G  LDLFA   ++N Y K G  
Sbjct: 41  DSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           ++A  +FD MPER+ VS+ T+  G+A     +  + L +R+H EG   +     S L   
Sbjct: 101 KDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLF 156

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
            ++    I   +H   ++ G+DS   V  AL++ Y+ CG V++AR VF+G+  +++V W 
Sbjct: 157 VSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWA 216

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +++ YVE G  E+++++  +M   G  P N T   AL A   LG       VH  + + 
Sbjct: 217 GIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT 276

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               D  +   L+ +Y++   +  A  +F+++    +V W+ MI  + QNG  N+A++ F
Sbjct: 277 CYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIF 336

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +MR   + P+ FT+ S++   A        + +H LV++  F+ +V+V  ALID+YAKC
Sbjct: 337 IRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKC 396

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             + TA  LF  ++ ++V +WN +I GY   G G  A+ +F + L       ++TF  A+
Sbjct: 397 EKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSAL 456

Query: 550 SACSHSGLVEEGIH-YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
            AC+    +E G+  +  ++K +      + +  +++D+  + G +  A     +M    
Sbjct: 457 GACASLASMELGVQVHGLAIKTNNAKRVAVSN--SLIDMYAKCGDIKVAQTVFNEMET-I 513

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFEL 639
            +  + A++     H    LG +A  R+F++
Sbjct: 514 DVASWNALISGYSTHG---LGRQAL-RIFDI 540



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 132/285 (46%), Gaps = 4/285 (1%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C+ L E  ++  L++K G          L+ ++ K   +  A ++F  +  K    ++T+
Sbjct: 363 CSGLGE--QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTV 420

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + GY        A++       + V+     ++  L  C  +  +  G ++HG  I    
Sbjct: 421 IVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN 480

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +     +++MYAKCG I+ A  +F+ M   D+ SWN +++G++ +G    AL +   
Sbjct: 481 AKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDI 540

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M     + + +T + +L   +N G +  G+          G +  +   T +V ++ + G
Sbjct: 541 MKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSG 600

Query: 289 RVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           +++ A  + +G+    +V+ W +M++A +   N E A R  +++L
Sbjct: 601 QLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEIL 645


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/655 (38%), Positives = 384/655 (58%), Gaps = 34/655 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ + E +L+ WNT+  G A +     AL L   M   G   +  T   +L + A 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY--------------------------- 284
           + + + G  +HG+ ++ G++  + V T+L+ MY                           
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 285 ----AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
               A  G +E+AR +FD +  ++VVSWN+MI+ YVE GN +EA+ +F++M+   V P  
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T++  + A A  G +E G  VH  +     G+++ + N+LI  YSKC +++ A  +F  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K ++SWN +I GY       EAL  F +M      P+  TM+S++ A A L  I   
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 461 KWIHALVIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +WIH  + +          + T+LIDMY+KCG +  A  +F+ M  + +  WN MI G+ 
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG   AA ++F++M +   KP+DITF+  +SACSH+G+++ G H F S+  +Y I P +
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKL 435

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HYG M+DLLG +G   EA + I  M +EP   ++ ++L ACK+H NVELGEK A  LF+
Sbjct: 436 EHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK 495

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           ++P+  G +VLL+NIYA A  W+++A++R ++  KG++K PGCS +E+ + VH F  G  
Sbjct: 496 IEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 555

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP+++ IY  LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++
Sbjct: 556 FHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLIST 615

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            P + + I KNLRVC +CH ATK IS +  REII RD  RFH F++GVCSC DYW
Sbjct: 616 KPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 171/551 (31%), Positives = 274/551 (49%), Gaps = 80/551 (14%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           +  L  A  VFE I +    +++TM +G+A       A+   + M    + P  Y + +L
Sbjct: 10  FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------ 198
           LK C  +   + G +IHG ++  G+ LDL+  T +++MY +  ++E+A+K+FDR      
Sbjct: 70  LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129

Query: 199 -------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                                    +P +D+VSWN +++G+ + G  + AL+L   M + 
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             R D  T+V+++ A A  GS+ +G+ VH +    GF S + +  AL+D Y+KCG +ETA
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F G+  ++V+SWN +I  Y      +EA+ +FQ+ML  G  P +VT++  LHACA L
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309

Query: 354 GDLERGIFVHKLLDQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           G ++ G ++H  +D+ LK  T+  S+  SLI MYSKC  ++ A  +F+ +  K+L +WNA
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNA 369

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI G+A +GR N A + F +MR   IKPD  T V ++ A +           HA      
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACS-----------HA------ 412

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGKAA 526
                             G +   R +F  M   +  T     +  MID  G  GL K A
Sbjct: 413 ------------------GMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA 454

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMV 585
            E+ + M     +P+ + +   + AC   G VE G  +  +L K   IEP     Y  + 
Sbjct: 455 EEMISTM---TMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK---IEPNNPGSYVLLS 508

Query: 586 DLLGRAGRLNE 596
           ++   AGR NE
Sbjct: 509 NIYATAGRWNE 519



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 189/386 (48%), Gaps = 13/386 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV+ +     +  A  +F+ IP K    ++ M+ GY +  +  +A+     M   +V 
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       ++      G I  G+++H  +  +GF  +L  +  +++ Y+KCG++E A  +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  +  +D++SWN ++ G+      + AL L   M   G   + +T++SIL A A++G++
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 256 RIGKAVHGYAMR--AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            IG+ +H Y  +   G  +  ++ T+L+DMY+KCG +E A  VF+ M  +++ +WN+MI 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLERGIFVHKLLDQLKL 371
            +   G    A  IF +M    ++P ++T +  L AC+  G  DL R IF   +    K+
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIF-RSMTHNYKI 431

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMILGYAQNGRVNE----AL 426
              +     +I +         A ++ S +  +   V W +++     +G V      A 
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQ 491

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALA 452
           N F K+   N  P S+ ++S I A A
Sbjct: 492 NLF-KIEPNN--PGSYVLLSNIYATA 514



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 4/183 (2%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           G+ +    +T L+ ++ K   +  A +VF  +  K    ++ M+ G+A     + A    
Sbjct: 328 GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIF 387

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAK 185
            RMR +++ P    +  LL  C   G +  G+ I   +  N   +  L     ++++   
Sbjct: 388 SRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGH 447

Query: 186 CGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMH--EEGRRGDFITI 242
            G  +EA +M   M  E D V W +++     +G  EL       +   E    G ++ +
Sbjct: 448 SGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLL 507

Query: 243 VSI 245
            +I
Sbjct: 508 SNI 510


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 366/609 (60%), Gaps = 4/609 (0%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SWN  +   A+    + AL+L  +M   G   +  T      + A++     G  +HG+ 
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNV-VSWNSMIAAYVEGGNPEE 323
           ++ G +    V T+L+ MY KC  + +AR VFD    SRN+ V +N++IA Y       +
Sbjct: 83  IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F++M  +GV    VT++  +  CA    L  G  +H    +  L  D+S+ N L++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY +C  VD A  +F  +  K L++WNAMI GYAQNG     L+ + KM    I PD  T
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           +V V+ + A L      + +   +  S F  N F+  ALI+MYA+CG +  ARA+FD M 
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           E++V +W  +I GYG HG G+ AV+LF++M+     P+   F+  +SACSH+GL E+G++
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           YFT++++DYG++P  +HY  +VDLLGRAGRL EA   I  M +EP   V+GA+LGACKIH
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           +NVEL E A  ++ E +P   GY+VLL+NI++ A   + + +VR +M ++ L+K PGCS 
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSS 743
           VE +  +H F +G   HPQ++ IY  L+ L D IK  G   D +     E+ +    +  
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITG--MGV 560

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLAIAFGL+N+ PG+ I + KNLRVCGDCH   K +S +  R+++VRD  RFH FKN
Sbjct: 561 HSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKN 620

Query: 804 GVCSCGDYW 812
           GVCSC DYW
Sbjct: 621 GVCSCKDYW 629



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 225/451 (49%), Gaps = 6/451 (1%)

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
           A ++  L+  A+     +A++   +M     +P  + + +  K C  +     G ++HG 
Sbjct: 22  ASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGH 81

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-MPERDL-VSWNTIVAGFAQNGFAE 221
           +I  G   + F  T +++MY KC  I  A K+FD     R+L V +N ++AG++ N    
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+ L  +M +EG   + +T++ ++P  A    L  G ++H  ++R G D  ++V   L+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY +CG V+ AR +FDGM  + +++WN+MI+ Y + G     + +++KM   G+ P  V
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T++  L +CA LG    G  V + ++    G +  + N+LI+MY++C  + +A  IF  +
Sbjct: 262 TLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM 321

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             K ++SW A+I GY  +G+   A+  F +M S +  PD    VSV+ A +   +     
Sbjct: 322 TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGL 381

Query: 462 WIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
           +    + R    +      + ++D+  + G +  AR L   M+ E     W  ++     
Sbjct: 382 YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKI 441

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           H   + A   F K++E   +P +I +   +S
Sbjct: 442 HRNVELAELAFEKVIE--FEPTNIGYYVLLS 470



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 167/308 (54%), Gaps = 2/308 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYAKFASLD 120
           +IK+G   +   QT L+S++CK ++++ A +VF+       L   Y+ ++ GY+  +   
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           DAV    +MR + V+        L+ VC     +  G  +H   +  G   DL     ++
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY +CG ++ A K+FD MPE+ L++WN +++G+AQNG A   LDL  +M   G   D +
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+V +L + A++G+   G+ V      +GF     +  AL++MYA+CG +  AR +FDGM
Sbjct: 262 TLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM 321

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             +NV+SW ++IA Y   G  E A+++F +M+     P     +  L AC+  G  E+G+
Sbjct: 322 TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGL 381

Query: 361 FVHKLLDQ 368
           +    +++
Sbjct: 382 YYFTAMER 389



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 16/222 (7%)

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
            T  SWNA +   A+     EALN +C+M +    P++FT      + A LS+      +
Sbjct: 19  NTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQL 78

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYG 518
           H  VI++  E   FV T+LI MY KC  + +AR +FD   E H        +N +I GY 
Sbjct: 79  HGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFD---ENHHSRNLAVCYNALIAGYS 135

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK---DYGIE 575
            +     AV LF +M +     N +T L  I  C  +G +  G  + TSL      +G++
Sbjct: 136 LNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLG--FGTSLHACSVRFGLD 191

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
             +     ++ +  R G ++ A      MP E G+  + AM+
Sbjct: 192 GDLSVGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMI 232


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/656 (35%), Positives = 382/656 (58%), Gaps = 1/656 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K++H  LI +    D F +  ++       Q   ++ +F      ++  +NT++ GF  N
Sbjct: 30  KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                 LDL   + + G      T   +L A     + ++G  +H   ++ GF+  V   
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+ +Y+  GR+  A  VF+ +  R+VV+W ++ + Y   G   EA+ +F+KM++ GV 
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P +  I++ L AC  +GDL+ G ++ K ++++++  +  +  +L+++Y+KC K+++A  +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  K +V+W+ MI GYA N    E + +F +M  +N+KPD F++V  + + A L  +
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              +W  +L+ R  F  N+F+  ALIDMYAKCGA+     +F  M E+ +   N  I G 
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G  K +  +F +  +    P+  TFL  +  C H+GL+++G+ +F ++   Y ++  
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG MVDL GRAG L++A+  I  MP+ P   V+GA+L  C++ K+ +L E     L 
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
            L+P   G +V L+NIY+ +  WD+ A+VR +M +KG++K PG S +EL+  VH F +  
Sbjct: 510 ALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADD 569

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
             HP S +IY  LE L +E++  G+VP T  +  DVED  +E +L  HSEKLA+AFGL++
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLIS 629

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  G  I + KNLRVCGDCH   K IS +T REI+VRD +RFHCF NG CSC DYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 247/494 (50%), Gaps = 37/494 (7%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           LY+T++ G+       + +   + +R   +    + +  +LK C      + G ++H  +
Sbjct: 78  LYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLV 137

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF+ D+ AMT ++++Y+  G++ +A+K+F+ +PER +V+W  + +G+   G    A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           DL  +M E G R D   IV +L A  +VG L  G+ +  +           V T LV++Y
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           AKCG++E AR VFD M  +++V+W++MI  Y     P+E +  F +ML + ++P   +I+
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +CA LG L+ G +   L+D+ +  T++ M N+LI MY+KC  + R  ++F +++ K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V  NA I G A+NG V  +   F +     I PD  T + ++              +H
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VH 426

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A +I+              D      A+    AL     +R V  +  M+D +G  G+  
Sbjct: 427 AGLIQ--------------DGLRFFNAISCVYAL-----KRTVEHYGCMVDLWGRAGMLD 467

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV-MDHYGA 583
            A  L   M   P +PN I +   +S C    LV++     T LK+   +EP    +Y  
Sbjct: 468 DAYRLICDM---PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521

Query: 584 MVDLLGRAGRLNEA 597
           + ++   +GR +EA
Sbjct: 522 LSNIYSVSGRWDEA 535



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 45  LLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           L+L+ CT     +    +  L++K G        T L+S++     L+DA +VFE IP++
Sbjct: 116 LVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPER 175

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  +  GY       +A+    +M    V P  Y    +L  C  VG++  G+ I 
Sbjct: 176 SVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIV 235

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +       + F  T +VN+YAKCG++E+A  +FD M E+D+V+W+T++ G+A N F +
Sbjct: 236 KHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPK 295

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             ++   +M +E  + D  +IV  L + A++G+L +G+       R  F + + ++ AL+
Sbjct: 296 EGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAKCG +     VF  MK +++V  N+ I+   + G+ + +  +F +    G+ P   
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L  C   G ++ G+ F + +     L   V     ++ ++ +   +D A  +   
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475

Query: 401 LQGK-TLVSWNAMILG 415
           +  +   + W A++ G
Sbjct: 476 MPMRPNAIVWGALLSG 491


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/713 (35%), Positives = 398/713 (55%), Gaps = 75/713 (10%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           A T +V  +A  G++ +A   FD +P   RD V  N +++ FA+   A  A+ +   +  
Sbjct: 96  AATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG 155

Query: 233 EGR-RGDFITIVSILPAVANVGSLRIGKA--VHGYAMRAGFDSIVNVSTALVDMYAKC-- 287
            G  R D  +  +++ AV  + +L       +H   +++G  ++++VS AL+ +Y KC  
Sbjct: 156 SGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 215

Query: 288 --------------------------------GRVETARLVFDGMKSRNVVSWNSMIAAY 315
                                           G V  AR VF+ +  +  V WN+MI+ Y
Sbjct: 216 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 275

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--- 372
           V+ G   +A  +F++M+ + V     T    L ACA+ G    G  VH  + +L+     
Sbjct: 276 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 335

Query: 373 -TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA-------------------- 411
              + + N+L+++YSK  K+  A  IF  +  K +VSWN                     
Sbjct: 336 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 395

Query: 412 -----------MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
                      M+ GY   G   +AL  F +MR++++KP  +T    I A  EL  +++ 
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + +HA +++  FE +     AL+ MYAKCGAV  AR +F +M      +WN MI   G H
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 515

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G+ A+ELF++M+     P+ I+FL  ++AC+H+GLV+EG HYF S+K+D+GI P  DH
Sbjct: 516 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 575

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  ++DLLGR+GR+ EA D I+ MP EP  +++ A+L  C+ + ++E G  AA++LF + 
Sbjct: 576 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 635

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P   G ++LL+N Y+AA  W   A+VR +M  +G++K PGCS +E+ +++H F  G TKH
Sbjct: 636 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKH 695

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
           P+++ +Y FLE +   ++  GYVPDT  + HD+E + +E +L +HSEKLA+ FGLL   P
Sbjct: 696 PEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPP 755

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+T+ + KNLR+CGDCH A  ++S   GREI+VRD+ RFH FK+G CSCG+YW
Sbjct: 756 GATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 389/711 (54%), Gaps = 38/711 (5%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +   +LL   G  G   R + +           +LF    +++  A    +++   +
Sbjct: 39  PPTHLLNHLLTAYGKAGRHARARRVFDATP----HPNLFTYNALLSTLAHARLLDDMDSL 94

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVG 253
           F  M +RD VS+N ++AGF+  G    A+ L   +   G   R   IT+ +++ A + +G
Sbjct: 95  FASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALG 154

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK--------------------------- 286
              +G+  H   +R GF     V + LV MYAK                           
Sbjct: 155 DRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMIT 214

Query: 287 ----CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
               C  VE AR +F+ M  R+ ++W +M+  + + G   +A+  F++M  QG+     T
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYT 274

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L AC  L  LE+G  +H  + +     +V + ++L+ MYSKC+ +  A   F ++ 
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SW A+I+GY QNG   EA+  F +M+   I PD FT+ SVI + A L+ +     
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H L + S     + V  AL+ +Y KCG++  A  LFD M      +W  ++ GY   G 
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            K  ++LF KML    KP+ +TF+  +SACS +G VE+G  YF S++KD+GI P+ DHY 
Sbjct: 455 AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYT 514

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            M+DL  R+GRL EA +FI++MP+ P    +G +L AC++  ++E+G+ AA  L E+DP 
Sbjct: 515 CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQ 574

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
               +VLL +++A    W+++A++R  M  + ++K PGCS ++ KN+VH F +    HP 
Sbjct: 575 NPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 634

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           SK IY  LE L  ++   GY PD +S+ HDV D  + +++S HSEKLAIAFGL+      
Sbjct: 635 SKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEM 694

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCHNATK IS +TGR+I+VRD  RFH F NGVCSCGD+W
Sbjct: 695 PIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 242/513 (47%), Gaps = 42/513 (8%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF---LIRMRYDDV 134
           L+S       L D   +F  +  +    Y+ ++ G++   +   AV     L+R     V
Sbjct: 78  LLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAG-SSV 136

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK--------- 185
            P     + ++     +G+   G++ H Q++  GF ++ F  + +V MYAK         
Sbjct: 137 RPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKR 196

Query: 186 ----------------------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
                                 C  +EEA ++F+ M +RD ++W T+V GF QNG    A
Sbjct: 197 VFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQA 256

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L+   RM  +G   D  T  SIL A   + +L  GK +H Y +R  +D  V V +ALVDM
Sbjct: 257 LNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDM 316

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y+KC  ++ A   F  M  +N++SW ++I  Y + G  EEA+R+F +M   G++P + T+
Sbjct: 317 YSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTL 376

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              + +CA+L  LE G   H L     L   ++++N+L+++Y KC  ++ A  +F ++  
Sbjct: 377 GSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLF 436

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKW 462
              VSW A++ GYAQ GR  E ++ F KM +K++KPD  T + V+ A +    + +   +
Sbjct: 437 HDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSY 496

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
            H++             T +ID+Y++ G +  A      M        W  ++      G
Sbjct: 497 FHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556

Query: 522 ---LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              +G+ A E  N +   P  P     LC++ A
Sbjct: 557 DMEIGQWAAE--NLLEIDPQNPASYVLLCSMHA 587



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 178/331 (53%), Gaps = 4/331 (1%)

Query: 73  LFQTKLVSLF-CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           ++ T +  L  CK   + +A R+FE + D+    + TM+ G+ +      A++F  RMR+
Sbjct: 208 MYNTMITGLLRCKM--VEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             +A   Y +  +L  CG +  + +GK+IH  +I   +  ++F  + +V+MY+KC  I+ 
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A   F RM  ++++SW  ++ G+ QNG +E A+ + + M  +G   D  T+ S++ + AN
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           + SL  G   H  A+ +G    + VS ALV +Y KCG +E A  +FD M   + VSW ++
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTAL 445

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLK 370
           +  Y + G  +E + +F+KML + V+P  VT +  L AC+  G +E+G  + H +     
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHG 505

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +         +I +YS+  ++  A +   ++
Sbjct: 506 IVPIDDHYTCMIDLYSRSGRLKEAEEFIKQM 536



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 152/325 (46%), Gaps = 10/325 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C +L  L   ++I   II++   D     + LV ++ K  S+  A   F  +  K 
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GY +    ++AV     M+ D + P  +    ++  C ++  +  G + H 
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHC 397

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +V+G    +     +V +Y KCG IE+A+++FD M   D VSW  +V G+AQ G A+ 
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKE 457

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALV 281
            +DL  +M  +  + D +T + +L A +  G +  G +  H      G   I +  T ++
Sbjct: 458 TIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMI 517

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PT 339
           D+Y++ GR++ A      M    + + W ++++A    G+ E      + +L+   + P 
Sbjct: 518 DLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPA 577

Query: 340 NVTIMEALHACA----DLGDLERGI 360
           +  ++ ++HA       +  L RG+
Sbjct: 578 SYVLLCSMHATKGNWNQVAQLRRGM 602


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/571 (44%), Positives = 359/571 (62%), Gaps = 2/571 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L +     SL  G+ +HG  + +G      ++T LVD+YA CG V  AR +FDGM  R
Sbjct: 67  SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           NV  WN +I AY   G  E A+++++ M+D GVEP N T   AL ACA L DLE G  VH
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           + +     G D+ +   L+ MY+KC  VD A  +F +++ +  V WN+MI  Y QNGR  
Sbjct: 187 ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPM 246

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EAL+    M +  + P   T+VS I A A+ + +   + +H    R  F++   + T+L+
Sbjct: 247 EALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLV 306

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPND 542
           DMYAK G V  AR LF+ + +R + +WN MI GYG HG    A++LFNKM +E    P++
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDN 366

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           ITF+  +SAC+H G+V+E   +F  +   Y I+P + H+  +VD+LG AGR  EA+D I+
Sbjct: 367 ITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIK 426

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            MP++P   ++GA+L  CKIHKNVELGE A  +L EL+P++ G +VLL+NIYA +  W+K
Sbjct: 427 GMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEK 486

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
            A+VR +M  +GL+K  GCS +ELK + H F  G   HP+S  IY  LE L   +  AGY
Sbjct: 487 AARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGY 546

Query: 723 VPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           +PDT  + HDV D  + N++ SHSE+LAIAFGL+++  G+ + + KNLRVC DCH   K 
Sbjct: 547 MPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKL 606

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS +  REII+RD++R+H F NG CSC DYW
Sbjct: 607 ISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 205/384 (53%), Gaps = 9/384 (2%)

Query: 39  YRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           Y H +++L + C + + L   R++   ++ SGL    +  TKLV L+     +  A R+F
Sbjct: 62  YHHYTSVL-QSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF 120

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           + +P +   L++ +++ YA+    + A+     M    V P  + Y   LK C  + ++ 
Sbjct: 121 DGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLE 180

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            G+E+H +++   +  D+F   G+V+MYAKCG +++A  +FDR+  RD V WN+++A + 
Sbjct: 181 TGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYG 240

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           QNG    AL L   M   G      T+VS + A A+  +L  G+ +HG+  R GFD    
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQ 334
           + T+LVDMYAK G V+ AR++F+ +  R +VSWN+MI  Y   G+ +EA+++F KM ++ 
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360

Query: 335 GVEPTNVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            V P N+T +  L AC   G + E   F   ++D   +   V     L+ +     + + 
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEE 420

Query: 394 AADIFS--KLQGKTLVSWNAMILG 415
           A D+     +Q  + + W A++ G
Sbjct: 421 AYDLIKGMPMQPDSGI-WGALLNG 443


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/559 (42%), Positives = 348/559 (62%), Gaps = 2/559 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  G+ VHG+ +++ F   + ++  L++MYAKCG +E AR VFD M  R+ V+W ++I+ 
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y +   P +A+ +F +ML  G  P   T+   + A A       G  +H    +    ++
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V + ++L+ +Y++   +D A  +F  L+ +  VSWNA+I G+A+     +AL  F  M  
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +  +P  F+  S+  A +    +   KW+HA +I+S  +   F    L+DMYAK G++  
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 306

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +FD + +R V +WN ++  Y  HG G  AV  F +M  G  +PN+I+FL  ++ACSH
Sbjct: 307 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSH 366

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           SGL++EG HY+  +KKD GI     HY  +VDLLGRAG LN A  FI++MPIEP   ++ 
Sbjct: 367 SGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 425

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+L AC++HKN ELG  AA  +FELDPD+ G HV+L NIYA+   W+  A+VR  M++ G
Sbjct: 426 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 485

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVE 733
           ++K P CS VE++N +H F +   +HPQ + I    E ++ +IK  GYVPDT+  I  V+
Sbjct: 486 VKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVD 545

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
              +E  L  HSEK+A+AF LLN+ PGSTIHI+KN+RVCGDCH+A K  S   GREIIVR
Sbjct: 546 QQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVR 605

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFH FK+G CSC DYW
Sbjct: 606 DTNRFHHFKDGACSCKDYW 624



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 217/392 (55%), Gaps = 4/392 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LLK C     + +G+ +HG LI + F  DL     ++NMYAKCG +EEA K+FD+MP
Sbjct: 54  YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ERD V+W T+++G++Q+     AL L  +M   G   +  T+ S++ A A       G  
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG+ ++ GFDS V+V +AL+D+Y + G ++ A+LVFD ++SRN VSWN++IA +     
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+A+ +FQ ML +G  P++ +      AC+  G LE+G +VH  + +          N+
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K   +  A  IF +L  + +VSWN+++  YAQ+G  NEA+ +F +MR   I+P+
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALF 499
             + +SV+ A +   ++      + L+ +       +    ++D+  + G +  A R + 
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIE 413

Query: 500 DMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           +M  E     W  +++    H    LG  A E
Sbjct: 414 EMPIEPTAAIWKALLNACRMHKNTELGAYAAE 445



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 196/386 (50%), Gaps = 6/386 (1%)

Query: 32  AYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSL 88
           +YIP  + R     LL+ CT  K L   R +   +I+S      +    L++++ K  SL
Sbjct: 45  SYIP--VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSL 102

Query: 89  SDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
            +A +VF+ +P++    + T++ GY++     DA+    +M     +P  +  + ++K  
Sbjct: 103 EEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAA 162

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
                   G ++HG  +  GF  ++   + ++++Y + G +++A  +FD +  R+ VSWN
Sbjct: 163 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 222

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++AG A+    E AL+L   M  EG R    +  S+  A ++ G L  GK VH Y +++
Sbjct: 223 ALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 282

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G   +      L+DMYAK G +  AR +FD +  R+VVSWNS++ AY + G   EA+  F
Sbjct: 283 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWF 342

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           ++M   G+ P  ++ +  L AC+  G L+ G   ++L+ +  +  +     +++ +  + 
Sbjct: 343 EEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRA 402

Query: 389 KKVDRAADIFSKLQ-GKTLVSWNAMI 413
             ++RA     ++    T   W A++
Sbjct: 403 GDLNRALRFIEEMPIEPTAAIWKALL 428



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 39/312 (12%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+ +Y  + DA  VF+ +  + D  ++ ++ G+A+    + A+     M  +   
Sbjct: 191 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFR 250

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  ++Y  L   C   G + +GK +H  +I +G  L  FA   +++MYAK G I +A K+
Sbjct: 251 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 310

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDR+ +RD+VSWN+++  +AQ+GF   A+     M   G R + I+ +S+L A ++ G L
Sbjct: 311 FDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLL 370

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
             G   +    + G          +VD+  + G +  A    + M      + W +++ A
Sbjct: 371 DEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430

Query: 315 ----------------------------------YVEGGNPEEAMRIFQKMLDQGV--EP 338
                                             Y  GG   +A R+ +KM + GV  EP
Sbjct: 431 CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 490

Query: 339 --TNVTIMEALH 348
             + V I  A+H
Sbjct: 491 ACSWVEIENAIH 502


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/591 (42%), Positives = 363/591 (61%), Gaps = 8/591 (1%)

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD---M 283
           VT M       +    +S+LP      SLR  K +  +A++    S ++V T  ++   +
Sbjct: 8   VTPMCPPNSNSNTTHPLSLLPKCT---SLRELKQLQAFAIKTHLHSDLSVLTKFINFCSL 64

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
                 ++ A  +FD +   ++V +N+M   Y     P  A  +F ++L  G+ P + T 
Sbjct: 65  NPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTF 124

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L ACA    LE G  +H L  +L L  +V +  +LI+MY+ C ++D A  +F K+  
Sbjct: 125 PSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWE 184

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
             +V++NAMI GYA+  R NEAL+ F +++++N+KP   TM+SV+ + A L  +   KW+
Sbjct: 185 PCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWM 244

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  V ++ F + V V TALIDMYAKCG++  A  +F+ M  R    W+ MI  Y  HG G
Sbjct: 245 HEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHG 304

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
             AV LF +M +  T+P++ITFL  + ACSH+GLVEEG  YF  ++  YG+ P + HYG 
Sbjct: 305 LKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGC 364

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           MVDLLGRAGRL EA++FI  +PI P   ++  +L AC  H NVELG++   ++FELD   
Sbjct: 365 MVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSH 424

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
           GG +++L+N+ A A  W+ +  VR +M ++G+ K PGCS VE+ N VH F+SG   H  S
Sbjct: 425 GGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVS 484

Query: 704 KRIYTFLETLIDEIKAAGYVPDTNSIH--DVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            +++  L+ L+ E+K  GYVP+T+ +   D+ED  +E  L  HSEKLAI FGLLN+ PG+
Sbjct: 485 TKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGT 544

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TI + KNLRVCGDCH+A K ISL+  R+II+RD+ RFH FK+G CSC DYW
Sbjct: 545 TIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 208/388 (53%), Gaps = 8/388 (2%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN----SLSDAARVFE 96
           HP +LL + CTSL+EL+++    IK+ L       TK ++ FC  N    S+  A  +F+
Sbjct: 22  HPLSLLPK-CTSLRELKQLQAFAIKTHLHSDLSVLTKFIN-FCSLNPTTTSMQHAHHLFD 79

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            IP     L++TM +GYA+  +   A +   ++ +  + P  Y +  LLK C     +  
Sbjct: 80  QIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G+++H   I  G S +++    ++NMY  C +++ A ++FD++ E  +V++N ++ G+A+
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR 199

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
                 AL L   +     +   +T++S+L + A +G+L +GK +H Y  + GF+  V V
Sbjct: 200 GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TAL+DMYAKCG ++ A  VF+ M  R+  +W++MI AY   G+  +A+ +F++M   G 
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGT 319

Query: 337 EPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           EP  +T +  L+AC+  G +E G  + + + D+  +   +     ++ +  +  +++ A 
Sbjct: 320 EPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAY 379

Query: 396 DIFSKLQGK-TLVSWNAMILGYAQNGRV 422
           +    L  + T + W  ++     +G V
Sbjct: 380 EFIVGLPIRPTPILWRTLLSACGSHGNV 407


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/573 (41%), Positives = 361/573 (63%), Gaps = 5/573 (0%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           + + +L    NV  +R    VH + +  G    + ++  L+  YA+   ++ A  +FDG+
Sbjct: 5   SCIDLLLRCRNVFHIR---QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL 61

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R+  +W+ M+  + + G+       F+++L  GV P N T+   +  C D  DL+ G 
Sbjct: 62  TMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H ++ +  L +D  +  SL+ MY+KC  V+ A  +F ++  K LV+W  MI  YA + 
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DC 180

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              E+L  F +MR + + PD   MV+V+ A A+L  +  A++ +  ++R+ F  +V + T
Sbjct: 181 NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGT 240

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           A+IDMYAKCG+V +AR +FD M E++V +W+ MI  YG HG GK A++LF+ ML     P
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILP 300

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TF+  + ACSH+GL+EEG+ +F S+ +++ + P + HY  MVDLLGRAGRL+EA   
Sbjct: 301 NRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRL 360

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+ M +E    ++ A+LGAC+IH  +EL EKAAN L EL P   G++VLL+NIYA A  W
Sbjct: 361 IEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKW 420

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           +K+AK R +M ++ L+K PG + +E+ N+ + F  G   HPQSK IY  L +LI +++ A
Sbjct: 421 EKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMA 480

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDT+ +  DVE+ V++ +L +HSEKLAIAFGL+    G  I I KNLRVCGDCH  +
Sbjct: 481 GYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFS 540

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K +S +  R IIVRD +RFH F +G CSCGDYW
Sbjct: 541 KMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 220/412 (53%), Gaps = 8/412 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  C ++  +R++   ++ +G     +   KL+  + ++ ++ DA  +F+ +  +    
Sbjct: 9   LLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKT 68

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +  M+ G+AK        +    +    V P  Y   ++++ C D  +++ G+ IH  ++
Sbjct: 69  WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVL 128

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            +G   D F    +V+MYAKC  +E+A ++F+RM  +DLV+W  ++  +A     E +L 
Sbjct: 129 KHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLV 187

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L  RM EEG   D + +V+++ A A +G++   +  + Y +R GF   V + TA++DMYA
Sbjct: 188 LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYA 247

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG VE+AR VFD MK +NV+SW++MIAAY   G  ++A+ +F  ML   + P  VT + 
Sbjct: 248 KCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVS 307

Query: 346 ALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-G 403
            L+AC+  G +E G+ F + + ++  +  DV     ++ +  +  ++D A  +   +   
Sbjct: 308 LLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVE 367

Query: 404 KTLVSWNAMILG---YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           K    W+A++     +++     +A N   +++ +N  P  + ++S I A A
Sbjct: 368 KDERLWSALLGACRIHSKMELAEKAANSLLELQPQN--PGHYVLLSNIYAKA 417


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/675 (37%), Positives = 383/675 (56%), Gaps = 34/675 (5%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM- 230
           +L     +++  A+ G + +  ++F  +P+RD VS+N ++AGF++ G    A      + 
Sbjct: 76  NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 231 -HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
             E G R   IT+  ++   + +G   +G+ VH   +R GF +     + LVDMYAK G 
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195

Query: 290 VETARLVFDGMKSRNVV-------------------------------SWNSMIAAYVEG 318
           +  AR VFD M+ +NVV                               +W +M+    + 
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G   EA+ +F++M  +GV     T    L AC  L  LE G  +H  + +     +V + 
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++L+ MYSKC+ V  A  +F ++  K ++SW AMI+GY QNG   EA+  F +M+   IK
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD FT+ SVI + A L+ +      H L + S     V V  AL+ +Y KCG++  A  L
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M+     +W  ++ GY   G  K  ++LF KML    KP+ +TF+  +SACS SGLV
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           ++G  YF S+++D+ I P+ DHY  M+DL  R+G L +A +FI++MP  P    +  +L 
Sbjct: 496 DKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC++  ++E+G+ AA  L +LDP     +VLL +++A+   W+ +AK+R  M  + ++K 
Sbjct: 556 ACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKE 615

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PGCS ++ KN+VH F +    HP S+ IY  L+ L  ++   GY PD +S+ HDV D  +
Sbjct: 616 PGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEK 675

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
            ++LS HSEKLAIAFGL+   P   I I KNLRVC DCHNATK+IS +TGR+I+VRD  R
Sbjct: 676 VHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 735

Query: 798 FHCFKNGVCSCGDYW 812
           FH F NG+CSCGD+W
Sbjct: 736 FHKFSNGICSCGDFW 750



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 246/512 (48%), Gaps = 40/512 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
           L+S   +   + D  R+F  +P +    Y+ +L G+++  +   A    + +  D+  V 
Sbjct: 83  LLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVR 142

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P     + ++ V   +G+   G+++H Q++  GF    F  + +V+MYAK G I +A ++
Sbjct: 143 PSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRV 202

Query: 196 FDRM-------------------------------PERDLVSWNTIVAGFAQNGFAELAL 224
           FD M                                ERD ++W T+V G  QNG    AL
Sbjct: 203 FDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEAL 262

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D+  RM  EG   D  T  SIL A   + +L  GK +H Y  R  ++  V V +ALVDMY
Sbjct: 263 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMY 322

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KC  V  A  VF  M  +N++SW +MI  Y + G  EEA+R+F +M   G++P + T+ 
Sbjct: 323 SKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLG 382

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             + +CA+L  LE G   H L     L   V+++N+L+++Y KC  ++ A  +F ++   
Sbjct: 383 SVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH 442

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WI 463
             VSW A+++GYAQ G+  E ++ F KM SK +KPD  T + V+ A +   ++   + + 
Sbjct: 443 DQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYF 502

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHG- 521
           H++             T +ID+Y++ G +  A      M        W  ++      G 
Sbjct: 503 HSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562

Query: 522 --LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
             +GK A E   K+   P  P     LC++ A
Sbjct: 563 MEIGKWAAENLLKL--DPQNPASYVLLCSMHA 592



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 205/441 (46%), Gaps = 71/441 (16%)

Query: 260 AVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           AVH   +R     S   +   L+  YA  G +  AR VFD M  RN+V+ NS+++A    
Sbjct: 31  AVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARA 90

Query: 319 GNPEEAMRIFQKMLDQ---------------------------------GVEPTNVTIME 345
           G   +  R+F  +  +                                 GV P+ +T+  
Sbjct: 91  GLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSG 150

Query: 346 ALHACADLGDLERGIFVH--------------------------------KLLDQLKLGT 373
            +   + LGD   G  VH                                ++ D+++ G 
Sbjct: 151 VVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEME-GK 209

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +V M N++I+   +CK V  A  +F  ++ +  ++W  M+ G  QNG  +EAL+ F +MR
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           ++ +  D +T  S++ A   L+ +   K IHA + R+C+E NVFV +AL+DMY+KC +V 
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A A+F  M  +++ +W  MI GYG +G G+ AV +F++M     KP+D T    IS+C+
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           +   +EEG   F  L    G+ P +    A+V L G+ G + +A     +M     ++  
Sbjct: 390 NLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 448

Query: 614 GAMLGACKIHK---NVELGEK 631
             ++G  +  K    ++L EK
Sbjct: 449 ALVMGYAQFGKAKETIDLFEK 469



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 156/318 (49%), Gaps = 11/318 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E ++I   I ++   D     + LV ++ K  S+  A  VF  +  K    +  M+ 
Sbjct: 292 ALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIV 351

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY +    ++AV     M+ D + P  +    ++  C ++  +  G + H   +V+G   
Sbjct: 352 GYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRP 411

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +     +V +Y KCG IE+A+++FD M   D VSW  +V G+AQ G A+  +DL  +M 
Sbjct: 412 YVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCG 288
            +G + D +T + +L A +  G +  G++ + ++M+   D IV +    T ++D+Y++ G
Sbjct: 472 SKGVKPDGVTFIGVLSACSRSGLVDKGRS-YFHSMQQDHD-IVPLDDHYTCMIDLYSRSG 529

Query: 289 RVETARLVFDGM-KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIMEA 346
            ++ A      M +  +   W ++++A    G+ E      + +L    + P +  ++ +
Sbjct: 530 WLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCS 589

Query: 347 LHACA----DLGDLERGI 360
           +HA      D+  L RG+
Sbjct: 590 MHASKGEWNDVAKLRRGM 607


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/739 (35%), Positives = 415/739 (56%), Gaps = 33/739 (4%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           +S + +    S+A RVF+ +P      Y+ M+ GY +    +     L RM +D++ P  
Sbjct: 66  ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFE-----LARMLFDEM-PER 119

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
              ++ + + G V     GK    +L       D+ +   +++ YA+ G +++A ++FDR
Sbjct: 120 DLVSWNVMIKGYVRNRNLGKA--RELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDR 177

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPE++ VSWN +++ + QN   E A  L       G R ++  +         V   +I 
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLF------GSRENWALVSWNCLLGGFVKKKKIV 231

Query: 259 KAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           +A      R  FDS+    V     ++  YA+ G ++ AR +FD     +V +W +M++ 
Sbjct: 232 EA------RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSG 285

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y++    EEA  +F +M ++     N  +   +         ER     +L D +    +
Sbjct: 286 YIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQG-------ERVEMAKELFDVMPC-RN 337

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS  N++I+ Y++C K+  A ++F K+  +  VSW AMI GY+Q+G   EAL  F  M  
Sbjct: 338 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMER 397

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +  + +  +  S +   A++  +   K +H  +++  +E   FV  AL+ MY KCG++  
Sbjct: 398 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 457

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  LF  M  + + +WN MI GY  HG G+ A+  F  M     KP+D T +  +SACSH
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GLV++G  YF ++ +DYG+ P   HY  MVDLLGRAG L EA + ++ MP EP   ++G
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWG 577

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            +LGA ++H N EL E AA+++F ++P+  G +VLL+N+YA++  W  + K+R  M  KG
Sbjct: 578 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 637

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
           ++K PG S +E++N+ H+F  G   HP+   I+ FLE L   +K AGYV  T+ + HDVE
Sbjct: 638 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVE 697

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           +  +E ++  HSE+LA+A+G++  S G  I + KNLRVC DCHNA KY++ VTGR II+R
Sbjct: 698 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILR 757

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFH FK+G CSCGDYW
Sbjct: 758 DNNRFHHFKDGSCSCGDYW 776



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 229/452 (50%), Gaps = 30/452 (6%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA-VSFLIRMRYDDVAP 136
           ++S + +   + DA RVF+ +P+K D  ++ +L  Y + + L++A V F  R   ++ A 
Sbjct: 158 ILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSR---ENWAL 214

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKM 195
           V +N       C   G +++ K +  +   +   + D+ +   ++  YA+ G+I+EA ++
Sbjct: 215 VSWN-------CLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQL 267

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD  P  D+ +W  +V+G+ QN   E A +L  RM E       ++  ++L        +
Sbjct: 268 FDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNE----VSWNAMLAGYVQGERV 323

Query: 256 RIGKAVHGYAMRAGFDSIV--NVST--ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
            + K +        FD +   NVST   ++  YA+CG++  A+ +FD M  R+ VSW +M
Sbjct: 324 EMAKEL--------FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 375

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           IA Y + G+  EA+R+F  M  +G      +   AL  CAD+  LE G  +H  L +   
Sbjct: 376 IAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 435

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            T   + N+L+ MY KC  ++ A D+F ++ GK +VSWN MI GY+++G   EAL +F  
Sbjct: 436 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFES 495

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           M+ + +KPD  TMV+V+ A +   ++ +  ++ H +        N      ++D+  + G
Sbjct: 496 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAG 555

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
            +  A  L  +M  E     W  ++     HG
Sbjct: 556 LLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 39/284 (13%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +VS + +   + +A  +F+ +P++ +  ++ ML GY +   ++ A          DV 
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF------DVM 333

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P     T+   + G                                 YA+CG+I EA  +
Sbjct: 334 PCRNVSTWNTMITG---------------------------------YAQCGKISEAKNL 360

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+MP+RD VSW  ++AG++Q+G +  AL L   M  EG R +  +  S L   A+V +L
Sbjct: 361 FDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVAL 420

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +GK +HG  ++ G+++   V  AL+ MY KCG +E A  +F  M  +++VSWN+MIA Y
Sbjct: 421 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 480

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
              G  EEA+R F+ M  +G++P + T++  L AC+  G +++G
Sbjct: 481 SRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 524



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 49/367 (13%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++  WN  I++Y+  G   EA+R+F++M        N  I   L      G+ E      
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRN----GEFE---LAR 110

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L D++    D+   N +I  Y + + + +A ++F ++  + + SWN ++ GYAQNG V+
Sbjct: 111 MLFDEMP-ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVD 169

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVI--PALAELSVIRYAKWIHALVIRSCF--------- 472
           +A   F +M  KN    +  + + +    L E  V+  ++   ALV  +C          
Sbjct: 170 DARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKK 229

Query: 473 ------------EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
                        ++V     +I  YA+ G +  AR LFD      V TW  M+ GY  +
Sbjct: 230 IVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQN 289

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD- 579
            + + A ELF++M E     N++++   ++       VE         K+ + + P  + 
Sbjct: 290 RMVEEARELFDRMPE----RNEVSWNAMLAGYVQGERVEMA-------KELFDVMPCRNV 338

Query: 580 -HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
             +  M+    + G+++EA +   KMP    ++    + G  +   + E     A RLF 
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYE-----ALRLFV 393

Query: 639 LDPDEGG 645
           L   EGG
Sbjct: 394 LMEREGG 400



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 53/269 (19%)

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +D+   N  IS Y +  +   A  +F ++   + VS+NAMI GY +NG    A   F +M
Sbjct: 57  SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
                 P                                 E+++     +I  Y +   +
Sbjct: 117 ------P---------------------------------ERDLVSWNVMIKGYVRNRNL 137

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           G AR LF+ M ER V +WN ++ GY  +G    A  +F++M E     ND+++   +SA 
Sbjct: 138 GKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPE----KNDVSWNALLSAY 193

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
             +  +EE    F S ++++ +       G  V    +  ++ EA  F   M +   ++ 
Sbjct: 194 VQNSKLEEACVLFGS-RENWALVSWNCLLGGFV----KKKKIVEARQFFDSMKVRDVVSW 248

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDP 641
              + G     +N E+ E  A +LF+  P
Sbjct: 249 NTIITGYA---QNGEIDE--ARQLFDESP 272



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 18/246 (7%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+ R   +  L  C  +  L   +++   ++K G          L+ ++CK  S+ +A  
Sbjct: 401 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 460

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ +  K    ++TM+ GY++    ++A+ F   M+ + + P       +L  C   G 
Sbjct: 461 LFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520

Query: 154 IRRGKE-IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
           + +G++  H      G   +      +V++  + G +EEA+ +   MP E D   W T++
Sbjct: 521 VDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580

Query: 212 AGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSILPAV---ANVGSLRIG------K 259
                +G    AE A D +  M  E   G ++ + ++  +     +VG LR+       K
Sbjct: 581 GASRVHGNTELAETAADKIFAMEPEN-SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 639

Query: 260 AVHGYA 265
            V GY+
Sbjct: 640 KVPGYS 645


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 415/744 (55%), Gaps = 37/744 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           TK +S   +      A  VF+ +P +    Y+ M+ GY + A    A     +M + D+ 
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL- 95

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYK 194
              +++  +L      G  R  +    +++ +     D+ +   +++ Y + G ++EA  
Sbjct: 96  ---FSWNLML-----TGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARD 147

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FDRMP ++ +SWN ++A + ++G  E A     R+ E     + I+   ++        
Sbjct: 148 VFDRMPHKNSISWNGLLAAYVRSGRLEEA----RRLFESKSDWELISCNCLMGGYVKRNM 203

Query: 255 LRIGKAVHGYAMRAGFDSI-----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           L  G A      R  FD I     ++ +T ++  YA+ G +  AR +F+    R+V +W 
Sbjct: 204 L--GDA------RQLFDQIPVRDLISWNT-MISGYAQDGDLSQARRLFEESPVRDVFTWT 254

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M+ AYV+ G  +EA R+F +M  +     NV I       A     +R     +L +++
Sbjct: 255 AMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMI-------AGYAQYKRMDMGRELFEEM 307

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               ++   N +IS Y +   + +A ++F  +  +  VSW A+I GYAQNG   EA+N  
Sbjct: 308 PF-PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNML 366

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M+      +  T    + A A+++ +   K +H  V+R+ +EK   V  AL+ MY KC
Sbjct: 367 VEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKC 426

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A  +F  +  + + +WN M+ GY  HG G+ A+ +F  M+    KP++IT +  +
Sbjct: 427 GCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVL 486

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           SACSH+GL + G  YF S+ KDYGI P   HY  M+DLLGRAG L EA + I+ MP EP 
Sbjct: 487 SACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPD 546

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              +GA+LGA +IH N+ELGE+AA  +F+++P   G +VLL+N+YAA+  W  ++K+R  
Sbjct: 547 AATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLK 606

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M + G+QKTPG S VE++N++H+F  G   HP+  RIY FLE L  ++K  GYV  T  +
Sbjct: 607 MRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLV 666

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
            HDVE+  ++++L  HSEKLA+AFG+L    G  I + KNLRVC DCHNA K+IS + GR
Sbjct: 667 LHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGR 726

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
            IIVRD HR+H F  G+CSC DYW
Sbjct: 727 LIIVRDSHRYHHFSEGICSCRDYW 750



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 9/210 (4%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C  +  L   +++   ++++G     L    LV ++CK   + +A  VF+ +  K  
Sbjct: 385 LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDI 444

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE-IHG 162
             ++TML GYA+      A++    M    V P       +L  C   G   RG E  H 
Sbjct: 445 VSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHS 504

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAE 221
                G + +      ++++  + G +EEA  +   MP E D  +W  ++     +G  E
Sbjct: 505 MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNME 564

Query: 222 L---ALDLVTRMHEEGRRGDFITIVSILPA 248
           L   A ++V +M E    G ++ + ++  A
Sbjct: 565 LGEQAAEMVFKM-EPHNSGMYVLLSNLYAA 593


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/556 (42%), Positives = 344/556 (61%), Gaps = 2/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH + +++ F   + +   L++MYAKCG +E AR VF+ M  R+ V+W ++I+ Y +
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
              P +A+  F +ML  G  P   T+   + A A       G  +H    +    ++V +
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            ++L+ +Y++   +D A  +F  L+ +  VSWNA+I G+A+     +AL  F  M     
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P  F+  S+  A +    +   KW+HA +I+S  +   F    L+DMYAK G++  AR 
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD + +R V +WN ++  Y  HG GK AV  F +M     +PN+I+FL  ++ACSHSGL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           ++EG HY+  +KKD GI P   HY  +VDLLGRAG LN A  FI++MPIEP   ++ A+L
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC++HKN ELG  AA  +FELDPD+ G HV+L NIYA+   W+  A+VR  M++ G++K
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYV 736
            P CS VE++N +H F +   +HPQ + I    E ++ +IK  GYVPDT+  I  V+   
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E  L  HSEK+A+AF LLN+ PGSTIHI+KN+RVCGDCH A K  S V GREIIVRD +
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH FK+G CSC DYW
Sbjct: 618 RFHHFKDGNCSCKDYW 633



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 213/392 (54%), Gaps = 4/392 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LLK C     + +G+ +H  ++ + F  D+     ++NMYAKCG +EEA K+F++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +RD V+W T+++G++Q+     AL    +M   G   +  T+ S++ A A       G  
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG+ ++ GFDS V+V +AL+D+Y + G ++ A+LVFD ++SRN VSWN++IA +     
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+A+ +FQ ML  G  P++ +      AC+  G LE+G +VH  + +          N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K   +  A  IF +L  + +VSWN+++  YAQ+G   EA+ +F +MR   I+P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALF 499
             + +SV+ A +   ++      + L+ +       +    ++D+  + G +  A R + 
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422

Query: 500 DMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           +M  E     W  +++    H    LG  A E
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 199/395 (50%), Gaps = 24/395 (6%)

Query: 32  AYIPS--RIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQT----------KLV 79
           +YIP+  R Y      LL+ CT  K       L+I+  +   H+ Q+           L+
Sbjct: 54  SYIPADRRFYN----TLLKKCTVFK-------LLIQGRIVHAHILQSIFRHDIVMGNTLL 102

Query: 80  SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
           +++ K  SL +A +VFE +P +    + T++ GY++     DA+ F  +M     +P  +
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
             + ++K          G ++HG  +  GF  ++   + ++++Y + G +++A  +FD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             R+ VSWN ++AG A+    E AL+L   M  +G R    +  S+  A ++ G L  GK
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH Y +++G   +      L+DMYAK G +  AR +FD +  R+VVSWNS++ AY + G
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             +EA+  F++M   G+ P  ++ +  L AC+  G L+ G   ++L+ +  +  +     
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402

Query: 380 SLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
           +++ +  +   ++RA     ++    T   W A++
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 39/312 (12%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+ +Y  + DA  VF+ +  + D  ++ ++ G+A+ +  + A+     M  D   
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  ++Y  L   C   G + +GK +H  +I +G  L  FA   +++MYAK G I +A K+
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDR+ +RD+VSWN+++  +AQ+GF + A+     M   G R + I+ +S+L A ++ G L
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
             G   +    + G          +VD+  + G +  A    + M      + W +++ A
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439

Query: 315 ----------------------------------YVEGGNPEEAMRIFQKMLDQGV--EP 338
                                             Y  GG   +A R+ +KM + GV  EP
Sbjct: 440 CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499

Query: 339 --TNVTIMEALH 348
             + V I  A+H
Sbjct: 500 ACSWVEIENAIH 511


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/677 (38%), Positives = 393/677 (58%), Gaps = 12/677 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLD----LFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           LLK       +R G+ +H +++    +LD     F    ++NMY+K    E A  +    
Sbjct: 12  LLKNAISASSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P R++VSW ++++G AQNG    AL     M  EG   +  T      AVA++     GK
Sbjct: 69  PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  A++ G    V V  +  DMY K    + AR +FD +  RN+ +WN+ I+  V  G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
            P EA+  F +       P ++T    L+AC+D   L  G+ +H L+ +    TDVS+ N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
            LI  Y KCK++  +  IF+++  K  VSW +++  Y QN    +A   + + R   ++ 
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             F + SV+ A A ++ +   + IHA  +++C E+ +FV +AL+DMY KCG +  +   F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE---GPTKPNDITFLCAISACSHSG 556
           D M E+++ T N +I GY   G    A+ LF +M     GPT PN +TF+  +SACS +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT-PNYMTFVSLLSACSRAG 427

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            VE G+  F S++  YGIEP  +HY  +VD+LGRAG +  A++FI+KMPI+P I+V+GA+
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
             AC++H   +LG  AA  LF+LDP + G HVLL+N +AAA  W +   VR  ++  G++
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDY 735
           K  G S + +KN+VH+F +    H  +K I T L  L +E++AAGY PD   S++D+E+ 
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEE 607

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +   +S HSEKLA+AFGLL+      I I KNLR+CGDCH+  K++S    REIIVRD 
Sbjct: 608 EKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDN 667

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH FK+G+CSC DYW
Sbjct: 668 NRFHRFKDGICSCKDYW 684



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 13/298 (4%)

Query: 37  RIYRHPSAL----LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           RI  HP+++     L  C+    L    ++  L+++SG          L+  + K   + 
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
            +  +F  +  K    + +++  Y +    + A    +R R D V    +  + +L  C 
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            +  +  G+ IH   +       +F  + +V+MY KCG IE++ + FD MPE++LV+ N+
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381

Query: 210 IVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           ++ G+A  G  ++AL L   M     G   +++T VS+L A +  G++  G  +   +MR
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMR 440

Query: 268 A--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
           +  G +      + +VDM  + G VE A      M  +  +S W ++  A    G P+
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/707 (36%), Positives = 405/707 (57%), Gaps = 10/707 (1%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           T+L    +   +  A+  L + +  D+   V     +++ C  +G +  G+ IH  +   
Sbjct: 8   TLLSKRQQLGQIAAAIDALQKRKDADLKECVR----VIQSCARLGALAEGRRIHQLIRRV 63

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           G   D++    +V MY KCG +EEA  +F+  P +++ SW  ++   AQ+G ++ AL L 
Sbjct: 64  GLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALF 123

Query: 228 TRMHEEGRRGDFITIVSILPAV-ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             M ++G +   ++  + + A  A    L  G+A+H    R GF   V  +T+LV MY+K
Sbjct: 124 YEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSK 183

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG +E +   F+ M   N VSWN+MIAA+ E     EA+R  QKM  +G+   +VT +  
Sbjct: 184 CGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITL 243

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           + A      L+   ++H  +  L+ G D  + N +++MY KC  +  A  +F  +    +
Sbjct: 244 MSAYDQPSQLKSARYIHDCI--LRTGFDQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDV 301

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           ++WN MI  Y+Q+G  +EAL ++  M+ + + PD +T VSVI A A L  +   K +H  
Sbjct: 302 IAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRR 361

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +    F+       +L++MY KCG +  AR++FD   +  VT WN MI  Y  H   + A
Sbjct: 362 LGDRAFQVTELA-NSLVNMYGKCGILDVARSIFDKTAKGSVT-WNAMIGAYAQHSHEQQA 419

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            ELF  M     +P+ ITF+  +SAC+++GL EE   YF  +++D+G+ P   HYG MV+
Sbjct: 420 FELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVE 479

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
            LG+AGRL++A   IQ MP EP +  + + L  C+ H +++ G+ AA     +DP+    
Sbjct: 480 SLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTG 539

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +V LA I+A A  + + +++R +M  +G++K  G S+++L   V+ F +G   +P+SK I
Sbjct: 540 YVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEI 599

Query: 707 YTFLETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           +  L+ L  E+K AGY PD T+  HDVE   +E LL +HSE+LAIAFG++++S G+ + I
Sbjct: 600 FDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRI 659

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVCGDCH  TK  S +T REIIVRD +RFH FKNG CSC D+W
Sbjct: 660 MKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/479 (32%), Positives = 241/479 (50%), Gaps = 19/479 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E RRI  LI + GL         LV ++ K  SL +A  VFE  P K    +  ++ 
Sbjct: 49  ALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILIT 108

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLIVNGFS 170
             A+     +A++    M    + P   ++T  +  C    E +  G+ +H  L   GF 
Sbjct: 109 VCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQ 168

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             + A T +V+MY+KCG +EE+ K F+ M E + VSWN ++A FA++     AL  + +M
Sbjct: 169 DAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKM 228

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNVSTALVDMYAKCGR 289
             EG R   +T ++++ A      L+  + +H   +R GFD  +VNV   +++MY KCG 
Sbjct: 229 FLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNV---ILNMYGKCGC 285

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ A  +F  M   +V++WN+MIAAY + G+  EA+R ++ M ++GV P + T +  + A
Sbjct: 286 LQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDA 345

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA LGD+E G  VH+ L          + NSL++MY KC  +D A  IF K   K  V+W
Sbjct: 346 CATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSIFDK-TAKGSVTW 403

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           NAMI  YAQ+    +A   F  MR    +P   T +SV+ A A   +   A   H+  + 
Sbjct: 404 NAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEA---HSYFV- 459

Query: 470 SCFEKNVFVMTA------LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
            C +++  V         +++   K G +  A AL   M  E  V TW   +    +HG
Sbjct: 460 -CMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 236/455 (51%), Gaps = 18/455 (3%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           +T+++   Q G    A+D + +  +     D    V ++ + A +G+L  G+ +H    R
Sbjct: 7   STLLSKRQQLGQIAAAIDALQKRKD----ADLKECVRVIQSCARLGALAEGRRIHQLIRR 62

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G  S V VS  LV MY KCG +E ARLVF+   ++NV SW  +I    + G  +EA+ +
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGD-LERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           F +ML QG++P +V+   A++AC+   + L  G  +H LL +      V  T SL+SMYS
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  ++ +   F  +     VSWNAMI  +A++ R  EAL    KM  + I+  S T ++
Sbjct: 183 KCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYIT 242

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           ++ A  + S ++ A++IH  ++R+ F+++  V+  +++MY KCG +  A A+F  M++  
Sbjct: 243 LMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPD 300

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           V  WN MI  Y  HG    A+  +  M E    P+D T++  I AC+  G +E G     
Sbjct: 301 VIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHR 360

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
            L  D   + V +   ++V++ G+ G L+ A     K     G   + AM+GA   H + 
Sbjct: 361 RL-GDRAFQ-VTELANSLVNMYGKCGILDVARSIFDKTA--KGSVTWNAMIGAYAQHSH- 415

Query: 627 ELGEKAANRLF---ELDPDEGGYHVLLANIYAAAS 658
              E+ A  LF    LD +E  Y   ++ + A A+
Sbjct: 416 ---EQQAFELFLLMRLDGEEPSYITFMSVLSACAN 447



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 32/345 (9%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           + LK  R I   I+++G  DQ +    +++++ K   L DA  +F+ +       ++TM+
Sbjct: 251 SQLKSARYIHDCILRTGF-DQDVVNV-ILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMI 308

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             Y++     +A+ F   M+ + V P  Y Y  ++  C  +G++  GK++H +L    F 
Sbjct: 309 AAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQ 368

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
           +   A   +VNMY KCG ++ A  +FD+   +  V+WN ++  +AQ+   + A +L   M
Sbjct: 369 VTELA-NSLVNMYGKCGILDVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLM 426

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA----LVDMYAK 286
             +G    +IT +S+L A AN G   + +  H Y +    D  V         +V+   K
Sbjct: 427 RLDGEEPSYITFMSVLSACANAG---LPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGK 483

Query: 287 CGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG---VEPTNVT 342
            GR+  A  +  GM    +V++W S +A     G+ +       K   +G   ++P   T
Sbjct: 484 AGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRG-----KFAAKGAIRIDPEAST 538

Query: 343 IMEALHAC-ADLGDLERGIFVHKL-LDQ----------LKLGTDV 375
              AL    AD GD +    + KL LD+          +KLGT V
Sbjct: 539 GYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSV 583


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/569 (42%), Positives = 355/569 (62%), Gaps = 2/569 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S++ A A   SL   +A+H +   + F   V +  +L+ +Y KCG V  AR VFDGM +R
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++ SW S+IA Y +   P+EA+ +   ML    +P   T    L A         G  +H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C ++D A  +F +L+ K  VSWNA+I G+A+ G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
             L  F +M+    +   FT  SV  A+A +  +   KW+HA +I+S    + FV   ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +FD ++++ V TWN M+  +  +GLG+ AV  F +M +     N I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFL  ++ACSH GLV+EG  YF  + K+Y +EP +DHY  +VDLLGRAG LN+A  FI K
Sbjct: 369 TFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP++P   V+GA+LG+C++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   WD  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE++N VH F +    HP+S+ IY   E +  +I+ AGYV
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P+T+ +   V++  ++  L  HSEK+A+AF L+N   G+TI I KN+R+CGDCH+A +YI
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYI 607

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           S V  REI+VRD +RFH F +G CSCGDY
Sbjct: 608 SKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 199/377 (52%), Gaps = 5/377 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  L+  C     +   + IH  L  + F+  +F    ++++Y KCG + +A ++FD MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD+ SW +++AG+AQN   + AL L+  M     + +  T  S+L A     S  IG+ 
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   ++  +   V V +AL+DMYA+CGR++ A  VFD ++S+N VSWN++IA +   G+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS--MT 378
            E  + +F +M   G E T+ T      A A +G LE+G +VH  +  +K G  +S  + 
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAFVG 304

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N+++ MY+K   +  A  +F ++  K +V+WN+M+  +AQ G   EA+ +F +MR   + 
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA- 497
            +  T +S++ A +   +++  K    ++     E  +     ++D+  + G +  A   
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 498 LFDMMNERHVTTWNVMI 514
           +F M  +     W  ++
Sbjct: 425 IFKMPMKPTAAVWGALL 441



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 188/372 (50%), Gaps = 4/372 (1%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C    SL + R I   +  S           L+ L+CK  +++DA RVF+ +P + 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +++ GYA+    D+A+  L  M      P  + +  LLK  G       G++IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +   +  D++  + +++MYA+CG+++ A  +FD++  ++ VSWN ++AGFA+ G  E 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L +   M   G      T  S+  A+A +G+L  GK VH + +++G      V   ++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  AR VFD +  ++VV+WNSM+ A+ + G   EA+  F++M   GV    +T
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L AC+  G ++ G     ++ +  L  ++    +++ +  +   ++ A     K+ 
Sbjct: 370 FLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429

Query: 403 GK-TLVSWNAMI 413
            K T   W A++
Sbjct: 430 MKPTAAVWGALL 441


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/745 (34%), Positives = 419/745 (56%), Gaps = 16/745 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++   +S  DA   F+ +  +    +  ++  +A      + +  L RMR D V P    
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +   L  CGD   +R G  IH  ++ +   +D      ++NMY KCG +  A ++F +M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 201 E-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             R+++SW+ +    A +G    AL     M   G +     +V+IL A ++   ++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVE 317
            +H     +GF+S + V+ A++ MY +CG VE AR VFD M    R+VVSWN M++ YV 
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               ++A++++Q+M    + P  VT +  L AC+   D+  G  +HK +   +L  +V +
Sbjct: 241 NDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM----- 432
            N+L+SMY+KC     A  +F K++ ++++SW  +I  Y +   V EA + F +M     
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 433 --RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
              S+ +KPD+   V+++ A A++S +   K +           +  V TA++++Y KCG
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 417

Query: 491 AVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
            +  AR +FD +  R  V  WN MI  Y   G    A++LF +M     +P+  +F+  +
Sbjct: 418 EIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 477

Query: 550 SACSHSGLVEEGIHYFTSLKKDY-GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
            ACSH+GL ++G  YFTS+  +Y  +   + H+G + DLLGR GRL EA +F++K+P++P
Sbjct: 478 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 537

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
               + ++L AC+ H++++  ++ AN+L  L+P     +V L+NIYA    W  +AKVR 
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRK 597

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
            M ++G++K  G S +E+   +H F +G   HP+++ I   L  L  ++K  GYVPDT  
Sbjct: 598 FMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKM 657

Query: 729 I-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
           + H V++  +E LL SHSE+LAIA GL+++  G+ + + KNLRVC DCH ATK IS + G
Sbjct: 658 VLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAG 717

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           R+I+VRD  RFH FK+G CSC DYW
Sbjct: 718 RKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 252/512 (49%), Gaps = 46/512 (8%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL++  RI  +++ S L         L++++ K  SLS A RVF  +    + +  +++ 
Sbjct: 73  SLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMA 132

Query: 112 G-YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           G +A   ++ +A+     M    +         +L  C     ++ G+ IH  + ++GF 
Sbjct: 133 GAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFE 192

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVT 228
            +L     V+ MY +CG +EEA K+FD M E  RD+VSWN +++ +  N   + A+ L  
Sbjct: 193 SELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQ 252

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           RM     R D +T VS+L A ++   + +G+ +H   +    +  V V  ALV MYAKCG
Sbjct: 253 RMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCG 309

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-------QGVEPTNV 341
               AR VFD M+ R+++SW ++I+AYV      EA  +FQ+ML+       Q V+P  +
Sbjct: 310 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 369

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
             +  L+ACAD+  LE+G  V +      L +D ++  +++++Y KC +++ A  IF  +
Sbjct: 370 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAV 429

Query: 402 QGKTLVS-WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
             +  V  WNAMI  YAQ G+ +EAL  F +M  + ++PDSF+ VS++ A +   +    
Sbjct: 430 CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG 489

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K        S F       T++   Y                  R +  +  + D  G  
Sbjct: 490 K--------SYF-------TSMTTEYRNV--------------TRTIQHFGCVADLLGRG 520

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           G  K A E   K+   P KP+ + +   ++AC
Sbjct: 521 GRLKEAEEFLEKL---PVKPDAVAWTSLLAAC 549


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/690 (38%), Positives = 400/690 (57%), Gaps = 41/690 (5%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE---AYKMFDRMPERDLVSWNTIVAGF 214
           + IH Q+I  G     +A++ ++         +    A  +FD + E +L+ WNT+  G 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           A +     AL L   M   G   D  T   +L + A     + G+ +HG+ ++ GFD  +
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 275 NVSTALVDMYAKCGRVETARLVFD---------------GMKSR---------------- 303
            V T+L+ MYA+ GR+E AR VFD               G  SR                
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFV 362
           +VVSWN+MI+ YVE GN +EA+ +F++M+    V P   T++  + ACA    +E G  V
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  ++     +++ + N+LI +YSK  +V+ A ++F  L  K ++SWN +I GY      
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV---IRSCFEKNVFVM 479
            EAL  F +M      P+  TM+S++PA A L  I   +WIH  +   ++        + 
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 480 TALIDMYAKCGAVGTARALFDM-MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
           T+LIDMYAKCG +  A+ +FD  M+ R ++TWN MI G+  HG   AA ++F++M     
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P+DITF+  +SACSHSG+++ G + F S+ + Y I P ++HYG M+DLLG +G   EA 
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           + I  MP+EP   ++ ++L ACKIH N+ELGE  A +L +++P   G +VLL+NIYAAA 
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544

Query: 659 MWDKLAKVRTIMEKKGL-QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
            W+++AK+R ++  KG+ +K PGCS +E+ + VH F  G   HPQ++ IY  LE +   +
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLL 604

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           + AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I KNLRVC +CH
Sbjct: 605 EEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCH 664

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVC 806
            ATK IS +  REII RD  RF  F++GVC
Sbjct: 665 EATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 176/582 (30%), Positives = 292/582 (50%), Gaps = 78/582 (13%)

Query: 56  LRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +R I   +IK+GL + +   +KL+  FC     ++    A  VF+ I +    +++TM +
Sbjct: 4   VRXIHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFR 62

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G+A  +    A+   + M    + P  Y + +LLK C      + G++IHG ++  GF L
Sbjct: 63  GHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDL 122

Query: 172 DLFAMTGVVNMYAKCGQ-------------------------------IEEAYKMFDRMP 200
           D++  T +++MYA+ G+                               IE A K+FD +P
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGK 259
            +D+VSWN +++G+ + G  + AL+L   M      R D  T+V+++ A A   S+ +G+
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH +    GF S + +  AL+D+Y+K G VETA  +FDG+ +++V+SWN++I  Y    
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDV-S 376
             +EA+ +FQ+ML  G  P +VT++  L ACA LG ++ G ++H  +++   G  T+V S
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362

Query: 377 MTNSLISMYSKCKKVDRAADIF-SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           +  SLI MY+KC  +D A  +F S +  ++L +WNAMI G+A +GR N A + F +MR  
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I+PD  T V ++ A +   ++   + I   + R       + +T  ++ Y         
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG------YEITPKLEHYG-------- 468

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
                            MID  G  GL K A E+ N M   P +P+ + +   + AC   
Sbjct: 469 ----------------CMIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIH 509

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           G +E G  +   L K   IEP     Y  + ++   AGR NE
Sbjct: 510 GNLELGESFAKKLIK---IEPGNSGSYVLLSNIYAAAGRWNE 548


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/674 (36%), Positives = 386/674 (57%), Gaps = 33/674 (4%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +LF+   ++++Y+K G + +  ++F+ MP RD VSWN  ++G+A  G    A+ +   M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 232 EEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK---- 286
           ++     + IT  ++L   +    + +G+ ++G  ++ GF S V V + LVDMY K    
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 287 ---------------------------CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
                                      CG +E ++ +F G+K R+ +SW  MI   ++ G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              EA+ +F++M   G      T    L AC  L  L  G  +H  + +     +V + +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ MYSKC+ +  A  +F ++  K ++SW AM++GY QNG   EA+  F +M+   ++P
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D FT+ SVI + A L+ +      H   + S     + V  ALI +Y KCG+   +  LF
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLF 429

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             MN R   +W  ++ GY   G     + LF +ML    KP+ +TF+  +SACS +GLVE
Sbjct: 430 TEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVE 489

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           +G+ YF S+ K++GI P++DH   ++DLLGRAGRL EA +FI  MP  P +  +  +L +
Sbjct: 490 KGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSS 549

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C++H ++E+G+ AA+ L  L+P     +VLL+++YA+   WDK+A++R  M  K ++K P
Sbjct: 550 CRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEP 609

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           G S ++ K +VH F +     P   +IY  LE L  ++   GYVPD +S+ HDVE+  + 
Sbjct: 610 GYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKI 669

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +L+ HSEKLAIAFGL+   PG  I + KNLRVCGDCHNATK+IS +T REI+VRD  RF
Sbjct: 670 KMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRF 729

Query: 799 HCFKNGVCSCGDYW 812
           H FK+G CSCGD+W
Sbjct: 730 HLFKDGTCSCGDFW 743



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 250/512 (48%), Gaps = 41/512 (8%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S++ K   LS   ++F  +P +    ++  + GYA + S  DAV  + ++   D A  
Sbjct: 77  ILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR-VYKLMLKDAAMN 135

Query: 138 VYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           +   T+  +L +C     +  G++I+GQ++  GF  D+F  + +V+MY K G I +A + 
Sbjct: 136 LNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRY 195

Query: 196 FDRMP-------------------------------ERDLVSWNTIVAGFAQNGFAELAL 224
           FD MP                               ERD +SW  ++ G  QNG    AL
Sbjct: 196 FDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREAL 255

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           D+   M   G   D  T  S+L A  ++ +L  GK +H Y +R      V V +ALVDMY
Sbjct: 256 DMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMY 315

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KC  +++A  VF  M  +NV+SW +M+  Y + G  EEA++IF +M   GVEP + T+ 
Sbjct: 316 SKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLG 375

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             + +CA+L  LE G   H       L + ++++N+LI++Y KC   + +  +F+++  +
Sbjct: 376 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR 435

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWI 463
             VSW A++ GYAQ G+ NE +  F +M +  +KPD  T + V+ A +   ++    ++ 
Sbjct: 436 DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYF 495

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG- 521
            +++        V   T +ID+  + G +  AR   + M     V  W  ++     HG 
Sbjct: 496 ESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGD 555

Query: 522 --LGKAAVELFNKMLEGPTKPNDITFLCAISA 551
             +GK A +    +   P  P     L ++ A
Sbjct: 556 MEIGKWAADSLIAL--EPQNPASYVLLSSLYA 585



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 33/390 (8%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R+I   I+K G        + LV ++ K   + DA R F+ +P++   + +TM+ G  + 
Sbjct: 158 RQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRC 217

Query: 117 ASLD------------DAVSFLI-------------------RMRYDDVAPVVYNYTYLL 145
             ++            D++S+ I                    MR    A   + +  +L
Sbjct: 218 GMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVL 277

Query: 146 KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV 205
             CG +  +  GK+IH  +I      ++F  + +V+MY+KC  I+ A  +F RMP+++++
Sbjct: 278 TACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVI 337

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SW  ++ G+ QNGF+E A+ +   M   G   D  T+ S++ + AN+ SL  G   H  A
Sbjct: 338 SWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRA 397

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           + +G  S + VS AL+ +Y KCG  E +  +F  M  R+ VSW +++A Y + G   E +
Sbjct: 398 LVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETI 457

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISM 384
            +F++ML  G++P  VT +  L AC+  G +E+G+ +   ++ +  +   V     +I +
Sbjct: 458 GLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDL 517

Query: 385 YSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
             +  +++ A +  + +     +V W  ++
Sbjct: 518 LGRAGRLEEARNFINNMPCHPDVVGWATLL 547



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 5/282 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C SL  L   ++I   +I++   D     + LV ++ K  S+  A  VF+ +P K 
Sbjct: 276 VLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKN 335

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ML GY +    ++AV     M+ + V P  +    ++  C ++  +  G + H 
Sbjct: 336 VISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           + +V+G    +     ++ +Y KCG  E ++++F  M  RD VSW  ++AG+AQ G A  
Sbjct: 396 RALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANE 455

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
            + L  RM   G + D +T + +L A +  G +  G +         G   IV+  T ++
Sbjct: 456 TIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCII 515

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPE 322
           D+  + GR+E AR   + M    +VV W +++++    G+ E
Sbjct: 516 DLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
           AK +H L++++  +   F+   LI  Y K G +  A  +FD + + ++ +WN ++  Y  
Sbjct: 24  AKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSK 83

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            GL     ++FN M   P + + +++  AIS  ++ G   + +  +  + KD
Sbjct: 84  LGLLSQMQQIFNLM---PFR-DGVSWNLAISGYANYGSCSDAVRVYKLMLKD 131


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/570 (42%), Positives = 358/570 (62%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L +     ++  GK +H    + G      ++T LV++Y  C  +  A L+FD +  R
Sbjct: 6   SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N+  WN MI  Y   G  E A+ ++ +M D G+ P   T    L AC+ L  +E G  +H
Sbjct: 66  NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           K + +  L +DV +  +LI MY+KC  V+ A  +F K+  + +V WN+M+  Y+QNG+ +
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           E+L     M    +KP   T V  I A A+  ++   K +H    R  FE N  V TAL+
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALM 245

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G+V  AR+LF+++ E+ V +WN MI GY  HG    A++LF +M +G   P+ I
Sbjct: 246 DMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHI 304

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+  ++ACSH GL+ EG  +F S+  D+ I P + HY  M+DLLG  GRL EA+  I +
Sbjct: 305 TFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIME 364

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M +EP   V+GA+L +CKIH NVE+GE A  +L EL+PD+GG +V+L+N+YA A  WD +
Sbjct: 365 MRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGV 424

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A++R +M  KGL+K+  CS +E+ N+VH+F S  T HP+S+ IY  L+     +K AGY 
Sbjct: 425 ARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYA 484

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P   S+ HDVED  + +++S HSE+LAIAFGL+++S G+ + I KNLR+C DCH A K+I
Sbjct: 485 PQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFI 544

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S +T REI +RD++R+H FK+GVCSCGD+W
Sbjct: 545 SKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 225/408 (55%), Gaps = 13/408 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL+ C     I  GK++H ++   G S +    T +VN+Y  C  +  A+ +FDR+ 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +R+L  WN ++ G+A NG  ELA+ L  +M + G   D  T   +L A + + ++  GK 
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R+G +S V V  AL+DMYAKCG VE+AR VFD +  R+VV WNSM+A Y + G 
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           P+E++ + + M   G++PT  T + ++ A AD G L +G  +H    +    ++  +  +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K   V+ A  +F  L+ K +VSWNAMI GYA +G  NEAL+ F +M+ K + PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKCGAVGTA-RA 497
             T V V+ A +   ++   K +H   + S F     V   T +ID+   CG +  A + 
Sbjct: 303 HITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 498 LFDMMNERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPND 542
           + +M  E     W  ++     HG   +G+ A+E   K++E   +P+D
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALE---KLVE--LEPDD 404



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 212/384 (55%), Gaps = 6/384 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL+ C   K +   +++   I + G+    L  TKLV+L+C  NSL++A  +F+ I  
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +   L++ M++GYA     + A+S   +MR   + P  + + ++LK C  +  +  GK+I
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  +I +G   D+F    +++MYAKCG +E A ++FD++ ERD+V WN+++A ++QNG  
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + +L L   M   G +    T V  + A A+ G L  GK +HGY+ R GF+S   V TAL
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAK G V  AR +F+ ++ + VVSWN+MI  Y   G+  EA+ +F++M  + V P +
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDH 303

Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +T +  L AC+  G L  G +    ++    +   V     +I +   C +++ A  +  
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363

Query: 400 KLQGKTLVS-WNAMILGYAQNGRV 422
           +++ +     W A++     +G V
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHGNV 387


>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/717 (37%), Positives = 402/717 (56%), Gaps = 51/717 (7%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
            L +   V  + +  + H Q+I+NG   DL  +T + +  +    I++A  +F  +P  D
Sbjct: 13  FLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVH 262
           L  +N ++  F+ N     A+ L T + +      D  T   +   ++   SL +G  +H
Sbjct: 73  LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFV---ISGASSLGLGLLLH 129

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            +++ AGF S + V +A+V  Y K  RV  AR VFDGM  R+ V WN+M++  V+    +
Sbjct: 130 AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ IF  M+  G+   + T+   L   A+L DL  G+ +  L  ++   +   +   L 
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            +YSKC +++ A  +F ++    LVS+NAMI GY  N     ++  F ++     K +S 
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++V +IP       +   + IH    +S    N  V TAL  +Y++   + +AR LFD  
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT------------------ 544
           +E+ + +WN MI GY  +GL + A+ LF +M +   +PN +T                  
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429

Query: 545 ----------------------------FLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
                                       FL  + ACSH+GLV EG   F S+  D+G EP
Sbjct: 430 WVHDLINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 489

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
           + +HY  MVDLLGRAG L++A DFI+KMP+EPG  V+GA+LGAC IHK+  L   A+++L
Sbjct: 490 LPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKL 549

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           FELDP   GY+VLL+NIY+A   + + A VR +++++ L KTPGC+L+E+ N +H F SG
Sbjct: 550 FELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSG 609

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQ+  IY  LE L  +++ AG+  +T  ++HDVE+  +E ++  HSEKLAIAFGL+
Sbjct: 610 DQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLI 669

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            S PG+ I I KNLRVC DCHNATK+IS +T R I+VRD +RFH FK+G+CSCGDYW
Sbjct: 670 TSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/744 (34%), Positives = 410/744 (55%), Gaps = 10/744 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++CK      A ++F+ +P +    +++++ GY +     + ++     R  D+   
Sbjct: 60  LLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLD 119

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + ++  L VCG   ++R G+ IH  + V+G    +     +++MY KCG+I+ A  +F+
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE 179

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN--VGSL 255
              E D VSWN+++AG+ + G  +  L L+ +M   G   +   + S L A  +    S+
Sbjct: 180 SADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSI 239

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GK +HG A++ G D  V V TAL+D YAK G +E A  +F  M   NVV +N+MIA +
Sbjct: 240 ECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGF 299

Query: 316 VEGGN-----PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           ++          EAM +F +M  +G++P+  T    L AC+ +   E G  +H  + +  
Sbjct: 300 LQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN 359

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L +D  + N+L+ +YS    ++     F       +VSW ++I+G+ QNG+    L  F 
Sbjct: 360 LQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFH 419

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           ++     KPD FT+  ++ A A L+ ++  + IHA  I++       +  + I MYAKCG
Sbjct: 420 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 479

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            + +A   F       + +W+VMI     HG  K AV+LF  M      PN ITFL  + 
Sbjct: 480 DIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 539

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSH GLVEEG+ YF  +KKD+GI P + H   +VDLLGRAGRL EA  FI     E   
Sbjct: 540 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDP 599

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            ++ ++L AC++HK  + G++ A R+ EL+P+    +VLL NIY  A +     ++R +M
Sbjct: 600 VMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLM 659

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH 730
           + +G++K PG S +E+ N VHSF +G   HP S+ IY  LE +++EIK   Y+ D   + 
Sbjct: 660 KDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVS 718

Query: 731 DVED--YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
           D  +  +   +++S HSEKLA+ FG+++    + + + KNLR C  CH   K  S +  R
Sbjct: 719 DASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENR 778

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           EII+RD  RFH F++G CSCGDYW
Sbjct: 779 EIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 265/530 (50%), Gaps = 21/530 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT L++     G +  GK  H  +I   F   LF +  ++ MY KCG+ + A K+FDRMP
Sbjct: 22  YTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMP 81

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +R++VSWN++++G+ Q GF    ++L         R D  T  + L        LR+G+ 
Sbjct: 82  KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 141

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H     +G    V ++ +L+DMY KCGR++ ARLVF+     + VSWNS+IA YV  G+
Sbjct: 142 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 201

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACAD--LGDLERGIFVHKLLDQLKLGTDVSMT 378
            +E +R+  KML  G+   +  +  AL AC       +E G  +H    +L L  DV + 
Sbjct: 202 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 261

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----NGRVNEALNYFCKMR 433
            +L+  Y+K   ++ A  IF  +    +V +NAMI G+ Q     +   NEA+  F +M+
Sbjct: 262 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 321

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           S+ +KP  FT  S++ A + +      K IHA + +   + + F+  AL+++Y+  G++ 
Sbjct: 322 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 381

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
                F    +  V +W  +I G+  +G  +  + LF+++L    KP++ T    +SAC+
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441

Query: 554 HSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           +   V+ G  IH + ++K   G   ++ +  + + +  + G ++ A +   K    P I 
Sbjct: 442 NLAAVKSGEQIHAY-AIKTGIGNFTIIQN--SQICMYAKCGDIDSA-NMTFKETKNPDIV 497

Query: 612 VFGAMLGACKIHKNVELG-EKAANRLFELDPDEG--GYHVLLANIYAAAS 658
            +  M     I  N + G  K A  LFEL    G    H+    +  A S
Sbjct: 498 SWSVM-----ISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS 542



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 230/487 (47%), Gaps = 14/487 (2%)

Query: 47  LEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L VC    +LR    I  LI  SGL    L    L+ ++CK   +  A  VFE   D+LD
Sbjct: 127 LSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFES-ADELD 185

Query: 104 AL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD--VGEIRRGKEI 160
           ++ +++++ GY +  S D+ +  L++M    +    Y     LK CG      I  GK +
Sbjct: 186 SVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKML 245

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ---- 216
           HG  +  G  LD+   T +++ YAK G +E+A K+F  MP+ ++V +N ++AGF Q    
Sbjct: 246 HGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETM 305

Query: 217 -NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            + FA  A+ L   M   G +    T  SIL A + + +   GK +H    +    S   
Sbjct: 306 ADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEF 365

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +  ALV++Y+  G +E     F      +VVSW S+I  +V+ G  E  + +F ++L  G
Sbjct: 366 IGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSG 425

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            +P   TI   L ACA+L  ++ G  +H    +  +G    + NS I MY+KC  +D A 
Sbjct: 426 RKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSAN 485

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
             F + +   +VSW+ MI   AQ+G   EA++ F  M+   I P+  T + V+ A +   
Sbjct: 486 MTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 545

Query: 456 VIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA-LFDMMNERHVTTWNVM 513
           ++    ++   +        NV     ++D+  + G +  A + + D   E     W  +
Sbjct: 546 LVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 605

Query: 514 IDGYGTH 520
           +     H
Sbjct: 606 LSACRVH 612



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 174/375 (46%), Gaps = 8/375 (2%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D +T   ++      GSL  GK  H + ++  F   + +   L+ MY KCG  + A+ +F
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  RNVVSWNS+I+ Y + G   E M +F++     +     T   AL  C    DL 
Sbjct: 78  DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L+    LG  V +TNSLI MY KC ++D A  +F        VSWN++I GY 
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE--LSVIRYAKWIHALVIRSCFEKN 475
           + G  +E L    KM    +  +S+ + S + A      S I   K +H   ++   + +
Sbjct: 198 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 257

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY-----GTHGLGKAAVELF 530
           V V TAL+D YAK G +  A  +F +M + +V  +N MI G+             A+ LF
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 317

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
            +M     KP++ TF   + ACS     E G      + K Y ++       A+V+L   
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSL 376

Query: 591 AGRLNEAWDFIQKMP 605
           +G + +        P
Sbjct: 377 SGSIEDGLKCFHSTP 391



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 6/288 (2%)

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G+   +VT  + +      G L  G   H  + +      + + N+L+ MY KC + D A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F ++  + +VSWN++I GY Q G  +E +N F + R  +++ D FT  + +      
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +R  + IHAL+  S     V +  +LIDMY KCG +  AR +F+  +E    +WN +I
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC--SHSGLVEEG-IHYFTSLKKD 571
            GY   G     + L  KML      N      A+ AC  + S  +E G + +  ++K  
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
             ++ V+    A++D   + G L +A    + MP +P + ++ AM+  
Sbjct: 254 LDLDVVVG--TALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 9/299 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C++++     ++I   I K  L         LV L+    S+ D  + F   P KL
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KL 393

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + + +++ G+ +    +  ++    + +    P  +  + +L  C ++  ++ G++IH
Sbjct: 394 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIH 453

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              I  G           + MYAKCG I+ A   F      D+VSW+ +++  AQ+G A+
Sbjct: 454 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 513

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTAL 280
            A+DL   M   G   + IT + +L A ++ G +  G +         G    V  S  +
Sbjct: 514 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 573

Query: 281 VDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           VD+  + GR+ E    + D     + V W S+++A       +   R+ +++++  +EP
Sbjct: 574 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIE--LEP 630


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/628 (38%), Positives = 367/628 (58%), Gaps = 22/628 (3%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           W   +   A  G    A+ L  RM      R     ++ + L + A +G   +G ++H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 265 AMRAGFDSIVNVSTALVDMYAK--CGRV-----------------ETARLVFDGMKSRNV 305
           A+R+G  +    + AL+++Y K  C  +                 E+ R VFD M  R+V
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN+++    E G   EA+   +KM  +G  P + T+   L   A+  D++RG+ VH  
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +    +DV + +SLI MY+ C + D +  +F  L  +  + WN+++ G AQNG V EA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F +M    ++P   T  S+IP    L+ +R+ K +HA VI   FE NVF+ ++LIDM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y KCG +  A  +FD M+   V +W  MI GY  HG  + A+ LF +M  G  KPN ITF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  ++ACSH+GLV++G  YF S+   YGI P ++H+ A+ D LGRAG L+EA++FI KM 
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I+P  +V+  +L AC++HKN  L E+ A ++ EL+P   G HV+L+N+Y+A+  W++ A 
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R  M KKG++K P CS +E+K+++H F +    HP   RI   L    +++   G+VP+
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555

Query: 726 TNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
           T  +  D+E+  +  +L  HSEKLAI FG++++  G+ I + KNLRVC DCH  TK+IS 
Sbjct: 556 TEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISK 615

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  REI+VRD +RFH FK+G CSCGD+W
Sbjct: 616 LADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 249/542 (45%), Gaps = 74/542 (13%)

Query: 25  KHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRIL-PLIIKSGLCDQHLFQTKLVSLFC 83
           + + + R+ +P+ +   P+AL       L  L   L  L I+SG          L++L+C
Sbjct: 40  RASAAPRSSVPASL---PAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYC 96

Query: 84  KY-------------------NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K                     +     +VF+ + ++    ++T++ G A+     +A+ 
Sbjct: 97  KVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALG 156

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
           F+ +M  +   P  +  + +L +  +  +++RG E+HG    NGF  D+F  + +++MYA
Sbjct: 157 FVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYA 216

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
            C + + + K+FD +P RD + WN+++AG AQNG  E AL +  RM + G R   +T  S
Sbjct: 217 NCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSS 276

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           ++P   N+ SLR GK +H Y +  GF+  V +S++L+DMY KCG +  A  +FD M S +
Sbjct: 277 LIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPD 336

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVH 363
           VVSW +MI  Y   G   EA+ +F++M     +P ++T +  L AC+  G +++G  +  
Sbjct: 337 VVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFK 396

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILG------- 415
            + +   +   +    +L     +  ++D A +  SK+Q K   S W+ ++         
Sbjct: 397 SMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNT 456

Query: 416 ---------------------------YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
                                      Y+ +GR NEA +    MR K +K D     S I
Sbjct: 457 MLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD--PACSWI 514

Query: 449 PALAELSVI----RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
              ++L V     R   W         +++ +  + A  +  A+ G V     +F  + E
Sbjct: 515 EVKSKLHVFVAHDRSHPW---------YDRIIDALNAFSEQMAREGHVPNTEDVFQDIEE 565

Query: 505 RH 506
            H
Sbjct: 566 EH 567


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/768 (34%), Positives = 408/768 (53%), Gaps = 101/768 (13%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L  C  + + R++  ++     C  +     ++  +     L++A ++F   P +    +
Sbjct: 51  LSKCGRVDDARKLFDVMPDRDECSWN----TMIGAYANSGRLNEARKLFYETPIRSCITW 106

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
            +++ GY ++    +A+     M+Y+   P  + +  +L+VC     + +GK+IH   I 
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIK 166

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALD 225
             F  + F +TG+V+MYAKC  I EA  +F+  P+ R+ V W  +V G++QNG    A++
Sbjct: 167 TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIE 226

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
               M  EG   +  T  SIL A  ++ +   G  VHG  +R+GF + V V +ALVDMY+
Sbjct: 227 CFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYS 286

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG +  AR + + M+  + VSWNSMI   V  G  EEA+ +F+ M              
Sbjct: 287 KCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMH------------- 333

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
                            H  +D+    + V+  N+L+ MY+K    D A D+F K+  K 
Sbjct: 334 ---------------LRHMKIDEFTYPSLVN--NALVDMYAKRGYFDYAFDVFEKMTDKD 376

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           ++SW +++ G   NG   EAL  FC+MR   I PD   + +V+ AL              
Sbjct: 377 VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALD------------- 423

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
                          +L+ MYAKCG +  A  +FD M  + V TW  +I GY  +G G+ 
Sbjct: 424 --------------NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR- 468

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
                                                 YF S+++ YGI+P  +HY  M+
Sbjct: 469 -------------------------------------DYFQSMEEVYGIKPGPEHYACMI 491

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGR+G+L EA + + +M ++P  TV+ A+L AC++H NVELGE+AAN LFEL+P    
Sbjct: 492 DLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAV 551

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +VLL+N+Y+AA  W++ AK R +M+ +G+ K PGCS +E+ ++VH F S    HP++  
Sbjct: 552 PYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAE 611

Query: 706 IYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY+ ++ ++  IK AGYVPD N ++HD+++  +E  L+ HSEKLA+AFGLL   PG+ I 
Sbjct: 612 IYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIR 671

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLR+CGDCH A KY+S V  R +I+RD + FH F+ G CSC DYW
Sbjct: 672 IFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 65/399 (16%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L VC+    L++ ++I    IK+         T LV ++ K   + +A  +FE  PDK 
Sbjct: 144 VLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKR 203

Query: 103 D-ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           +  L+  M+ GY++      A+     MR + +    + +  +L  CG +     G ++H
Sbjct: 204 NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVH 263

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           G ++ +GF  ++F  + +V+MY+KCG +  A +M + M   D VSWN+++ G  + G  E
Sbjct: 264 GCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGE 323

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L   MH    + D  T  S+                              V+ ALV
Sbjct: 324 EALSLFRIMHLRHMKIDEFTYPSL------------------------------VNNALV 353

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAK G  + A  VF+ M  ++V+SW S++   V  G+ EEA+R+F +M   G+ P  +
Sbjct: 354 DMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQI 413

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            I   L A                           + NSL+SMY+KC  ++ A  +F  +
Sbjct: 414 VIAAVLSA---------------------------LDNSLVSMYAKCGCIEDANKVFDSM 446

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKP 439
           + + +++W A+I+GYAQNGR     +YF  M     IKP
Sbjct: 447 EIQDVITWTALIVGYAQNGR---GRDYFQSMEEVYGIKP 482



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 48/366 (13%)

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C  L   E    + + ++        S +N ++S  SKC +VD A  +F  +  +   SW
Sbjct: 16  CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75

Query: 410 NAMILGYAQNGRVNEA-------------------------------LNYFCKMRSKNIK 438
           N MI  YA +GR+NEA                               L  F +M+ +  +
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ FT  SV+   +   ++   K IHA  I++ F+ N FV+T L+DMYAKC  +  A  L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 499 FDMM-NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           F++  ++R+   W  M+ GY  +G G  A+E F  M     + N  TF   ++AC     
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255

Query: 558 VEEGIHYFTSL-KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
              G      + +  +G    +    A+VD+  + G L+ A   ++ M ++  ++ + +M
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVG--SALVDMYSKCGDLSNARRMLETMEVDDPVS-WNSM 312

Query: 617 LGACKIHKNVELGEKAAN-----RLFELDPDEGGYHVLLAN----IYAAASMWDKLAKVR 667
           +  C       LGE+A +      L  +  DE  Y  L+ N    +YA    +D    V 
Sbjct: 313 IVGCVRQG---LGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVF 369

Query: 668 TIMEKK 673
             M  K
Sbjct: 370 EKMTDK 375


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/656 (35%), Positives = 382/656 (58%), Gaps = 1/656 (0%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K+IH  LI +    D F +  ++       Q + +Y +F      ++  +N+++ GF  N
Sbjct: 30  KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                 LDL   + + G      T   +L A     S ++G  +H   ++ GF+  V   
Sbjct: 90  HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+ +Y+  GR+  A  +FD +  R+VV+W ++ + Y   G   EA+ +F+KM++ GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P +  I++ L AC  +GDL+ G ++ K ++++++  +  +  +L+++Y+KC K+++A  +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  K +V+W+ MI GYA N    E +  F +M  +N+KPD F++V  + + A L  +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              +W  +L+ R  F  N+F+  ALIDMYAKCGA+     +F  M E+ +   N  I G 
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             +G  K +  +F +  +    P+  TFL  +  C H+GL+++G+ +F ++   Y ++  
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HYG MVDL GRAG L++A+  I  MP+ P   V+GA+L  C++ K+ +L E     L 
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
            L+P   G +V L+NIY+    WD+ A+VR +M KKG++K PG S +EL+ +VH F +  
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
             HP S +IY  LE L +E++  G+VP T  +  DVE+  +E +L  HSEKLA+A GL++
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  G  I + KNLRVCGDCH   K IS +T REI+VRD +RFHCF NG CSC DYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 248/494 (50%), Gaps = 37/494 (7%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           LY++++ G+       + +   + +R   +    + +  +LK C      + G ++H  +
Sbjct: 78  LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  GF+ D+ AMT ++++Y+  G++ +A+K+FD +P+R +V+W  + +G+  +G    A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           DL  +M E G + D   IV +L A  +VG L  G+ +  Y           V T LV++Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           AKCG++E AR VFD M  +++V+W++MI  Y     P+E + +F +ML + ++P   +I+
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +CA LG L+ G +   L+D+ +  T++ M N+LI MY+KC  + R  ++F +++ K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V  NA I G A+NG V  +   F +     I PD  T + ++              +H
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VH 426

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A +I+              D      A+    AL     +R V  +  M+D +G  G+  
Sbjct: 427 AGLIQ--------------DGLRFFNAISCVYAL-----KRTVEHYGCMVDLWGRAGMLD 467

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV-MDHYGA 583
            A  L   M   P +PN I +   +S C    LV++     T LK+   +EP    +Y  
Sbjct: 468 DAYRLICDM---PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521

Query: 584 MVDLLGRAGRLNEA 597
           + ++    GR +EA
Sbjct: 522 LSNIYSVGGRWDEA 535



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 186/376 (49%), Gaps = 5/376 (1%)

Query: 45  LLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           L+L+ CT     +    +  L++K G        T L+S++     L+DA ++F+ IPD+
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR 175

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  +  GY       +A+    +M    V P  Y    +L  C  VG++  G+ I 
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +       + F  T +VN+YAKCG++E+A  +FD M E+D+V+W+T++ G+A N F +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             ++L  +M +E  + D  +IV  L + A++G+L +G+       R  F + + ++ AL+
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAKCG +     VF  MK +++V  N+ I+   + G+ + +  +F +    G+ P   
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L  C   G ++ G+ F + +     L   V     ++ ++ +   +D A  +   
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475

Query: 401 LQGK-TLVSWNAMILG 415
           +  +   + W A++ G
Sbjct: 476 MPMRPNAIVWGALLSG 491


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/615 (39%), Positives = 377/615 (61%), Gaps = 11/615 (1%)

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           +S N ++    + G  + AL ++++     ++    T   ++    +  SL  G  VH +
Sbjct: 47  ISNNQLIQSLCKEGKLKQALRVLSQESSPSQQ----TYELLILCCGHRSSLSDGLRVHRH 102

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +  G D    ++T L+ MY+  G V+ AR VFD  + R +  WN++  A    G+ EE 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACA----DLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           + ++ KM   GVE    T    L AC         L +G  +H  L +    + V +  +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTT 222

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIK 438
           L+ MY++   VD A+ +F+ +  + +VSW+AMI  YA+NG+  EAL  F +M   +K+  
Sbjct: 223 LVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+S TMVSV+ A A L+ +   + IH  ++R   +  + V++AL+ MY +CG +   + +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M++R V +WN +I  YG HG G+ A+++F +ML     P  +TF+  + ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           EEG   F S+ +D+GI+P ++HY  MVDLLGRA RL+EA   +Q M  EPG  V+G++LG
Sbjct: 403 EEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           +C+IH NVEL E+A+ RLF L+P   G +VLLA+IYA A MWD++ +V+ ++E +GLQK 
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PG   +E++ +++SF S    +P  ++I+ FL  L +++K  GY+P T  + +++E   +
Sbjct: 523 PGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E ++  HSEKLA+AFGL+N+S G  I I KNLR+C DCH  TK+IS    +EI+VRD++R
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNR 642

Query: 798 FHCFKNGVCSCGDYW 812
           FH FKNGVCSCGDYW
Sbjct: 643 FHRFKNGVCSCGDYW 657



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 201/403 (49%), Gaps = 8/403 (1%)

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           +R+   + +P    Y  L+  CG    +  G  +H  ++ NG   D F  T ++ MY+  
Sbjct: 66  LRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDL 125

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G ++ A K+FD+  +R +  WN +       G  E  L L  +M+  G   D  T   +L
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185

Query: 247 PAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            A          L  GK +H +  R G++S V + T LVDMYA+ G V+ A  VF+GM  
Sbjct: 186 KACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPV 245

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGI 360
           RNVVSW++MIA Y + G   EA+R F++M+ +  +  P +VT++  L ACA L  LE+G 
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGR 305

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +  L + + + ++L++MY +C K+D    +F ++  + +VSWN++I  Y  +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHG 365

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVM 479
              +A+  F +M +    P   T VSV+ A +   ++   K +   + R    +  V   
Sbjct: 366 YGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHY 425

Query: 480 TALIDMYAKCGAVG-TARALFDMMNERHVTTWNVMIDGYGTHG 521
             ++D+  +   +   A+ + DM  E     W  ++     HG
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 207/393 (52%), Gaps = 16/393 (4%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTK 77
           L +    LSQ +    + Y     LL+  C   +SL +  R+   I+ +G        TK
Sbjct: 62  LKQALRVLSQESSPSQQTYE----LLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATK 117

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++    S+  A +VF+    +   +++ + +        ++ +    +M    V   
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESD 177

Query: 138 VYNYTYLLKVC----GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
            + YTY+LK C         + +GKEIH  L   G++  ++ MT +V+MYA+ G ++ A 
Sbjct: 178 RFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYAS 237

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG--DFITIVSILPAVAN 251
            +F+ MP R++VSW+ ++A +A+NG A  AL     M  E +    + +T+VS+L A A+
Sbjct: 238 YVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS 297

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           + +L  G+ +HGY +R G DSI+ V +ALV MY +CG+++  + VFD M  R+VVSWNS+
Sbjct: 298 LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSL 357

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQL 369
           I++Y   G   +A++IF++ML  G  PT VT +  L AC+  G +E G  +F     D  
Sbjct: 358 ISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDH- 416

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +   V     ++ +  +  ++D AA +   ++
Sbjct: 417 GIKPQVEHYACMVDLLGRANRLDEAAKMVQDMR 449



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 149/315 (47%), Gaps = 11/315 (3%)

Query: 50  CTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYH 107
           CT+  L + + I   + + G        T LV ++ ++  +  A+ VF  +P +    + 
Sbjct: 193 CTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWS 252

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
            M+  YAK     +A+     M  +  D +P       +L+ C  +  + +G+ IHG ++
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYIL 312

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             G    L  ++ +V MY +CG+++   ++FDRM +RD+VSWN++++ +  +G+   A+ 
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQ 372

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMY 284
           +   M   G     +T VS+L A ++ G +  GK +     R  G    V     +VD+ 
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLL 432

Query: 285 AKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV-- 341
            +  R+ E A++V D         W S++ +    GN E A R  +++    +EP N   
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGN 490

Query: 342 -TIMEALHACADLGD 355
             ++  ++A A + D
Sbjct: 491 YVLLADIYAEAQMWD 505


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 397/714 (55%), Gaps = 76/714 (10%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRM-- 230
           A T +V+ YA  G++ ++   FD +P   RD V  N +++ FA+   A  A+ +   +  
Sbjct: 91  AATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLA 150

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKA--VHGYAMRAGFDSIVNVSTALVDMYAKC- 287
            ++  R D  +  S+L AV  +  L +     +H    + G  ++++VS AL+ +Y KC 
Sbjct: 151 SDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCD 210

Query: 288 ---------------------------------GRVETARLVFDGMKSRNVVSWNSMIAA 314
                                            G V  AR  F+ +     V WN+MI+ 
Sbjct: 211 APGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISG 270

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH----KLLDQLK 370
           YV+ G   EA  +F++M+ + + P   T    L ACA+ G    G  VH    +L     
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330

Query: 371 LGTDVSMTNSLISMYSKCKKV-------------------------------DRAADIFS 399
               + + N+L+++YSK  K+                               D AA IF 
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           ++  K+ +SW  M+ GY   G   +AL  F +MRS+++KP  +T    + A  EL  +++
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKH 450

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            K +HA +++  FE +     AL+ MYA+CGAV  AR +F +M      +WN MI   G 
Sbjct: 451 GKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG G+ A+ELF++M+     P+ I+FL  ++AC+H+GLV++G  YF S+++D+GI P  D
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  ++DLLGRAGR+ EA D I+ MP EP   ++ A+L  C+I+ ++ELG  AA++LF++
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM 630

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
            P+  G ++LL+N Y+AA  W   A+VR +M  +G++K PGCS +E+ N+VH F  G TK
Sbjct: 631 VPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTK 690

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HP +  +Y FLE +  +++  GYVPDT  ++ D+  + +E +L +HSE+LA++FGLL   
Sbjct: 691 HPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLP 750

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            G+T+ + KNL++CGDCH A  ++S   GREI+VRD+ RFH FK+G CSCG+YW
Sbjct: 751 AGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 237/539 (43%), Gaps = 80/539 (14%)

Query: 76  TKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFL--IRMRY 131
           T LVS +     L D+A  F+  P+  +   L++ M+  +A+ +    AVS    +    
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 132 DDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC--- 186
           D + P  Y++T LL   G + +  +    ++H  +   G    L     ++ +Y KC   
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIV-------------------------------AGFA 215
           G   +A K+ D MPE+D ++W TIV                               +G+ 
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI-- 273
           Q+G    A +L  RM  +    D  T  S+L A AN G    GK+VHG  +R   D +  
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 274 --VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS--------------------- 310
             + V+ ALV +Y+K G++  A  +FD M  ++VVSWN+                     
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 311 ----------MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
                     M++ YV GG  E+A+++F +M  + V+P + T   A+ AC +LG L+ G 
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  L Q       S  N+L++MY++C  V  A  +F  +     VSWNAMI    Q+G
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
              EAL  F +M ++ I PD  + ++++ A     ++    ++  ++             
Sbjct: 513 HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572

Query: 480 TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKML 534
             LID+  + G +G AR L   M  E     W  ++ G   +G   LG  A +   KM+
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMV 631



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 177/385 (45%), Gaps = 37/385 (9%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           L  T +V    +   +  A   FE I  + D +++ M+ GY +     +A     RM   
Sbjct: 231 LTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSK 290

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI--VNGFSLD--LFAMTGVVNMYAKCGQ 188
            + P  + +T LL  C + G    GK +HGQ I     F  +  L     +V +Y+K G+
Sbjct: 291 RIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGK 350

Query: 189 IEEAYKMFDRMPERDLVSWNTI-------------------------------VAGFAQN 217
           I  A K+FD M  +D+VSWNTI                               V+G+   
Sbjct: 351 IAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHG 410

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G AE AL L  +M  E  +    T    + A   +G+L+ GK +H + ++ GF++  +  
Sbjct: 411 GLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAG 470

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            AL+ MYA+CG V+ ARLVF  M + + VSWN+MI+A  + G+  EA+ +F +M+ QG+ 
Sbjct: 471 NALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIY 530

Query: 338 PTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           P  ++ +  L AC   G ++ G  +   +     +         LI +  +  ++  A D
Sbjct: 531 PDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARD 590

Query: 397 IFSKLQGK-TLVSWNAMILGYAQNG 420
           +   +  + T   W A++ G   NG
Sbjct: 591 LIKTMPFEPTPAIWEAILSGCRING 615


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 392/711 (55%), Gaps = 75/711 (10%)

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           T +V  YA   ++  A   FD +P   RD V  N +++ +A+   A  A+ +   +   G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 235 R-RGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---- 287
             R D  +  ++L A  ++   S+R    +H   +++G    ++V  ALV +Y KC    
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 288 ------------------------------GRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                         G V  AR VF+ +  +  V WN+MI+ YV 
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG----T 373
            G   EA  +F++M+ + V     T    L ACA++G    G  VH  + +L+       
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331

Query: 374 DVSMTNSLISMYSKCKKV-------------------------------DRAADIFSKLQ 402
            + + N+L++ YSKC  +                               D+A ++F ++ 
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  +SW  M+ GY   G   +AL  F KMRS+N+KP  +T    I A  EL  +++ K 
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  +++  FE +     ALI MYA+CGAV  A  +F +M      +WN MI   G HG 
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A+ELF++M+     P+ I+FL  ++AC+HSGLV+EG  YF S+K+D+GI P  DHY 
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            ++DLLGRAGR+ EA D I+ MP EP  +++ A+L  C+   ++ELG  AA++LF++ P 
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G ++LL+N Y+AA  W   A+VR +M  +G++K PGCS +E  N+VH F  G TKHP+
Sbjct: 632 HDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPE 691

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +  +Y FLE +  +++  GYVPDT  + HD+E + +E++L +HSE+LA+ FGLLN  PG+
Sbjct: 692 AHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGA 751

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           T+ + KNLR+C DCH A  ++S   GREI+VRD+ RFH FK+G CSCG+YW
Sbjct: 752 TVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 391/675 (57%), Gaps = 7/675 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LLKVC +   +R G+ IH  LIV   S    D + +  ++N+Y KC +   A K+FD MP
Sbjct: 37  LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIG 258
           ER++VSW  ++ G+  +GF    L L   M    E R  +F+  V +  + +N G +  G
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATV-VFKSCSNSGRIEEG 155

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K  HG  ++ G  S   V   LV MY+ C     A  V D +   ++  ++S ++ Y+E 
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  +E + + +K  ++     N+T + +L   ++L DL   + VH  + +     +V   
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            +LI+MY KC KV  A  +F     + +     ++  Y Q+    EALN F KM +K + 
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ +T   ++ ++AELS+++    +H LV++S +  +V V  AL++MYAK G++  AR  
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M  R + TWN MI G   HGLG+ A+E F++M+     PN ITF+  + ACSH G V
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E+G+HYF  L K + ++P + HY  +V LL +AG   +A DF++  PIE  +  +  +L 
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLN 515

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC + +N  LG+K A    E  P++ G +VLL+NI+A +  W+ +AKVR++M  +G++K 
Sbjct: 516 ACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQ 737
           PG S + ++N+ H F +   +HP+   IY  ++ ++ +IK  GY PD   + HDV++  +
Sbjct: 576 PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQR 635

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E+ LS HSEKLA+A+GL+ +   S +++ KN+R+C DCH+A K IS ++ R I++RD +R
Sbjct: 636 EDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695

Query: 798 FHCFKNGVCSCGDYW 812
           FH F +G CSC DYW
Sbjct: 696 FHHFLDGQCSCCDYW 710



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 240/508 (47%), Gaps = 19/508 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY--DDVA 135
           L++L+ K      A ++F+ +P++    +  M+KGY   +  D  V  L +  +   +  
Sbjct: 75  LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQN-SGFDFEVLKLFKSMFFSGESR 133

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +  T + K C + G I  GK+ HG  +  G     F    +V MY+ C    EA ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            D +P  DL  +++ ++G+ + G  +  LD++ +   E    + +T +S L   +N+  L
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL 253

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +   VH   +R GF++ V    AL++MY KCG+V  A+ VFD   ++N+    +++ AY
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            +  + EEA+ +F KM  + V P   T    L++ A+L  L++G  +H L+ +      V
Sbjct: 314 FQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV 373

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+L++MY+K   ++ A   FS +  + +V+WN MI G + +G   EAL  F +M   
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433

Query: 436 NIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
              P+  T + V+ A + +  +     + + L+ +   + ++   T ++ + +K G    
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493

Query: 495 ARALFDMMN----ERHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           A    D M     E  V  W  +++       + LGK   E     +E    PND     
Sbjct: 494 AE---DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEY---AIE--KYPNDSGVYV 545

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIE 575
            +S         EG+    SL  + G++
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVK 573


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/724 (34%), Positives = 408/724 (56%), Gaps = 8/724 (1%)

Query: 14  NSTPTQTLHEHKH-----TLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIK 65
           NS  +  LH   H        Q   + +   R   A++L+ C+SL++     +I  L +K
Sbjct: 143 NSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK 202

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
            G     +  + L+ ++ K   L  + + F  +P+K    +  ++ G  +   L   +  
Sbjct: 203 MGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M+   V      +  + + C  +  +R G ++HG  +   F  D+   T  ++MY K
Sbjct: 263 FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMK 322

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           C  + +A K+F+ +P  +L S+N I+ G+A++     AL +   + + G   D +++   
Sbjct: 323 CNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGA 382

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
             A A +     G  VHG +M++   S + V+ A++DMY KCG +  A LVF+ M SR+ 
Sbjct: 383 FRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN++IAA+ + GN E+ + +F  ML  G+EP   T    L ACA    L  G+ +H  
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           + + +LG D  +  +LI MYSKC  +++A  +  +L  +T+VSWNA+I G++   +  EA
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
              F KM    + PD+FT  +++   A L  +   K IHA +I+   + + ++ + L+DM
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 622

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y+KCG +   + +F+    R   TWN M+ GY  HGLG+ A+++F  M     KPN  TF
Sbjct: 623 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 682

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  + AC H GLVE+G+HYF S+  +YG++P ++HY  +VD++GR+G++++A + I+ MP
Sbjct: 683 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 742

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
            E    ++  +L  CKIH NVE+ EKAA  + +L+P++   +VLL+NIYA A MW+++ K
Sbjct: 743 FEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTK 802

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R +M   GL+K PGCS +E+K+EVH+F  G   HP+SK IY  L+ L DE+K  GY+PD
Sbjct: 803 LRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 862

Query: 726 TNSI 729
           T+ I
Sbjct: 863 TDFI 866



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 281/551 (50%), Gaps = 12/551 (2%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+ +P++    +++++ GY         +   ++M           +  +LK C  
Sbjct: 127 AQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSS 186

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           + +   G +IHG  +  GF  D+   + +++MYAKC +++ + + F  MPE++ VSW+ I
Sbjct: 187 LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAI 246

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +AG  QN      L+L   M + G      T  S+  + A + +LR+G  +HG+A++  F
Sbjct: 247 IAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF 306

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            + V + TA +DMY KC  +  A+ +F+ + + N+ S+N++I  Y       EA+ +F+ 
Sbjct: 307 GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRL 366

Query: 331 MLDQGVEPTNVTIMEALHACADL-GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +   G+    V++  A  ACA + GDLE G+ VH L  +    +++ + N+++ MY KC 
Sbjct: 367 LQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCG 425

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +  A  +F ++  +  VSWNA+I  + QNG   + L+ F  M    ++PD FT  SV+ 
Sbjct: 426 ALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLK 485

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A    +     IH  +I+S    + FV  ALIDMY+KCG +  A  L D + E+ V +
Sbjct: 486 ACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS 545

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN +I G+      + A + F+KMLE    P++ T+   +  C++   VE G      + 
Sbjct: 546 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 605

Query: 570 KDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           K    E   D Y    +VD+  + G + +     +K P    +T + AM+     H    
Sbjct: 606 KK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVT-WNAMVCGYAQHG--- 658

Query: 628 LGEKAANRLFE 638
           LGE+A  ++FE
Sbjct: 659 LGEEAL-KIFE 668



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 262/544 (48%), Gaps = 37/544 (6%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           ++++ + C D   +  GK+ H ++I+  F   +F    ++ MY KC  +E A+K+FD MP
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--------------------------- 233
           +RD VSWN ++ G+A  G   +A  L   M E                            
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164

Query: 234 -GRRG---DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
            GR G   D  T   +L + +++     G  +HG A++ GFD  V   +AL+DMYAKC +
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ +   F  M  +N VSW+++IA  V+  +    + +F++M   GV  +  T      +
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA L  L  G  +H    +   GTDV +  + + MY KC  +  A  +F+ L    L S+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           NA+I+GYA++ +  EAL  F  ++   +  D  ++     A A +        +H L ++
Sbjct: 345 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 404

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
           S  + N+ V  A++DMY KCGA+  A  +F+ M  R   +WN +I  +  +G  +  + L
Sbjct: 405 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 464

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLL 588
           F  ML+   +P++ T+   + AC+    +  G+      +K   G++  +    A++D+ 
Sbjct: 465 FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMY 522

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL--DPDEGGY 646
            + G + +A     ++  E  +  + A++    + K  E  +K  +++ E+  DPD   Y
Sbjct: 523 SKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 581

Query: 647 HVLL 650
             +L
Sbjct: 582 ATIL 585



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 215/489 (43%), Gaps = 54/489 (11%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T   I    ++  +L  GK  H   +   F   V V+  L+ MY KC  +E A  VFDGM
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 301 KSRN-------------------------------VVSWNSMIAAYVEGGNPEEAMRIFQ 329
             R+                               VVSWNS+I+ Y+  G+  + + +F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M   G      T    L +C+ L D   GI +H L  ++    DV   ++L+ MY+KCK
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           K+D +   F  +  K  VSW+A+I G  QN  +   L  F +M+   +     T  SV  
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           + A LS +R    +H   +++ F  +V + TA +DMY KC  +  A+ LF+ +   ++ +
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-----HSGLVEEGIHY 564
           +N +I GY     G  A+ +F  + +     ++++   A  AC+       GL   G+  
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 403

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
            +  + +  +        A++D+ G+ G L EA    ++M     ++ + A++ A + + 
Sbjct: 404 KSLCQSNICVA------NAILDMYGKCGALVEACLVFEEMVSRDAVS-WNAIIAAHEQNG 456

Query: 625 NVELGEKAANRLFE--LDPDEGGYHVLLANIYAAASMWDKL-----AKVRTIMEKKGLQK 677
           N E        + +  ++PDE  Y     ++  A + W  L        R I  + GL  
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTY----GSVLKACAGWQALNCGMEIHNRIIKSRLGLDS 512

Query: 678 TPGCSLVEL 686
             G +L+++
Sbjct: 513 FVGIALIDM 521


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/638 (39%), Positives = 380/638 (59%), Gaps = 5/638 (0%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +++ Y++ G I    K FD MP  D+VSWN ++A +  N   +        M  +G    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
            + I   L A  +   + IG+++    +  G +    V TALV MY K G    A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+VV+W++M+AAY   G+P EA+ +F++M   GV P  VT++  L ACA LGDL  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H+ ++   + + V +  +L+++Y KC +++ A + F ++  K +V+W+A+   YA+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH--ALVIRSCFEKNV 476
           N R  +A+    +M  + + P+S T VSV+ A A ++ ++  + IH    V+    E +V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LE 535
           +V+TAL++MY+KCG +  A  +FD +    +  WN +I     HG  + A+ELF +M LE
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
           G  +P  ITF   + ACSH+G++++G  +F S   D+GI P  +H+G MVDLLGRAG + 
Sbjct: 361 G-LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           ++ D +  MP EP    + A LGAC+ ++N++    AA  LF+LDP +   +VLL+N+YA
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYA 479

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
            A  W  +A++R  M+     K  G S +E+K+ VH F SG   HP+   I+  L+ L  
Sbjct: 480 KAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTK 539

Query: 716 EIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
            +K AGYVPDT  + HDV+  V+E ++  HSEKLA+AF LL +  GS I + KNLRVC D
Sbjct: 540 LMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCND 599

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH A+K+IS +  REI+VRD +RFH F+NG CSCGDYW
Sbjct: 600 CHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 196/375 (52%), Gaps = 2/375 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + +  ++    + F+ +P      ++ ++  Y      D    F   M    + P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               +  L  C D  EI  G+ I   ++  G   +    T +V+MY K G   +A  +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RM  RD+V+W+ +VA +A+NG    AL L  +M  +G   + +T+VS L A A++G LR 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H      G  S V V TALV++Y KCGR+E A   F  +  +NVV+W+++ AAY  
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDV 375
                +A+R+  +M  +G+ P + T +  L ACA +  L++G  +H+    L  G  +DV
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  +L++MYSKC  +  A D+F K+    LV WN++I   AQ+G+  +AL  F +MR +
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 436 NIKPDSFTMVSVIPA 450
            ++P   T  SV+ A
Sbjct: 361 GLQPTIITFTSVLFA 375



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 178/321 (55%), Gaps = 5/321 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++ L  CT  +E+   R I   I+ +G+ ++ + QT LVS++ K    +DAA VF  +  
Sbjct: 65  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  M+  YA+     +A+    +M  D VAP        L  C  +G++R G  +
Sbjct: 125 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALM 184

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H ++   G    +   T +VN+Y KCG+IE A + F ++ E+++V+W+ I A +A+N   
Sbjct: 185 HQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRN 244

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH--GYAMRAGFDSIVNVST 278
             A+ ++ RM  EG   +  T VS+L A A + +L+ G+ +H     +  G +S V V T
Sbjct: 245 RDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLT 304

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV+MY+KCG +  A  +FD +   ++V WNS+IA   + G  E+A+ +F++M  +G++P
Sbjct: 305 ALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364

Query: 339 TNVTIMEALHACADLGDLERG 359
           T +T    L AC+  G L++G
Sbjct: 365 TIITFTSVLFACSHAGMLDQG 385


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/713 (35%), Positives = 393/713 (55%), Gaps = 75/713 (10%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           A T +V  YA  G++  A   FD +P+  RD V  N +++ +A+   A  A+ +   +  
Sbjct: 90  AATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 233 EGR-RGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC-- 287
            G  R D  +  ++L A  ++   S+R    +    +++G   +++VS ALV +Y KC  
Sbjct: 150 SGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEA 209

Query: 288 --------------------------------GRVETARLVFDGMKSRNVVSWNSMIAAY 315
                                           G V  AR VF+ +  +  V WN+MI+ Y
Sbjct: 210 LEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGY 269

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--- 372
           V  G   EA  +F++M+ + V     T    L ACA+ G    G  VH  + +L+     
Sbjct: 270 VHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 373 -TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA-------------------- 411
              + + N+L+++YSKC  +  A  IF  ++ K +VSWN                     
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 412 -----------MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
                      M+ GY   G   +AL  F +MR++++KP  +T    I A  EL  +++ 
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +H  +++  FE +     ALI MYA+CGAV  A  +F +M      +WN MI   G H
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQH 509

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G+ A+ELF++M+     P+ I+FL  ++AC+HSGLV+EG  YF S+K+D+GI P  DH
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  ++DLLGRAGR+ EA D I+ MP EP  +++ A+L  C+   ++ELG  AA++LF++ 
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P   G ++LL+N Y+AA  W   A+VR +M  +G++K PGCS +E  N+VH F  G TKH
Sbjct: 630 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKH 689

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
           P++ ++Y FLE +   ++  GYVPDT  + HD+E + +E++L +HSE+LA+ FGLL   P
Sbjct: 690 PEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPP 749

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+T+ + KNLR+C DCH    ++S   GREI+VRD+ RFH FK+G CSCG+YW
Sbjct: 750 GATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/655 (38%), Positives = 380/655 (58%), Gaps = 9/655 (1%)

Query: 166  VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            ++G  L+L     +++MY KC +   AYK+FD MPER++VSW  +++G   NG    +L 
Sbjct: 397  LSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLS 456

Query: 226  LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            L T M  +G   +  T  + L A   + +L  G  +HG+ ++ GF+ +V V  +LVDMY+
Sbjct: 457  LFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 516

Query: 286  KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTI 343
            KCGR+  A  VF  M  R+++SWN+MIA YV  G    A+  F  M +  ++  P   T+
Sbjct: 517  KCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTL 576

Query: 344  MEALHACADLGDLERGIFVHKLL--DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
               L AC+  G +  G  +H  L        +  ++T SL+ +Y KC  +  A   F ++
Sbjct: 577  TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQI 636

Query: 402  QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
            + KT++SW+++ILGYAQ G   EA+  F +++  + + DSF + S+I   A+ ++++  K
Sbjct: 637  KEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGK 696

Query: 462  WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             + ALV++        V  +L+DMY KCG V  A   F  M  + V +W VMI GYG HG
Sbjct: 697  QMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHG 756

Query: 522  LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            LGK AV +FNKML    +P+++ +L  +SACSHSG+++EG   F+ L +  GI+P ++HY
Sbjct: 757  LGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHY 816

Query: 582  GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
              +VDLLGRAGRL EA   +  MPI+P + ++  +L  C++H ++ELG++    L  +D 
Sbjct: 817  ACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDG 876

Query: 642  DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
                 +V+++N+Y  A  W++    R +   KGLQK  G S VE++ EVH F SG   HP
Sbjct: 877  KNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHP 936

Query: 702  QSKRIYTFLETLIDEIKAA-GYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLN--- 756
             +  I   L+ +   ++   GYV    + +HD++D  +E  L +HSEKLAI   L     
Sbjct: 937  LTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGL 996

Query: 757  SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            +  G TI + KNLRVC DCH   K +S +T    +VRD  RFH F++G CSCGDY
Sbjct: 997  NQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 263/524 (50%), Gaps = 41/524 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++CK      A +VF+ +P++    +  ++ G+     L+ ++S    M    + P 
Sbjct: 410 LIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPN 469

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + ++  LK CG +  + +G +IHG  +  GF + +     +V+MY+KCG+I EA K+F 
Sbjct: 470 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 529

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSL 255
            M  R L+SWN ++AG+   G+   AL     M E     R D  T+ S+L A ++ G +
Sbjct: 530 WMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMI 589

Query: 256 RIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             GK +HG+ +R+GF   S   ++ +LVD+Y KCG + +AR  FD +K + ++SW+S+I 
Sbjct: 590 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLIL 649

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G+  EAM +F+++ +   +  +  +   +   AD   L++G  +  L+ +L  G 
Sbjct: 650 GYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGL 709

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           + S++NSL+ MY KC  VD A   F+++Q K ++SW  MI GY ++G   +A++ F KM 
Sbjct: 710 ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKML 769

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAV 492
             NI+PD    ++V+ A +   +I+  + + + ++ +   +  V     ++D+  + G +
Sbjct: 770 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRL 829

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+ L D M                                  P KPN   +   +S C
Sbjct: 830 KEAKHLVDTM----------------------------------PIKPNVGIWQTLLSLC 855

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              G +E G      L +  G  P   +Y  M +L G+AG  NE
Sbjct: 856 RVHGDIELGKEVGKILLRIDGKNPA--NYVMMSNLYGQAGYWNE 897



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 8/255 (3%)

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           LE  IF +        G ++  +N LI MY KC++   A  +F  +  + +VSW A++ G
Sbjct: 385 LEFIIFTNSNFRLSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSG 444

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +  NG +N +L+ F +M  + I P+ FT  + + A   L+ +     IH   ++  FE  
Sbjct: 445 HVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 504

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           V V  +L+DMY+KCG +  A  +F  M  R + +WN MI GY   G G  A+  F  M E
Sbjct: 505 VEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQE 564

Query: 536 GPTK--PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
              K  P++ T    + ACS +G++  G  IH F  ++  +         G++VDL  + 
Sbjct: 565 AKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL-VRSGFHCPSSATITGSLVDLYVKC 623

Query: 592 GRL---NEAWDFIQK 603
           G L    +A+D I++
Sbjct: 624 GNLFSARKAFDQIKE 638


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/800 (34%), Positives = 442/800 (55%), Gaps = 90/800 (11%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK----YNSLSDAARVFEPIPDKLDALY 106
           +++++LR+    ++ + L   H +   L+ + C     + +  D+     P PD   ++Y
Sbjct: 12  SNIRQLRQFHGHLVHNSL-HSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDA--SVY 68

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
             MLK Y++  + +  VS        ++ P  + Y YL+K+ G     + G   H  ++ 
Sbjct: 69  SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNMFHAYVLK 123

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
            G   D F    +++MYAK GQ++ A  +F++M ER L  WN++++G  ++G        
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSG-------- 175

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
                      + + + +++PA  N+ +                       T++V  YAK
Sbjct: 176 --------NETEAVVLFNMMPA-RNIITW----------------------TSMVTGYAK 204

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
            G +E+AR  FD M  R+VVSWN+M +AY +   P+EA+ +F +ML++G+ P + T +  
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264

Query: 347 LHACADLGDLERGIFVHKLLDQL------------------------------KLGTDVS 376
           + +C+ +GD      + +++DQ                               +LG+  +
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRN 324

Query: 377 MT--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
               N +IS Y++  K+  A ++F  +  + +VSWN+MI GYAQNG    ++  F +M S
Sbjct: 325 AVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS 384

Query: 435 -KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
             +I+PD  T+ SV+ A   +  ++ + W+  +V     +  +    +LI MY+KCG+V 
Sbjct: 385 CMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVA 444

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  M  R V ++N +I G+  +G GK A++L   M E   +P+ +T++  ++ACS
Sbjct: 445 DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACS 504

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GL+ EG + F S++      P +DHY  MVDLLGRAG L+EA   IQ MP++P   V+
Sbjct: 505 HAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVY 559

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G++L A +IHK V LGE AA++LFEL+P   G +VLL+NIYA+   W+ + +VR +M+K 
Sbjct: 560 GSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKG 619

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
           GL+K+ G S VE K +VH F  G   H QSK IY  L  L  ++K  G+V D + ++ DV
Sbjct: 620 GLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDV 679

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  +E +L +HSEKLAI F LL S  G+TI + KNLR+C DCH A K IS + GREI+V
Sbjct: 680 EEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVV 739

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFHCF  G+CSC DYW
Sbjct: 740 RDNNRFHCFSEGMCSCHDYW 759


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/659 (38%), Positives = 394/659 (59%), Gaps = 16/659 (2%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           I  +P   LL +C ++  LR+I  L++  GL +  L +TKLVSL+  +  +  A  +F+ 
Sbjct: 37  ISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDR 96

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFL-IRMR-----YDDVAPVVYNYTYLLKVCGDV 151
           I +     +  M++ Y    S  + V F   R+R     YD+V      ++ +LK C ++
Sbjct: 97  IRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVV-----FSIVLKACSEL 151

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E   G+++H Q++  G S D F +TG+V+MYAKC ++E++ ++FD + +R++V W +++
Sbjct: 152 RETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMI 210

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            G+ QN   +  L L  RM E    G+  T+ S++ A   +G+L  GK VHGY +++GFD
Sbjct: 211 VGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFD 270

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
               + T L+D+Y KCG +  A  VFD + + ++VSW +MI  Y + G P EA+++F   
Sbjct: 271 LNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDE 330

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT-DVSMTNSLISMYSKCKK 390
             + + P  VT    L ACA  G L  G  VH L   +KLG+ D +  N+L+ MY+KC  
Sbjct: 331 RWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCL--GIKLGSEDATFENALVDMYAKCHM 388

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A  +F  +  K +++WN++I GY QNG   EAL  F +MRS ++ PD+ T+VSV+ A
Sbjct: 389 IGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSA 448

Query: 451 LAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
            A +   R    +H   I++     +V+V TAL++ YAKCG   +AR +FD M E++  T
Sbjct: 449 CASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTIT 508

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           W+ MI GYG  G    ++ELF  ML+   +PN++ F   +SACSHSG++ EG  YF ++ 
Sbjct: 509 WSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMC 568

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           + Y   P M HY  MVDLL RAGRL EA DFI+K+PI+P +++ GA L  C++H   +LG
Sbjct: 569 QVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLG 628

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           E A  R+ EL PD+  Y+VL++N+YA+   W +  +V  +M+++GL K PG SLV+++ 
Sbjct: 629 EVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIET 687


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/738 (35%), Positives = 409/738 (55%), Gaps = 25/738 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
            K +S   +      A  VF  +P +    Y+ M+ GY + +  + A +   +M   D+ 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                 T  ++ C  +G+ RR  ++  +        D+ +   +++ YA+ G ++EA ++
Sbjct: 113 SWNVMLTGYVRNC-RLGDARRLFDLMPEK-------DVVSWNSLLSGYAQNGYVDEAREV 164

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MPE++ +SWN ++A +  NG  E A  L     E     D I+   ++     V   
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGF--VRKK 218

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           ++G A   +      D+I      ++  YA+ G +  AR +FD   +R+V +W +M++ Y
Sbjct: 219 KLGDARWLFDKMPVRDAIS--WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGY 276

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+ G  +EA   F +M ++     N  I  A +      D+ R +F      +     ++
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMI--AGYVQTKKMDIARELF------ESMPCRNI 328

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S  N++I+ Y +   + +A   F  +  +  VSW A+I GYAQ+G   EALN F +++  
Sbjct: 329 SSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
               +  T    +   A+++ +   K IH   ++  +    FV  AL+ MY KCG++  A
Sbjct: 389 GESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEA 448

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
              F+ + E+ V +WN M+ GY  HG G+ A+ +F  M     KP++IT +  +SACSH+
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GL++ G  YF S+ KDYG+ P   HY  M+DLLGRAGRL EA D I+ MP +PG   +GA
Sbjct: 509 GLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGA 568

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGA +IH N ELGEKAA  +F+++P   G +VLL+N+YAA+  W    K+R+ M   G+
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGV 628

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           QK PG S VE++N++H+F  G   HP+ +RIY +LE L  +++  GYV  T  + HDVE+
Sbjct: 629 QKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEE 688

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E++L  HSEKLA+AFG+L    G  I + KNLRVC DCH+A K+IS + GR II+RD
Sbjct: 689 EEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRD 748

Query: 795 MHRFHCFKNGVCSCGDYW 812
            HRFH F  G CSCGDYW
Sbjct: 749 SHRFHHFNEGFCSCGDYW 766



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 53/268 (19%)

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D+   N  IS + +    D A  +F+ +  ++ VS+NAMI GY +N + N A N F +M 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
                                                  E+++F    ++  Y +   +G
Sbjct: 108 ---------------------------------------ERDLFSWNVMLTGYVRNCRLG 128

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            AR LFD+M E+ V +WN ++ GY  +G    A E+F+ M E     N I++   ++A  
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYV 184

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+G +EE    F S K D+ +       G  V    R  +L +A     KMP+   I+  
Sbjct: 185 HNGRIEEACLLFES-KSDWDLISWNCLMGGFV----RKKKLGDARWLFDKMPVRDAISWN 239

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDP 641
             + G  +       G   A RLF+  P
Sbjct: 240 TMISGYAQGG-----GLSQARRLFDESP 262


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/649 (38%), Positives = 388/649 (59%), Gaps = 5/649 (0%)

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           G+  + F    ++++Y KC + ++A  +F  +  +++ SW  ++A FA+N   +      
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             M  +G     + I   L A  +   + IG+++    +  G +    V TALV +Y K 
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G    A  VF  M  R+VV+W++M+AAY   G+P EA+ +F++M   GV P  VT++  L
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            ACA LGDL  G  +H+ ++   + + V +  +L+++Y KC +++ AA+ F ++  K +V
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV 244

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL- 466
           +W+A+   YA+N R  +A+    +M  + + P+S T VSV+ A A ++ ++  + IH   
Sbjct: 245 AWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERI 304

Query: 467 -VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            V+    E +V+V+TAL++MY+KCG +  A  +FD +    +  WN +I     HG  + 
Sbjct: 305 HVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEK 364

Query: 526 AVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
           A+ELF +M LEG  +P  ITF   + ACSH+G++++G  +F S   D+GI P  +H+G M
Sbjct: 365 ALELFERMRLEG-LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 423

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGRAG + ++ D +  MP EP    + A LGAC+ ++N++    AA  LF+LDP + 
Sbjct: 424 VDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKR 483

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +VLL+N+YA A  W  +A++R  M+     K  G S +E+K+ VH F SG   HP+  
Sbjct: 484 APYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIG 543

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I+  L+ L   +KAAGYVPDT  + HDV+  V+E ++  HSEKLA+AF LL +  GS I
Sbjct: 544 EIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPI 603

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + KNLRVC DCH A+K+IS +  REI+VRD +RFH F+NG CSCGDYW
Sbjct: 604 RVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 198/375 (52%), Gaps = 2/375 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ L+ K +   DA  VF  I  K    +  ML  +A+    D    F   M    + P 
Sbjct: 16  LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPG 75

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
               +  L  C D  EI  G+ I   ++  G   +    T +V++Y K G   +A  +F 
Sbjct: 76  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFL 135

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RM  RD+V+W+ +VA +A+NG    AL L  +M  +G   + +T+VS L A A++G LR 
Sbjct: 136 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 195

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H      G  S V V TALV++Y KCGR+E A   F  +  +NVV+W+++ AAY  
Sbjct: 196 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYAR 255

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDV 375
                +A+R+  +M  +G+ P + T +  L ACA +  L++G  +H+ +  L  G  +DV
Sbjct: 256 NDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDV 315

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  +L++MYSKC  +  A ++F K+    LV WN++I   AQ+G+  +AL  F +MR +
Sbjct: 316 YVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 375

Query: 436 NIKPDSFTMVSVIPA 450
            ++P   T  SV+ A
Sbjct: 376 GLQPTIITFTSVLFA 390



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 179/321 (55%), Gaps = 5/321 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++ L  CT  +E+   R I   I+ +G+ ++ + QT LVSL+ K    +DAA VF  +  
Sbjct: 80  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSH 139

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  M+  YA+     +A+    +M  D VAP        L  C  +G++R G  +
Sbjct: 140 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALM 199

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H ++   G    +   T +VN+Y KCG+IE A + F ++ E+++V+W+ I A +A+N   
Sbjct: 200 HQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRN 259

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG--YAMRAGFDSIVNVST 278
             A+ ++ RM  EG   +  T VS+L A A + +L+ G+ +H   + +  G +S V V T
Sbjct: 260 RDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLT 319

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV+MY+KCG +  A  +FD +   ++V WNS+IA   + G  E+A+ +F++M  +G++P
Sbjct: 320 ALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379

Query: 339 TNVTIMEALHACADLGDLERG 359
           T +T    L AC+  G L++G
Sbjct: 380 TIITFTSVLFACSHAGMLDQG 400


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/684 (37%), Positives = 392/684 (57%), Gaps = 14/684 (2%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           + +Y  LL  C  + E+R+   +H Q+       + F    +V+ Y+K G +  A   F 
Sbjct: 35  INDYASLLWQCRGLDEVRK---LHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFG 91

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           R+   +  SWN ++A +AQNG    A  L   M  +G R + +T+ + L A     +L +
Sbjct: 92  RITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLAL 151

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ ++        +   +V ++L+ MY +C  +E A   FD    ++VV W +MI+AY  
Sbjct: 152 GRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAH 211

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                 A+ + ++M  +G++    T +  L ACA   DL  G+  H+      +G D S 
Sbjct: 212 NWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQ--RAAAIGLDRSS 269

Query: 378 T---NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           T    +L+++Y KC +VD A  +   +  +T VSW AMI  YAQNG   EA+N F  M  
Sbjct: 270 TVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDL 329

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVG 493
           +  +P   T++SV+ + A L  +   K IHA +  S  F +++ ++ A+I MY KCG + 
Sbjct: 330 EGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLE 389

Query: 494 TARALFDM--MNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAIS 550
            AR +F+   +  R V TW  MI  Y  +G+G+ A+ELF +ML +G T+PN +TFL  + 
Sbjct: 390 LAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLC 449

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI-QKMPIEPG 609
           ACSH G +E+   +F S+  D+G+ P  DHY  +VDLLGRAGRL EA   + +    E  
Sbjct: 450 ACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEAD 509

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
           +  + A L AC+++ ++E  ++AA R+ EL+P+     VLL+N+YAA      +A++R  
Sbjct: 510 VVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNE 569

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+  G++K  G S +E+ N VH F      HP+   IY+ LE L  EIK AGYVPDT  +
Sbjct: 570 MKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMV 629

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
             DV++  +  LL  HSE+LA+A G++++ PG+T+ + KNLRVC DCH ATK+IS + GR
Sbjct: 630 LRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGR 689

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           +IIVRD  RFH FK+GVCSCGDYW
Sbjct: 690 QIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/426 (32%), Positives = 216/426 (50%), Gaps = 6/426 (1%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A LL  C  L E+R++   I    L         LV  + K+ SL  A   F  I     
Sbjct: 39  ASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNA 98

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++ ++  YA+      A +    M    V P     +  L  C     +  G++++  
Sbjct: 99  HSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNEL 158

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +      +D    + ++ MY +C +IEEA + FDR PE+D+V W  +++ +A N     A
Sbjct: 159 IASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRA 218

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD-SIVNVSTALVD 282
           L+LV RM  EG +    T VS+L A A+   LR G A H  A   G D S   V+  LV+
Sbjct: 219 LELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVN 278

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +Y KCGRV+ AR V D M  R  VSW +MIAAY + GN  EA+ +FQ M  +G EP+++T
Sbjct: 279 LYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDIT 338

Query: 343 IMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS-- 399
           ++  + +CA LG L  G  +H ++         + + N++I+MY KC  ++ A ++F   
Sbjct: 339 LISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECV 398

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIR 458
            L+ +++V+W AMI  YAQNG   EA+  F +M      +P+  T +SV+ A + L  + 
Sbjct: 399 PLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLE 458

Query: 459 YAKWIH 464
            A W H
Sbjct: 459 QA-WEH 463


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/738 (35%), Positives = 409/738 (55%), Gaps = 25/738 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
            K +S   +      A  VF  +P +    Y+ M+ GY + +  + A +   +M   D+ 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                 T  ++ C  +G+ RR  ++  +        D+ +   +++ YA+ G ++EA ++
Sbjct: 113 SWNVMLTGYVRNC-RLGDARRLFDLMPEK-------DVVSWNSLLSGYAQNGYVDEAREV 164

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MPE++ +SWN ++A +  NG  E A  L     E     D I+   ++     V   
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGF--VRKK 218

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           ++G A   +      D+I      ++  YA+ G +  AR +FD   +R+V +W +M++ Y
Sbjct: 219 KLGDARWLFDKMPVRDAIS--WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGY 276

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+ G  +EA   F +M ++     N  I  A +      D+ R +F      +     ++
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMI--AGYVQTKKMDIARELF------ESMPCRNI 328

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S  N++I+ Y +   + +A   F  +  +  VSW A+I GYAQ+G   EALN F +++  
Sbjct: 329 SSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
               +  T    +   A+++ +   K IH   ++  +    FV  AL+ MY KCG++  A
Sbjct: 389 GESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEA 448

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
              F+ + E+ V +WN M+ GY  HG G+ A+ +F  M     KP++IT +  +SACSH+
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GL++ G  YF S+ KDYG+ P   HY  M+DLLGRAGRL EA D I+ MP +PG   +GA
Sbjct: 509 GLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGA 568

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGA +IH N ELGEKAA  +F+++P   G +VLL+N+YAA+  W    K+R+ M   G+
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGV 628

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           QK PG S VE++N++H+F  G   HP+ +RIY +LE L  +++  GYV  T  + HDVE+
Sbjct: 629 QKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEE 688

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E++L  HSEKLA+AFG+L    G  I + KNLRVC DCH+A K+IS + GR II+RD
Sbjct: 689 EEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRD 748

Query: 795 MHRFHCFKNGVCSCGDYW 812
            HRFH F  G CSCGDYW
Sbjct: 749 SHRFHHFNEGFCSCGDYW 766



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 213/457 (46%), Gaps = 36/457 (7%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+      ++ + + G  + A  +F+ MP R  VS+N +++G+ +N    LA +L  +M 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E   R  F   V +   V N    R+G A   + +    D +     +L+  YA+ G V+
Sbjct: 108 E---RDLFSWNVMLTGYVRNC---RLGDARRLFDLMPEKDVV--SWNSLLSGYAQNGYVD 159

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR VFD M  +N +SWN ++AAYV  G  EEA  +F+   D  +   N  +M       
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNC-LMGGFVRKK 218

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            LGD         L D++ +   +S  N++IS Y++   + +A  +F +   + + +W A
Sbjct: 219 KLGD------ARWLFDKMPVRDAISW-NTMISGYAQGGGLSQARRLFDESPTRDVFTWTA 271

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M+ GY QNG ++EA  +F +M  KN        VS    +A      Y +     + R  
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEMPEKN-------EVSYNAMIAG-----YVQTKKMDIAREL 319

Query: 472 FE----KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           FE    +N+     +I  Y + G +  AR  FDMM +R   +W  +I GY   G  + A+
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVMDHYGAMVD 586
            +F ++ +     N  TF CA+S C+    +E G   +  ++K  YG    + +  A++ 
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLA 437

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           +  + G ++EA D  + +  E  +  +  ML     H
Sbjct: 438 MYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARH 473



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 56/260 (21%)

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           ++GL++ G  YF  + ++Y + P   HY  M+DLLGR  RL E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+LGA +IH N ELGEKAA   F++ P   G                 ++K+R +    
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMRDV---- 857

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVE 733
           G+QK PG S  E++N++H+F  G            FL     E +  G++ + +      
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG-----------LFLSR---ERENIGFLEELDLKMRER 903

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI-RKNLRVCGDCHNATKYISLVTGREIIV 792
           +  +E  L   SE LA A G+L    G    + +K + VC DC +A K++S + GR I +
Sbjct: 904 EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITL 963

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD HRF+     +CSCG+YW
Sbjct: 964 RDSHRFN---ESICSCGEYW 980


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/676 (38%), Positives = 377/676 (55%), Gaps = 83/676 (12%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  LL  C  +  +    +IH Q+IV+GF     ++T ++N+Y+   + + A  +FD  
Sbjct: 54  HYPRLLSSCKHLNPLL---QIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDST 109

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P    + WN+++  + ++     AL++   M E+G                         
Sbjct: 110 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG------------------------- 144

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
                    G +  V +   LVDMY+K G ++ AR VFD M  R+VV+WN+MIA   +  
Sbjct: 145 ---------GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 195

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH--KLLDQLKLGTDVSM 377
           +P  A R+F +M+DQ  + +  T+M         G    G FV   +L D++KLG     
Sbjct: 196 DPYVARRVFDQMVDQD-DVSWGTMMA--------GYAHNGCFVEVLELFDKMKLGN---- 242

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
                                        V+WN +I  Y QNG   EA++ F +MR +N 
Sbjct: 243 -----------------------------VTWNVIIAAYMQNGHAKEAISSFHQMRLENF 273

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+S T VSV+PA A L+  R     HA +I+  F  N  V  +LIDMYAKCG +  +  
Sbjct: 274 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 333

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           LF+ M+ +   +WN M+ GY  HG G  A+ LF+ M E   + + ++F+  +SAC H+GL
Sbjct: 334 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 393

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG   F S+   Y I+P ++HY  MVDLLGRAG  +E   FI+ MP+EP   V+GA+L
Sbjct: 394 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           G+C++H NV+LGE A + L +L+P    + V+L++IYA +  W    K R+ M   GL+K
Sbjct: 454 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 513

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
           TPGCS VELKN+VH+F  G   HPQ + ++    TL+++++  GYVPD + +  +VE+  
Sbjct: 514 TPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 573

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E  L SHSE+LAI F LLN+ PGSTI I KNLRVC DCH  TK+IS +T R IIVRD  
Sbjct: 574 KEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDAT 633

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F++G+CSC DYW
Sbjct: 634 RFHHFEDGICSCNDYW 649



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 31/229 (13%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYA------------------------------KFASLD 120
           A RVF+ + D+ D  + TM+ GYA                              +     
Sbjct: 200 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAK 259

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +A+S   +MR ++  P    +  +L     +   R G   H  +I  GF  +      ++
Sbjct: 260 EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 319

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MYAKCGQ++ + K+F+ M  +D VSWN +++G+A +G  + A+ L + M E   + D +
Sbjct: 320 DMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 379

Query: 241 TIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTALVDMYAKCG 288
           + VS+L A  + G +  G+ + H  + +      +     +VD+  + G
Sbjct: 380 SFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 428


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/570 (42%), Positives = 345/570 (60%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           SI+ A A   +L   +A+H +  R+       +  +L+ MY KCG V  AR VFD M SR
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +VVSW  +IA Y +   P EA+ +   ML     P   T    L A    G    G  +H
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C+++D A  +F +L  K  VSWNA+I G+A+     
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
             L  F +M+        FT  S+  A A +  +   +W+HA +I+S  +   FV   ++
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MYAK G++  AR +FD M++R + TWN M+     +GLGK AV  F ++ +   + N I
Sbjct: 305 GMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQI 364

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFL  ++ACSH GLV+EG HYF  + KDY ++P +DHY + VDLLGRAG L EA  F+ K
Sbjct: 365 TFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   V+GA+LGAC++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   W+  
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDA 483

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS V+++N VH F +    HP+S  IY   E +   IK AGYV
Sbjct: 484 ARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYV 543

Query: 724 PDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           P+T + +  + +  +E  L  HSEK+A+AF L+N   G++I I KN+R+CGDCH+A KY+
Sbjct: 544 PNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYV 603

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V  REI+VRD +RFH F  G CSCGDYW
Sbjct: 604 SKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 1/389 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y  ++  C     +   + IH  L  +  + D F +  +++MY KCG + +A
Sbjct: 55  ELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDA 114

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD+MP RD+VSW  ++AG+AQN     A+ L+  M     R +  T  S+L A    
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G   IG+ +H  A++  +D  V V +AL+DMYA+C +++ A +VFD + S+N VSWN++I
Sbjct: 175 GGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALI 234

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           A +    + E  +  F +M   G   T+ T      A A +G LE+G +VH  L +    
Sbjct: 235 AGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQK 294

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + N+++ MY+K   +  A  +F ++  + LV+WN M+   AQ G   EA+ +F ++
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 354

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   I+ +  T +SV+ A +   +++  K    ++     +  +    + +D+  + G +
Sbjct: 355 RKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLL 414

Query: 493 GTARA-LFDMMNERHVTTWNVMIDGYGTH 520
             A   +F M  E     W  ++     H
Sbjct: 415 KEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 180/372 (48%), Gaps = 4/372 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           ++  C   K L   R I   + +S L         L+ ++CK  ++SDA  VF+ +P + 
Sbjct: 66  IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  ++ GYA+     +A+  L  M      P  + +T LLK  G  G    G+++H 
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHA 185

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +   +  D++  + +++MYA+C Q++ A  +FDR+  ++ VSWN ++AGFA+    E 
Sbjct: 186 LAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L     M   G      T  S+  A A +G+L  G+ VH + +++G      V   ++ 
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLG 305

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +  AR VFD M  R++V+WN+M+ A  + G  +EA+  F+++   G++   +T
Sbjct: 306 MYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQIT 365

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA-ADIFSKL 401
            +  L AC+  G ++ G     ++    +  ++    S + +  +   +  A   +F   
Sbjct: 366 FLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 425

Query: 402 QGKTLVSWNAMI 413
              T   W A++
Sbjct: 426 MEPTAAVWGALL 437



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 110/226 (48%)

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           + PT       + ACA   +L     +H  L +  L  D  + NSLI MY KC  V  A 
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F K+  + +VSW  +I GYAQN    EA+     M     +P+ FT  S++ A     
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
                + +HAL ++  ++++V+V +AL+DMYA+C  +  A  +FD +  ++  +WN +I 
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           G+     G+  +  F +M          T+    SA +  G +E+G
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 281


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/800 (34%), Positives = 442/800 (55%), Gaps = 90/800 (11%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK----YNSLSDAARVFEPIPDKLDALY 106
           +++++LR+    ++ + L   H +   L+ + C     + +  D+     P PD   ++Y
Sbjct: 12  SNIRQLRQFHGHLVHNSL-HSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDA--SVY 68

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
             MLK Y++  + +  VS        ++ P  + Y YL+K+ G  G +      H  ++ 
Sbjct: 69  SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNL-----FHAYVLK 123

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
            G   D F    +++MYAK GQ++ A  +F++M ER L  WN++++G  ++G        
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSG-------- 175

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
                      + + + +++PA  N+ +                       T++V  YAK
Sbjct: 176 --------NETEAVVLFNMMPA-RNIITW----------------------TSMVTGYAK 204

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
            G +E+AR  FD M  R+VVSWN+M +AY +   P+EA+ +F +ML++G+ P + T +  
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264

Query: 347 LHACADLGDLERGIFVHKLLDQL------------------------------KLGTDVS 376
           + +C+ +GD      + +++DQ                               +LG+  +
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRN 324

Query: 377 MT--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
               N +IS Y++  K+  A ++F  +  + +VSWN+MI GYAQNG    ++  F +M S
Sbjct: 325 AVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS 384

Query: 435 -KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
             +I+PD  T+ SV+ A   +  ++ + W+  +V     +  +    +LI MY+KCG+V 
Sbjct: 385 CMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVA 444

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  M  R V ++N +I G+  +G GK A++L   M E   +P+ +T++  ++ACS
Sbjct: 445 DAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACS 504

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GL+ EG + F S++      P +DHY  MVDLLGRAG L+EA   IQ MP++P   V+
Sbjct: 505 HAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVY 559

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G++L A +IHK V LGE AA++LFEL+P   G +VLL+NIYA+   W+ + +VR +M+K 
Sbjct: 560 GSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKG 619

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
           GL+K+ G S VE K +VH F  G   H QSK IY  L  L  ++K  G+V D + ++ DV
Sbjct: 620 GLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDV 679

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  +E +L +HSEKLAI F LL S  G+TI + KNLR+C DCH A K IS + GREI+V
Sbjct: 680 EEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVV 739

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFHCF  G+CSC DYW
Sbjct: 740 RDNNRFHCFSEGMCSCHDYW 759


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/780 (33%), Positives = 437/780 (56%), Gaps = 16/780 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           AL++  C  L ++    ++L   +K GL  +      L+ +F     +++A  +F  + +
Sbjct: 164 ALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE 223

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFL--IRMRYDDVAPVVYNYT---YLLKVCGDVGEIR 155
           +    +++++   A+    +++  +   +R+ ++++     NYT    LL +CG V  ++
Sbjct: 224 RDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEI-----NYTTLSILLSICGSVDYLK 278

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GK +HG  +  G   ++     ++++Y+  G+ ++A  +F RMPERDL+SWN+++A + 
Sbjct: 279 WGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYV 338

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           Q+G    AL +   M    +  +++T  S L A  +      GK +HG+ +  G    + 
Sbjct: 339 QDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELI 398

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +   L+  Y KC ++  A+ VF  M   + V+WN++I  +       EA+  F+ M +  
Sbjct: 399 IGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGS 458

Query: 336 VEPTN-VTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
               + +TI+  L +C    DL + GI +H          D  + +SLI+MY+KC  +  
Sbjct: 459 TSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHS 518

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           ++ IF +L  KT   WNA+I   A+ G   EAL    +MRS  I+ D F   + +   A+
Sbjct: 519 SSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAAD 578

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L+++   + +H   I+  FE + F++ A +DMY KCG +  A  +     +R   +WN +
Sbjct: 579 LAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTL 638

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I     HG    A E F+ ML+   KPN ++F+C +SACSH GLV+EG+ Y+ S+   YG
Sbjct: 639 ISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYG 698

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I+P ++H   M+DLLGR+GRL EA  FI +MPI P   V+ ++L +C+I++N++LG KAA
Sbjct: 699 IQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAA 758

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
             L ELDP +   +VL +N++A    W+ +  VR  M    +QK P  S V+ K  +  F
Sbjct: 759 KHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIF 818

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAF 752
             G   HPQ ++I   L  L+  +  AGYVPDT+ S+ D ++  +E+ + SHSE++A+AF
Sbjct: 819 GMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAF 878

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GL+N   GST+ I KNLRVCGDCH+  K++S V GR+I++RD +RFH F NG CSC DYW
Sbjct: 879 GLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 281/548 (51%), Gaps = 7/548 (1%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           KE  +     IK GL       T  V  +  Y  +S+A ++F  +PD+    + +++  Y
Sbjct: 76  KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY 135

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
           +   S  + ++   RMR++ +     N   ++  CG + +I  G ++ G  +  G    +
Sbjct: 136 SDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKV 195

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
            A   ++ M+  CG I EA  +F+ M ERD +SWN+I++  AQN   E +      M   
Sbjct: 196 SAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLV 255

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
               ++ T+  +L    +V  L+ GK VHG A++ G +S + +   L+ +Y+  GR + A
Sbjct: 256 HEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDA 315

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
            L+F  M  R+++SWNSM+A YV+ G    A+++F +ML    E   VT   AL AC D 
Sbjct: 316 ELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDP 375

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
                G  +H  +  L L  ++ + N+LI+ Y KC K+  A  +F ++     V+WNA+I
Sbjct: 376 EFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALI 435

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKP-DSFTMVSVIPA-LAELSVIRYAKWIHALVIRSC 471
            G+A N  +NEA+  F  MR  +    D  T+V+++ + L    +I+Y   IHA  + + 
Sbjct: 436 GGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTG 495

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +  V ++LI MYAKCG + ++  +FD +  +  + WN +I     +G G+ A++L  
Sbjct: 496 FDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVV 555

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLG 589
           +M     + +   F  A+S  +   ++EEG     S  K  G E  +DH+   A +D+ G
Sbjct: 556 RMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIK-LGFE--LDHFIINAAMDMYG 612

Query: 590 RAGRLNEA 597
           + G L++A
Sbjct: 613 KCGELDDA 620



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 245/487 (50%), Gaps = 7/487 (1%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K+  ++ A  VF+ + ++ +A ++ M+ GY +  S  +AV F   +    + P  + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 141 YTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
              L+  C     + + G + HG  I  G   D+F  T  V+ YA  G +  A KMF+ M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P+R++VSW +++  ++ NG  +  ++   RM  EG   +   I  ++ +   +  + +G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            + G+A++ G ++ V+ + +L+ M+  CG +  A  +F+ M  R+ +SWNS+I+A  +  
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 320 NPEEAMRIFQ--KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             EE+ R F   +++ + +  T ++I+  L  C  +  L+ G  VH L  +  L +++ +
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSIL--LSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+S+YS   +   A  IF ++  + L+SWN+M+  Y Q+GR   AL  F +M     
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + +  T  S + A  +       K +H  V+    +  + +   LI  Y KC  +  A+ 
Sbjct: 359 EINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKK 418

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND-ITFLCAISAC-SHS 555
           +F  M +    TWN +I G+  +     AV  F  M EG T   D IT +  + +C +H 
Sbjct: 419 VFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHE 478

Query: 556 GLVEEGI 562
            L++ GI
Sbjct: 479 DLIKYGI 485


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/743 (35%), Positives = 426/743 (57%), Gaps = 14/743 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHT-MLKGYAKFASLDDAVSFLIRMRYDDVAP 136
           L++++ K  ++  A RVF+ +    D +  T M    A+  +  +++  L  M    + P
Sbjct: 82  LLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRP 141

Query: 137 VVYNYTYLLKVCGDVGEIR-RGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYK 194
             +      + C      R  G  + G ++  GF   D+     +++M+A+ G +  A +
Sbjct: 142 NAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQR 201

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD + ER  V W  ++  + Q G A   ++L   M ++G   D  ++ S++ A   +GS
Sbjct: 202 VFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGS 261

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG---RVETARLVFDGMKSRNVVSWNSM 311
           +R+G+ +H  A+R G  S   VS  LVDMYAK      +E AR VF  M   NV+SW ++
Sbjct: 262 VRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTAL 321

Query: 312 IAAYVEGGNPEE-AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           I+ YV+ G  E   M +F++ML++ + P ++T    L ACA+L D + G  +H  + +  
Sbjct: 322 ISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTS 381

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +     + N+L+SMY++   ++ A   F +L    ++S +  +     N   +       
Sbjct: 382 IAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS------ 435

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           K+   +    +FT  S++ A A + ++   + +HAL +++ F  +  +  +L+ MYA+CG
Sbjct: 436 KIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCG 495

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            +  A   FD M + +V +W  +I G   HG  K A+ +F+ M+    KPND+T++  +S
Sbjct: 496 YLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLS 555

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           ACSH GLV+EG  +F S++KD+G+ P M+HY  +VDLL R+G + EA  FI +MP +   
Sbjct: 556 ACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADA 615

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V+  +L AC+ + N E+GE AAN +  L+P +   +VLL+N+YA A +WD++A++R++M
Sbjct: 616 LVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLM 675

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
             K L K  G S +++ N +H F +G T HP +  IY  L TLI EIK  GYVPDT+ + 
Sbjct: 676 RDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVL 735

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           HD+ + ++E  L  HSEK+A+AFGL+ +S    + I KNLRVC DCH+A KYIS  TGRE
Sbjct: 736 HDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGRE 795

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II+RD +RFH  K+G+CSCG+YW
Sbjct: 796 IILRDSNRFHRMKDGICSCGEYW 818



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 25/474 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PE 201
           LL      G++R G+ +H +L+ +     D      ++ MY+KCG +E A ++FD+M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI-GKA 260
           RDLVSW  + +  A+NG    +L L+  M E G R +  T+ +   A       R+ G  
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 261 VHGYAMRAGF-DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
           V G+ ++ GF  + V+V  AL+DM+A+ G +  A+ VFDG+  R  V W  +I  YV+ G
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              + + +F  MLD G EP   ++   + AC +LG +  G  +H +  +L L +D  ++ 
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 380 SLISMYSKCK---KVDRAADIFSKLQGKTLVSWNAMILGYAQNG-RVNEALNYFCKMRSK 435
            L+ MY+K K    ++ A  +F  +    ++SW A+I GY Q+G + N  +  F +M ++
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           +I+P+  T  +++ A A LS     + IHA V+++       V  AL+ MYA+ G +  A
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R  FD + E ++ + +  ++    +    + +E    M +G +     TF   +SA +  
Sbjct: 406 RKAFDQLYETNILSMSPDVETERNNASCSSKIE---GMDDGVST---FTFASLLSAAASV 459

Query: 556 GLVEEG--IHYFT---SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           GL+ +G  +H  +     + D GI        ++V +  R G L +A     +M
Sbjct: 460 GLLTKGQKLHALSMKAGFRSDQGIS------NSLVSMYARCGYLEDACRAFDEM 507



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L + +++  L +K+G          LVS++ +   L DA R F+ + D     + +++ G
Sbjct: 462 LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISG 521

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE-IHGQLIVNGFSL 171
            AK      A+S    M    V P    Y  +L  C  VG ++ GKE        +G   
Sbjct: 522 LAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLP 581

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAEL 222
            +     +V++ A+ G +EEA +  + MP + D + W T+++     G  E+
Sbjct: 582 RMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEI 633


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/711 (35%), Positives = 403/711 (56%), Gaps = 45/711 (6%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ---IEEAYKMFDRMP 200
           LL+ C      ++G +IH Q IVNG    +F+++ +++ ++  G    ++ +  +F ++ 
Sbjct: 15  LLESCKS---FKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG-RRGDFITIVSILPAVANVGSLRIGK 259
             +L  WNT++ G++++     A+ L   M  +G    +  T   +L + A + SL  G 
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH + ++ GF+S + V  AL+ +Y+  G +  AR +FD    R++VS+N+MI  Y E  
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH---------------- 363
            PE A+ +F +M + G+ P   T +     C+ L +   G  +H                
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251

Query: 364 ------------------KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
                             ++   +      +  +S++  Y++C +++ A  +F+ +  + 
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-H 464
           ++SW AMI GY+Q G+ +EAL  F +M +  IKPD  T+V+V+ A A L      K + H
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT--TWNVMIDGYGTHGL 522
             +    F +N  +  A++DMYAKCG++ +A  +F  + +   T   +N MI G   HGL
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGL 431

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A+ +F +++    KP+++TF+  + AC HSGL+EEG   F S+   YGI+P M+HYG
Sbjct: 432 GETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYG 491

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGR G L EA+D +QKMP E    ++ A+L AC+ H NV++GE A  +L E++  
Sbjct: 492 CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 551

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
            G  +VLL+NI A A+ W++  +VR +ME  G++K PG S +EL   +H F +    HPQ
Sbjct: 552 HGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQ 611

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
            K I   L+ +   +K+AGYVP+T  +  D+++  +E+++S HSEKLA+AFGL+  SP  
Sbjct: 612 GKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTD 671

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TI I KNLR+C DCH A K +S + GREI VRD  RFH F+NG CSC D+W
Sbjct: 672 TIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 258/546 (47%), Gaps = 52/546 (9%)

Query: 38  IYRHPSAL-LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS---LSDAAR 93
           +  +PS+L LLE C S K+  +I    I +GL  Q    ++L+S F    S   L  +  
Sbjct: 6   LLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRL 65

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV-YNYTYLLKVCGDVG 152
           +F  I      +++TM++GY++  +  +A+   + M    +AP   + + +LL  C  + 
Sbjct: 66  LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  G E+H  +I +GF  DLF    ++++Y+  G +  A  +FD    RDLVS+NT++ 
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIK 185

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG--YAMRAGF 270
           G+A+    E AL L   M   G   D  T V++    + +    +GK +H   Y      
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245

Query: 271 DSIVNVSTALVDMYAK--------------------------------CGRVETARLVFD 298
           DS + + +A+VDMYAK                                CG +  AR +F+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+V+SW +MI+ Y + G   EA+ +F++M   G++P  VT++  L ACA LG  + 
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365

Query: 359 GI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAMILG 415
           G    H+ ++      +  +T +++ MY+KC  +D A +IF ++    KT   +N+MI G
Sbjct: 366 GKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAG 425

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-----HALVIRS 470
            AQ+G    A+  F ++ S  +KPD  T V V+ A     +I   K +     +A  I+ 
Sbjct: 426 LAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKP 485

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVEL 529
             E        ++D+  + G +  A  L   M  E +   W  ++    THG  K     
Sbjct: 486 QMEH----YGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 541

Query: 530 FNKMLE 535
             K+LE
Sbjct: 542 GQKLLE 547


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/716 (34%), Positives = 414/716 (57%), Gaps = 1/716 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++++ K   L+ A R+F+ +P++    + T+++ +A+    + A +   R+R++     
Sbjct: 102 LLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVN 161

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  T +LK+   +        +H      G   + F  +G+++ Y+ C  + +A  +F+
Sbjct: 162 QFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +  +D V W  +V+ +++N   E A  + ++M   G + +   + S+L A   + S+ +
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +HG A++   D+  +V  AL+DMYAKCG ++ ARL F+ +   +V+  + MI+ Y +
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               E+A  +F +++   V P   ++   L AC ++  L+ G  +H    ++   +D+ +
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L+  Y+KC  +D +  IFS L+    VSWN +++G++Q+G   EAL+ FC+M++  +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
                T  SV+ A A  + IR+A  IH  + +S F  +  +  +LID YAKCG +  A  
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 521

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  + ER + +WN +I GY  HG    A+ELF++M +   + NDITF+  +S CS +GL
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V  G+  F S++ D+GI+P M+HY  +V LLGRAGRLN+A  FI  +P  P   V+ A+L
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C IHKNV LG  +A ++ E++P +   +VLL+N+YAAA   D++A +R  M   G++K
Sbjct: 642 SSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 701

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S VE+K E+H+F  GS  HP  + I   LE L  +    GY+PD N + HDV+   
Sbjct: 702 VPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQ 761

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           +  +L  HSE+LA+A+GL+ + PG  I I KNLR C DCH A   IS +  REIIV
Sbjct: 762 KTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 238/482 (49%), Gaps = 6/482 (1%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           L+ C   G+ R G+ +HG ++  G    LDLF    ++NMY K G +  A ++FDRMPER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++VS+ T+V   AQ G  E A  L  R+  EG   +   + ++L     + +  +   VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             A + G D    V + L+D Y+ C  V  A  VF+G+  ++ V W +M++ Y E   PE
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
            A R+F KM   G +P    +   L A   L  +  G  +H    +    T+  +  +L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MY+KC  +  A   F  +    ++  + MI  YAQ+ +  +A   F ++   ++ P+ +
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ SV+ A   +  + + K IH   I+   E ++FV  AL+D YAKC  + ++  +F  +
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
            + +  +WN ++ G+   GLG+ A+ +F +M         +T+   + AC+ +  +    
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485

Query: 563 HYFTSLKKD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
               S++K  +  + V+ +  +++D   + G + +A    Q + +E  I  + A++    
Sbjct: 486 QIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYA 542

Query: 622 IH 623
           +H
Sbjct: 543 LH 544



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 6/175 (3%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYN 86
           Q A +P     + S  +L  C S   +R   +I   I KS   +  +    L+  + K  
Sbjct: 457 QAAQMPCTQVTYSS--VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCG 514

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
            + DA +VF+ + ++    ++ ++ GYA      DA+    RM   +V      +  LL 
Sbjct: 515 YIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 574

Query: 147 VCGDVGEIRRGKEIHGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           VC   G +  G  +   + I +G    +   T +V +  + G++ +A +    +P
Sbjct: 575 VCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP 629


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/740 (34%), Positives = 402/740 (54%), Gaps = 8/740 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S   K+  LS A  +F+ + ++    +  ++ GY +     +A      MR   + P 
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEP- 138

Query: 138 VYNYTYLLKVCGDVGEIRRGK---EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
             +Y  L+ +    GE+       +IH  +I  G+  +L     +V+ Y K   +  A +
Sbjct: 139 --DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F  M  +D V++N+++ G++  G  E A++L   +H  G +    T  ++L A   +  
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            + G+ VHG+ ++  F   V V  AL+D Y+K  +V+    +F  M   + +S+N +I +
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITS 316

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  +E+  +F+K+     +         L       +L  G  +H     +    +
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             + N+L+ MY+KC     A  IF  +  K+ V W AMI  Y Q G+  E +N F  MR 
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             +  D  T  S++ A A L+ I   + +H+L+IRS F  NV+  +AL+D YAKCG +  
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A   F  M ER+  +WN +I  Y  +G     +  F +M++   KP+ ++FL  +SACSH
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            G VEE + +F S+ + Y + P  +HY +MVD+L R GR +EA   + +MP EP   ++ 
Sbjct: 557 CGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616

Query: 615 AMLGACKIHKNVELGEKAANRLFEL-DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           ++L +C+IHKN EL +KAA+RLF + D  +   ++ ++NIYA A  WD +AKV+  M  +
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
           G++K P  S VE+K++ H F +    HP+ K+I   +  L  E++  GY PDT  ++HDV
Sbjct: 677 GVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDV 736

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++ ++   L  HSE+ AIAF L+N+  GS I + KNLR C DCH A K IS +  REIIV
Sbjct: 737 DEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIV 796

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+GVCSCGDYW
Sbjct: 797 RDSSRFHHFKDGVCSCGDYW 816



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 226/501 (45%), Gaps = 37/501 (7%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP------------------- 200
           I   ++  GF+ +       VN + + G +  A+++FD+MP                   
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 201 ------------ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                       ER  VSW  ++ G+ Q+  ++ A  L   M   G   D++T+V++L  
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
              + +  +   +H + ++ G++  + V  +LVD Y K   +  A  +F  M +++ V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           NS++  Y   G  EEA+ +F ++ + G++P++ T    L A   L D + G  VH  + +
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V + N+L+  YSK  +VD    +F ++     +S+N +I  YA NG+  E+ + 
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDL 329

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH--ALVIRSCFEKNVFVMTALIDMY 486
           F K++        F   +++        +R  + IH  A+ + + FE    V  AL+DMY
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMY 387

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AKC     A+ +FD +  +    W  MI  Y   G  +  + +F+ M       +  TF 
Sbjct: 388 AKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFA 447

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + AC++   +  G    + L +  G    +    A++D   + G + +A     +MP 
Sbjct: 448 SILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506

Query: 607 EPGITVFGAMLGACKIHKNVE 627
              ++ + A++ A   + NV+
Sbjct: 507 RNSVS-WNALISAYAQNGNVD 526



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 231/549 (42%), Gaps = 91/549 (16%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV-------- 305
           SL     +  + ++ GF+     S   V+ + + G +  A  VFD M ++N         
Sbjct: 23  SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82

Query: 306 -----------------------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
                                  VSW  +I  Y++    +EA R++  M   G+EP  VT
Sbjct: 83  GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142

Query: 343 IMEALHACADLGDLE-RGIFVHKLLDQLKLGTDVSMT--NSLISMYSKCKKVDRAADIFS 399
           ++  L   +  G+LE + + V      +KLG + ++   NSL+  Y K   +  A+ +F 
Sbjct: 143 LVTLL---SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +  K  V++N+++ GY+  G   EA+  F ++ +  IKP  FT  +++ A   L   ++
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + +H  V+++ F  NVFV  AL+D Y+K   V     LF  M E    ++NV+I  Y  
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
           +G  K + +LF K+           F   +S  + S  +  G   +  ++      E  +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379

Query: 579 DHYGAMVDLLGRAGRLNEA--------------WD-----FIQKMPIEPGITVFGAM--- 616
           ++  A+VD+  +     EA              W      ++QK   E GI VF  M   
Sbjct: 380 EN--ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 617 ------------LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
                       L AC    ++ LG +  + L        G+   ++N+Y+ +++ D  A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLI-----RSGF---MSNVYSGSALLDTYA 489

Query: 665 KVRTIMEK-KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           K   + +  K   + P       +N V S+ +  + + Q+  +   L +    I+ +GY 
Sbjct: 490 KCGCMTDAIKSFGEMPE------RNSV-SWNALISAYAQNGNVDGTLNSFQQMIQ-SGYK 541

Query: 724 PDTNSIHDV 732
           PD+ S   V
Sbjct: 542 PDSVSFLSV 550



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 148/298 (49%), Gaps = 7/298 (2%)

Query: 42  PSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A LL + TS   L+  R+I    I  G   +   +  LV ++ K N   +A ++F+ I
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             K    +  M+  Y +    ++ ++    MR   V      +  +L+ C ++  I  G+
Sbjct: 404 ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGR 463

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +GF  ++++ + +++ YAKCG + +A K F  MPER+ VSWN +++ +AQNG
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS- 277
             +  L+   +M + G + D ++ +S+L A ++ G +      H  +M   ++       
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEA-LWHFNSMTQIYEVTPKREH 582

Query: 278 -TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            T++VD+  + GR + A  +   M    + + W+S++ +     N E A +   ++ +
Sbjct: 583 YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFN 640


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/800 (34%), Positives = 436/800 (54%), Gaps = 39/800 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGL-------CDQHLFQTKLVSLFCKYNSLSDAAR 93
           A LL+ C  L +L   +R+   I +SGL                LV ++ K     +A R
Sbjct: 18  ARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQR 77

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
            F+ I  K    + ++L  Y        A+    +M    V P    +   L VCG +  
Sbjct: 78  AFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKR 137

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +  G  IH Q+       DL     +V+MY KCG+++ A ++FD +  ++++SW  +V+ 
Sbjct: 138 LEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSV 197

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL-RIGKAVHGYAMRAGFDS 272
           FA+NG       L+  M  EG + D + ++++L   ++ G L       H Y + +G D 
Sbjct: 198 FAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDR 257

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRN---VVSWNSMIAAYVEGGNPEEAMRIFQ 329
              V+TAL+ M+A+CGRV+ AR +F+ +   +   +  WN+MI AY   G  +EA+ +  
Sbjct: 258 EAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLD 317

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            +  QGV+P  +T + +L AC+ L D   G  +H L+D+     +VS+ N+L++MY +C 
Sbjct: 318 SLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGRCG 374

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKPDSFTMVSVI 448
            +  +A +FS++  K L SWN+ I  +A +GR +E +    +MR +  ++P S T+V+ +
Sbjct: 375 SLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAM 434

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A   L+    +K +H        E    V   L+DMY K G V TAR +FD    R+VT
Sbjct: 435 SACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVT 494

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           TWN M   Y   G+ +  + L   M     +P+ +TF+  +S C HSGL+EE  + F ++
Sbjct: 495 TWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAM 554

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT--VFGAMLGACKIHKNV 626
           ++++GI+P   HY  ++DLL RAG L +A DFI ++ +    +  ++ A+LGAC+     
Sbjct: 555 RREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACR----- 609

Query: 627 ELGEKA---------ANRLFELDP----DEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            LG+ +         A  + +++P    D    HV LANI AA+  WD+   +R  M +K
Sbjct: 610 SLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEK 669

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           GL+K PG SL+ +KN +H F +G   HP+ + IY  L  L   +   GYV DT  + H+V
Sbjct: 670 GLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNV 729

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            +  + +LL  HSEKLA+AFG+L++ PGS++ I KNLR CGDCH A K IS + GREI+V
Sbjct: 730 GEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVV 789

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFH F+NG CSCGDYW
Sbjct: 790 RDSNRFHHFRNGSCSCGDYW 809



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 257/503 (51%), Gaps = 22/503 (4%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-------VVNMYAKCGQIEEA 192
           +Y  LLK CG +G++  GK +H Q+  +G  LD    +G       +V MY KCG+ +EA
Sbjct: 16  SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            + FD +  +++ SW +I+  +   G    AL+   +M + G   D +  ++ L     +
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
             L  G  +H        DS + +  ALV MY KCGR++ A+ +FD ++ +NV+SW  ++
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL-ERGIFVHKLLDQLKL 371
           + + E G   E   + + M  +G++P  V ++  L+ C+  G L E     H  +    L
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKL---QGKTLVSWNAMILGYAQNGRVNEALNY 428
             +  +  +L+SM+++C +VD+A +IF K+     + +  WNAMI  YA  G   EAL  
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
              ++ + +KP+  T +S   +L   S ++  + +H L+  S F++ V V  AL+ MY +
Sbjct: 316 LDSLQLQGVKPNCITFIS---SLGACSSLQDGRALHLLIDESGFDREVSVANALVTMYGR 372

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLC 547
           CG++  +  LF  M E+ + +WN  I  +  HG     ++L ++M  EG  +P+ +T + 
Sbjct: 373 CGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVT 432

Query: 548 AISACSHSGLVE-EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
           A+SAC   GL +           ++ G+E        +VD+ G+AG ++ A  +I    +
Sbjct: 433 AMSAC--GGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTA-RYIFDRAL 489

Query: 607 EPGITVFGAMLGA---CKIHKNV 626
              +T + AM GA   C + + V
Sbjct: 490 RRNVTTWNAMAGAYRQCGVTRGV 512


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/675 (35%), Positives = 394/675 (58%), Gaps = 8/675 (1%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           P   +  PS  L++ CTSL      L     +I  G        T L++ + K+     A
Sbjct: 45  PPDAHTFPS--LVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSA 102

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            +VF+ + D+    + TM+  Y +    D A S    MR   + P   +   +L +   V
Sbjct: 103 RKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQP---SSVTMLGLLSGV 159

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E+   + +H  +I  GF  D+     ++N+Y KCG++E+A  +F+ M  RD++SWN++V
Sbjct: 160 LELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLV 219

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +G+AQ G     L L+ RM  +G   D  T  S++ A A    L +GK VHG+ +RAG +
Sbjct: 220 SGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLE 279

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
              ++ T+L+ MY KCG V +A  +F+GM  ++V+SW +MI+  V+    + A+ +F++M
Sbjct: 280 QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRM 339

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
           L   V P+  TI   L ACA+LG    G  VH  + + ++  D+   NSL++MY+KC  +
Sbjct: 340 LKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHL 399

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +++  +F ++  + +VSWNA++ G+AQNG + +AL  F +MR    +PDS T+VS++ A 
Sbjct: 400 EQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQAC 459

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A +  +   KWIH  V +SC    + + TAL+DMY+KCG +G+A+  FD M ++ + +W+
Sbjct: 460 ASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWS 519

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            +I GYG+HG G+ A+ +++  L    +PN + +L  +SACSH+GLV++G+ +F S+ KD
Sbjct: 520 SIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKD 579

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           +GIEP ++H   +VDLL RAGR+ EA+ F ++M  +P + V G +L AC+   NVELG+ 
Sbjct: 580 FGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDI 639

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
            A  +  L P   G +V LA+ YA+   WD + +V T M+   L+K PG S +EL   + 
Sbjct: 640 VAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTIT 699

Query: 692 SFYSGSTKHPQSKRI 706
           +F++  + HPQ + I
Sbjct: 700 TFFTDHSSHPQFEEI 714



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 263/502 (52%), Gaps = 8/502 (1%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           Y+ ++   +   +  D +     M   D  P  + +  L+K C  +     G   H ++I
Sbjct: 16  YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V+G+S D +  T ++N Y+K G  + A K+FD M +R++V W T++  + + G  ++A  
Sbjct: 76  VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M  +G +   +T++ +L  V  +  L   + +H   ++ GF S V ++ +++++Y 
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCGRVE A+ +F+ M +R+V+SWNS+++ Y + GN  E +++  +M   G+EP   T   
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            + A A    L  G  VH  + +  L  D  +  SLI MY KC  V+ A  IF  +  K 
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKD 312

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           ++SW AMI G  QN   + A+  F +M    + P + T+ SV+ A AEL        +H 
Sbjct: 313 VISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHG 372

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            ++R   + ++    +L+ MYAKCG +  + ++FD M+ R + +WN ++ G+  +G    
Sbjct: 373 YILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGA 583
           A+ LFN+M +   +P+ IT +  + AC+  G + +G  IH F + K   G   ++D   A
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVT-KSCLGPCILID--TA 489

Query: 584 MVDLLGRAGRLNEAWDFIQKMP 605
           +VD+  + G L  A     +MP
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMP 511



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 14/303 (4%)

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           S+N++I      G   + +  +  ML     P   T    + AC  L     G+  H+ +
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
                 +D  +  SLI+ YSK      A  +F  +  + +V W  MI  Y + G  + A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + +  MR + I+P S TM+ ++  + EL    + + +HA VI+  F  +V +  +++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELV---HLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            KCG V  A+ALF++M+ R V +WN ++ GY   G  +  ++L  +M     +P+  TF 
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 547 CAISACSHS-----GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             +SA +       G +  G      L++D  IE       +++ +  + G +N A+   
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET------SLIGMYLKCGNVNSAFRIF 305

Query: 602 QKM 604
           + M
Sbjct: 306 EGM 308



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 30/253 (11%)

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           S+NA+I   +  G   + L  +  M S +  PD+ T  S++ A   L +  +    H  V
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           I   +  + ++ T+LI+ Y+K G   +AR +FD M++R+V  W  MI  Y   G    A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 528 ELFNKMLEGPTKPNDITFLCAISA--------CSHSGLVEEGIHYFTSLKKDY------- 572
            ++N M     +P+ +T L  +S         C H+ +++ G     +L           
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194

Query: 573 -------GIEPVMD-----HYGAMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAML 617
                   +  +MD      + ++V    + G + E    + +M    IEP    FG+++
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254

Query: 618 GACKIHKNVELGE 630
            A  +   + +G+
Sbjct: 255 SAAAMQSKLGVGK 267


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/719 (37%), Positives = 403/719 (56%), Gaps = 44/719 (6%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLI----------VNGFSL------------- 171
           + +++N+   LK C    ++R GK +H   I           N F L             
Sbjct: 5   SSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARR 64

Query: 172 --------DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
                   ++F+   +++ YAK   +E A+++FD MP+ D VS+NT++A +A+ G  + A
Sbjct: 65  VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPA 124

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
             L   M E     D  T+  I+ A   NVG +R    +H  ++  G DS V+V  AL+ 
Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITACGINVGLIR---QLHALSVVTGLDSYVSVGNALIT 181

Query: 283 MYAKCGRVETARLVFDGM-KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            Y+K G ++ AR +F  + + R+ VSWNSM+ AY++     +A+ ++ +M  +G+     
Sbjct: 182 SYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIF 241

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSK 400
           T+   L A  ++ DL  G+  H  L +     +  + + LI +YSKC   +     +F +
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDE 301

Query: 401 LQGKTLVSWNAMILGYA-QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           +    LV WN MI GY+      +EAL  F +++    +PD  ++V VI A + +S    
Sbjct: 302 ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQ 361

Query: 460 AKWIHALVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
            + +H L ++     N + V  ALI MY+KCG +  A+ LFD M E +  ++N MI GY 
Sbjct: 362 GRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYA 421

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG+G  ++ LF +MLE    P +ITF+  ++AC+H+G VE+G  YF  +K+ +GIEP  
Sbjct: 422 QHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEA 481

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            H+  M+DLLGRAG+L+EA   I+ +P +PG   + A+LGAC+IH NVEL  KAANRL +
Sbjct: 482 GHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ 541

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP     +V+LANIY+        A VR +M  +G++K PGCS +E+   +H F +  T
Sbjct: 542 LDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDT 601

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-----HDVEDYVQENLLSSHSEKLAIAFG 753
            HP  K+I  +LE ++ +IK  GY P+  S        V    +E  L  HSEKLA++FG
Sbjct: 602 FHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFG 661

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+++  G  I + KNLR+C DCHNA KYIS V  REI VRD HRFHCFK+G CSCG YW
Sbjct: 662 LMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 259/518 (50%), Gaps = 15/518 (2%)

Query: 26  HTLSQRAYIPSRIYRHPSALLL-EVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           H L  ++++P+  Y     LLL   C  L   RR+      +  C+   F T L+S + K
Sbjct: 31  HALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD---HTHDCNVFSFNT-LISAYAK 86

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
            + +  A ++F+ +P      Y+T++  YA+      A    + MR   +    +  + +
Sbjct: 87  ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGI 146

Query: 145 LKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-R 202
           +  CG +VG IR   ++H   +V G    +     ++  Y+K G ++EA ++F  + E R
Sbjct: 147 ITACGINVGLIR---QLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D VSWN++V  + Q+     AL+L   M   G   D  T+ S+L A  NV  L  G   H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGR-VETARLVFDGMKSRNVVSWNSMIAAY-VEGGN 320
              +++G+    +V + L+D+Y+KCG  +   R VFD + + ++V WN+MI+ Y +    
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTN 379
            +EA+  F+++   G  P + +++  + AC+++    +G  VH L  +L + ++ +S+ N
Sbjct: 324 SDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNN 383

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LI+MYSKC  +  A  +F  +     VS+N+MI GYAQ+G   ++L+ F +M      P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTP 443

Query: 440 DSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            + T +SV+ A A    +   K + + +  +   E      + +ID+  + G +  A  L
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503

Query: 499 FDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            + +  +     W+ ++     HG  + A++  N++L+
Sbjct: 504 IETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ 541


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/712 (36%), Positives = 399/712 (56%), Gaps = 53/712 (7%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ +ML+ Y+        V    +M+   V P  + Y  L+K  G       G   H  +
Sbjct: 67  VFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-----GGIGFHAHV 121

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAEL 222
           +  G   D F    V++MYA+ G I  A K+FD +P  ER +  WN +V+G+        
Sbjct: 122 LKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY-------- 173

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
                 +   EG+      +  ++P                       +  V   TA+V 
Sbjct: 174 -----WKWESEGQAQ---WLFDVMP-----------------------ERNVITWTAMVT 202

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            YAK   +E AR  FD M  R+VVSWN+M++ Y + G  EEA+R+F +M++ G+EP   T
Sbjct: 203 GYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETT 262

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  + AC+  GD      + + L Q ++  +  +  +L+ MY+K   +D A  +F+ + 
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMP 322

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           G+ +V+WN+MI GYAQNG+   A+  F +M  +K + PD  TMVSVI A   L  +    
Sbjct: 323 GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGN 382

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           W+   +  +  + ++    A+I MY++CG++  A+ +F  M  R V ++N +I G+  HG
Sbjct: 383 WVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHG 442

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  A+ L + M EG  +P+ +TF+  ++ACSH+GL+EEG   F S+K     +P +DHY
Sbjct: 443 HGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHY 497

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             MVDLLGR G L +A   +++MP+EP   V+G++L A +IHK VELGE AAN+LFEL+P
Sbjct: 498 ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEP 557

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           D  G  +LL+NIYA+A  W  + ++R  M+K G++KT G S VE   ++H F      H 
Sbjct: 558 DNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHE 617

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +S  IY  L  L  +++ AGY+ D + +  DVE+  +E ++ +HSEKLAI + LL S  G
Sbjct: 618 RSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAG 677

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I + KNLRVC DCH A K IS + GR IIVRD +RFHCF +G+CSC DYW
Sbjct: 678 AVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 237/499 (47%), Gaps = 54/499 (10%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD--KLDALYHTMLKGYAKFASLD 120
           ++K G       +  ++ ++ +   +  A +VF+ IPD  +  A ++ M+ GY K+ S  
Sbjct: 121 VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEG 180

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            A          DV P                                   ++   T +V
Sbjct: 181 QAQWLF------DVMP---------------------------------ERNVITWTAMV 201

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
             YAK   +E A + FD MPER +VSWN +++G+AQNG AE AL L   M   G   D  
Sbjct: 202 TGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDET 261

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T V+++ A ++ G   +  ++     +        V TAL+DMYAK G +++AR +F+ M
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTM 321

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERG 359
             RNVV+WNSMIA Y + G    A+ +F++M+  + + P  VT++  + AC  LG LE G
Sbjct: 322 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 381

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
            +V + L + ++   +S  N++I MYS+C  ++ A  +F ++  + +VS+N +I G+A +
Sbjct: 382 NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAH 441

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   EA+N    M+   I+PD  T + V+ A +   ++   +     V  S  +  +   
Sbjct: 442 GHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR----KVFESIKDPAIDHY 497

Query: 480 TALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLE 535
             ++D+  + G +  A R +  M  E H   +  +++    H    LG+ A    NK+ E
Sbjct: 498 ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAA---NKLFE 554

Query: 536 -GPTKPNDITFLCAISACS 553
             P    +   L  I A +
Sbjct: 555 LEPDNSGNFILLSNIYASA 573



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 79/379 (20%)

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           L+F+   + NV  + SM+  Y    +  + + ++++M   GV P +  +   L   A  G
Sbjct: 55  LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRP-DAFVYPILIKSAGTG 113

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG----------- 403
               GI  H  + +L  G+D  + N++I MY++   +  A  +F ++             
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 404 ----------------------KTLVSWNAMILGYAQNGRVNEALNYF-C---------- 430
                                 + +++W AM+ GYA+   +  A  YF C          
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229

Query: 431 --------------------KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
                               +M +  I+PD  T V+VI A +     R    + A ++R+
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS----RGDPCLAASLVRT 285

Query: 471 CFEK----NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
             +K    N FV TAL+DMYAK G + +AR LF+ M  R+V TWN MI GY  +G    A
Sbjct: 286 LHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA 345

Query: 527 VELFNKMLEGPT-KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           +ELF +M+      P+++T +  ISAC H G +E G ++      +  I+  +  + AM+
Sbjct: 346 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNAMI 404

Query: 586 DLLGRAGRLNEAWDFIQKM 604
            +  R G + +A    Q+M
Sbjct: 405 FMYSRCGSMEDAKRVFQEM 423


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/615 (39%), Positives = 376/615 (61%), Gaps = 11/615 (1%)

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           +S N ++    + G  + A+ ++++     ++    T   ++    +  SL     VH +
Sbjct: 47  ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQ----TYELLILCCGHRSSLSDALRVHRH 102

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +  G D    ++T L+ MY+  G V+ AR VFD  + R +  WN++  A    G+ EE 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACA----DLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           + ++ KM   GVE    T    L AC      +  L +G  +H  L +    + V +  +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIK 438
           L+ MY++   VD A+ +F  +  + +VSW+AMI  YA+NG+  EAL  F +M   +K+  
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+S TMVSV+ A A L+ +   K IH  ++R   +  + V++AL+ MY +CG +   + +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M++R V +WN +I  YG HG GK A+++F +ML     P  +TF+  + ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           EEG   F ++ +D+GI+P ++HY  MVDLLGRA RL+EA   +Q M  EPG  V+G++LG
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           +C+IH NVEL E+A+ RLF L+P   G +VLLA+IYA A MWD++ +V+ ++E +GLQK 
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PG   +E++ +++SF S    +P  ++I+ FL  L +++K  GY+P T  + +++E   +
Sbjct: 523 PGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           E ++  HSEKLA+AFGL+N+S G  I I KNLR+C DCH  TK+IS    +EI+VRD++R
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNR 642

Query: 798 FHCFKNGVCSCGDYW 812
           FH FKNGVCSCGDYW
Sbjct: 643 FHRFKNGVCSCGDYW 657



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 199/403 (49%), Gaps = 8/403 (1%)

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
           IR+   + +P    Y  L+  CG    +     +H  ++ NG   D F  T ++ MY+  
Sbjct: 66  IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G ++ A K+FD+  +R +  WN +       G  E  L L  +M+  G   D  T   +L
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185

Query: 247 PAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            A       V  L  GK +H +  R G+ S V + T LVDMYA+ G V+ A  VF GM  
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGI 360
           RNVVSW++MIA Y + G   EA+R F++M+ +  +  P +VT++  L ACA L  LE+G 
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +  L + + + ++L++MY +C K++    +F ++  + +VSWN++I  Y  +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVM 479
              +A+  F +M +    P   T VSV+ A +   ++   K +   + R    +  +   
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425

Query: 480 TALIDMYAKCGAVG-TARALFDMMNERHVTTWNVMIDGYGTHG 521
             ++D+  +   +   A+ + DM  E     W  ++     HG
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 206/386 (53%), Gaps = 16/386 (4%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           LSQ +    + Y     LL+  C   +SL +  R+   I+ +G        TKL+ ++  
Sbjct: 69  LSQESSPSQQTYE----LLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD 124

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
             S+  A +VF+    +   +++ + +        ++ +    +M    V    + YTY+
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184

Query: 145 LKVC----GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LK C      V  + +GKEIH  L   G+S  ++ MT +V+MYA+ G ++ A  +F  MP
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG--DFITIVSILPAVANVGSLRIG 258
            R++VSW+ ++A +A+NG A  AL     M  E +    + +T+VS+L A A++ +L  G
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K +HGY +R G DSI+ V +ALV MY +CG++E  + VFD M  R+VVSWNS+I++Y   
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTDVS 376
           G  ++A++IF++ML  G  PT VT +  L AC+  G +E G  +F     D   +   + 
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH-GIKPQIE 423

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQ 402
               ++ +  +  ++D AA +   ++
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMR 449



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 9/300 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           + + G        T LV ++ ++  +  A+ VF  +P +    +  M+  YAK     +A
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267

Query: 123 V-SFLIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           + +F   MR   D +P       +L+ C  +  + +GK IHG ++  G    L  ++ +V
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALV 327

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY +CG++E   ++FDRM +RD+VSWN++++ +  +G+ + A+ +   M   G     +
Sbjct: 328 TMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMR-AGFDSIVNVSTALVDMYAKCGRV-ETARLVFD 298
           T VS+L A ++ G +  GK +     R  G    +     +VD+  +  R+ E A++V D
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---TIMEALHACADLGD 355
                    W S++ +    GN E A R  +++    +EP N     ++  ++A A + D
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLADIYAEAQMWD 505


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/740 (34%), Positives = 402/740 (54%), Gaps = 8/740 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S   K+  LS A  +F+ + ++    +  ++ GY +     +A      MR   + P 
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEP- 138

Query: 138 VYNYTYLLKVCGDVGEIRRGK---EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
             +Y  L+ +    GE+       +IH  +I  G+  +L     +V+ Y K   +  A +
Sbjct: 139 --DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F  M  +D V++N+++ G++  G  E A++L   +H  G +    T  ++L A   +  
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            + G+ VHG+ ++  F   V V  AL+D Y+K  +V+    +F  M   + +S+N +I +
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITS 316

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  +E+  +F+K+     +         L       +L  G  +H     +    +
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             + N+L+ MY+KC     A  IF  +  K+ V W AMI  Y Q G+  E +N F  MR 
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             +  D  T  S++ A A L+ I   + +H+L+IRS F  NV+  +AL+D YAKCG +  
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A   F  M ER+  +WN +I  Y  +G     +  F +M++   KP+ ++FL  +SACSH
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            G VEE + +F S+ + Y + P  +HY +MVD+L R GR +EA   + +MP EP   ++ 
Sbjct: 557 CGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616

Query: 615 AMLGACKIHKNVELGEKAANRLFEL-DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           ++L +C+IHKN EL +KAA+RLF + D  +   ++ ++NIYA A  WD +AKV+  M  +
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDV 732
           G++K P  S VE+K++ H F +    HP+ K+I   +  L  E++  GY PDT  ++HDV
Sbjct: 677 GVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDV 736

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++ ++   L  HSE+ AIAF L+N+  GS I + KNLR C DCH A K IS +  REIIV
Sbjct: 737 DEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIV 796

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+GVCSCGDYW
Sbjct: 797 RDSSRFHHFKDGVCSCGDYW 816



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 226/501 (45%), Gaps = 37/501 (7%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP------------------- 200
           I   ++  GF+ +       VN + + G +  A+++FD+MP                   
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 201 ------------ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                       ER  VSW  ++ G+ Q+  ++ A  L   M   G   D++T+V++L  
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
              + +  +   +H + ++ G++  + V  +LVD Y K   +  A  +F  M +++ V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           NS++  Y   G  EEA+ +F ++ + G++P++ T    L A   L D + G  VH  + +
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V + N+L+  YSK  +VD    +F ++     +S+N +I  YA NG+  E+ + 
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDL 329

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH--ALVIRSCFEKNVFVMTALIDMY 486
           F K++        F   +++        +R  + IH  A+ + + FE    V  AL+DMY
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMY 387

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           AKC     A+ +FD +  +    W  MI  Y   G  +  + +F+ M       +  TF 
Sbjct: 388 AKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFA 447

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + AC++   +  G    + L +  G    +    A++D   + G + +A     +MP 
Sbjct: 448 SILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506

Query: 607 EPGITVFGAMLGACKIHKNVE 627
              ++ + A++ A   + NV+
Sbjct: 507 RNSVS-WNALISAYAQNGNVD 526



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 231/549 (42%), Gaps = 91/549 (16%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV-------- 305
           SL     +  + ++ GF+     S   V+ + + G +  A  VFD M ++N         
Sbjct: 23  SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82

Query: 306 -----------------------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
                                  VSW  +I  Y++    +EA R++  M   G+EP  VT
Sbjct: 83  GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142

Query: 343 IMEALHACADLGDLE-RGIFVHKLLDQLKLGTDVSMT--NSLISMYSKCKKVDRAADIFS 399
           ++  L   +  G+LE + + V      +KLG + ++   NSL+  Y K   +  A+ +F 
Sbjct: 143 LVTLL---SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +  K  V++N+++ GY+  G   EA+  F ++ +  IKP  FT  +++ A   L   ++
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + +H  V+++ F  NVFV  AL+D Y+K   V     LF  M E    ++NV+I  Y  
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
           +G  K + +LF K+           F   +S  + S  +  G   +  ++      E  +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379

Query: 579 DHYGAMVDLLGRAGRLNEA--------------WD-----FIQKMPIEPGITVFGAM--- 616
           ++  A+VD+  +     EA              W      ++QK   E GI VF  M   
Sbjct: 380 EN--ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 617 ------------LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
                       L AC    ++ LG +  + L        G+   ++N+Y+ +++ D  A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLI-----RSGF---MSNVYSGSALLDTYA 489

Query: 665 KVRTIMEK-KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           K   + +  K   + P       +N V S+ +  + + Q+  +   L +    I+ +GY 
Sbjct: 490 KCGCMTDAIKSFGEMPE------RNSV-SWNALISAYAQNGNVDGTLNSFQQMIQ-SGYK 541

Query: 724 PDTNSIHDV 732
           PD+ S   V
Sbjct: 542 PDSVSFLSV 550



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 148/298 (49%), Gaps = 7/298 (2%)

Query: 42  PSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A LL + TS   L+  R+I    I  G   +   +  LV ++ K N   +A ++F+ I
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             K    +  M+  Y +    ++ ++    MR   V      +  +L+ C ++  I  G+
Sbjct: 404 ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGR 463

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +GF  ++++ + +++ YAKCG + +A K F  MPER+ VSWN +++ +AQNG
Sbjct: 464 QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNG 523

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS- 277
             +  L+   +M + G + D ++ +S+L A ++ G +      H  +M   ++       
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEA-LWHFNSMTQIYEVTPKREH 582

Query: 278 -TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            T++VD+  + GR + A  +   M    + + W+S++ +     N E A +   ++ +
Sbjct: 583 YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFN 640


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/813 (33%), Positives = 428/813 (52%), Gaps = 80/813 (9%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            ++L++C +L EL     +   ++K G   D HL    L++L+ K   +  A +VF+  P
Sbjct: 135 TVVLKICLALMELWLGMEVHACLLKRGFQVDVHL-SCALINLYEKCLGIDRANQVFDETP 193

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + D L++T++    +    +DA+    RM+             LL+ CG +  +  GK+
Sbjct: 194 LQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQ 253

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IHG +I  G   +      +V+MY++  ++E A  +FD   + +L SWN+I++ +A NG 
Sbjct: 254 IHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGC 313

Query: 220 AELALDLVTRMHEEGRRGDFIT-----------------------------------IVS 244
              A DL   M     + D IT                                   I S
Sbjct: 314 LNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITS 373

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            L AV  +G   +GK +HGY MR+  +  V V T+LVDMY K   +E A +VF   K++N
Sbjct: 374 ALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKN 433

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           + +WNS+I+ Y   G  + A ++  +M ++G++                           
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIK--------------------------- 466

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGYAQNG 420
                    D+   NSL+S YS     + A  + ++++       +VSW AMI G  QN 
Sbjct: 467 --------ADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNE 518

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +AL +F +M+ +N+KP+S T+ +++ A A  S+++  + IH   ++  F  ++++ T
Sbjct: 519 NYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIAT 578

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           ALIDMY+K G +  A  +F  + E+ +  WN M+ GY  +G G+    LF+ M +   +P
Sbjct: 579 ALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRP 638

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + ITF   +S C +SGLV +G  YF S+K DY I P ++HY  MVDLLG+AG L+EA DF
Sbjct: 639 DAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDF 698

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I  MP +   +++GA+L AC++HK++++ E AA  LF L+P     +VL+ NIY+    W
Sbjct: 699 IHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERW 758

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             + +++  M   G++     S ++++  +H F +    HP+   IY  L  LI EIK  
Sbjct: 759 GDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKL 818

Query: 721 GYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYVPDTN +H +++D  +E +L SH+EKLA+ +GL+    G+ I + KN R+C DCH A 
Sbjct: 819 GYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAA 878

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KYISL   REI +RD  RFH F NG CSC D W
Sbjct: 879 KYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 251/556 (45%), Gaps = 76/556 (13%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYN 140
           + ++     A +VF     +   L+++ L+ +A F      +  + +  +D  V      
Sbjct: 74  YLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKA 133

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            T +LK+C  + E+  G E+H  L+  GF +D+     ++N+Y KC  I+ A ++FD  P
Sbjct: 134 LTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETP 193

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            ++   WNTIV    ++   E AL+L  RM     +    TIV +L A   + +L  GK 
Sbjct: 194 LQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQ 253

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HGY +R G  S  ++  ++V MY++  R+E AR VFD  +  N+ SWNS+I++Y   G 
Sbjct: 254 IHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGC 313

Query: 321 PEEAMRIFQKMLDQGVEP----------------------TNV-------------TIME 345
              A  +F++M    ++P                      TN+             +I  
Sbjct: 314 LNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITS 373

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           AL A  +LG    G  +H  + + KL  DV +  SL+ MY K   +++A  +F   + K 
Sbjct: 374 ALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKN 433

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           + +WN++I GY   G  + A     +M+ + IK D  T  S++   +             
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYS------------- 480

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
             +  C E+ +    A+I+     G               +V +W  MI G   +     
Sbjct: 481 --MSGCSEEAL----AVINRIKSLGLTP------------NVVSWTAMISGCCQNENYTD 522

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHY-- 581
           A++ F++M E   KPN  T    + AC+   L+++G  IH F S+K  +    V D Y  
Sbjct: 523 ALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCF-SMKHGF----VDDIYIA 577

Query: 582 GAMVDLLGRAGRLNEA 597
            A++D+  + G+L  A
Sbjct: 578 TALIDMYSKGGKLKVA 593



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 154/306 (50%), Gaps = 2/306 (0%)

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE-GGNPEEAMRIFQK 330
           ++V +  +++  Y + G  E+A  VF    +RN + WNS +  +   GG+  E + +F++
Sbjct: 62  NLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKE 121

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           + D+GV+  +  +   L  C  L +L  G+ VH  L +     DV ++ +LI++Y KC  
Sbjct: 122 LHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLG 181

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +DRA  +F +   +    WN +++   ++ R  +AL    +M+S + K    T+V ++ A
Sbjct: 182 IDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQA 241

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
             +L  +   K IH  VIR     N  +  +++ MY++   +  ARA+FD   + ++ +W
Sbjct: 242 CGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASW 301

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N +I  Y  +G    A +LF +M     KP+ IT+   +S     G  E  +    SL+ 
Sbjct: 302 NSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQS 361

Query: 571 DYGIEP 576
             G +P
Sbjct: 362 A-GFKP 366


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/581 (40%), Positives = 363/581 (62%), Gaps = 3/581 (0%)

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
           RR +  T V +L   A+  +L  GK VH   ++ G+ S   ++  L++MY KCG +  AR
Sbjct: 20  RREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEAR 79

Query: 295 LVFDGMKSRN--VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
            VFD ++ +N  V+SWN +I AY + G  +EA+ +F+ M  +GV    VT++ A+ ACA 
Sbjct: 80  SVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACAS 139

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           L   E G  VH +    +L +D  +  SL++M+ KCK VD A  +F  L  K LV+WN M
Sbjct: 140 LPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNM 199

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           +  Y+QN +  +A+  F  M  + ++PD+ T +++I A A L+     + +H  +  S  
Sbjct: 200 VAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGI 259

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             +V + TA++  Y KCG +  ARA+FD + +++  TW+ ++  Y  +G    A+EL+++
Sbjct: 260 PMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHE 319

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M++G  + N ITFL  + ACSH+G   +G+ YF S+ +D+G+ PV +HY  ++DLLGR+G
Sbjct: 320 MVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSG 379

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           +L  + D I  MP EP  + + A+LGAC++H +V+ G + A  ++ELDP++ G ++LL+N
Sbjct: 380 QLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSN 439

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           +Y++    D+  + R  M  +G+ K PG S +E+K+ VH F +    HPQ  RI+  +E 
Sbjct: 440 LYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIER 499

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L   +K AGYV D  ++  DVE+  +E LL  HSE+LAIAFGL+++ PG+ +HI KNLRV
Sbjct: 500 LKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRV 559

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           C DCH A K IS V GR+I+VRD  RFH F+NG CSCGDYW
Sbjct: 560 CFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 236/488 (48%), Gaps = 44/488 (9%)

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
           D+    +  Y  LLK C D   +  GK +H  L+ +G++ D      ++ MY KCG I E
Sbjct: 18  DERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAE 77

Query: 192 AYKMFDRMPER--DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           A  +FD++ E+  D++SWN I+  + QNG  + AL L   M  EG   + +T+++ + A 
Sbjct: 78  ARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDAC 137

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A++ S   G+ VH  A+    +S   V T+LV+M+ KC  V+ AR VFD +  +N+V+WN
Sbjct: 138 ASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWN 197

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M+A Y +    ++A+++F+ M  +GV+P  VT +  + ACA L     G  VH  +   
Sbjct: 198 NMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS 257

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            +  DV++  +++  Y KC ++D A  IF  L  K  V+W+A++  YAQNG   EA+  +
Sbjct: 258 GIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELY 317

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M    ++ +  T + ++ A +                RS    + FV      M    
Sbjct: 318 HEMVQGGLEVNGITFLGLLFACSHAG-------------RSMDGVDYFV-----SMIRDF 359

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G V       +            +ID  G  G  + + +L N M   P +P+   +L  +
Sbjct: 360 GVVPVFEHYLN------------LIDLLGRSGQLQLSEDLINSM---PYEPDSSAWLALL 404

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPV-MDHYGAMVDLLGRAGRLNEAWDFIQKMPI-- 606
            AC   G V+ G      +   Y ++P     Y  + +L    GR++EA    + M +  
Sbjct: 405 GACRMHGDVDRGARIAELI---YELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRG 461

Query: 607 ---EPGIT 611
              +PG++
Sbjct: 462 ITKQPGLS 469



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 209/437 (47%), Gaps = 47/437 (10%)

Query: 45  LLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LLL+ C   K L   +R+   ++K G     L    L+ ++ K   +++A  VF+ I +K
Sbjct: 29  LLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEK 88

Query: 102 -LDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK---VCGDVGEIRR 156
             D + ++ ++  Y +     +A+     M   D+  V+ N   L+     C  +     
Sbjct: 89  NADVISWNGIIGAYTQNGLGKEALHLFKTM---DLEGVIANQVTLINAIDACASLPSEEE 145

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G+ +H   +      D    T +VNM+ KC  ++ A  +FD +P ++LV+WN +VA ++Q
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N   + A+ +   M  EG + D +T ++I+ A A + +   G+ VH     +G    V +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TA++  Y KCGR++ AR +FD +  +N V+W++++AAY + G   EA+ ++ +M+  G+
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 337 EPTNVTIMEALHACADLGDLERGI--FVHKLLD---------------------QLKLGT 373
           E   +T +  L AC+  G    G+  FV  + D                     QL+L  
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385

Query: 374 DV--SM-----TNSLISMYSKCK---KVDRA---ADIFSKLQGKTLVSWNAMILGYAQNG 420
           D+  SM     +++ +++   C+    VDR    A++  +L  +    +  +   Y+  G
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTG 445

Query: 421 RVNEALNYFCKMRSKNI 437
           R++EA      MR + I
Sbjct: 446 RMDEARRTRKAMRLRGI 462


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/570 (41%), Positives = 347/570 (60%), Gaps = 2/570 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           + + A A   +L   + +HG+   + F+    +  +L+ +Y KCG V  A  VFD M+ +
Sbjct: 56  AFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKK 115

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++VSW S+IA Y +   P EA+ +   ML    +P   T    L A     D   G  +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIH 175

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C K+D A  +F KL  K  VSWNA+I G+A+ G   
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            AL  F +M+    +   FT  S+   LA +  +   KW+HA +++S  +   FV   ++
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTML 295

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +F+ +  + + TWN M+  +  +GLGK AV  F +M +     N I
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TFLC ++ACSH GLV+EG HYF  + K+Y +EP ++HY  +VDLLGRAG LN A  FI K
Sbjct: 356 TFLCILTACSHGGLVKEGKHYFDMI-KEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFK 414

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   V+GA+L AC++HKN ++G+ AA+ +F+LDPD+ G  VLL NIYA+   WD  
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAA 474

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE+ N VH F +    HP+++ IY   + +  +I+  GYV
Sbjct: 475 ARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYV 534

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PD + +   V++  +E  L  HSEK+A+AF L+    G+TI I KN+R+CGDCH+A KYI
Sbjct: 535 PDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S V  REI+VRD +RFH F NG CSCGDYW
Sbjct: 595 SKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 201/383 (52%), Gaps = 1/383 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y   +  C     +   ++IHG L  + F  D F    ++++Y KCG + EA
Sbjct: 46  ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           +K+FD+M ++D+VSW +++AG+AQN     A+ L+  M +   + +  T  S+L A    
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
               IG  +H  A++  +   V V +AL+DMYA+CG+++ A  VFD + S+N VSWN++I
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + +   G+ E A+ +F +M   G E T+ T        A +G LE+G +VH  + + +  
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + N+++ MY+K   +  A  +F ++  K LV+WN+M+  +AQ G   EA+++F +M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   I  +  T + ++ A +   +++  K    ++     E  +     ++D+  + G +
Sbjct: 346 RKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLL 405

Query: 493 GTARA-LFDMMNERHVTTWNVMI 514
             A   +F M  E     W  ++
Sbjct: 406 NYALVFIFKMPMEPTAAVWGALL 428



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 192/394 (48%), Gaps = 2/394 (0%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVS 80
           LH+  H  S       R+Y H          +L + R+I   +  S           L+ 
Sbjct: 36  LHDLDHLDSGELAPTPRVY-HAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIH 94

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           L+CK  S+ +A +VF+ +  K    + +++ GYA+     +A+  L  M      P  + 
Sbjct: 95  LYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFT 154

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LLK  G   +   G +IH   +   +  D++  + +++MYA+CG+++ A  +FD++ 
Sbjct: 155 FASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            ++ VSWN +++GFA+ G  E AL +   M   G      T  SI   +A +G+L  GK 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKW 274

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH + +++       V   ++DMYAK G +  AR VF+ + ++++V+WNSM+ A+ + G 
Sbjct: 275 VHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGL 334

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +EA+  F++M   G+    +T +  L AC+  G ++ G     ++ +  L  ++    +
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVT 394

Query: 381 LISMYSKCKKVDRA-ADIFSKLQGKTLVSWNAMI 413
           ++ +  +   ++ A   IF      T   W A++
Sbjct: 395 VVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALL 428



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 8/310 (2%)

Query: 332 LDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           LD G + PT       + ACA   +L+    +H  L   +   D  + NSLI +Y KC  
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS 101

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           V  A  +F K++ K +VSW ++I GYAQN    EA+     M     KP+ FT  S++ A
Sbjct: 102 VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
               +       IHAL ++  + ++V+V +AL+DMYA+CG +  A A+FD ++ ++  +W
Sbjct: 162 AGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N +I G+   G G+ A+ +F +M     +    T+    S  +  G +E+G      + K
Sbjct: 222 NALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVK 281

Query: 571 DYGIEPVMDHYG-AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
               + +    G  M+D+  ++G + +A    +++ +   +  + +ML A        LG
Sbjct: 282 SR--QKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTA---FAQYGLG 335

Query: 630 EKAANRLFEL 639
           ++A +   E+
Sbjct: 336 KEAVSHFEEM 345


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/578 (41%), Positives = 358/578 (61%), Gaps = 2/578 (0%)

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           R D  T    L A A +G LR G++V   A  AG+   V V ++L+ +YA+ G +  A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VFD M  R+ V+W++M+A +V  G P +A++++++M + GV+   V ++  + AC    +
Sbjct: 165 VFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +  G  VH  L +  +  DV    SL+ MY+K   +D A  +F  +  +  VSW+AMI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +AQNG+ +EAL  F  M++  I+PDS  +VS + A + +  ++  + +H  ++R  F+ N
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             + TA IDMY+KCG++ +A+ LF+M+++R +  WN MI   G HG G+ A+ LF +M E
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +P+  TF   +SA SHSGLVEEG  +F  +   + I P   HY  +VDLL R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           EA D +  M  EP + ++ A+L  C  +K +ELGE  A+ + EL PD+ G   L++N+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
           A   WDK+ +VR +M+  G +K PGCS +E++   H+F      HPQ + I + +  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDL 583

Query: 716 EIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
           E++  GY+P T  + HD+E+ V+E  LS HSEKLAIAFGLLN+ PG+ + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH+A KYIS +  REI+VRD  RFH FK+GVCSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 236/447 (52%), Gaps = 19/447 (4%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +T  L  C  +G++R G+ +  +    G+  D+F  + ++++YA+ G + +A K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDRMP RD V+W+T+VAGF   G    A+ +  RM E+G +GD + ++ ++ A     ++
Sbjct: 166 FDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R+G +VHG+ +R G    V  +T+LVDMYAK G ++ A  VF  M  RN VSW++MI+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  +EA+R+F+ M   G++P +  ++ AL AC+++G L+ G  VH  + + +   + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  + I MYSKC  +  A  +F+ +  + L+ WNAMI     +GR  +AL  F +M   
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMT-------ALIDMYA 487
            ++PD  T  S++ AL+   ++   K W   +V       N F +T        L+D+ A
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGCMV-------NHFKITPAEKHYVCLVDLLA 457

Query: 488 KCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           + G V  A  L   M  E  V  W  ++ G   +   +    + + +LE   +P+D+  L
Sbjct: 458 RSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVL 515

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYG 573
             +S    +    + +     L KD G
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSG 542


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/651 (37%), Positives = 395/651 (60%), Gaps = 19/651 (2%)

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +  D+   + +++M A+ G +  A K+FD + E+ +V W  +++ + Q   AE A++L  
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
              E+G   D  T+ S++ A   +GS+R+G  +H  A+R G  S   VS  LVDMYAK  
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303

Query: 289 ---RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE-EAMRIFQKMLDQGVEPTNVTIM 344
               ++ A  VF+ M   +V+SW ++I+ YV+ G  E + M +F +ML++ ++P ++T  
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +CA + D + G  VH  + +    +  ++ N+L+SMY++   ++ A  +F++L  +
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMR--SKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           +++              + E  ++    R    ++   S T  S+I A A + ++   + 
Sbjct: 424 SMIPC------------ITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQ 471

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA+ +++ F  + FV  +L+ MY++CG +  A   F+ + +R+V +W  MI G   HG 
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
            + A+ LF+ M+    KPND+T++  +SACSH GLV EG  YF S+++D+G+ P M+HY 
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLL R+G + EA +FI +MP++    V+  +LGAC+ H N+E+GE  A  + EL+P 
Sbjct: 592 CMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPR 651

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +   +VLL+N+YA A +WD++A++R+ M    L K  G S +E++N  H F +G T HP+
Sbjct: 652 DPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPR 711

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ IY  L+TL+ +IK  GYVPDT+ + HD+ D ++E  L  HSEK+A+AFGL+ +S   
Sbjct: 712 AQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK 771

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCH+A KY+S  T REII+RD +RFH  K+G CSCG+YW
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 27/458 (5%)

Query: 152 GEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNT 209
           G++R G+ +H +L+       D      ++ +Y++CG +  A  +FD M   RD+VSW  
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA-----VANVGSLRIGKAVHGY 264
           + +  A+NG    +L L+  M E G   +  T+ +   A     +  +    +   VH  
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +   + + V V +AL+DM A+ G + +AR VFDG+  + VV W  +I+ YV+G   EEA
Sbjct: 182 GL---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F   L+ G EP   T+   + AC +LG +  G+ +H L  ++ L +D  ++  L+ M
Sbjct: 239 VELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDM 298

Query: 385 YSKC---KKVDRAADIFSKLQGKTLVSWNAMILGYAQNG-RVNEALNYFCKMRSKNIKPD 440
           Y+K    + +D A  +F ++    ++SW A+I GY Q+G + N+ +  F +M +++IKP+
Sbjct: 299 YAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPN 358

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             T  S++ + A +S     + +HA VI+S       V  AL+ MYA+ G +  AR +F+
Sbjct: 359 HITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFN 418

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            + ER +     + +G            L ++++      +  TF   ISA +  G++ +
Sbjct: 419 QLYERSMIP--CITEGRD--------FPLDHRIVRMDVGISSSTFASLISAAASVGMLTK 468

Query: 561 GIH-YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           G   +  SLK  +G +  + +  ++V +  R G L +A
Sbjct: 469 GQQLHAMSLKAGFGSDRFVSN--SLVSMYSRCGYLEDA 504



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 159/316 (50%), Gaps = 16/316 (5%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C S+ +    R++   +IKS     H     LVS++ +   + +A RVF  + ++ 
Sbjct: 365 ILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER- 423

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            ++   + +G  +   LD  +   +RM   DV      +  L+     VG + +G+++H 
Sbjct: 424 -SMIPCITEG--RDFPLDHRI---VRM---DVGISSSTFASLISAAASVGMLTKGQQLHA 474

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF  D F    +V+MY++CG +E+A + F+ + +R+++SW ++++G A++G+AE 
Sbjct: 475 MSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAER 534

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALV 281
           AL L   M   G + + +T +++L A ++VG +R GK       R  G    +     +V
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMV 594

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPT 339
           D+ A+ G V+ A    + M  + + + W +++ A     N E      + +++ +  +P 
Sbjct: 595 DLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPA 654

Query: 340 NVTIMEALHACADLGD 355
              ++  L+A A L D
Sbjct: 655 PYVLLSNLYADAGLWD 670


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/700 (36%), Positives = 405/700 (57%), Gaps = 12/700 (1%)

Query: 37  RIYRHPSALL---------LEVCTSLKE--LRRILPLIIKSGLCDQHLF-QTKLVSLFCK 84
           +++ HPSA L         ++ C +L    L R++    ++   D  +F  + L+ ++  
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              L DA +VF+ + ++   L++ M+ GY K  S+  AV     MR     P        
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L V     ++  G ++H   +  G   ++     +V+MYAKC  +++ +K+F  MP  DL
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           V+WN +++G  QNGF + AL L   M + G R D +T+VS+LPA+ ++     GK +HGY
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +R      V + +ALVD+Y KC  V  A+ V+D  K+ +VV  ++MI+ YV  G  +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +++F+ +L+QG+ P  V I   L ACA +  ++ G  +H    +        + ++L+ M
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC ++D +  IFSK+  K  V+WN+MI  +AQNG   EALN F +M  + +K  + T+
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            SV+ A A L  I Y K IH +VI+     ++F  +ALIDMY KCG +  A  +F+ M E
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           ++  +WN +I  YG +GL K +V L   M E   K + +TFL  +SAC+H+G V+EG+  
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  + ++Y I P M+H+  MVDL  RAG+L++A + I  MP +P   ++GA+L AC++H+
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           NVEL E A+  LF+LDP   GY+VL++NI A A  WD ++KVR +M+   +QK PG S V
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           ++ N  H F +    HP S+ IY  L++++ E++  GY+P
Sbjct: 794 DVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 8/284 (2%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           ++  L  C     L  G+ VH       L  TD ++   L+ MY   ++   A  +FS L
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 402 ---QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK--PDSFTMVSVIPALAELSV 456
                   + WN +I G    G    AL ++ KM +      PDS T   V+ + A L  
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           I   + +H        + ++FV +ALI MYA  G +  AR +FD M ER    WNVM+DG
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y   G   +AVELF  M     +PN  T  C +S  +    +  G+   T L   YG+E 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT-LAVKYGLES 280

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            +     +V +  +   L++ W     MP +  +T +  M+  C
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVT-WNGMISGC 323


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/557 (43%), Positives = 354/557 (63%), Gaps = 5/557 (0%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + VH      G    + V+  L+ MY + G +E A+ +FDGM  R+  SW+ ++  Y + 
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS-- 376
           GN      +F+++L  G    + +    + AC DL DL+ G  +H +   LK G D    
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCI--TLKCGLDYGHF 187

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           +  +L+ MY++CK V+ A  IF K+  + L +W  MI   A++G   E+L +F +MR++ 
Sbjct: 188 VCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQG 247

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           I PD   +V+V+ A A+L  +  AK IHA +  + +  +V + TA+IDMYAKCG+V +AR
Sbjct: 248 IVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESAR 307

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +FD M  R+V TW+ MI  YG HG G+ A+ELF  ML     PN ITF+  + ACSH+G
Sbjct: 308 WIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAG 367

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           L+EEG  +F+S+  +YG+ P + HY  MVDLLGRAGRL+EA + I+ MP+E    ++GA+
Sbjct: 368 LIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGAL 427

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           LGAC+IH++++L E+ A  L +L   + G++VLL+NIYA A  W+ +AK R +M K GL+
Sbjct: 428 LGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLR 487

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PG + +E+  +++ F  G   HP+S  IY  L+ L ++++ AGY PDTN + +DV++ 
Sbjct: 488 KIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEE 547

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
           V++ LL SHSEKLAIAFGLL    G  I I KNLRVCGDCH   K++SL+  + IIVRD 
Sbjct: 548 VKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDA 607

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK GVCSC DYW
Sbjct: 608 KRFHHFKEGVCSCRDYW 624



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 216/412 (52%), Gaps = 15/412 (3%)

Query: 8   QLSVFTNS---TPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLII 64
           Q  V  NS   TP     E  H L    +  ++ +R  S+LL   C +L ++R++   I 
Sbjct: 26  QFDVNCNSNEPTPCSQESECSHVL----HYDTKRFR--SSLL--SCRNLFQVRQVHAQIA 77

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
            +G         KL+ ++ +  +L DA  +F+ +  +    +  ++ GYAK  +      
Sbjct: 78  TNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCF- 136

Query: 125 FLIRMRYDDVAPVV-YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           ++ R      AP+  Y+   +++ C D+ +++ G+ IH   +  G     F    +V+MY
Sbjct: 137 WMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMY 196

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           A+C  +E+A+++F +M +RDL +W  ++   A++G    +L    RM  +G   D + +V
Sbjct: 197 ARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALV 256

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +++ A A +G++   KA+H Y    G+   V + TA++DMYAKCG VE+AR +FD M+ R
Sbjct: 257 TVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVR 316

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FV 362
           NV++W++MIAAY   G  E+A+ +F  ML  G+ P  +T +  L+AC+  G +E G  F 
Sbjct: 317 NVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFF 376

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
             + D+  +  DV     ++ +  +  ++D A ++   +   K  V W A++
Sbjct: 377 SSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 5/375 (1%)

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C ++ ++R   ++H Q+  NG   +L     ++ MY + G +E+A ++FD M +R   SW
Sbjct: 63  CRNLFQVR---QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSW 119

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           + IV G+A+ G       +   +   G   D  +   ++ A  ++  L+ G+ +H   ++
Sbjct: 120 SVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLK 179

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G D    V   LVDMYA+C  VE A  +F  M  R++ +W  MI A  E G P E++  
Sbjct: 180 CGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVF 239

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F +M +QG+ P  V ++  ++ACA LG + +   +H  ++      DV +  ++I MY+K
Sbjct: 240 FDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAK 299

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  V+ A  IF ++Q + +++W+AMI  Y  +G+  +AL  F  M    I P+  T VS+
Sbjct: 300 CGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSL 359

Query: 448 IPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           + A +   +I    ++  ++        +V   T ++D+  + G +  A  + + M  E+
Sbjct: 360 LYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEK 419

Query: 506 HVTTWNVMIDGYGTH 520
               W  ++     H
Sbjct: 420 DEVLWGALLGACRIH 434


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/651 (39%), Positives = 383/651 (58%), Gaps = 13/651 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   +++ YAK   +E A+++FD MP+ D VS+NT++A +A+ G  + A  L   M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 232 EEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           E     D  T+  I+ A   NVG +R    +H  ++  G DS V+V  AL+  Y+K G +
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIR---QLHALSVVTGLDSYVSVGNALITSYSKNGFL 189

Query: 291 ETARLVFDGM-KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           + AR +F  + + R+ VSWNSM+ AY++     +A+ ++ +M  +G+     T+   L A
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSKLQGKTLVS 408
             ++ DL  G+  H  L +     +  + + LI +YSKC   +     +F ++    LV 
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309

Query: 409 WNAMILGYA-QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           WN MI GY+      +EAL  F +++    +PD  ++V VI A + +S     + +H L 
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 468 IRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           ++     N + V  ALI MY+KCG +  A+ LFD M E +  ++N MI GY  HG+G  +
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           + LF +MLE    P +ITF+  ++AC+H+G VE+G  YF  +K+ +GIEP   H+  M+D
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           LLGRAG+L+EA   I+ +P +PG   + A+LGAC+IH NVEL  KAANRL +LDP     
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +V+LANIY+        A VR +M  +G++K PGCS +E+   +H F +  T HP  K+I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609

Query: 707 YTFLETLIDEIKAAGYVPDTNSIH-----DVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
             +LE ++ +IK  GY P+  S        V    +E  L  HSEKLA++FGL+++  G 
Sbjct: 610 QEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGE 669

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I + KNLR+C DCHNA KYIS V  REI VRD HRFHCFK+G CSCG YW
Sbjct: 670 PILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 260/518 (50%), Gaps = 15/518 (2%)

Query: 26  HTLSQRAYIPSRIYRHPSALLL-EVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           H L  ++++P+  Y     LLL   C  L   RR+      +  C+   F T L+S + K
Sbjct: 31  HALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD---HTHDCNVFSFNT-LISAYAK 86

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
            + +  A ++F+ +P      Y+T++  YA+      A    + MR   +    +  + +
Sbjct: 87  ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGI 146

Query: 145 LKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-R 202
           +  CG +VG IR   ++H   +V G    +     ++  Y+K G ++EA ++F  + E R
Sbjct: 147 ITACGINVGLIR---QLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D VSWN++V  + Q+     AL+L   M   G   D  T+ S+L A  NV  L  G   H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGR-VETARLVFDGMKSRNVVSWNSMIAAY-VEGGN 320
              +++G+    +V + L+D+Y+KCG  +   R VFD + + ++V WN+MI+ Y +    
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTN 379
            +EA+  F+++   G  P + +++  + AC+++    +G  VH L  +L + ++ +S+ N
Sbjct: 324 SDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNN 383

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LI+MYSKC  +  A  +F  +     VS+N+MI GYAQ+G   ++L+ F +M   +  P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTP 443

Query: 440 DSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            + T +SV+ A A    +   K + + +  +   E      + +ID+  + G +  A  L
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503

Query: 499 FDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            + +  +     W+ ++     HG  + A++  N++L+
Sbjct: 504 IETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 210/463 (45%), Gaps = 41/463 (8%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV--------- 305
           LR GK++H   +++   +   +S   + +Y+KC R+  AR VFD     NV         
Sbjct: 24  LRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISA 83

Query: 306 ----------------------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
                                 VS+N++IAAY   G+ + A ++F +M +  ++    T+
Sbjct: 84  YAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTL 143

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-Q 402
              + AC     L R +  H L     L + VS+ N+LI+ YSK   +  A  IF  L +
Sbjct: 144 SGIITACGINVGLIRQL--HALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSE 201

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            +  VSWN+M++ Y Q+   ++AL  + +M  + +  D FT+ SV+ A   +  +     
Sbjct: 202 DRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQ 261

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGA-VGTARALFDMMNERHVTTWNVMIDGYGTH- 520
            HA +I+S + +N  V + LID+Y+KCG  +   R +FD ++   +  WN MI GY  + 
Sbjct: 262 FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYE 321

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVMD 579
            L   A+E F ++     +P+D + +C ISACS+     +G   +  +LK D     +  
Sbjct: 322 DLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISV 381

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           +  A++ +  + G L +A      MP E     + +M+     H           R+ E+
Sbjct: 382 N-NALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM 439

Query: 640 D--PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           D  P    +  +LA       + D       + +K G++   G
Sbjct: 440 DFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/734 (35%), Positives = 409/734 (55%), Gaps = 76/734 (10%)

Query: 154 IRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQI---EEAYKMFDRMPERDLVSWNT 209
           + + ++ H  ++ +N FS D    T +++ YA    +   + +  +   +P   L S+++
Sbjct: 16  LSQARQAHALILRLNLFS-DTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           ++  FA++      L   + +H      D   + S + + A++ +L  G+ +H +A  +G
Sbjct: 75  LIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           F +   V+++L  MY KC R+  AR +FD M  R+VV W++MIA Y   G  EEA  +F 
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194

Query: 330 KMLDQGVEPTNV-----------------------------------TIMEALHACADLG 354
           +M   GVEP  V                                   T+   L A   L 
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK------------------------- 389
           D+  G  VH  + +  LG+D  + ++++ MY KC                          
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314

Query: 390 ------KVDRAADIFSKLQGKTL----VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
                  VD A ++F+K + + +    V+W ++I   +QNG+  EAL  F  M++  ++P
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           ++ T+ S+IPA   +S + + K IH   +R     +V+V +ALIDMYAKCG +  AR  F
Sbjct: 375 NAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCF 434

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M+  ++ +WN ++ GY  HG  K  +E+F+ ML+   KP+ +TF C +SAC+ +GL E
Sbjct: 435 DKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTE 494

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   + S+ +++GIEP M+HY  +V LL R G+L EA+  I++MP EP   V+GA+L +
Sbjct: 495 EGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C++H N+ LGE AA +LF L+P   G ++LL+NIYA+  +WD+  ++R +M+ KGL+K P
Sbjct: 555 CRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNP 614

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           G S +E+ ++VH   +G   HPQ K I   L+ L  ++K +GY+P TN +  DVE+  +E
Sbjct: 615 GYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKE 674

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            +L  HSEKLA+  GLLN+SPG  + + KNLR+C DCH   K IS + GREI VRD +RF
Sbjct: 675 QILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRF 734

Query: 799 HCFKNGVCSCGDYW 812
           H FK+GVCSCGD+W
Sbjct: 735 HHFKDGVCSCGDFW 748



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 252/580 (43%), Gaps = 82/580 (14%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD---AARVFEPIPDKLDALYH 107
            SL + R+   LI++  L       T L+S +    SLS    +  +   +P      + 
Sbjct: 14  ASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFS 73

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           +++  +A+       ++    +    + P  +     +K C  +  +  G+++H     +
Sbjct: 74  SLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAAS 133

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD------------------------ 203
           GF  D    + + +MY KC +I +A K+FDRMP+RD                        
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF 193

Query: 204 -----------LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
                      LVSWN ++AGF  NGF + A+ +   M  +G   D  T+  +LPAV  +
Sbjct: 194 GEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL 253

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC------------------------- 287
             + +G  VHGY ++ G  S   V +A++DMY KC                         
Sbjct: 254 EDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313

Query: 288 ------GRVETARLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
                 G V+TA  VF+  K +    NVV+W S+IA+  + G   EA+ +F+ M   GVE
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VTI   + AC ++  L  G  +H    +  +  DV + ++LI MY+KC ++  A   
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F K+    LVSWNA++ GYA +G+  E +  F  M     KPD  T   V+ A A+  + 
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLT 493

Query: 458 RYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMID 515
               +  +++      E  +     L+ + ++ G +  A ++  +M  E     W  ++ 
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553

Query: 516 GYGTH---GLGKAAVE-LFNKMLEGPTKPNDITFLCAISA 551
               H    LG+ A E LF   LE PT P +   L  I A
Sbjct: 554 SCRVHNNLSLGEIAAEKLF--FLE-PTNPGNYILLSNIYA 590



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 212/460 (46%), Gaps = 83/460 (18%)

Query: 22  HEHKHTLSQRAYI-PSRIYRHPSALLL----EVCTSLKEL---RRILPLIIKSGLCDQHL 73
           H   H L+  +++ P R+   P A LL    + C SL+ L   +++      SG     +
Sbjct: 83  HHFPHVLTTFSHLHPLRLI--PDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSI 140

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + L  ++ K + + DA ++F+ +PD+   ++  M+ GY++   +++A      MR   
Sbjct: 141 VASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGG 200

Query: 134 VAPVVYNYTYLLKVCGDVG-----------------------------------EIRRGK 158
           V P + ++  +L   G+ G                                   ++  G 
Sbjct: 201 VEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL-------------- 204
           ++HG +I  G   D F ++ +++MY KCG ++E  ++FD + E ++              
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNG 320

Query: 205 ---------------------VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                                V+W +I+A  +QNG    AL+L   M   G   + +TI 
Sbjct: 321 MVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIP 380

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S++PA  N+ +L  GK +H +++R G    V V +AL+DMYAKCGR++ AR  FD M + 
Sbjct: 381 SLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSAL 440

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N+VSWN+++  Y   G  +E M +F  ML  G +P  VT    L ACA  G  E G   +
Sbjct: 441 NLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCY 500

Query: 364 KLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKL 401
             + + + G +  M +   L+++ S+  K++ A  I  ++
Sbjct: 501 NSMSE-EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 163/365 (44%), Gaps = 39/365 (10%)

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF---DGMKSRNVV 306
           ++  SL   +  H   +R    S   ++T+L+  YA    + T +L       +    + 
Sbjct: 11  SSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLF 70

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           S++S+I A+    +    +  F  +    + P    +  A+ +CA L  L+ G  +H   
Sbjct: 71  SFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFA 130

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
                 TD  + +SL  MY KC ++  A  +F ++  + +V W+AMI GY++ G V EA 
Sbjct: 131 AASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAK 190

Query: 427 NYFCKMRSKNIKP-----------------------------------DSFTMVSVIPAL 451
             F +MRS  ++P                                   D  T+  V+PA+
Sbjct: 191 ELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAV 250

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
             L  +     +H  VI+     + FV++A++DMY KCG V     +FD + E  + + N
Sbjct: 251 GCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLN 310

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
             + G   +G+   A+E+FNK  +   + N +T+   I++CS +G   E +  F  ++  
Sbjct: 311 AFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA- 369

Query: 572 YGIEP 576
           YG+EP
Sbjct: 370 YGVEP 374


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/643 (39%), Positives = 379/643 (58%), Gaps = 39/643 (6%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+++   +++ YAK G +E  + +FD+MP RD VS+NT++A FA NG +  AL ++ RM 
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E+G +    + V+ L A + +  LR GK +HG  + A       V  A+ DMYAKCG ++
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            ARL+FDGM  +NVVSWN MI+ YV+ GNP E + +F +M   G++P  VT+   L+A  
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA-- 265

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
                                            Y +C +VD A ++F KL  K  + W  
Sbjct: 266 ---------------------------------YFRCGRVDDARNLFIKLPKKDEICWTT 292

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI+GYAQNGR  +A   F  M  +N+KPDS+T+ S++ + A+L+ + + + +H  V+   
Sbjct: 293 MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMG 352

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            + ++ V +AL+DMY KCG    AR +F+ M  R+V TWN MI GY  +G    A+ L+ 
Sbjct: 353 IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYE 412

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M +   KP++ITF+  +SAC ++ +V+EG  YF S+  ++GI P +DHY  M+ LLGR+
Sbjct: 413 RMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSI-SEHGIAPTLDHYACMITLLGRS 471

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G +++A D IQ MP EP   ++  +L  C    +++  E AA+ LFELDP   G +++L+
Sbjct: 472 GSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAELAASHLFELDPRNAGPYIMLS 530

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           N+YAA   W  +A VR++M++K  +K    S VE+ N+VH F S    HP+  +IY  L 
Sbjct: 531 NLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELN 590

Query: 712 TLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG-STIHIRKNL 769
            LI  ++  GY PDTN + H+V +  +   +S HSEKLA+AF L+    G + I I KN+
Sbjct: 591 RLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNI 650

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVC DCH   K+ S+   R II+RD +RFH F  G CSC D W
Sbjct: 651 RVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 230/482 (47%), Gaps = 74/482 (15%)

Query: 72  HLFQTK-------LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD---- 120
           +LFQ K       L+ L+ K+  LSDA  VF+ +  +    ++T+L  YAK   ++    
Sbjct: 51  NLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHV 110

Query: 121 --------DAVSF-------------------LIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
                   D+VS+                   L+RM+ D   P  Y++   L+ C  + +
Sbjct: 111 VFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLD 170

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R GK+IHG+++V     + F    + +MYAKCG I++A  +FD M ++++VSWN +++G
Sbjct: 171 LRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISG 230

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           + + G     + L   M   G + D +T+ ++L A                         
Sbjct: 231 YVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------------------------- 265

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
                     Y +CGRV+ AR +F  +  ++ + W +MI  Y + G  E+A  +F  ML 
Sbjct: 266 ----------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLR 315

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           + V+P + TI   + +CA L  L  G  VH  +  + +   + ++++L+ MY KC     
Sbjct: 316 RNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLD 375

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  IF  +  + +++WNAMILGYAQNG+V EAL  + +M+ +N KPD+ T V V+ A   
Sbjct: 376 ARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN 435

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD-MMNERHVTTWNV 512
             +++  +     +        +     +I +  + G+V  A  L   M +E +   W+ 
Sbjct: 436 ADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWST 495

Query: 513 MI 514
           ++
Sbjct: 496 LL 497



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 213/455 (46%), Gaps = 54/455 (11%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCK 84
           + +  + P++ Y H +AL  + C+ L +LR   +I   I+ + L +    +  +  ++ K
Sbjct: 146 MQEDGFQPTQ-YSHVNAL--QACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAK 202

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              +  A  +F+ + DK    ++ M+ GY K  + ++ +     M+   + P        
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKP-------- 254

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
                                      DL  ++ V+N Y +CG++++A  +F ++P++D 
Sbjct: 255 ---------------------------DLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDE 287

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           + W T++ G+AQNG  E A  L   M     + D  TI S++ + A + SL  G+ VHG 
Sbjct: 288 ICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGK 347

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +  G D+ + VS+ALVDMY KCG    AR++F+ M  RNV++WN+MI  Y + G   EA
Sbjct: 348 VVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEA 407

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + ++++M  +  +P N+T +  L AC +   ++ G      + +  +   +     +I++
Sbjct: 408 LTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITL 467

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE---ALNYFCKMRSKNIKPDS 441
             +   VD+A D+   +  +      + +L     G +     A ++  ++  +N  P  
Sbjct: 468 LGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAELAASHLFELDPRNAGP-- 525

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCF-EKN 475
           + M+S + A          +W    V+RS   EKN
Sbjct: 526 YIMLSNLYAAC-------GRWKDVAVVRSLMKEKN 553


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/745 (33%), Positives = 416/745 (55%), Gaps = 3/745 (0%)

Query: 71  QHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           +++F T  ++  + K  +LS+A  +F+ +  +    +  ++ GYA+     +A    I M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
               + P   +   LL    +   +   +++H  +I  G+   L     +++ Y K   +
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
             A+++F+ +PERD V++N ++ G+++ GF   A++L  +M E G R    T  +IL A 
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
             +  +  G+ VHG+ ++  F   V V+ AL+D Y+K  RV  A  +F  M   + +S+N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            ++  Y   G  +E++ +F+++   G +  N      L   A   +L+ G  +H      
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
              +++ + NSL+ MY+KC +   A  IFS L  ++ V W AMI  Y Q G   + L  F
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M+   I  D+ T  S++ A A L+ +   K +H+ +I S +  NVF  +AL+DMYAKC
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++  A  +F  M  R+  +WN +I  Y  +G G   + LF +M+    +P+ ++ L  +
Sbjct: 550 GSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
            ACSH GLVEEG+ YF S+ + Y + P  +HY + +D+L R GR +EA   + +MP EP 
Sbjct: 610 CACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPD 669

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRT 668
             ++ ++L +C IHKN EL +KAAN+LF +    +   +V ++NIYAAA  WD + KV+ 
Sbjct: 670 EIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKK 729

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN- 727
            M ++G++K P  S VE+K++ H F +    HPQ + I   L+ L +++   GY PD++ 
Sbjct: 730 AMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSC 789

Query: 728 SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
           ++H+V++ V+   L  HSE++AIAF L+++  GS I + KNLR C DCH A K IS +  
Sbjct: 790 ALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVR 849

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           REI VRD  RFH F++G C+C DYW
Sbjct: 850 REITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 245/491 (49%), Gaps = 16/491 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S+ E+R++   +IK G     +    L+  +CK  SL  A ++F  IP++    ++ +L 
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY+K     +A++   +M+     P  + +  +L     + +I  G+++HG ++   F  
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F    +++ Y+K  ++ EA K+F  MPE D +S+N +V  +A NG  + +L+L   + 
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392

Query: 232 EEG---RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
             G   R   F T++SI     N   L IG+ +H   +     S + V  +LVDMYAKCG
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLN---LDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
               A  +F  +  ++ V W +MI++YV+ G  E+ +++F +M    +     T    + 
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACA L  L  G  +H  +      ++V   ++L+ MY+KC  +  A  +F ++  +  VS
Sbjct: 510 ACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVS 569

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHAL- 466
           WNA+I  YAQNG  +  L  F +M    ++PDS +++S++ A +   ++    ++  ++ 
Sbjct: 570 WNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMT 629

Query: 467 -VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG--- 521
            + +   +K  +  T  IDM  + G    A  L   M  E     W+ +++  G H    
Sbjct: 630 RIYKLVPKKEHYAST--IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQE 687

Query: 522 -LGKAAVELFN 531
              KAA +LFN
Sbjct: 688 LAKKAANQLFN 698



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 33/491 (6%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP------------------- 200
           +   +I  GF+ + +    +V  + + G +  A K+FD MP                   
Sbjct: 88  VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGN 147

Query: 201 ------------ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                       +R  V+W  ++ G+AQN     A  L   M   G   D +++ ++L  
Sbjct: 148 LSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 207

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
                S+   + VH + ++ G+DS + VS +L+D Y K   +  A  +F+ +  R+ V++
Sbjct: 208 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF 267

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N+++  Y + G   EA+ +F KM + G  PT  T    L A   L D+E G  VH  + +
Sbjct: 268 NALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVK 327

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V + N+L+  YSK  +V  A+ +F ++     +S+N ++  YA NGRV E+L  
Sbjct: 328 CNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLEL 387

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +++       +F   +++   A    +   + IH+  I +     + V  +L+DMYAK
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG  G A  +F  +  +    W  MI  Y   GL +  ++LF +M       +  T+   
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           + AC+    +  G    + +     I  V     A+VD+  + G + +A    Q+MP+  
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAKCGSIKDALQMFQEMPVRN 566

Query: 609 GITVFGAMLGA 619
            ++ + A++ A
Sbjct: 567 SVS-WNALISA 576


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/555 (42%), Positives = 352/555 (63%), Gaps = 1/555 (0%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K VH      G    + V+  L+ M AK   + TA L+F+ M+ R+ VSW+ MI  +V+ 
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G+ E   + F++++  G +P N ++   + AC D   L  G  +H  + +  L  D  + 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++L+ MY+KC  +D A  +F ++  K LV+   MI GYA+ G+ NE+   F +MR     
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD   MV+++ A A+L  +  A+ +H  V    +  +V + TA+IDMYAKCG++ ++R +
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M +++V +W+ MI  YG HG G+ A+ELF+ ML     PN ITF+  + ACSH+GLV
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           ++G+  F+ +   YG+ P + HY  MVDLLGRAGRL++A   I+ M +E    ++ A LG
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLG 379

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC+IH+ V+L EKAA  L  L     G+++LL+NIYA A  W  +AK+R +M K+ L+K 
Sbjct: 380 ACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKI 439

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PG + +E+ N ++ F +G   H +S  IY  L++L  ++++AGYVPDTNS+ HDV++ V+
Sbjct: 440 PGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVK 499

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L +HSEKLAIAFGL+ +  G+ I I KNLRVCGDCH+  K +S +T R+IIVRD +R
Sbjct: 500 LGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANR 559

Query: 798 FHCFKNGVCSCGDYW 812
           FH FK G+CSCGDYW
Sbjct: 560 FHHFKEGICSCGDYW 574



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 191/354 (53%), Gaps = 1/354 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C ++ +++++   +  +G+    +   KL+ +  K+  L  A  +F  + ++    +  M
Sbjct: 13  CRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVM 72

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G+ K    +        +      P  ++  +++K C D   +  G+ IH  ++ NG 
Sbjct: 73  IGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGL 132

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            LD F  + +V+MYAKCG I+ A ++FDRMP++DLV+   ++AG+A+ G    +  L  +
Sbjct: 133 HLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQ 192

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  +G   D + +V+I+ A A +G++   + VH Y     +   V + TA++DMYAKCG 
Sbjct: 193 MRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGS 252

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++++R +FD M+ +NV+SW++MI AY   G   EA+ +F  ML+ G+ P  +T +  L+A
Sbjct: 253 IDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYA 312

Query: 350 CADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           C+  G ++ G+ +  L+     +  DV     ++ +  +  ++D+A  +   ++
Sbjct: 313 CSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENME 366



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 189/365 (51%), Gaps = 5/365 (1%)

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C ++ +I   K++H Q+   G   DL     ++ M AK   +  A+ +F++M ERD VSW
Sbjct: 13  CRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSW 69

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           + ++ GF +NG  E        +   G + D  ++  ++ A  +   L +G+ +H   ++
Sbjct: 70  SVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLK 129

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G      V + LVDMYAKCG ++ A+ +FD M  +++V+   MIA Y E G P E+  +
Sbjct: 130 NGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVL 189

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F +M   G  P  V ++  ++ACA LG + +   VH  +   +   DV +  ++I MY+K
Sbjct: 190 FDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAK 249

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +D + +IF +++ K ++SW+AMI  Y  +G+  EAL  F  M +  I P+  T +S+
Sbjct: 250 CGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISL 309

Query: 448 IPALAELSVIRYAKWIHALV-IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           + A +   ++     + +L+ +      +V   T ++D+  + G +  A  L + M  E+
Sbjct: 310 LYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEK 369

Query: 506 HVTTW 510
               W
Sbjct: 370 DEGIW 374


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/686 (35%), Positives = 389/686 (56%), Gaps = 15/686 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C + G +   K +HG ++  G  +D+F  T +VN+Y +CG  ++A  +FD MP
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E+++V+W  ++ G+  N    LAL++   M + GR     T+  +L A     ++ +GK 
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHGY ++ G  SI ++  +L  +Y K G +E+    F  +  +NV++W +MI+A  E  N
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260

Query: 321 PEE-AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             E  + +F  ML   V P   T+   +  C    D+  G  V     ++   T++ + N
Sbjct: 261 YTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKN 320

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----------NGRVNEALNY 428
           S + +Y +  + + A  +F +++  ++++WNAMI G+AQ             R  +AL  
Sbjct: 321 STMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  +    +KPD FT  S++   + +  +   + IHA  I++ F  +V V +AL++MY K
Sbjct: 381 FRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A   F  M  R + TW  MI GY  HG    A++LF  M+    KPN+ITF+  
Sbjct: 441 CGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSL 500

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACS++GLVEE + YF  ++ +Y IEP+MDHYG M+D+  R GRL++A+ FI++   EP
Sbjct: 501 LSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP 560

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++ +++  C+ H N+EL   AA+RL EL P     +VLL N+Y +   W  +A+VR 
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRK 620

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           + + + L      S + ++++V+ F +    HPQS  +Y  LETL+++ KA GY P  N+
Sbjct: 621 LSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNT 680

Query: 729 -IHDVED--YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            ++D E+        L  HSE+LA+A GLL + PG T+ I KN+ +C DCH++ K+ SL+
Sbjct: 681 ELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLL 740

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDY 811
             REI+VRD  R H FK+G CSCGD+
Sbjct: 741 ANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 236/487 (48%), Gaps = 14/487 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K+G        T LV+++ +  +  DA  +F+ +P+K    +  ++ GY   +    A
Sbjct: 104 MVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLA 163

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +   + M      P  Y    +L  C     I  GK++HG  I  G +        +  +
Sbjct: 164 LEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRL 223

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEEGRRGDFIT 241
           Y K G +E   + F R+P++++++W T+++  A++  + EL L+L   M +     +  T
Sbjct: 224 YTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFT 283

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + S++        + +GK V G+  + G  + + V  + + +Y + G  E A  +F+ M+
Sbjct: 284 LTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME 343

Query: 302 SRNVVSWNSMIAAYVEGGNPE-----------EAMRIFQKMLDQGVEPTNVTIMEALHAC 350
             +V++WN+MI+ + +  +             +A++IF+ ++   ++P   T    L  C
Sbjct: 344 DNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVC 403

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           + +  LE+G  +H    +    +DV + ++L++MY+KC  ++ A   F ++  +TLV+W 
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWT 463

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIR 469
           +MI GY+Q+GR ++A+  F  M     KP+  T VS++ A +   ++  A ++   +   
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNE 523

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVE 528
              E  +     +IDM+ + G +  A A       E +   W+ ++ G  +HG  + A  
Sbjct: 524 YHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFY 583

Query: 529 LFNKMLE 535
             +++LE
Sbjct: 584 AADRLLE 590



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 205/427 (48%), Gaps = 29/427 (6%)

Query: 37  RIYRHPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           ++ R+PS      +L  C +   +   +++    IK G          L  L+ K  +L 
Sbjct: 172 KLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLE 231

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDD-AVSFLIRMRYDDVAPVVYNYTYLLKVC 148
              R F+ IPDK    + TM+   A+  +  +  ++  + M   +V P  +  T ++ +C
Sbjct: 232 SGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLC 291

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           G   ++  GK++ G     G + +L      + +Y + G+ EEA ++F+ M +  +++WN
Sbjct: 292 GTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWN 351

Query: 209 TIVAGFAQ-------------NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            +++GFAQ              GF   AL +   +     + D  T  SIL   + + +L
Sbjct: 352 AMISGFAQIMDSAKDDLHARSRGFQ--ALKIFRDLVRSAMKPDLFTFSSILSVCSTMMAL 409

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G+ +H   ++ GF S V V++ALV+MY KCG +E A   F  M +R +V+W SMI+ Y
Sbjct: 410 EQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGY 469

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTD 374
            + G P +A+++F+ M+  G +P  +T +  L AC+  G +E  + +   + ++  +   
Sbjct: 470 SQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPL 529

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +     +I M+ +  ++D A   F K +G       W++++ G   +G  N  L ++   
Sbjct: 530 MDHYGCMIDMFVRLGRLDDAY-AFIKRKGFEPNEAIWSSLVAGCRSHG--NMELAFYAAD 586

Query: 433 RSKNIKP 439
           R   +KP
Sbjct: 587 RLLELKP 593



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 17/396 (4%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M +EG+       V +L      GSL   KA+HG+ ++ G    + V+T+LV++Y +CG 
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
            + AR +FD M  +NVV+W ++I  Y     P  A+ +F +ML  G  P++ T+   L A
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C    +++ G  VH    +    +  S+ NSL  +Y+K   ++     F ++  K +++W
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248

Query: 410 NAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
             MI   A++    E  LN F  M    + P+ FT+ SV+        +   K +     
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCF 308

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG---------- 518
           +     N+ V  + + +Y + G    A  LF+ M +  V TWN MI G+           
Sbjct: 309 KIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDL 368

Query: 519 -THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIE 575
                G  A+++F  ++    KP+  TF   +S CS    +E+G  IH  T +K  +  +
Sbjct: 369 HARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQT-IKTGFLSD 427

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
            V++   A+V++  + G +  A     +MP    +T
Sbjct: 428 VVVN--SALVNMYNKCGCIEYATKAFVEMPTRTLVT 461


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/663 (39%), Positives = 379/663 (57%), Gaps = 5/663 (0%)

Query: 155 RRGKEIHGQ-LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           R G+  H + L +   +L  F    +VN+Y+K      A       P   +VS+   ++G
Sbjct: 32  RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR-IGKAVHGYAMRAGFDS 272
            AQ+G    AL     M   G R +  T  S   A A+      IG  +H  A+R G+  
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 273 IVN-VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           +   VS A +DMY K GR++ AR +F  M +RNVV+WN+++   V  G P E +  +  +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
            + G  P  V+     +ACA    L  G   H  + +     DVS+ NS++  Y KC+  
Sbjct: 212 REAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCA 271

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
            +A  +F  +  +  VSW +M+  YAQNG   EA   +   R    +P  F + S +   
Sbjct: 272 GKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC 331

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L  +   + +HA+ +RSC + N+FV +AL+DMY KCG V  A  +F    +R++ TWN
Sbjct: 332 AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWN 391

Query: 512 VMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
            MI GY   G  + A+ +F+ M+  G T PN IT +  I++CS  GL ++G   F ++++
Sbjct: 392 AMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRE 451

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
            +GIEP  +HY  +VDLLGRAG   +A++ IQ MP+ P I+V+GA+LGACK+H   ELG 
Sbjct: 452 RFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGR 511

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA +LFELDP + G HVLL+N++A+A  W +   +R  M+  G++K PGCS V  KN V
Sbjct: 512 IAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVV 571

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLA 749
           H F +  TKH     I   L  L  +++AAGY+PDT  S++D+E+  +E+ +  HSEKLA
Sbjct: 572 HVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLA 631

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +AFGL+   PG  I I KNLR+C DCH A K+IS + GREIIVRD +RFH FK   CSCG
Sbjct: 632 LAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCG 691

Query: 810 DYW 812
           DYW
Sbjct: 692 DYW 694



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 3/347 (0%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           + ++ K   L  A  +F  +P++    ++ ++          + +     +R     P V
Sbjct: 161 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 220

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
            +       C     +  G++ HG ++  GF +D+  +  +V+ Y KC    +A  +FD 
Sbjct: 221 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 280

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M  R+ VSW ++VA +AQNG  E A          G       + S L   A +  L +G
Sbjct: 281 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 340

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           +A+H  A+R+  D+ + V++ALVDMY KCG VE A  +F     RN+V+WN+MI  Y   
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 400

Query: 319 GNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVS 376
           G+ + A+ +F  M+  G   P  +T++  + +C+  G  + G      + ++  +     
Sbjct: 401 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRV 422
               ++ +  +    ++A ++   +  +  +S W A++     +G+ 
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKT 507



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 3/275 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K G          +V  + K      A  VF+ +  +    + +M+  YA+  + ++
Sbjct: 245 FVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEE 304

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A +  +  R     P  +  +  L  C  +  +  G+ +H   + +    ++F  + +V+
Sbjct: 305 AFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVD 364

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFI 240
           MY KCG +E+A ++F   P+R+LV+WN ++ G+A  G A+ AL +   M   G    ++I
Sbjct: 365 MYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYI 424

Query: 241 TIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           T+V+++ + +  G  + G +       R G +        +VD+  + G  E A  V  G
Sbjct: 425 TLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQG 484

Query: 300 MKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD 333
           M  R  +S W +++ A    G  E      +K+ +
Sbjct: 485 MPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 519


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/717 (34%), Positives = 394/717 (54%), Gaps = 12/717 (1%)

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           KL+ L+   L   +K   L +A  FL  M   DV+   ++Y  L + CG +  +  G+ I
Sbjct: 53  KLENLH---LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLI 109

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +L     +        ++ MY  CG   +  K+FD M  ++LVSW  +++ +A+NG  
Sbjct: 110 HDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGEL 169

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A+ L + M   G R +    +S+L +      L +GK +H + +RA  ++ + V TA+
Sbjct: 170 EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAI 229

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +MY +CG +E A+LVFDGM ++N V+W  ++  Y +    E A+ +F +M  +GVE   
Sbjct: 230 CNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDE 289

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
                 L  C  L D + G  +H  + +L   ++VS+   L+  Y KC  ++ A   F +
Sbjct: 290 FVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGR 349

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +     VSW+A+I G++Q+GR+ + +  F  +RS+ +  +SF   SV  A A  + +   
Sbjct: 350 ISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMG 409

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
              H   I+      ++  +A++ MY+KCG +  AR  F+ ++E     W  +I GY  H
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYH 469

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A+  F +M     +PN +TF+  ++ACSHSGLV E   Y  S+ +DYG++P +DH
Sbjct: 470 GNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDH 529

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  M+D   RAG L EA + I +MP EP    + ++LG C  H +++LG+ AA  LF LD
Sbjct: 530 YDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLD 589

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P +   ++LL N+Y+A   W++   VR +M ++ L+K   CS + +K +VH F  G   H
Sbjct: 590 PGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHH 649

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDY-----VQENLLSSHSEKLAIAFGLL 755
           PQ++ IY+ LE    E K +        +++ +D       ++  L  HSEKLAIAFGL+
Sbjct: 650 PQTEAIYSKLE----EFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLI 705

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++   + I + KNLR C DCH   K +S+VTGR+I+VRD  RFH FK+G CSC DYW
Sbjct: 706 STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 243/506 (48%), Gaps = 8/506 (1%)

Query: 41  HPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H    L E C  L+ L   R I   + ++        +  L+ ++C   S  D  +VF+ 
Sbjct: 88  HSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDE 147

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +  K    +  ++  YAK   L+ A+     M+   + P    Y  LL+ C     +  G
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K+IH  +I    + ++   T + NMY +CG +E A  +FD M  ++ V+W  ++ G+ Q 
Sbjct: 208 KQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              E+AL+L  RM  EG   D      +L     +    +G+ +H + ++ G +S V+V 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVG 327

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T LVD Y KCG +E+A   F  +   N VSW+++I+ + + G  E+ ++IF  +  +GV 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +        ACA   +L  G   H    +  L + +   +++++MYSKC ++D A   
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +     V+W A+I GYA +G   EAL +F +M+S  ++P++ T ++V+ A +   ++
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 458 RYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
             AK ++ ++      +  +     +ID Y++ G +  A  L + M  E    +W  ++ 
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLG 567

Query: 516 GYGTH---GLGKAAVELFNKMLEGPT 538
           G   H    LGK A E   ++  G T
Sbjct: 568 GCWAHCDLKLGKIAAENLFRLDPGDT 593


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/740 (34%), Positives = 414/740 (55%), Gaps = 35/740 (4%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           +S + +    ++A RVF+ +P      Y+ M+ GY +    + A      M   D+  V 
Sbjct: 71  ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL--VS 128

Query: 139 YNYTYLLKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           +N      V   ++G+ R   EI  +        D+ +   +++ YA+ G +++A  +FD
Sbjct: 129 WNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQNGCVDDARSVFD 181

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RMPE++ VSWN +++ + QN   E A  L             ++   +L      G ++ 
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA----LVSWNCLLG-----GFVKK 232

Query: 258 GKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            K V     R  FDS+    V     ++  YA+ G+++ AR +FD    ++V +W +M++
Sbjct: 233 KKIVEA---RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y++    EEA  +F KM ++     N  +   +         ER     +L D +    
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG-------ERMEMAKELFDVMPC-R 341

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +VS  N++I+ Y++C K+  A ++F K+  +  VSW AMI GY+Q+G   EAL  F +M 
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            +  + +  +  S +   A++  +   K +H  +++  +E   FV  AL+ MY KCG++ 
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  LF  M  + + +WN MI GY  HG G+ A+  F  M     KP+D T +  +SACS
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GLV++G  YF ++ +DYG+ P   HY  MVDLLGRAG L +A + ++ MP EP   ++
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G +LGA ++H N EL E AA+++F ++P+  G +VLL+N+YA++  W  + K+R  M  K
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           G++K PG S +E++N+ H+F  G   HP+   I+ FLE L   +K AGYV  T+ + HDV
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  +E ++  HSE+LA+A+G++  S G  I + KNLRVC DCHNA KY++ +TGR II+
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFH FK+G CSCGDYW
Sbjct: 762 RDNNRFHHFKDGSCSCGDYW 781



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 241/477 (50%), Gaps = 32/477 (6%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L + R +  ++ +  +C  +     ++S + +   + DA  VF+ +P+K D  ++ +L 
Sbjct: 141 NLGKARELFEIMPERDVCSWNT----MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y + + +++A   L + R ++ A V +N       C   G +++ K +  +   +  ++
Sbjct: 197 AYVQNSKMEEAC-MLFKSR-ENWALVSWN-------CLLGGFVKKKKIVEARQFFDSMNV 247

Query: 172 -DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+ +   ++  YA+ G+I+EA ++FD  P +D+ +W  +V+G+ QN   E A +L  +M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV--NVST--ALVDMYAK 286
            E       ++  ++L        + + K +        FD +   NVST   ++  YA+
Sbjct: 308 PERNE----VSWNAMLAGYVQGERMEMAKEL--------FDVMPCRNVSTWNTMITGYAQ 355

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG++  A+ +FD M  R+ VSW +MIA Y + G+  EA+R+F +M  +G      +   A
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           L  CAD+  LE G  +H  L +    T   + N+L+ MY KC  ++ A D+F ++ GK +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHA 465
           VSWN MI GY+++G    AL +F  M+ + +KPD  TMV+V+ A +   ++ +  ++ + 
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
           +        N      ++D+  + G +  A  L  +M  E     W  ++     HG
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 51/368 (13%)

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++  WN  I++Y+  G   EA+R+F++M        N  I   L      G+ E      
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN----GEFE---LAR 115

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
           KL D++    D+   N +I  Y + + + +A ++F  +  + + SWN M+ GYAQNG V+
Sbjct: 116 KLFDEMP-ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           +A + F +M  KN      +  +++ A  + S +  A     ++ +S     +     L+
Sbjct: 175 DARSVFDRMPEKN----DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLL 226

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
             + K   +  AR  FD MN R V +WN +I GY   G    A +LF+   E P + +  
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD---ESPVQ-DVF 282

Query: 544 TFLCAISACSHSGLVEEGIHYFTSL------------------------KKDYGIEPVMD 579
           T+   +S    + +VEE    F  +                        K+ + + P  +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342

Query: 580 --HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
              +  M+    + G+++EA +   KMP    ++    + G  +   + E     A RLF
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE-----ALRLF 397

Query: 638 ELDPDEGG 645
                EGG
Sbjct: 398 VQMEREGG 405



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 136/345 (39%), Gaps = 81/345 (23%)

Query: 348 HACADLGDLERGIFVHKLLDQ----LKLG-TDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           H  A+   L+R         Q    LK G +D+   N  IS Y +  + + A  +F ++ 
Sbjct: 32  HGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP 91

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
             + VS+N MI GY +NG    A   F +M      P                       
Sbjct: 92  RWSSVSYNGMISGYLRNGEFELARKLFDEM------P----------------------- 122

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
                     E+++     +I  Y +   +G AR LF++M ER V +WN M+ GY  +G 
Sbjct: 123 ----------ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS--------------- 567
              A  +F++M E     ND+++   +SA   +  +EE    F S               
Sbjct: 173 VDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228

Query: 568 -LKKDYGIEP--------VMD--HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            +KK   +E         V D   +  ++    ++G+++EA     + P++   T + AM
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT-WTAM 287

Query: 617 LGACKIHKNVELGEKAANRLFELDPD--EGGYHVLLANIYAAASM 659
           +     ++ VE     A  LF+  P+  E  ++ +LA       M
Sbjct: 288 VSGYIQNRMVE----EARELFDKMPERNEVSWNAMLAGYVQGERM 328



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 18/246 (7%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           R+ R   +  L  C  +  L   +++   ++K G          L+ ++CK  S+ +A  
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ +  K    ++TM+ GY++    + A+ F   M+ + + P       +L  C   G 
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525

Query: 154 IRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
           + +G++    +  + G   +      +V++  + G +E+A+ +   MP E D   W T++
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585

Query: 212 AGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSILPAV---ANVGSLRIG------K 259
                +G    AE A D +  M  E   G ++ + ++  +     +VG LR+       K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPEN-SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644

Query: 260 AVHGYA 265
            V GY+
Sbjct: 645 KVPGYS 650


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/735 (35%), Positives = 398/735 (54%), Gaps = 63/735 (8%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLI--------------VNGFSL--------------- 171
           Y+  +K C  +G  R  K IHG +I              V+ ++L               
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 172 --DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV-T 228
             +LF+   ++  Y+K G + E  + F+++P+RD V+WN ++ G++ +G    A+    T
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M +       +T++++L   ++ G + +GK +HG  ++ GF+S + V + L+DMY+K G
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 289 RVETARLVFDGMKSRNVV------------------------------SWNSMIAAYVEG 318
            +  A+ VF G+  RN V                              SW++MI    + 
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQN 245

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  +EA+  F++M  +G++         L AC  LG +  G  +H  + +  L   + + 
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVG 305

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           ++LI MY KCK +  A  +F +++ K +VSW AM++GY Q GR  EA+  F  M+   I 
Sbjct: 306 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGID 365

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD +T+   I A A +S +      H   I +     + V  +L+ +Y KCG +  +  L
Sbjct: 366 PDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRL 425

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F+ MN R   +W  M+  Y   G    A++LF+KM++   KP+ +T    ISACS +GLV
Sbjct: 426 FNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV 485

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E+G  YF  +  +YGI P   HY  M+DL  R+GR+ EA  FI  MP  P    +  +L 
Sbjct: 486 EKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC+   N+E+G+ AA  L ELDP     + LL++IYA+   WD +A++R  M++K ++K 
Sbjct: 546 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKE 605

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
           PG S ++ K ++HSF +     P S +IY  LE L  +I   GY PDT+ + HDVE+ V+
Sbjct: 606 PGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVK 665

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
             +L+ HSE+LAIAFGL+    G  I + KNLRVC DCHNATK+IS VTGREI+VRD  R
Sbjct: 666 IKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 725

Query: 798 FHCFKNGVCSCGDYW 812
           FH FK+G CSCGD+W
Sbjct: 726 FHRFKDGTCSCGDFW 740



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 263/558 (47%), Gaps = 49/558 (8%)

Query: 37  RIYRHPSALLLEVCTSLKELRR--ILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAAR 93
           R   HP   L         L R  I    +  G+   +LF    L+  + K   LS+  R
Sbjct: 31  RTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMER 90

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV-YNYTYLLKVCGDVG 152
            FE +PD+    ++ +++GY+    +  AV     M  D  + +       +LK+    G
Sbjct: 91  TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNG 150

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK--------------------------- 185
            +  GK+IHGQ+I  GF   L   + +++MY+K                           
Sbjct: 151 HVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMG 210

Query: 186 ----CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
               CG IE+A ++F  M E+D VSW+ ++ G AQNG  + A++    M  EG + D   
Sbjct: 211 GLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYP 269

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             S+LPA   +G++  G+ +H   +R      + V +AL+DMY KC  +  A+ VFD MK
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            +NVVSW +M+  Y + G   EA++IF  M   G++P + T+ +A+ ACA++  LE G  
Sbjct: 330 QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQ 389

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
            H       L   ++++NSL+++Y KC  +D +  +F+++  +  VSW AM+  YAQ GR
Sbjct: 390 FHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGR 449

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV--- 478
             EA+  F KM    +KPD  T+  VI A +   ++   +    L+I    E  +     
Sbjct: 450 AVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN---EYGIVPSNG 506

Query: 479 -MTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG---LGKAAVELFNKM 533
             + +ID++++ G +  A    + M  R     W  ++      G   +GK A E   ++
Sbjct: 507 HYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 566

Query: 534 LEGPTKPNDITFLCAISA 551
              P  P   T L +I A
Sbjct: 567 --DPHHPAGYTLLSSIYA 582



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 157/334 (47%), Gaps = 10/334 (2%)

Query: 37  RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
           ++ ++P   +L  C  L  +   R+I   II++ L D     + L+ ++CK   L  A  
Sbjct: 264 KMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKT 323

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF+ +  K    +  M+ GY +     +AV   + M+   + P  Y     +  C ++  
Sbjct: 324 VFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISS 383

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +  G + HG+ I  G    +     +V +Y KCG I+++ ++F+ M  RD VSW  +V+ 
Sbjct: 384 LEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSA 443

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDS 272
           +AQ G A  A+ L  +M + G + D +T+  ++ A +  G +  G+      +   G   
Sbjct: 444 YAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVP 503

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
                + ++D++++ GR+E A    +GM  R + + W ++++A    GN E      + +
Sbjct: 504 SNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESL 563

Query: 332 LD-QGVEPTNVTIMEALHACADLGD----LERGI 360
           ++     P   T++ +++A     D    L RG+
Sbjct: 564 IELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGM 597


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/733 (34%), Positives = 404/733 (55%), Gaps = 2/733 (0%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
           + K  +LS A  +F+ +  +    +  ++ GYA+     +A +    M    + P     
Sbjct: 83  YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
             LL    +   +    ++HG ++  G+   L     +++ Y K   +  A  +F  M E
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +D V++N ++ G+++ GF   A++L  +M + G R    T  ++L A   +  +  G+ V
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H + ++  F   V V+ AL+D Y+K  R+  AR +F  M   + +S+N +I      G  
Sbjct: 263 HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRV 322

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EE++ +F+++     +         L   A+  +LE G  +H         ++V + NSL
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + MY+KC K   A  IF+ L  ++ V W A+I GY Q G   + L  F +M    I  DS
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T  S++ A A L+ +   K +H+ +IRS    NVF  +AL+DMYAKCG++  A  +F  
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  R+  +WN +I  Y  +G G  A+  F +M+    +PN ++FL  + ACSH GLVEEG
Sbjct: 503 MPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEG 562

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           + YF S+ + Y +EP  +HY +MVD+L R+GR +EA   + +MP EP   ++ ++L +C+
Sbjct: 563 LQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCR 622

Query: 622 IHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           IHKN EL  KAA++LF +    +   +V ++NIYAAA  WD + KV+  + ++G++K P 
Sbjct: 623 IHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPA 682

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNSIHDVEDYVQEN 739
            S VE+K + H F +  T HPQ+K I   L+ L  +++  GY PD T ++H+V++ V+  
Sbjct: 683 YSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVE 742

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L  HSE++AIAF L+++  GS I + KNLR C DCH A K IS +  REI VRD  RFH
Sbjct: 743 SLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFH 802

Query: 800 CFKNGVCSCGDYW 812
            F +G CSC DYW
Sbjct: 803 HFTDGSCSCKDYW 815



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 244/489 (49%), Gaps = 12/489 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S+ E+ ++   ++K G     +    L+  +CK  SL  A  +F+ + +K +  ++ +L 
Sbjct: 154 SVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLT 213

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY+K     DA++   +M+     P  + +  +L     + +I  G+++H  ++   F  
Sbjct: 214 GYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVW 273

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F    +++ Y+K  +I EA K+F  MPE D +S+N ++   A NG  E +L+L   + 
Sbjct: 274 NVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQ 333

Query: 232 ---EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
               + R+  F T++SI    AN  +L +G+ +H  A+     S V V  +LVDMYAKC 
Sbjct: 334 FTRFDRRQFPFATLLSI---AANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD 390

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           +   A  +F  +  ++ V W ++I+ YV+ G  E+ +++F +M    +   + T    L 
Sbjct: 391 KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILR 450

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           ACA+L  L  G  +H  + +    ++V   ++L+ MY+KC  +  A  +F ++  +  VS
Sbjct: 451 ACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVS 510

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           WNA+I  YAQNG    AL  F +M    ++P+S + +S++ A +   ++    ++ +++ 
Sbjct: 511 WNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMT 570

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLG--- 523
                E       +++DM  + G    A  L   M  E     W+ +++    H      
Sbjct: 571 QVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELA 630

Query: 524 -KAAVELFN 531
            KAA +LFN
Sbjct: 631 IKAADQLFN 639



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 222/497 (44%), Gaps = 35/497 (7%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-------------- 200
           R  + +   +I  GF  +       V  + + G +  A K+FD MP              
Sbjct: 24  RHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGY 83

Query: 201 -----------------ERDLVSWNTIVAGFAQ-NGFAELALDLVTRMHEEGRRGDFITI 242
                            +R +V+W  ++ G+AQ N F E A +L   M   G   D IT+
Sbjct: 84  LKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLE-AFNLFADMCRHGMVPDHITL 142

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            ++L       S+     VHG+ ++ G+DS + V  +L+D Y K   +  A  +F  M  
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++ V++N+++  Y + G   +A+ +F KM D G  P+  T    L A   + D+E G  V
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + +     +V + N+L+  YSK  ++  A  +F ++     +S+N +I   A NGRV
Sbjct: 263 HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRV 322

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            E+L  F +++        F   +++   A    +   + IH+  I +     V V  +L
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           +DMYAKC   G A  +F  +  +    W  +I GY   GL +  ++LF +M       + 
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            T+   + AC++   +  G    + + +   +  V     A+VD+  + G + EA    Q
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCGSIKEALQMFQ 501

Query: 603 KMPIEPGITVFGAMLGA 619
           +MP+   ++ + A++ A
Sbjct: 502 EMPVRNSVS-WNALISA 517



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 214/499 (42%), Gaps = 79/499 (15%)

Query: 251 NVGSL----RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           N+G+L    R  + V    ++ GFD         V  + + G +  AR +FD M  +NV+
Sbjct: 15  NLGTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVI 74

Query: 307 SWNSMIAAYVEGGNPE-------------------------------EAMRIFQKMLDQG 335
           S N+MI  Y++ GN                                 EA  +F  M   G
Sbjct: 75  STNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHG 134

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           + P ++T+   L    +   +     VH  + ++   + + + NSL+  Y K + +  A 
Sbjct: 135 MVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLAC 194

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F  +  K  V++NA++ GY++ G  ++A+N F KM+    +P  FT  +V+ A  ++ 
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD 254

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            I + + +H+ V++  F  NVFV  AL+D Y+K   +  AR LF  M E    ++NV+I 
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLIT 314

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
               +G  + ++ELF ++           F   +S  ++S  +E G    +       I 
Sbjct: 315 CCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAIS 374

Query: 576 PVM------DHYGAMVDLLGRAGRL--------NEAWD-----FIQKMPIEPGITVF--- 613
            V+      D Y A  D  G A R+        +  W      ++QK   E G+ +F   
Sbjct: 375 EVLVGNSLVDMY-AKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEM 433

Query: 614 ------------GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
                        ++L AC    ++ LG++  +R+             L+N+++ +++ D
Sbjct: 434 HRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSG--------CLSNVFSGSALVD 485

Query: 662 KLAKVRTIMEK-KGLQKTP 679
             AK  +I E  +  Q+ P
Sbjct: 486 MYAKCGSIKEALQMFQEMP 504



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 21/305 (6%)

Query: 42  PSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A LL +  +   L+  R+I    I +    + L    LV ++ K +   +A R+F  +
Sbjct: 343 PFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADL 402

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             +    +  ++ GY +    +D +   + M    +      Y  +L+ C ++  +  GK
Sbjct: 403 AHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGK 462

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H ++I +G   ++F+ + +V+MYAKCG I+EA +MF  MP R+ VSWN +++ +AQNG
Sbjct: 463 QLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNG 522

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV-- 276
               AL    +M   G + + ++ +SIL A ++ G +  G           F+S+  V  
Sbjct: 523 DGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQY--------FNSMTQVYK 574

Query: 277 -------STALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                    ++VDM  + GR + A  +   M    + + W+S++ +     N E A++  
Sbjct: 575 LEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAA 634

Query: 329 QKMLD 333
            ++ +
Sbjct: 635 DQLFN 639


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/697 (35%), Positives = 397/697 (56%), Gaps = 3/697 (0%)

Query: 40  RHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           R   A++L+ C +L+E     ++  L++K G     +  + L+ ++ K   L D+  VF 
Sbjct: 181 RASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFS 240

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            +P+K    +  M+ G  +     + +     M+   V      Y  L + C  +  +R 
Sbjct: 241 ELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRL 300

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GKE+H   + + F  D+   T  ++MYAKCG++ +A K+   MP+  L S+N I+ G+A+
Sbjct: 301 GKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR 360

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +     AL     + + G   D IT+   L A A++     G+ VHG A+++   S + V
Sbjct: 361 SDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICV 420

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           + A++DMY KC  +  A  +FD M+ R+ VSWN++IAA  + GN EE +  F  M+   +
Sbjct: 421 ANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRM 480

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           EP + T    L ACA    L  G+ +H  + +  +G D  +  +L+ MY KC  +++A  
Sbjct: 481 EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADK 540

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           I  + + KT+VSWNA+I G++   +  +A  +F +M    + PD+FT  +V+   A L+ 
Sbjct: 541 IHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLAT 600

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   K IHA +I+   + +V++ + L+DMY+KCG +  ++ +F+    R   TWN M+ G
Sbjct: 601 VGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCG 660

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  HGLG+ A++LF  M     KPN  TF+  + AC+H GLV++G+HYF  +  +YG++P
Sbjct: 661 YAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDP 720

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
             +HY  MVD+LGR+GR++EA + +QKMP E    ++  +L  CKIH NVE+ EKA   L
Sbjct: 721 QSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRAL 780

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            +LDP +    VLL+NIYA A MW  ++++R +M    L+K PGCS +ELK+EVH+F  G
Sbjct: 781 LQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVG 840

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVE 733
              HP+ + IY  L  LI E+++ GY+PD + + D E
Sbjct: 841 DKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLLDEE 877



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 260/547 (47%), Gaps = 37/547 (6%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS--------------------------- 170
           +  ++++ + C     +  GK+ H ++I  GF                            
Sbjct: 49  IRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFD 108

Query: 171 ----LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
                D+ +   +++ YA CG+++ A K F  MPERD+VSWN++++GF QNG    ++D+
Sbjct: 109 KMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDV 168

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M   G   D  ++  +L A   +    +G  VHG  ++ GFD  V   +AL+ MYAK
Sbjct: 169 FLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAK 228

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           C R++ +  VF  +  +N VSW++MIA  V+     E + +F++M   GV  +       
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
             +CA L  L  G  +H    +   G+D+ +  + + MY+KC ++  A  + S +   +L
Sbjct: 289 FRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            S+NA+I+GYA++ R  +AL  F  +    +  D  T+   + A A +      + +H L
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGL 408

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
            ++S    N+ V  A++DMY KC A+  A  LFDMM  R   +WN +I     +G  +  
Sbjct: 409 AVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEET 468

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMV 585
           +  F  M+    +P+D T+   + AC+    +  G+   T  +K   G +  +    A+V
Sbjct: 469 LAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AALV 526

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL--DPDE 643
           D+  + G + +A D I     +  +  + A++    + +  E   K  +R+ E+  +PD 
Sbjct: 527 DMYCKCGMIEKA-DKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDN 585

Query: 644 GGYHVLL 650
             Y  +L
Sbjct: 586 FTYAAVL 592


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/701 (35%), Positives = 399/701 (56%), Gaps = 48/701 (6%)

Query: 160  IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            +H   + NG    L     ++ +YAK   +  A K+FD +P+R+  +W  +++GFA+ G 
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 220  AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            +E+  +L   M  +G   +  T+ S+L   +   +L++GK VH + +R G D  V +  +
Sbjct: 371  SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 280  LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK--------- 330
            ++D+Y KC   E A  +F+ M   +VVSWN MI AY+  G+ E+++ +F++         
Sbjct: 431  ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 331  ----------------------MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
                                  M++ G E + VT   AL   + L  +E G  +H ++ +
Sbjct: 491  NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 369  LKLGTDVSMTNSLISMYSKCKKVDRAA--------DIFSKLQGKT--------LVSWNAM 412
                +D  + +SL+ MY KC ++D+A+        D+  K   +         +VSW +M
Sbjct: 551  FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 413  ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
            + GY  NG+  + L  F  M  + +  D  T+ ++I A A   ++ + + +HA V +   
Sbjct: 611  VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
              + +V ++LIDMY+K G++  A  +F   NE ++  W  MI GY  HG G  A+ LF +
Sbjct: 671  RIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730

Query: 533  MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
            ML     PN++TFL  ++ACSH+GL+EEG  YF  +K  Y I P ++H  +MVDL GRAG
Sbjct: 731  MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAG 790

Query: 593  RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
             L +  +FI K  I    +V+ + L +C++HKNVE+G+  +  L ++ P + G +VLL+N
Sbjct: 791  HLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSN 850

Query: 653  IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
            + A+   WD+ A+VR++M ++G++K PG S ++LK+++H+F  G   HPQ   IY++L+ 
Sbjct: 851  MCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDI 910

Query: 713  LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
            LI  +K  GY  D   +  DVE+   E L+S HSEKLA+ FG++N++  + I I KNLR+
Sbjct: 911  LIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRI 970

Query: 772  CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            C DCHN  KY S +  REIIVRD+HRFH FK+G CSCGDYW
Sbjct: 971  CTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 246/529 (46%), Gaps = 54/529 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++L+ K N+++ A ++F+ IP +    +  ++ G+A+  S +   +    M+     P 
Sbjct: 330 LLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPN 389

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y  + +LK C     ++ GK +H  ++ NG  +D+     ++++Y KC   E A ++F+
Sbjct: 390 QYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE 449

Query: 198 RMPERDLVS-------------------------------WNTIVAGFAQNGFAELALDL 226
            M E D+VS                               WNTIV G  Q G+   AL+ 
Sbjct: 450 LMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQ 509

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
           +  M E G     +T    L   +++  + +G+ +HG  ++ GFDS   + ++LV+MY K
Sbjct: 510 LYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCK 569

Query: 287 CGRVETARLV-----FDGMKSRN-----------VVSWNSMIAAYVEGGNPEEAMRIFQK 330
           CGR++ A ++      D ++  N           +VSW SM++ YV  G  E+ ++ F+ 
Sbjct: 570 CGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRL 629

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+ + V     T+   + ACA+ G LE G  VH  + ++    D  + +SLI MYSK   
Sbjct: 630 MVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGS 689

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +D A  +F +     +V W +MI GYA +G+   A+  F +M ++ I P+  T + V+ A
Sbjct: 690 LDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNA 749

Query: 451 LAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
            +   +I    ++   +    C    V   T+++D+Y + G +   +         H+T+
Sbjct: 750 CSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTS 809

Query: 510 -WNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
            W   +     H    +GK   E+  ++   P+ P     L  + A +H
Sbjct: 810 VWKSFLSSCRLHKNVEMGKWVSEMLLQV--APSDPGAYVLLSNMCASNH 856



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 52/388 (13%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++++G+    +    ++ L+ K      A R+FE + +     ++ M+  Y +   ++ +
Sbjct: 416 MLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKS 475

Query: 123 VSFLIRMRYDDVAPVVYNYT-----------------YLLKVCG---------------- 149
           +    R+ Y DV  V +N                   Y +  CG                
Sbjct: 476 LDMFRRLPYKDV--VSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILAS 533

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD------------ 197
            +  +  G+++HG ++  GF  D F  + +V MY KCG++++A  +              
Sbjct: 534 SLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNA 593

Query: 198 ----RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
               + P+  +VSW ++V+G+  NG  E  L     M  E    D  T+ +I+ A AN G
Sbjct: 594 RVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAG 653

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  G+ VH Y  + G      V ++L+DMY+K G ++ A +VF      N+V W SMI+
Sbjct: 654 ILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMIS 713

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLG 372
            Y   G    A+ +F++ML+QG+ P  VT +  L+AC+  G +E G    +++ D   + 
Sbjct: 714 GYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCIN 773

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSK 400
             V    S++ +Y +   + +  +   K
Sbjct: 774 PGVEHCTSMVDLYGRAGHLTKTKNFIFK 801


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 366/602 (60%), Gaps = 7/602 (1%)

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           A F        A+  +  M   G   D IT   ++   +  G+++ GK VH +    G++
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             + V   L++MY K   +E A  +FD M  RNVVSW +MI+AY    N ++A++    M
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILM 146

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
             +GV P   T    L AC  L +L +   +H  + +  L +DV + ++LI +YSK   +
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDL 203

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           D A  +F ++  + LV WN++I G+AQN   NEALN F +M+      D  T+ SV+ A 
Sbjct: 204 DNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRAC 263

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
             L+++   + +H  V++  F++++ +  ALIDMY KCG++  A + F  M E+ V +W+
Sbjct: 264 TGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWS 321

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            M+ G   +G  + A+ELF  M E  ++PN IT L  + ACSH+GLVE+G +YF S+KK 
Sbjct: 322 TMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL 381

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           +G++P  +HYG ++DLLGRAGRL+EA   I +M  EP    +  +LGAC++H+NV+L   
Sbjct: 382 FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIY 441

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA ++ EL+P++ G ++LL+NIYA    W+ +A+VR  M  +G++KTPGCS +E+  ++H
Sbjct: 442 AAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIH 501

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
            F  G T HP+ + I   L  LI+ +   GYVPDTN +  D+E   +E+ L  HSEKLAI
Sbjct: 502 VFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAI 561

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
            FGL+N S   T+ IRKNLR+CGDCH   K +S +  R I++RD  R+H F++GVCSCGD
Sbjct: 562 MFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGD 621

Query: 811 YW 812
           YW
Sbjct: 622 YW 623



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 209/405 (51%), Gaps = 12/405 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ L+K C   G ++ GK +H  +   G+   +F +  ++NMY K   +EEA  +FD MP
Sbjct: 58  YSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMP 117

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++VSW T+++ ++ N   + AL  +  M  EG R +  T  S+L A   + +LR    
Sbjct: 118 ERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---Q 173

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   ++ G +S V V +AL+D+Y+K   ++ A  VFD M +R++V WNS+I  + +  +
Sbjct: 174 LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSD 233

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA+ +F++M   G      T+   L AC  L  LE G  VH  +  LK   D+ + N+
Sbjct: 234 GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH--VHVLKFDQDLILNNA 291

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY KC  ++ A   FS++  K ++SW+ M+ G AQNG   +AL  F  M+    +P+
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTA-RA 497
             T++ V+ A +   ++    W +   ++  F  +        LID+  + G +  A + 
Sbjct: 352 YITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           + +M  E    TW  ++     H     A+    K++E   +P D
Sbjct: 411 IHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE--LEPED 453



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 204/374 (54%), Gaps = 13/374 (3%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L++ C++   ++E +R+   I   G   +      L++++ K+N L +A  +F+ +P++ 
Sbjct: 61  LIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERN 120

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + TM+  Y+   + D A+  LI M  + V P ++ Y+ +L+ C  +  +R   ++H 
Sbjct: 121 VVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHC 176

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  G   D+F  + ++++Y+K   ++ A  +FD MP RDLV WN+I+ GFAQN     
Sbjct: 177 GIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNE 236

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL+L  RM   G   D  T+ S+L A   +  L +G+ VH + ++  FD  + ++ AL+D
Sbjct: 237 ALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALID 294

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG +E A   F  M  ++V+SW++M+A   + G   +A+ +F+ M + G  P  +T
Sbjct: 295 MYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYIT 354

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSK 400
           ++  L AC+  G +E+G +  + + +L  G D    +   LI +  +  ++D A  +  +
Sbjct: 355 VLGVLFACSHAGLVEKGWYYFRSMKKL-FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHE 413

Query: 401 LQGKT-LVSWNAMI 413
           ++ +   V+W  ++
Sbjct: 414 MECEPDSVTWRTLL 427


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/707 (37%), Positives = 401/707 (56%), Gaps = 66/707 (9%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           ++L  + K   +D A  F   + + DV    + +  ++      GE ++  +    + ++
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDV----FMWNIMVSGYTSKGEFKKALKCISDMKLS 285

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-----ERDLVSWNTIVAGFAQNGFAEL 222
           G   D      +++ YA+ GQ EEA K F  M      + ++VSW  ++AG  QNG+   
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALV 281
           AL +  +M  EG + + ITI S + A  N+  LR G+ +HGY ++    DS + V  +LV
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI-------------- 327
           D YAKC  VE AR  F  +K  ++VSWN+M+A Y   G+ EEA+ +              
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465

Query: 328 ---------------------FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK-- 364
                                FQ+M   G++P   TI  AL AC  + +L+ G  +H   
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L + ++L T V   ++LISMYS C  ++ A  +FS+L  + +V WN++I   AQ+GR   
Sbjct: 526 LRNHIELSTGVG--SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL+   +M   N++ ++ TMVS +PA ++L+ +R  K IH  +IR   +   F++ +LID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY +CG++  +R +FD+M +R + +WNVMI  YG HG G  AV LF        KPN IT
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHIT 703

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F   +SACSHSGL+EEG  YF  +K +Y ++P ++ Y  MVDLL RAG+ NE  +FI+KM
Sbjct: 704 FTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 763

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P EP   V+G++LGAC+IH N +L E AA  LFEL+P   G +VL+ANIY+AA  W+  A
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAA 823

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           K+R +M+++G+ K PGCS +E+K ++HSF  G T HP           L+++I       
Sbjct: 824 KIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP-----------LMEQISG----- 867

Query: 725 DTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
             +   DV++  +E  L  HSEK+A+AFGL++++ G+ + I KNLRV
Sbjct: 868 -KDGKLDVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 245/522 (46%), Gaps = 80/522 (15%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           L++A   L  M   +    +  Y  +L+ C  +  +R G ++H QL+VNG  +  F  + 
Sbjct: 70  LNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSR 129

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           ++ +Y + G +E+A +MFD+M ER++ SW  I+  +   G  E  + L   M  EG R D
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
                 +  A + + + R+GK V+ Y +  GF+    V  +++DM+ KCGR++ AR  F+
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            ++ ++V  WN M++ Y   G  ++A++    M   GV+P  VT                
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT---------------- 293

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-----KTLVSWNAMI 413
                               N++IS Y++  + + A+  F ++ G       +VSW A+I
Sbjct: 294 -------------------WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCF 472
            G  QNG   EAL+ F KM  + +KP+S T+ S + A   LS++R+ + IH   I+    
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           + ++ V  +L+D YAKC +V  AR  F M+ +  + +WN M+ GY   G  + A+EL ++
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M                                    K  GIEP +  +  +V    + G
Sbjct: 455 M------------------------------------KFQGIEPDIITWNGLVTGFTQYG 478

Query: 593 RLNEAWDFIQK---MPIEPGITVFGAMLGACKIHKNVELGEK 631
               A +F Q+   M ++P  T     L AC   +N++LG++
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 160/666 (24%), Positives = 301/666 (45%), Gaps = 97/666 (14%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C  L  LR   ++   ++ +G+       ++L+ ++C+   + DA R+F+ + +
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  +++ Y      ++ +     M  + V P  + +  + K C ++   R GK++
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           +  ++  GF  +      +++M+ KCG+++ A + F+ +  +D+  WN +V+G+   G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + AL  ++ M   G + D +T                                     A+
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 281 VDMYAKCGRVETARLVF---DGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +  YA+ G+ E A   F    G+K    NVVSW ++IA   + G   EA+ +F+KM+ +G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGTDVSMTNSLISMYSKCKKVDRA 394
           V+P ++TI  A+ AC +L  L  G  +H    ++ +L +D+ + NSL+  Y+KC+ V+ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNE------------------------------ 424
              F  ++   LVSWNAM+ GYA  G   E                              
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 425 -----ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
                AL +F +M S  + P++ T+   + A  ++  ++  K IH  V+R+  E +  V 
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +ALI MY+ C ++  A ++F  ++ R V  WN +I      G    A++L  +M     +
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            N +T + A+ ACS    + +G  IH F       G++       +++D+ GR G + ++
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKS 654

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN-----RLFELDPDEGGYHVLLAN 652
                 MP +  +  +  M+    +H     G  A N     R   L P+    H+   N
Sbjct: 655 RRIFDLMP-QRDLVSWNVMISVYGMHG---FGMDAVNLFQXFRTMGLKPN----HITFTN 706

Query: 653 IYAAAS 658
           + +A S
Sbjct: 707 LLSACS 712



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 172/380 (45%), Gaps = 36/380 (9%)

Query: 299 GMKSRNVVSWNS-MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           G   RN V  N+ M+ + ++  NP+E + I+  +L +               C  L +L 
Sbjct: 62  GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQK---------------CRKLYNLR 106

Query: 358 RGIFVHKLLDQLKLGTDVS--MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            G  VH  L  +  G DV   + + L+ +Y +   V+ A  +F K+  + + SW A++  
Sbjct: 107 LGFQVHAQL--VVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y   G   E +  F  M ++ ++PD F    V  A +EL   R  K ++  ++   FE N
Sbjct: 165 YCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGN 224

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             V  +++DM+ KCG +  AR  F+ +  + V  WN+M+ GY + G  K A++  + M  
Sbjct: 225 SCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKL 284

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              KP+ +T+   IS  + SG  EE   YF  +      +P +  + A++    + G   
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDF 344

Query: 596 EAWDFIQKMPIE---PGITVFGAMLGACKIHKNVELGEKAAN---RLFELDPDEGGYHVL 649
           EA    +KM +E   P      + + AC     +  G +      ++ ELD D     +L
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD-----LL 399

Query: 650 LANIYAAASMWDKLAKVRTI 669
           + N     S+ D  AK R++
Sbjct: 400 VGN-----SLVDYYAKCRSV 414


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/675 (36%), Positives = 388/675 (57%), Gaps = 8/675 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           LLKV  D   ++ G+ IH  L +   +     +  +  ++N+Y KC ++  A K+FD MP
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI--G 258
            R++VSW+ ++AG+ QNG      +L  +M    +   F     I  A+++  S     G
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKM--VVKDNIFPNEYVIATAISSCDSQMYVEG 142

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K  HGYA+++G +    V  AL+ +Y+KC  V  A  +   +   ++  +N ++   ++ 
Sbjct: 143 KQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQH 202

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            +  EA+ + + ++ +G+E  N T +     CA L D+  G  VH  + +  +  DV + 
Sbjct: 203 THMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIG 262

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           +S+I MY KC  V      F +LQ + +VSW ++I  Y QN    EALN F KM    I 
Sbjct: 263 SSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIP 322

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           P+ +TM  +  + A LS +     +HA   +S  + NV V  ALI MY K G +  A+++
Sbjct: 323 PNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSV 382

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M   ++ TWN +I G+  HGLGK A+ +F  M+    +PN +TF+  I AC+H  LV
Sbjct: 383 FSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLV 442

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           +EG +YF  L K + I P ++HY  +V LL R+GRL+EA +F++   I   +  +  +L 
Sbjct: 443 DEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLN 502

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
           AC +HK+ + G K A  L +L+P + G ++LL+N++A    WD + ++R +M ++ ++K 
Sbjct: 503 ACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKE 562

Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQ 737
           PG S +E++N  H F S   KHP++  IY  ++ L+ +I+  GYVPD  N +HD+ED  +
Sbjct: 563 PGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQK 622

Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
            + LS HSEKLA+A+GL+ +  G+ I + KNLR+C DCH A K IS V  R I+VRD +R
Sbjct: 623 VDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANR 682

Query: 798 FHCFKNGVCSCGDYW 812
           FH F+NG CSCGDYW
Sbjct: 683 FHHFQNGCCSCGDYW 697



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 208/422 (49%), Gaps = 21/422 (4%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +KSGL      +  L+ L+ K + +  A ++   +P      Y+ ++ G  +   + +AV
Sbjct: 150 LKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAV 209

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
             L  +  + +      Y  + ++C  + +I  GK++H Q++ +    D++  + +++MY
Sbjct: 210 DVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMY 269

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            KCG +      FDR+  R++VSW +I+A + QN F E AL+L ++M  +    +  T+ 
Sbjct: 270 GKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMA 329

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
            +  + A + +L +G  +H  A ++G    V V  AL+ MY K G +  A+ VF  M   
Sbjct: 330 VLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCC 389

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FV 362
           N+++WN++I  +   G  +EA+ +FQ M+  G  P  VT +  + ACA L  ++ G  + 
Sbjct: 390 NIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYF 449

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG------ 415
           + L+ Q ++   +     ++ + S+  ++D A +     Q    +VSW  ++        
Sbjct: 450 NHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKH 509

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF-EK 474
           Y +  ++ E   Y  ++  +++   ++ ++S + A       R  +W H + IR    E+
Sbjct: 510 YDKGRKIAE---YLLQLEPRDV--GTYILLSNMHA-------RVRRWDHVVEIRKLMRER 557

Query: 475 NV 476
           NV
Sbjct: 558 NV 559



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 152/317 (47%), Gaps = 20/317 (6%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +  +C SLK++   +++   ++KS + CD ++  + ++ ++ K  ++      F+ +  +
Sbjct: 230 IFRLCASLKDITLGKQVHAQMLKSDIDCDVYI-GSSIIDMYGKCGNVLSGRTFFDRLQSR 288

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               + +++  Y +    ++A++   +M  D + P  Y    L      +  +  G ++H
Sbjct: 289 NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLH 348

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            +   +G   ++     ++ MY K G I  A  +F  M   ++++WN I+ G + +G  +
Sbjct: 349 ARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGK 408

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TA 279
            AL +   M   G R +++T + ++ A A++  +  G     + M+  F  +  +   T 
Sbjct: 409 EALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQ-FRIVPGLEHYTC 467

Query: 280 LVDMYAKCGRVETARLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           +V + ++ GR++ A    + M+S     +VVSW +++ A     + ++  +I + +L   
Sbjct: 468 IVGLLSRSGRLDEAE---NFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQ-- 522

Query: 336 VEPTNV---TIMEALHA 349
           +EP +V    ++  +HA
Sbjct: 523 LEPRDVGTYILLSNMHA 539


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 402/683 (58%), Gaps = 7/683 (1%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D     + ++ LL+ C D   I   K I  Q++ +GF ++L + + +V+   KCG+I  A
Sbjct: 42  DSLTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVEL-SGSKLVDASLKCGEIGYA 100

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            ++FD MPER +V+WN+I+A + ++  ++ A+++   M       D  T+ S+  A +++
Sbjct: 101 RQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDL 160

Query: 253 GSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
              +  +  HG A+  G + S V V +ALVDMY K G+   A+LV D ++ ++VV   ++
Sbjct: 161 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 220

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y + G   EA++ FQ ML + V+P   T    L +C +L D+  G  +H L+ +   
Sbjct: 221 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 280

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            + ++   SL++MY +C  VD +  +F  ++    V+W ++I G  QNGR   AL  F K
Sbjct: 281 ESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRK 340

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M   ++KP+SFT+ S +   + L++    + +H +V +  F+++ +  + LI++Y KCG 
Sbjct: 341 MMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGC 400

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              AR +FD ++E  V + N MI  Y  +G G+ A+ELF +M+    +PND+T L  + A
Sbjct: 401 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLA 460

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           C++SGLVEEG   F S +KD  I    DHY  MVD+LGRAGRL EA   I ++   P + 
Sbjct: 461 CNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLV 518

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           ++  +L ACK+H+ VE+ E+   ++ E+ P + G  +LL+N+YA+   W ++ ++++ M+
Sbjct: 519 LWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMK 578

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
           +  L+K P  S VE+  E H+F +G    HP S++I   LE LI + K  GYV D + + 
Sbjct: 579 EMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVF 638

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            D+E+  +E  L  HSEKLAIAF +  +  GS I I KNLRVC DCH+  K +S +  RE
Sbjct: 639 QDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRIIKRE 697

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II RD  RFH F++G CSCGDYW
Sbjct: 698 IICRDSKRFHHFRDGSCSCGDYW 720



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 257/543 (47%), Gaps = 33/543 (6%)

Query: 1   MSSHSQCQLSVFTNSTPTQTLHEHKHTLSQ--RAYIPSRIYRHPSALLLEVCTSLKELRR 58
           +S +SQ +L   T  + T T     HT SQ  R  I  R              S+  ++ 
Sbjct: 28  LSINSQFRLLCITCDSLTTT-----HTFSQLLRQCIDER--------------SISGIKN 68

Query: 59  ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFAS 118
           I   ++KSG     L  +KLV    K   +  A ++F+ +P++    +++++  Y K   
Sbjct: 69  IQAQMLKSGF-PVELSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRR 127

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMT 177
             +AV     M  ++V P  Y  + + K   D+   +  +  HG  ++ G  + ++F  +
Sbjct: 128 SKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGS 187

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +V+MY K G+  EA  + DR+ E+D+V    ++ G++Q G    A+     M  E  + 
Sbjct: 188 ALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 247

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           +  T  S+L +  N+  +  GK +HG  +++GF+S +   T+L+ MY +C  V+ + LVF
Sbjct: 248 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVF 307

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
             +K  N V+W S+I+  V+ G  E A+  F+KM+   V+P + T+  AL  C++L   E
Sbjct: 308 KCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFE 367

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  VH ++ +     D    + LI +Y KC   D A  +F  L    ++S N MI  YA
Sbjct: 368 EGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 427

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           QNG   EAL  F +M +  ++P+  T++SV+ A     ++          +   F K+  
Sbjct: 428 QNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVE-----EGCELFDSFRKDKI 482

Query: 478 VMT-----ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           ++T      ++DM  + G +  A  L   +    +  W  ++     H   + A  +  K
Sbjct: 483 MLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRK 542

Query: 533 MLE 535
           +LE
Sbjct: 543 ILE 545


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/708 (35%), Positives = 393/708 (55%), Gaps = 37/708 (5%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRM 199
           T +L+         + K+IH  ++      D +  + ++  YA   C  +  A  +F+++
Sbjct: 73  TNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQI 132

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIG 258
           P+ +L  WNT++ G+A +     +  +   M H      +  T   +  A + +  L +G
Sbjct: 133 PQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLG 192

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
             +HG  ++A   S + +  +L++ Y   G  + A  VF  M  ++VVSWN+MI A+  G
Sbjct: 193 SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALG 252

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G P++A+ +FQ+M  + V+P  +T++  L ACA   DLE G ++   ++       + + 
Sbjct: 253 GLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN 312

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSW----------------------------- 409
           N+++ MY KC  ++ A D+F+K+  K +VSW                             
Sbjct: 313 NAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA 372

Query: 410 --NAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
             NA+I  Y QNG+   AL+ F +M+ SK+ KPD  T++  + A A+L  I +  WIH  
Sbjct: 373 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 432

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           + +     N  + T+L+DMYAKCG +  A  +F  +  + V  W+ MI     +G GKAA
Sbjct: 433 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAA 492

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           ++LF+ MLE   KPN +TF   + AC+H+GLV EG   F  ++  YGI P + HY  +VD
Sbjct: 493 LDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVD 552

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           + GRAG L +A  FI+KMPI P   V+GA+LGAC  H NVEL E A   L EL+P   G 
Sbjct: 553 IFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGA 612

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
            VLL+NIYA A  W+K++ +R +M    ++K P CS +++   VH F  G   HP S++I
Sbjct: 613 FVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKI 672

Query: 707 YTFLETLIDEIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           Y+ L+ + ++ K  GY PD +++  +  ED + E  L+ HSEKLAIAFGL++++    I 
Sbjct: 673 YSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIR 732

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KN+R+CGDCH   K +S +  R+I++RD +RFH F+ G CSC DYW
Sbjct: 733 IVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 272/593 (45%), Gaps = 92/593 (15%)

Query: 46  LLEVCTSLKELRRILPLIIK-SGLCDQHLFQTKLVSLFC--KYNSLSDAARVFEPIPDKL 102
            ++ CT+  +L++I   +++ S  CD +   +KL++ +     + L  A  VF  IP   
Sbjct: 78  FIDQCTNTMQLKQIHAHMLRTSRFCDPYT-ASKLLTAYAISSCSCLIYAKNVFNQIPQPN 136

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA---PVVYNYTYLLKVCGDVGEIRRGKE 159
              ++T+++GYA  +S D   SFLI +         P  + + +L K    +  +  G  
Sbjct: 137 LYCWNTLIRGYA--SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSV 194

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +HG +I    S DLF +  ++N Y   G  + A+++F  MP +D+VSWN ++  FA  G 
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            + AL L   M  +  + + IT+VS+L A A    L  G+ +  Y    GF   + ++ A
Sbjct: 255 PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVS-------------------------------W 308
           ++DMY KCG +  A+ +F+ M  +++VS                               W
Sbjct: 315 MLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAW 374

Query: 309 NSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           N++I+AY + G P  A+ +F +M L +  +P  VT++ AL A A LG ++ G ++H  + 
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +  +  +  +  SL+ MY+KC  +++A ++F  ++ K +  W+AMI   A  G+   AL+
Sbjct: 435 KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALD 494

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F  M    IKP++ T  +++ A             HA                      
Sbjct: 495 LFSSMLEAYIKPNAVTFTNILCACN-----------HA---------------------- 521

Query: 488 KCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
             G V     LF+ M   +     +  +  ++D +G  GL + A     KM   P  P  
Sbjct: 522 --GLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKM---PIPPTA 576

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV---DLLGRAG 592
             +   + ACS  G VE     + +L +   +EP   ++GA V   ++  +AG
Sbjct: 577 AVWGALLGACSRHGNVELAELAYQNLLE---LEPC--NHGAFVLLSNIYAKAG 624



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 132/290 (45%), Gaps = 12/290 (4%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYT 142
           K  +  +A  +F+ +P K  A ++ ++  Y +      A+S    M+   D  P      
Sbjct: 352 KLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLI 411

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
             L     +G I  G  IH  +  +  +L+    T +++MYAKCG + +A ++F  +  +
Sbjct: 412 CALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK 471

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D+  W+ ++   A  G  + ALDL + M E   + + +T  +IL A  + G +  G+ + 
Sbjct: 472 DVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLF 531

Query: 263 GYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGG 319
              M   +  +  +     +VD++ + G +E A    + M        W +++ A    G
Sbjct: 532 E-QMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590

Query: 320 NPEEAMRIFQKMLDQGVEPTN---VTIMEALHACADLGDLERGIFVHKLL 366
           N E A   +Q +L+  +EP N     ++  ++A A  GD E+   + KL+
Sbjct: 591 NVELAELAYQNLLE--LEPCNHGAFVLLSNIYAKA--GDWEKVSNLRKLM 636


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/690 (35%), Positives = 386/690 (55%), Gaps = 9/690 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQ--TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           S++E + +  L++KS   D+ L         ++ K +    A  VF+ +P +    +  M
Sbjct: 133 SIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVM 192

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G  +     D   F   M    + P  + Y+ +++ C  +  +  GK +H Q+++ GF
Sbjct: 193 IVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGF 252

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +F  T ++NMYAK G IE++Y +F+ M E + VSWN +++G   NG    A DL  R
Sbjct: 253 ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVR 312

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M       +  T+VS+  AV  +  + +GK V   A   G +  V V TAL+DMY+KCG 
Sbjct: 313 MKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGS 372

Query: 290 VETARLVFDG--MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           +  AR VFD   +       WN+MI+ Y + G  +EA+ ++ +M   G+     T     
Sbjct: 373 LHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVF 432

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTD---VSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
           +A A    L+ G  VH ++  LK G D   VS+ N++   YSKC  ++    +F +++ +
Sbjct: 433 NAIAASKSLQFGRVVHGMV--LKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEER 490

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +VSW  ++  Y+Q+    EAL  FC MR +   P+ FT  SV+ + A L  + Y + +H
Sbjct: 491 DIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVH 550

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L+ ++  +    + +ALIDMYAKCG++  A  +FD ++   + +W  +I GY  HGL +
Sbjct: 551 GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVE 610

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A++LF +M     K N +T LC + ACSH G+VEEG+ YF  ++  YG+ P M+HY  +
Sbjct: 611 DALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACI 670

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           +DLLGR GRL++A +FI+KMP+EP   V+  +LG C++H NVELGE AA ++  + P+  
Sbjct: 671 IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYS 730

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +VLL+N Y     ++    +R +M+ +G++K PG S + +K  VH FYSG  +HPQ K
Sbjct: 731 ATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKK 790

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSIHDVED 734
            IY  LE L ++IKA GYVPD   + +  D
Sbjct: 791 EIYVKLEELREKIKAMGYVPDLRYVLNNAD 820



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 247/519 (47%), Gaps = 8/519 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPE 201
           +L+ C + G IR  K +HG ++ + F   DL  +     ++Y+KC +   A  +FD MP+
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           R++ SW  ++ G  ++G           M   G   D     +I+ +   + SL +GK V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   +  GF + + VST+L++MYAK G +E +  VF+ M   N VSWN+MI+     G  
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            EA  +F +M +    P   T++    A   L D+  G  V     +L +  +V +  +L
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 382 ISMYSKCKKVDRAADIFSK--LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           I MYSKC  +  A  +F    +       WNAMI GY+Q+G   EAL  + +M    I  
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 423

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF-VMTALIDMYAKCGAVGTARAL 498
           D +T  SV  A+A    +++ + +H +V++   +  V  V  A+ D Y+KCG +   R +
Sbjct: 424 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 483

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M ER + +W  ++  Y    LG+ A+  F  M E    PN  TF   + +C+    +
Sbjct: 484 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 543

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E G      L K  G++       A++D+  + G + EA     K+   P I  + A++ 
Sbjct: 544 EYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIIS 601

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
               H  VE   +   R+ EL   +     LL  ++A +
Sbjct: 602 GYAQHGLVEDALQLFRRM-ELSGIKANAVTLLCVLFACS 639



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFD--SIVNVSTALVDMYAKCGRVETARLVFDG 299
           ++ +L   A  GS+R  KAVHG  +++ F+   ++ +      +Y+KC     A  VFD 
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  RNV SW  MI    E G   +  + F +ML+ G+ P        + +C  L  LE G
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH  +      T + ++ SL++MY+K   ++ +  +F+ +     VSWNAMI G   N
Sbjct: 241 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   EA + F +M++    P+ +T+VSV  A+ +L  +   K +         E NV V 
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 360

Query: 480 TALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           TALIDMY+KCG++  AR++FD   +N    T WN MI GY   G  + A+EL+ +M +  
Sbjct: 361 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 420

Query: 538 TKPNDITFLCAISACSHSGLVEEG 561
              +  T+    +A + S  ++ G
Sbjct: 421 ITSDLYTYCSVFNAIAASKSLQFG 444


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/661 (38%), Positives = 381/661 (57%), Gaps = 6/661 (0%)

Query: 157 GKEIHGQLIVNGFS-LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           G+ IH  +I    + L  F    +VNMY+K   +  A  +      R +V+W ++++G  
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            N     AL   T M  +  + +  T   +  A A V     GK +HG A++ G    V 
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V  +  DMY K G    A  +FD M  RN+ +WN+ I+  V+     +A+  F++ L   
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            EP ++T    L+AC D+  L  G  +H  + +     DVS+ N LI  Y KC  +  A 
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAE 264

Query: 396 DIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
            +F+++   K +VSW +M+    QN     A   F + R K ++P  F + SV+ A AEL
Sbjct: 265 MVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAEL 323

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +   + +HAL +++C E N+FV +AL+DMY KCG++  A  +F  + ER++ TWN MI
Sbjct: 324 GGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383

Query: 515 DGYGTHGLGKAAVELFNKMLEGP--TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
            GY   G    A+ LF +M  G    +P+ +T +  +S CS  G VE GI  F S++ +Y
Sbjct: 384 GGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNY 443

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           GIEP  +H+  +VDLLGR+G ++ A++FIQ M I+P I+V+GA+LGAC++H   ELG+ A
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIA 503

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +LFELD  + G HV+L+N+ A+A  W++   VR  M+  G++K  G S + +KN +H 
Sbjct: 504 AEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHV 563

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIA 751
           F +  + H ++  I   L  L   +K AGYVPDTN S+ D+ED  + + +  HSEK+A+A
Sbjct: 564 FQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALA 623

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           FGL+    G  I I KNLR+CGDCH+A K+IS + GREIIVRD HRFH FK+G CSC DY
Sbjct: 624 FGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDY 683

Query: 812 W 812
           W
Sbjct: 684 W 684



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 229/468 (48%), Gaps = 17/468 (3%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
                LV+++ K + L+ A  V      +    + +++ G         A+     MR D
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD 102

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +V P  + +  + K    V     GK+IHG  +  G   D+F      +MY K G   +A
Sbjct: 103 NVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE----EGRRGDFITIVSILPA 248
             MFD MP+R+L +WN  ++   Q+     +LD +    E     G     IT  + L A
Sbjct: 163 CNMFDEMPQRNLATWNAYISNAVQD---RRSLDAIVAFKEFLCVHGEPNS-ITFCAFLNA 218

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVS 307
             ++  L +G+ +H + +R G+   V+V+  L+D Y KCG + +A +VF+ + +R NVVS
Sbjct: 219 CVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVS 278

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           W SM+AA V+    E A  +F +   + VEPT+  I   L ACA+LG LE G  VH L  
Sbjct: 279 WCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAV 337

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +  +  ++ + ++L+ MY KC  ++ A  +FS+L  + LV+WNAMI GYA  G ++ AL 
Sbjct: 338 KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALR 397

Query: 428 YFCKMR--SKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALID 484
            F +M   S  I+P   T++S++   + +  + R  +   ++ +    E        ++D
Sbjct: 398 LFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVD 457

Query: 485 MYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           +  + G V  A     +M  +  ++ W  ++     HG   LGK A E
Sbjct: 458 LLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAE 505



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 188/371 (50%), Gaps = 8/371 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I  L +K G+            ++CK     DA  +F+ +P +  A ++  +    + 
Sbjct: 128 KQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQD 187

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
               DA+            P    +   L  C D+  +  G+++H  ++  G+  D+   
Sbjct: 188 RRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVA 247

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
            G+++ Y KCG I  A  +F+R+  R ++VSW +++A   QN   E A  +  +  +E  
Sbjct: 248 NGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVE 307

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             DF+ I S+L A A +G L +G++VH  A++A  +  + V +ALVDMY KCG +E A  
Sbjct: 308 PTDFM-ISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQ 366

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADL 353
           VF  +  RN+V+WN+MI  Y   G+ + A+R+F++M     G+ P+ VT++  L  C+ +
Sbjct: 367 VFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRV 426

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGKTLVS-WN 410
           G +ERGI + + + +L  G +    +   ++ +  +   VDRA +    +  +  +S W 
Sbjct: 427 GAVERGIQIFESM-RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWG 485

Query: 411 AMILGYAQNGR 421
           A++     +G+
Sbjct: 486 ALLGACRMHGK 496



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 20/375 (5%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            L  C  +  L   R++   I++ G  +       L+  + K   +  A  VF  I ++ 
Sbjct: 215 FLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRK 274

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           + + + +ML    +    + A    ++ R  +V P  +  + +L  C ++G +  G+ +H
Sbjct: 275 NVVSWCSMLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVH 333

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              +      ++F  + +V+MY KCG IE A ++F  +PER+LV+WN ++ G+A  G  +
Sbjct: 334 ALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDID 393

Query: 222 LALDLVTRMH--EEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVST 278
           +AL L   M     G R  ++T++SIL   + VG++  G +      +  G +       
Sbjct: 394 MALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFA 453

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD-QGV 336
            +VD+  + G V+ A      M  +  +S W +++ A    G  E      +K+ +   V
Sbjct: 454 CVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHV 513

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV-----SMTNSLISMYSKCKKV 391
           +  N  ++  + A A  G  E    V K +  + +  +V     ++ N +    +K    
Sbjct: 514 DSGNHVVLSNMLASA--GRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSH 571

Query: 392 DRAADI---FSKLQG 403
           DR ++I     KL+G
Sbjct: 572 DRNSEIQAMLGKLRG 586


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/700 (36%), Positives = 397/700 (56%), Gaps = 41/700 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM--YAKCGQIEEAYKMFDRMPE 201
           LL+ C  + EI    +IH Q I  G S +   +T V+      + G +  A K+FD +P+
Sbjct: 41  LLETCNTMYEI---NQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQ 97

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
             +  WNT++ G+++   +E  + L   M     + D  T   +L       +L+ GK +
Sbjct: 98  PSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVL 157

Query: 262 HGYAMRAGF-DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
             +A+  GF DS + V    + +++ CG V  AR +FD      VV+WN +++ Y     
Sbjct: 158 LNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKR 217

Query: 321 PEEAMRIFQKMLD--QGVEPTNVTIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSM 377
            EE+ R+F +M    + V P +VT++  L AC+ L DL  G  ++ K + +  +  ++ +
Sbjct: 218 YEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLIL 277

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTL------------------------------- 406
            N+LI M++ C ++D A  +F +++ + +                               
Sbjct: 278 ENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDY 337

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSW AMI GY +  R  E L  F  M+  N+KPD FTMVS++ A A L  +   +W    
Sbjct: 338 VSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTY 397

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           + ++  + + F+  ALIDMY KCG V  A+ +F+ M ++   TW  MI G   +G G+ A
Sbjct: 398 IDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEA 457

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           + +F+ MLE    P++IT++  + AC+H GLV +G H+F+++   +GI+P + HYG MVD
Sbjct: 458 LTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVD 517

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           LLGRAG L EA + I  MP++P   V+G++LGAC++HKNV+L E AAN + EL+P+ G  
Sbjct: 518 LLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAV 577

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +VLL NIYAA   W  L  VR +M ++G++K PGCSL+E+   V+ F +G   HPQSK I
Sbjct: 578 YVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEI 637

Query: 707 YTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           Y  LE +  ++  AGY PDT+ +  DV +  +E  L  HSEKLAIA+ L++S  G TI I
Sbjct: 638 YAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRI 697

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
            KNLR+C DCH+    +S V  RE+IVRD  RFH F++G+
Sbjct: 698 VKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 257/550 (46%), Gaps = 82/550 (14%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD---AARVFEPIPDKL 102
           LLE C ++ E+ +I    IK+GL   HLF TK++ +FC      D   A +VF+ IP   
Sbjct: 41  LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVI-IFCCTKESGDVYYARKVFDEIPQPS 99

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             +++TM+KGY++    +  VS    M   ++ P  + + +LLK       ++ GK +  
Sbjct: 100 VFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLN 159

Query: 163 QLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +++GF   +LF   G +++++ CG +  A K+FD     ++V+WN +++G+ +    E
Sbjct: 160 HAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYE 219

Query: 222 LALDLVTRMHE--EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSIVNVST 278
            +  L   M +  E    + +T+V +L A + +  L  GK ++   ++ G  +  + +  
Sbjct: 220 ESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILEN 279

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNS---------------------------- 310
           AL+DM+A CG ++ AR VFD MK+R+V+SW S                            
Sbjct: 280 ALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVS 339

Query: 311 ---MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
              MI  Y+     +E + +F+ M    V+P   T++  L ACA LG LE G +    +D
Sbjct: 340 WTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYID 399

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           + K+  D  + N+LI MY KC  V++A  IF+++Q K   +W AMI+G A NG   EAL 
Sbjct: 400 KNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALT 459

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F  M   ++ PD  T + V+ A   +                                 
Sbjct: 460 MFSYMLEASVTPDEITYIGVMCACTHV--------------------------------- 486

Query: 488 KCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
             G V   +  F  M  +H     +T +  M+D  G  G  K A+E+   M   P KPN 
Sbjct: 487 --GLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNM---PVKPNS 541

Query: 543 ITFLCAISAC 552
           I +   + AC
Sbjct: 542 IVWGSLLGAC 551



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 152/335 (45%), Gaps = 10/335 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +V+ F     +  A + F+ +P++    +  M+ GY +     + ++    M+  +V 
Sbjct: 310 TSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVK 369

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  +G +  G+     +  N    D F    +++MY KCG +E+A K+
Sbjct: 370 PDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKI 429

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ M ++D  +W  ++ G A NG  E AL + + M E     D IT + ++ A  +VG +
Sbjct: 430 FNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLV 489

Query: 256 RIGKAVHG-YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
             GK      A++ G    +     +VD+  + G ++ A  V   M  + N + W S++ 
Sbjct: 490 AKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLG 549

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDLE--RGIFVHKLLD 367
           A     N + A     ++L+  +EP N    V +     AC    +L   R + + + + 
Sbjct: 550 ACRVHKNVQLAEMAANEILE--LEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIK 607

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++   + + M   +    +  K   ++ +I++KL+
Sbjct: 608 KIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLE 642


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/649 (37%), Positives = 385/649 (59%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+     + DA RVF+ +P +   L++ ML+GY K    D+A+     MR     
Sbjct: 151 SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSM 210

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                YT +L +C   G    G ++HG +I +GF  D      +V MY+KCG +  A K+
Sbjct: 211 VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKL 270

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ MP+ D V+WN ++AG+ QNGF + A  L   M   G + D +T  S LP++   GSL
Sbjct: 271 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 330

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R  K VH Y +R      V + +AL+D+Y K G VE AR +F      +V    +MI+ Y
Sbjct: 331 RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGY 390

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V  G   +A+  F+ ++ +G+   ++T+   L ACA +  L+ G  +H  + + +L   V
Sbjct: 391 VLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIV 450

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           ++ +++  MY+KC ++D A + F ++  +  V WN+MI  ++QNG+   A++ F +M   
Sbjct: 451 NVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMS 510

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             K DS ++ S + A A L  + Y K +H  VIR+ F  + FV + LIDMY+KCG +  A
Sbjct: 511 GAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALA 570

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F++M+ ++  +WN +I  YG HG  +  ++L+++ML     P+ +TFL  ISAC H+
Sbjct: 571 WCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHA 630

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GLV+EGIHYF  + ++YGI   M+HY  MVDL GRAGR++EA+D I+ MP  P   V+G 
Sbjct: 631 GLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGT 690

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC++H NVEL + A+  L ELDP   GY+VLL+N++A A  W  + KVR++M++KG+
Sbjct: 691 LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGV 750

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           QK PG S +++    H F +    HP+S  IY  L++L+ E++  GYVP
Sbjct: 751 QKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVP 799



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 251/491 (51%), Gaps = 3/491 (0%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L   C+    +++ R++   +I  G+ D     ++++ L+       DA  +F  +  + 
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ M++G       D A+ F  +M   +V+P  Y + Y++K CG +  +     +H 
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                GF +DLFA + ++ +YA  G I +A ++FD +P RD + WN ++ G+ ++G  + 
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+     M       + +T   IL   A  G+   G  +HG  + +GF+    V+  LV 
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY+KCG +  AR +F+ M   + V+WN +IA YV+ G  +EA  +F  M+  GV+P +VT
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L +  + G L     VH  + + ++  DV + ++LI +Y K   V+ A  IF +  
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNI 376

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
              +    AMI GY  +G   +A+N F  +  + +  +S TM SV+PA A ++ ++  K 
Sbjct: 377 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE 436

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  +++   E  V V +A+ DMYAKCG +  A   F  M++R    WN MI  +  +G 
Sbjct: 437 LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGK 496

Query: 523 GKAAVELFNKM 533
            + A++LF +M
Sbjct: 497 PEIAIDLFRQM 507



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 226/461 (49%), Gaps = 1/461 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           L + C D   +++ +++H Q+IV G        + V+ +Y  CG+  +A  +F  +  R 
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
            + WN ++ G    G+ + AL    +M       D  T   ++ A   + ++ +   VH 
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
            A   GF   +   +AL+ +YA  G +  AR VFD +  R+ + WN M+  YV+ G+ + 
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+  F +M        +VT    L  CA  G+   G  +H L+       D  + N+L++
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MYSKC  +  A  +F+ +     V+WN +I GY QNG  +EA   F  M S  +KPDS T
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             S +P++ E   +R+ K +H+ ++R     +V++ +ALID+Y K G V  AR +F    
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNI 376

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
              V     MI GY  HGL   A+  F  +++     N +T    + AC+    ++ G  
Sbjct: 377 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE 436

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
               + K   +E +++   A+ D+  + GRL+ A++F ++M
Sbjct: 437 LHCHILKKR-LENIVNVGSAITDMYAKCGRLDLAYEFFRRM 476



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 230/465 (49%), Gaps = 8/465 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L+I SG          LV+++ K  +L  A ++F  +P      ++ ++ GY +    D+
Sbjct: 238 LVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE 297

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A      M    V P    +   L    + G +R  KE+H  ++ +    D++  + +++
Sbjct: 298 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 357

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           +Y K G +E A K+F +    D+     +++G+  +G    A++    + +EG   + +T
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + S+LPA A V +L+ GK +H + ++   ++IVNV +A+ DMYAKCGR++ A   F  M 
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            R+ V WNSMI+++ + G PE A+ +F++M   G +  +V++  AL A A+L  L  G  
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKE 537

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H  + +    +D  + ++LI MYSKC  +  A  +F+ + GK  VSWN++I  Y  +G 
Sbjct: 538 MHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGC 597

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMT 480
             E L+ + +M    I PD  T + +I A     ++     + H +         +    
Sbjct: 598 PRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYA 657

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVT----TWNVMIDGYGTHG 521
            ++D+Y + G V  A   FD +     T     W  ++     HG
Sbjct: 658 CMVDLYGRAGRVHEA---FDTIKSMPFTPDAGVWGTLLGACRLHG 699



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 146/313 (46%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+  A ++   ++  + VH   +  G   +   S+ ++ +Y  CGR   A  +F  ++ R
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
             + WN MI      G  + A+  + KML   V P   T    + AC  L ++   + VH
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
                L    D+   ++LI +Y+    +  A  +F +L  +  + WN M+ GY ++G  +
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            A+  FC+MR+     +S T   ++   A          +H LVI S FE +  V   L+
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLV 255

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            MY+KCG +  AR LF+ M +    TWN +I GY  +G    A  LFN M+    KP+ +
Sbjct: 256 AMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 315

Query: 544 TFLCAISACSHSG 556
           TF   + +   SG
Sbjct: 316 TFASFLPSILESG 328


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/635 (39%), Positives = 374/635 (58%), Gaps = 5/635 (0%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY+K    E A  +    P R++VSW ++++G AQNG    AL     M  EG   +  T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
                 AVA++     GK +H  A++ G    V V  +  DMY K    + AR +FD + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            RN+ +WN+ I+  V  G P EA+  F +       P ++T    L+AC+D   L  G+ 
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H L+ +    TDVS+ N LI  Y KCK++  +  IF+++  K  VSW +++  Y QN  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             +A   + + R   ++   F + SV+ A A ++ +   + IHA  +++C E+ +FV +A
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE---GPT 538
           L+DMY KCG +  +   FD M E+++ T N +I GY   G    A+ LF +M     GPT
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            PN +TF+  +SACS +G VE G+  F S++  YGIEP  +HY  +VD+LGRAG +  A+
Sbjct: 361 -PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           +FI+KMPI+P I+V+GA+  AC++H   +LG  AA  LF+LDP + G HVLL+N +AAA 
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W +   VR  ++  G++K  G S + +KN+VH+F +    H  +K I T L  L +E++
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 539

Query: 719 AAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
           AAGY PD   S++D+E+  +   +S HSEKLA+AFGLL+      I I KNLR+CGDCH+
Sbjct: 540 AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHS 599

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K++S    REIIVRD +RFH FK+G+CSC DYW
Sbjct: 600 FFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 13/298 (4%)

Query: 37  RIYRHPSAL----LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           RI  HP+++     L  C+    L    ++  L+++SG          L+  + K   + 
Sbjct: 152 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 211

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
            +  +F  +  K    + +++  Y +    + A    +R R D V    +  + +L  C 
Sbjct: 212 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 271

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            +  +  G+ IH   +       +F  + +V+MY KCG IE++ + FD MPE++LV+ N+
Sbjct: 272 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 331

Query: 210 IVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           ++ G+A  G  ++AL L   M     G   +++T VS+L A +  G++  G  +   +MR
Sbjct: 332 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMR 390

Query: 268 A--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
           +  G +      + +VDM  + G VE A      M  +  +S W ++  A    G P+
Sbjct: 391 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 448


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/664 (38%), Positives = 382/664 (57%), Gaps = 6/664 (0%)

Query: 155 RRGKEIHGQ-LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           R G+  H + L +    L  F    +VN+Y+K      A       P   +VS+   ++G
Sbjct: 26  RLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISG 85

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL--RIGKAVHGYAMRAGF- 270
            AQ+     AL     M   G R +  T  S   A A        +G  +H  A+R G+ 
Sbjct: 86  AAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYL 145

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
                VS A +DMY K G +  AR +F+ M +RNV++WN+++   V  G P E  + +  
Sbjct: 146 PGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFG 205

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           + + G  P  V++    +ACA    L  G   H  +       DVS++N+++  Y KC+ 
Sbjct: 206 LREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRC 265

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
             +A  +F  ++ +  VSW +MI+ YAQ+G   +AL  +   R+   +P  F + SV+  
Sbjct: 266 AGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTT 325

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A L  + + + +HA+ +RSC + N+FV +AL+DMY KCG V  A  +F  M ER++ TW
Sbjct: 326 CAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTW 385

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           N MI GY   G  + A+ +F+ M+  G T PN IT +  I+ACS  GL ++G   F +++
Sbjct: 386 NAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMR 445

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           + +G+EP  +HY  +VDLLGRAG    A++ IQ+MP+ P I+V+GA+LGACK+H   ELG
Sbjct: 446 ERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELG 505

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
             A+ +LFELDP + G HVLL+N+ A+A  W +   VR  M+  G++K PGCS +  KN 
Sbjct: 506 RIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNV 565

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKL 748
           VH FY+  TKH ++  I   L  L  +++A+GY+PDT  S++DVE+  +E  +  HSEKL
Sbjct: 566 VHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKL 625

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           A+AFGL++  P   I I KNLR+C DCH A K++S + GREIIVRD +RFH FK   CSC
Sbjct: 626 ALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSC 685

Query: 809 GDYW 812
            DYW
Sbjct: 686 KDYW 689



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 9/349 (2%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           + ++ K   L  A R+FE +P++    ++ ++          +       +R     P V
Sbjct: 156 MDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNV 215

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
            +       C     +  G++ HG ++  GF +D+     +V+ Y KC    +A  +FD 
Sbjct: 216 VSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDG 275

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M  R+ VSW +++  +AQ+G  E AL +       G       + S+L   A +  L  G
Sbjct: 276 MRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFG 335

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           +A+H  A+R+  D+ + V++ALVDMY KCG VE A  VF  M  RN+V+WN+MI  Y   
Sbjct: 336 RALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHI 395

Query: 319 GNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL--KLGTDV 375
           G+ + A+ +F  M+   G  P ++T++  + AC+  G  + G   ++L D +  + G + 
Sbjct: 396 GDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDG---YELFDTMRERFGVEP 452

Query: 376 SMTN--SLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGR 421
              +   ++ +  +    +RA +I  ++  +  +S W A++     +G+
Sbjct: 453 RTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGK 501



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 19/333 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +V  + K      A  VF+ +  +    + +M+  YA+  + +DA++  +  R     P 
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  C  +  +  G+ +H   + +    ++F  + +V+MY KCG +E+A ++F 
Sbjct: 316 DFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFL 375

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLR 256
            MPER+LV+WN ++ G+A  G A+ AL +   M    G   + IT+V+++ A +     R
Sbjct: 376 DMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACS-----R 430

Query: 257 IGKAVHGYAM------RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WN 309
            G    GY +      R G +        +VD+  + G  E A  +   M  R  +S W 
Sbjct: 431 GGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWG 490

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +++ A    G  E      +K+ +   + +   ++ + +  A  G       V K +  +
Sbjct: 491 ALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLS-NMLASAGRWAEATDVRKEMKNV 549

Query: 370 KLGTD-----VSMTNSLISMYSKCKKVDRAADI 397
            +  +     ++  N +   Y+K  K DR ++I
Sbjct: 550 GIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEI 582


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/514 (45%), Positives = 330/514 (64%), Gaps = 32/514 (6%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+ +GV+P   T+   + ACA +  LE+G   H  + ++   +DV +  +L+ MY++C  
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILG-------------------------------YAQN 419
           ++ A  +F K+  ++  +WNAMI G                               YAQN
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G  +E+LN F +MR   +K D F M SV+ A A+L+ +   +  HA V++S F  ++ V 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +AL+DMYAK G++  A  +FD M +R+  +WN +I G   HG G  AV LF +ML+   K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN+I+F+  +SACSH+GLV EG  YF  + ++YGI P + HY  M+DLLGRAG L+EA +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI  MP+EP ++V+GA+LGAC+IH N EL ++ A  L  ++    G +VLL+NIYAAA  
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD  AKVR +M+ +G+ K PG S +E+K  +H+F +G T HPQ K I+ FLE+L  ++KA
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AGYVP+ N +  DVED  +E  LS HSEKLAIAFG++N++PG+TI + KNLRVCGDCH  
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K+ISL   R+I+VRD +RFH FK+G CSCGDYW
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 165/313 (52%), Gaps = 33/313 (10%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V P  +  + ++K C  +  + +GK+ H  +I  GF  D+   T +V+MYA+CG +E+A 
Sbjct: 6   VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65

Query: 194 KMFDRMPER-------------------------------DLVSWNTIVAGFAQNGFAEL 222
            +FD+M ER                               D+VSW  ++AG+AQNG+ + 
Sbjct: 66  HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +L++  +M + G + D   + S+L A A++ +L +G+  H Y +++GF   + V +ALVD
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAK G +E A  VFD M  RN VSWNS+I    + G   +A+ +F++ML  G++P  ++
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245

Query: 343 IMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +  L AC+  G +  G     L+ Q   +  DVS    +I +  +   +D A +  + +
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGM 305

Query: 402 QGKTLVS-WNAMI 413
             +  VS W A++
Sbjct: 306 PVEPDVSVWGALL 318



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 158/322 (49%), Gaps = 33/322 (10%)

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           +G + +  T+ +++ A A++ SL  GK  H Y ++ GF+S V V TALV MYA+CG +E 
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 293 ARLVFDGMKSR-------------------------------NVVSWNSMIAAYVEGGNP 321
           A  VFD M  R                               +VVSW ++IA Y + G  
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           +E++ +F +M   G++     +   L ACADL  LE G   H  + Q     D+ + ++L
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + MY+K   ++ A  +F K+  +  VSWN++I G AQ+GR N+A+  F +M    IKP+ 
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            + V V+ A +   ++   +    L+ ++     +V   T +ID+  + G +  A    +
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303

Query: 501 MMN-ERHVTTWNVMIDGYGTHG 521
            M  E  V+ W  ++     HG
Sbjct: 304 GMPVEPDVSVWGALLGACRIHG 325



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 162/330 (49%), Gaps = 39/330 (11%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            SL++ ++    IIK G     + QT LV ++ +  SL DA  VF+ + ++    ++ M+
Sbjct: 24  ASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMI 83

Query: 111 KGYAKFASLDDAVSFLIRMRYDDV---APVVYNYTY------------------------ 143
            G+A+   +  A+     M   DV     V+  Y                          
Sbjct: 84  TGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRF 143

Query: 144 ----LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
               +L  C D+  +  G++ H  ++ +GF+LD+   + +V+MYAK G +E+A ++FD+M
Sbjct: 144 IMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKM 203

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P+R+ VSWN+I+ G AQ+G    A+ L  +M + G + + I+ V +L A ++ G +  G+
Sbjct: 204 PQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGR 263

Query: 260 AVHGY--AMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
              GY   M   +  + +VS  T ++D+  + G ++ A    +GM     VS W +++ A
Sbjct: 264 ---GYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGA 320

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
               GN E A RI + +L   V+   + ++
Sbjct: 321 CRIHGNTELAKRIAEHLLGMEVQIAGIYVL 350



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 5/183 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  L  L   R+    +++SG     +  + LV ++ K  S+ DA +VF+ +P + 
Sbjct: 148 VLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRN 207

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           +  +++++ G A+    +DAV    +M    + P   ++  +L  C   G +  G+    
Sbjct: 208 EVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFN 267

Query: 163 QLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFA 220
            +  N G   D+   T ++++  + G ++EA    + MP E D+  W  ++     +G  
Sbjct: 268 LMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNT 327

Query: 221 ELA 223
           ELA
Sbjct: 328 ELA 330


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/673 (36%), Positives = 373/673 (55%), Gaps = 32/673 (4%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV-TRM 230
           +LF+   ++  Y+K G I E    F+++P+RD V+WN ++ G++ +G    A+    T M
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            +       +T++++L   ++ G + +GK +HG  ++ GF+S + V + L+ MYA  G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190

Query: 291 ETARLVFDGMKSRNVV------------------------------SWNSMIAAYVEGGN 320
             A+ VF G+  RN V                              SW +MI    + G 
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +EA+  F++M  QG++         L AC  LG +  G  +H  + +      + + ++
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI MY KCK +  A  +F +++ K +VSW AM++GY Q GR  EA+  F  M+   I PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            +T+   I A A +S +      H   I S     V V  +L+ +Y KCG +  +  LF+
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            MN R   +W  M+  Y   G     ++LF+KM++   KP+ +T    ISACS +GLVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF  +  +YGI P + HY  M+DL  R+GRL EA  FI  MP  P    +  +L AC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           +   N+E+G+ AA  L ELDP     + LL++IYA+   WD +A++R  M +K ++K PG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S ++ K ++HSF +     P   +IY  LE L ++I   GY PDT+ + HDVE+ V+  
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
           +L+ HSE+LAIAFGL+    G  I + KNLRVC DCHNATK+IS VTGREI+VRD  RFH
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFH 730

Query: 800 CFKNGVCSCGDYW 812
            FK+G CSCGD+W
Sbjct: 731 RFKDGTCSCGDFW 743



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 259/559 (46%), Gaps = 72/559 (12%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+  + K   +S+    FE +PD+    ++ +++GY+    +  AV     M  D  A +
Sbjct: 78  LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137

Query: 138 V-YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK----------- 185
                  +LK+    G +  GK+IHGQ+I  GF   L   + ++ MYA            
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197

Query: 186 --------------------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
                               CG IE+A ++F  M E+D VSW  ++ G AQNG A+ A++
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIE 256

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
               M  +G + D     S+LPA   +G++  GK +H   +R  F   + V +AL+DMY 
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KC  +  A+ VFD MK +NVVSW +M+  Y + G  EEA++IF  M   G++P + T+ +
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           A+ ACA++  LE G   H       L   V+++NSL+++Y KC  +D +  +F+++  + 
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            VSW AM+  YAQ GR  E +  F KM    +KPD  T+  VI A +   ++        
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV-------- 488

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
                  EK       +   Y    ++G                ++ MID +   G  + 
Sbjct: 489 -------EKGQRYFKLMTSEYGIVPSIG---------------HYSCMIDLFSRSGRLEE 526

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+   N M   P  P+ I +   +SAC + G +E G     SL +   ++P   H+ A  
Sbjct: 527 AMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE---LDP---HHPAGY 577

Query: 586 DLLGRAGRLNEAWDFIQKM 604
            LL         WD + ++
Sbjct: 578 TLLSSIYASKGKWDSVAQL 596



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 31/369 (8%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I   +IK G     L  + L+ ++     +SDA +VF  + D+   +Y++++ G    
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218

Query: 117 ASLDDAVSFLIRMRYDDVAPVV------------------------------YNYTYLLK 146
             ++DA+     M  D V+                                 Y +  +L 
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            CG +G I  GK+IH  +I   F   ++  + +++MY KC  +  A  +FDRM ++++VS
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           W  +V G+ Q G AE A+ +   M   G   D  T+   + A ANV SL  G   HG A+
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
            +G    V VS +LV +Y KCG ++ +  +F+ M  R+ VSW +M++AY + G   E ++
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMY 385
           +F KM+  G++P  VT+   + AC+  G +E+G    KL+  +  +   +   + +I ++
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518

Query: 386 SKCKKVDRA 394
           S+  +++ A
Sbjct: 519 SRSGRLEEA 527



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)

Query: 40  RHPSALLLEVCTSL---KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           ++P   +L  C  L    E ++I   II++   D     + L+ ++CK   L  A  VF+
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD 329

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
            +  K    +  M+ GY +    ++AV   + M+   + P  Y     +  C +V  +  
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G + HG+ I +G    +     +V +Y KCG I+++ ++F+ M  RD VSW  +V+ +AQ
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G A   + L  +M + G + D +T+  ++ A +  G +  G+  +   M + +  + ++
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR-YFKLMTSEYGIVPSI 508

Query: 277 S--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
              + ++D++++ GR+E A    +GM    + + W ++++A    GN E      + +++
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568

Query: 334 -QGVEPTNVTIMEALHACA----DLGDLERGI 360
                P   T++ +++A       +  L RG+
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           RY K IH  +IR+      F+   ++  YA   +   AR +FD + + ++ +WN ++  Y
Sbjct: 23  RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
              GL       F K+   P + + +T+   I   S SGLV   +  + ++ +D+
Sbjct: 83  SKAGLISEMESTFEKL---PDR-DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/813 (32%), Positives = 425/813 (52%), Gaps = 80/813 (9%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            ++L++C +L EL     +   ++K G   D HL    L++L+ KY  +  A +VF+  P
Sbjct: 135 TVVLKICLALMELWLGMEVHACLVKRGFHVDVHL-SCALINLYEKYLGIDGANQVFDETP 193

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + D L++T++    +    +DA+    RM+             LL+ CG +  +  GK+
Sbjct: 194 LQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQ 253

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IHG +I  G   +      +V+MY++  ++E A   FD   + +  SWN+I++ +A N  
Sbjct: 254 IHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDC 313

Query: 220 AELALDLVTRMHEEGRRGDFIT-----------------------------------IVS 244
              A DL+  M   G + D IT                                   I S
Sbjct: 314 LNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITS 373

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            L AV  +G   +GK +HGY MR+  +  V V T+LVD Y K   ++ A +VF   K++N
Sbjct: 374 ALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKN 433

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           + +WNS+I+ Y   G  + A ++  +M ++G++P                          
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKP-------------------------- 467

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGYAQNG 420
                    D+   NSL+S YS   + + A  + ++++       +VSW AMI G  QN 
Sbjct: 468 ---------DLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNE 518

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +AL +F +M+ +N+KP+S T+ +++ A A  S+++  + IH   +R  F  ++++ T
Sbjct: 519 NYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIAT 578

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           ALIDMY K G +  A  +F  + E+ +  WN M+ GY  +G G+    LF++M +   +P
Sbjct: 579 ALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRP 638

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + ITF   +S C +SGLV +G  YF S+K DY I P ++HY  MVDLLG+AG L+EA DF
Sbjct: 639 DAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDF 698

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I  +P +   +++GA+L AC++HK++++ E AA  L  L+P     + L+ NIY+    W
Sbjct: 699 IHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRW 758

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             + +++  M   G++     S +++K  +H F +    HP+   IY  L  LI EIK  
Sbjct: 759 GDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKL 818

Query: 721 GYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GYV D N +H +++D  +E +L SH+EKLA+ +GL+ +  GS I + KN R+C DCH   
Sbjct: 819 GYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTA 878

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KYISL   REI +RD  RFH F NG CSC D W
Sbjct: 879 KYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 158/622 (25%), Positives = 277/622 (44%), Gaps = 66/622 (10%)

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           G++  +   +E+H Q+I      +L  M G ++  Y + G  E A K+F     R+ + W
Sbjct: 39  GEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLW 98

Query: 208 NTIVAGFAQ-NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           N+ +  FA   G +   L +   +H++G + D   +  +L     +  L +G  VH   +
Sbjct: 99  NSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLV 158

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           + GF   V++S AL+++Y K   ++ A  VFD    +    WN+++ A +     E+A+ 
Sbjct: 159 KRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALE 218

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F++M     + T+ TI++ L AC  L  L  G  +H  + +    ++ S+ NS++SMYS
Sbjct: 219 LFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYS 278

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA--------------------- 425
           +  +++ A   F   +     SWN++I  YA N  +N A                     
Sbjct: 279 RNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNS 338

Query: 426 --------------LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
                         L  F  ++S   KPDS ++ S + A+  L      K IH  ++RS 
Sbjct: 339 LLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSK 398

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            E +V+V T+L+D Y K   +  A  +F     +++  WN +I GY   GL   A +L N
Sbjct: 399 LEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLN 458

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M E   KP+ +T+   +S  S SG  EE +     + K  G+ P +  + AM+    + 
Sbjct: 459 QMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRI-KSLGLTPNVVSWTAMISGCCQN 517

Query: 592 GRLNEAWDFIQKMP---IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
               +A  F  +M    ++P  T    +L AC     +++GE+     F +       H 
Sbjct: 518 ENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEI--HCFSMR------HG 569

Query: 649 LLANIYAAAS---MWDKLAKVRTIME--KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            L +IY A +   M+ K  K++   E  +   +KT  C         +    G   +   
Sbjct: 570 FLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPC--------WNCMMMGYAIYGHG 621

Query: 704 KRIYTFLETLIDEIKAAGYVPD 725
           + ++    TL DE++  G  PD
Sbjct: 622 EEVF----TLFDEMRKTGVRPD 639


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/612 (39%), Positives = 379/612 (61%), Gaps = 11/612 (1%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++    + G  + AL L++      ++   + I+S     A   SL     VH   + 
Sbjct: 42  NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILS----AARRNSLSDALDVHQLLVD 97

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            GFD    ++T L++M+++   V+ AR VFD  + R +  WN++  A    G   + + +
Sbjct: 98  GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157

Query: 328 FQKMLDQGVEPTNVTIMEALHACAD----LGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           + +M   GV     T    L AC      +  L++G  +H  + +   G  V +  +L+ 
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDS 441
           MY++   V  A+ +F ++  K +VSW+AMI  YA+NG+  EAL  F +M   + +  P+S
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            TMVSV+ A A  + +   K IHA ++R   +  + V++ALI MYA+CG + + + +FD 
Sbjct: 278 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDR 337

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M+++ V  WN +I  YG HG G+ A+++F +M++    P+ I+F+  + ACSH+GLVEEG
Sbjct: 338 MHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEG 397

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
              F S+ K++GI+P ++HY  MVDLLGRA RL+EA   I+ + IEPG  V+G++LGAC+
Sbjct: 398 KKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACR 457

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH +VEL E+A+ RLF+L+P   G +VLLA+IYA A MWD++ +V+ +++ + LQK PG 
Sbjct: 458 IHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGR 517

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E++ +++SF S    +PQ ++++  L  L +E+K  GY P T  + +D++   +E +
Sbjct: 518 SWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERI 577

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           +  HSEKLA+AFGL+N+S G TI I KNLR+C DCH+ TK+IS    REI+VRD++RFH 
Sbjct: 578 VLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHH 637

Query: 801 FKNGVCSCGDYW 812
           FK+GVCSCGDYW
Sbjct: 638 FKDGVCSCGDYW 649



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 225/423 (53%), Gaps = 24/423 (5%)

Query: 4   HSQCQLSV----FTNSTPTQTLHEHK-HTLSQRAYIPSRIY--RHPSALLLEVC------ 50
           +S  +LSV    F  STP  + + H   +L ++  +   +Y   H S    + C      
Sbjct: 19  YSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILS 78

Query: 51  ----TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
                SL +   +  L++  G        TKL+++F + +++ +A +VF+    +   ++
Sbjct: 79  AARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVW 138

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD----VGEIRRGKEIHG 162
           + + +  A     +D +    RM    V+   + YTYLLK C      V  +++GKEIH 
Sbjct: 139 NALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHA 198

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ +G+   +  MT +++MYA+ G +  A  +FD MP +++VSW+ ++A +A+NG    
Sbjct: 199 HILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYE 258

Query: 223 ALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           AL+L   M  +      + +T+VS+L A A   +L  GK +H Y +R G DSI+ V +AL
Sbjct: 259 ALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISAL 318

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           + MYA+CG++E+ +L+FD M  ++VV WNS+I++Y   G   +A++IF++M+D G  P++
Sbjct: 319 ITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSH 378

Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           ++ +  L AC+  G +E G      ++ +  +   V     ++ +  +  ++D AA I  
Sbjct: 379 ISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIE 438

Query: 400 KLQ 402
            L+
Sbjct: 439 DLR 441



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 204/402 (50%), Gaps = 9/402 (2%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  L+  GF  D F  T ++NM+++   ++ A K+FD+  +R +  WN +    A  G
Sbjct: 90  DVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAG 149

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPA-VAN---VGSLRIGKAVHGYAMRAGFDSIV 274
                L+L  RM+  G   D  T   +L A VA+   V  L+ GK +H + +R G+ + V
Sbjct: 150 RGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHV 209

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-- 332
           +V T L+DMYA+ G V  A  VFD M  +NVVSW++MIA Y + G P EA+ +F++M+  
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
                P +VT++  L ACA    LE+G  +H  + +  L + + + ++LI+MY++C K++
Sbjct: 270 THDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLE 329

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
               IF ++  K +V WN++I  Y  +G   +A+  F +M      P   + +SV+ A +
Sbjct: 330 SGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389

Query: 453 ELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVG-TARALFDMMNERHVTTW 510
              ++   K +  ++V     + +V     ++D+  +   +   A+ + D+  E     W
Sbjct: 390 HTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVW 449

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
             ++     H   + A     ++ +  PT   +   L  I A
Sbjct: 450 GSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYA 491



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 18/340 (5%)

Query: 46  LLEVCTS-------LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           LL+ C +       L++ + I   I++ G        T L+ ++ ++  +S A+ VF+ +
Sbjct: 176 LLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRR 156
           P K    +  M+  YAK     +A+     M  +  D  P       +L+ C     + +
Sbjct: 236 PVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQ 295

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK IH  ++  G    L  ++ ++ MYA+CG++E    +FDRM ++D+V WN++++ +  
Sbjct: 296 GKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGL 355

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVN 275
           +G+   A+ +   M + G     I+ +S+L A ++ G +  GK +    ++  G    V 
Sbjct: 356 HGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVE 415

Query: 276 VSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
               +VD+  +  R+ E A+++ D         W S++ A     + E A R  +++   
Sbjct: 416 HYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFK- 474

Query: 335 GVEPTNV---TIMEALHACADLGDLERGIFVHKLLDQLKL 371
            +EPTN     ++  ++A A++ D  +   V KLLD  +L
Sbjct: 475 -LEPTNAGNYVLLADIYAEAEMWDEVKR--VKKLLDSREL 511


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/771 (34%), Positives = 415/771 (53%), Gaps = 18/771 (2%)

Query: 47  LEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C++L+E     R   L+ KSG     +  + L+  + K     +A RVFE + +   
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             +  M+  + +  S   A+    RM    VAP  + +  LL     +G +  GK +H  
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAH 241

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           L++    L+L   T +V+MY KC  IE+A K+     E D+  W  I++GF Q+     A
Sbjct: 242 LMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREA 301

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +     M   G   +  T   IL A +++ +L +GK +H   + AG ++ V+V  +LVDM
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 284 YAKCGR-VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           Y KC   +E A   F G+ S NV+SW S+IA + E G  EE++++F  M   GV P + T
Sbjct: 362 YMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFT 421

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   L AC  +  L +   +H  + +     DV + N+L+  Y+    VD A  + S ++
Sbjct: 422 LSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMK 481

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + ++++ ++     Q G    ALN    M   +++ D F++ S + A A + ++   K 
Sbjct: 482 HRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQ 541

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H   ++S     + V   L+D+Y KCG +  A   F  + E    +WN +I G  ++G 
Sbjct: 542 LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGH 601

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
             +A+  F  M     +P+ IT L  + ACSH GLV+ G+ YF S+++ +GI P +DHY 
Sbjct: 602 VSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYV 661

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            +VDLLGRAGRL EA + I+ MP +P   ++  +LGACK+H N+ LGE  A +  ELDP 
Sbjct: 662 CLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPS 721

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           +  ++VLLAN+Y  +   +   K R +M ++G++K PG S +E +N VH F +G T HPQ
Sbjct: 722 DPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQ 781

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQEN-LLSSHSEKLAIAFGLLNSSPGS 761
             +I+  +E+LI + +  G             + QEN  L+ HSEKLA+AFGL+++ P +
Sbjct: 782 IGKIHEKIESLIAQFRNQGI------------WYQENRALAHHSEKLAVAFGLISTPPKA 829

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KN+R+C DCH+    ++ +  REIIVRD +RFH FK G CSC  YW
Sbjct: 830 PIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 296/616 (48%), Gaps = 10/616 (1%)

Query: 34  IPSRIYRHPSALLLEVCTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           IPS+I       ++  C S  +++   I   IIK G  +       L+SL+ K   +++A
Sbjct: 10  IPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA 69

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
            ++F+ +P +  A +  ++  Y K  + ++A+     M      P  +  +  L+ C  +
Sbjct: 70  RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            E   G      +  +GF  +    + +++ Y+KCG  +EAY++F+ M   D+VSW  +V
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMV 189

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           + F + G    AL L  RM + G   +  T V +L A + +G L  GK VH + M    +
Sbjct: 190 SSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIE 248

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             + + TALVDMY KC  +E A  V       +V  W ++I+ + +     EA+  F +M
Sbjct: 249 LNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEM 308

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK- 390
              GV P N T    L+AC+ +  L+ G  +H  +    L  DVS+ NSL+ MY KC   
Sbjct: 309 ETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNM 368

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A   F  +    ++SW ++I G++++G   E++  F  M+   ++P+SFT+ +++ A
Sbjct: 369 IEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGA 428

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
              +  +   + +H  +I++  + +V V  AL+D YA  G V  A  +  MM  R V T+
Sbjct: 429 CGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITY 488

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSL 568
             +       G  + A+ +   M +   + +  +    +SA +   ++E G  +H + S+
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCY-SV 547

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG-ACKIHKNVE 627
           K   G+   +     +VDL G+ G +++A     ++     ++  G + G A   H +  
Sbjct: 548 KS--GLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSA 605

Query: 628 LGEKAANRLFELDPDE 643
           L      RL  ++PD+
Sbjct: 606 LSAFEDMRLAGVEPDQ 621



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 443 TMVSVIPALAELSV------------IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           T VS IP+  E S+            +R    IH+ +I+  F++++F+   L+ +Y KC 
Sbjct: 5   TTVSKIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCF 64

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            V  AR LFD M  R V +W +++  YG  G  + A+ELF+ ML     PN+ T   A+ 
Sbjct: 65  GVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALR 124

Query: 551 ACSHSGLVEEGIHYFTSLKKD-YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           +CS       G  +   + K  +   PV+    A++D   + G   EA+   + M
Sbjct: 125 SCSALREFNHGTRFQALVTKSGFDSNPVLG--SALIDFYSKCGCTQEAYRVFEYM 177


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/690 (35%), Positives = 404/690 (58%), Gaps = 8/690 (1%)

Query: 31  RAYIPSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNS 87
           + ++PS  Y  PS  LL+ C+ L      L L   I+ SGL       + L++ + K+  
Sbjct: 54  KTHVPSDAYTFPS--LLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGF 111

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
              A +VF+ +P++    + T++  Y++   + +A S    MR   + P   +   +L +
Sbjct: 112 ADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQP---SSVTVLSL 168

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
              V E+   + +HG  I+ GF  D+     ++N+Y KCG IE + K+FD M  RDLVSW
Sbjct: 169 LFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSW 228

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N++++ +AQ G     L L+  M  +G      T  S+L   A+ G L++G+ +HG  +R
Sbjct: 229 NSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILR 288

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           AGF    +V T+L+ +Y K G+++ A  +F+    ++VV W +MI+  V+ G+ ++A+ +
Sbjct: 289 AGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAV 348

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F++ML  GV+P+  T+   + ACA LG    G  +   + + +L  DV+  NSL++MY+K
Sbjct: 349 FRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAK 408

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +D+++ +F  +  + LVSWNAM+ GYAQNG V EAL  F +MRS N  PDS T+VS+
Sbjct: 409 CGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSL 468

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +   A    +   KWIH+ VIR+     + V T+L+DMY KCG + TA+  F+ M    +
Sbjct: 469 LQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDL 528

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +W+ +I GYG HG G+AA+  ++K LE   KPN + FL  +S+CSH+GLVE+G++ + S
Sbjct: 529 VSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYES 588

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + KD+GI P ++H+  +VDLL RAGR+ EA++  +K   +P + V G +L AC+ + N E
Sbjct: 589 MTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNE 648

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG+  AN +  L P + G  V LA+ YA+ + W+++ +  T M   GL+K PG S +++ 
Sbjct: 649 LGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIH 708

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             + +F++    HPQ + I   L+ L  E+
Sbjct: 709 GTITTFFTDHNSHPQFQEIVCTLKILRKEM 738



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 191/450 (42%), Gaps = 52/450 (11%)

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           S N+ I  +   G   + +  +  ML   V     T    L AC+ L     G+ +H+ +
Sbjct: 28  SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
               L  D  + +SLI+ Y+K    D A  +F  +  + +V W  +I  Y++ GRV EA 
Sbjct: 88  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
           + F +MR + I+P S T++S++  ++EL+   + + +H   I   F  ++ +  +++++Y
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLLFGVSELA---HVQCLHGCAILYGFMSDINLSNSMLNVY 204

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEG-PTKPNDIT 544
            KCG +  +R LFD M+ R + +WN +I  Y   G     + L   M L+G    P    
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFG 264

Query: 545 FLCAISA---------CSHSGLVEEGI----HYFTSL--------KKDYG---IEPVMDH 580
            + +++A         C H  ++  G     H  TSL        K D      E   D 
Sbjct: 265 SVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDK 324

Query: 581 ----YGAMVDLLGRAGRLNEAWDFIQKM---PIEPGITVFGAMLGACKIHKNVELGEKAA 633
               + AM+  L + G  ++A    ++M    ++P      +++ AC    +  LG    
Sbjct: 325 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSIL 384

Query: 634 NRLFELD-PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL-----------QKTPGC 681
             +   + P +      L  +YA     D+ + V  +M ++ L           Q    C
Sbjct: 385 GYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVC 444

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
             + L NE+ S      + P S  I + L+
Sbjct: 445 EALFLFNEMRS----DNQTPDSITIVSLLQ 470



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 30/256 (11%)

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           T  S NA I  ++  G  ++ L  +  M   ++  D++T  S++ A + L++      +H
Sbjct: 25  TTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLH 84

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
             ++ S    + ++ ++LI+ YAK G    AR +FD M ER+V  W  +I  Y   G   
Sbjct: 85  QRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVP 144

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISA--------CSHSGLVEEG----IHYFTSLKKDY 572
            A  LF++M     +P+ +T L  +          C H   +  G    I+   S+   Y
Sbjct: 145 EAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVY 204

Query: 573 G----------IEPVMDH-----YGAMVDLLGRAGRLNEAWDFIQKMPI---EPGITVFG 614
           G          +   MDH     + +++    + G + E    ++ M +   E G   FG
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFG 264

Query: 615 AMLGACKIHKNVELGE 630
           ++L        ++LG 
Sbjct: 265 SVLSVAASRGELKLGR 280


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 387/673 (57%), Gaps = 80/673 (11%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L++C D+  I+ G+ IH  +  N   +D    + +V MY  CG + E  ++FD++ 
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
              +  WN ++     NG+A++              G+F   +S+   +  +G +R    
Sbjct: 164 NEKVFLWNLLM-----NGYAKI--------------GNFRESLSLFKRMRELG-IR---- 199

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
                                       RVE+AR +FD +  R+V+SWNSMI+ YV  G 
Sbjct: 200 ----------------------------RVESARKLFDELGDRDVISWNSMISGYVSNGL 231

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+ + +F++ML  G+  T++  M                          +  ++++ N 
Sbjct: 232 SEKGLDLFEQMLLLGIN-TDLATM--------------------------VSVELTLNNC 264

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MYSK   ++ A  +F  +  +++VSW +MI GYA+ G  + ++  F +M  +++ P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S TM  ++PA A L+ +   + IH  ++R+ F  +  V  AL+DMY KCGA+G AR LFD
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
           M+ E+ + +W VMI GYG HG G  A+  FN+M     +P++++F+  + ACSHSGL++E
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  +F  ++ +  IEP  +HY  +VDLL RAG L++A+ FI+ MPIEP  T++GA+L  C
Sbjct: 445 GWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           +I+ +V+L EK A  +FEL+P+  GY+VLLANIYA A  W+++ K+R  + ++GL+K PG
Sbjct: 505 RIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPG 564

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQEN 739
           CS +E+K +VH F +G + HP + +I   L+     +K  G+ P    ++   +D  +E 
Sbjct: 565 CSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEM 624

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L  HSEK+A+AFG+L+  PG T+ + KNLRVCGDCH   K++S +  R+II+RD +RFH
Sbjct: 625 ALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFH 684

Query: 800 CFKNGVCSCGDYW 812
            FK+G CSC  +W
Sbjct: 685 HFKDGSCSCRGHW 697



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 187/339 (55%), Gaps = 25/339 (7%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L++C  LK +   RRI  +I  + +    +  +KLV ++     L +  R+F+ + ++ 
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMR-------------YDDVAPV-VYNYTYLLKVC 148
             L++ ++ GYAK  +  +++S   RMR             +D++    V ++  ++   
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV--------VNMYAKCGQIEEAYKMFDRMP 200
              G   +G ++  Q+++ G + DL  M  V        ++MY+K G +  A ++F+ M 
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG 286

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER +VSW +++AG+A+ G +++++ L   M +E    + IT+  ILPA A++ +L  G+ 
Sbjct: 287 ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQE 346

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG+ +R GF    +V+ ALVDMY KCG +  ARL+FD +  +++VSW  MIA Y   G 
Sbjct: 347 IHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGY 406

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
             EA+  F +M + G+EP  V+ +  L+AC+  G L+ G
Sbjct: 407 GSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/743 (34%), Positives = 412/743 (55%), Gaps = 15/743 (2%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
           + K+  + +A ++F+ + ++    Y+ ++ GY        A+      R   +    ++Y
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
             +L  CG + +   GK IHG  IV G    +F    +++MY KC +I+ A  +F+   E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-ANVGSL-RIGK 259
            D VSWN+++ G+A+ G  E  L L+ +MH  G R +  T+ S L +   N+ ++   GK
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HGY ++ G D  + V TAL+DMYAK G +  A  +F    ++NVV +N+MIA +++  
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293

Query: 320 NPE-----EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           + +     EA+++F +M  QG++P++ T    +  C  +   E G  +H  + +  + +D
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             + ++LI +YS     +     F+      +VSW  MI GYAQNG+   AL  F ++ +
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA 413

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
              KPD F + +++ A A+++  R  + +H   +++       V  + I MYAK G + +
Sbjct: 414 SGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDS 473

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A+  F+ +    V +W+VMI     HG  K A+ LF  M      PN ITFL  ++ACSH
Sbjct: 474 AKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSH 533

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            GLVEEG+ Y+ S+KKDY ++  + H   +VDLL RAGRL +A +FI          ++ 
Sbjct: 534 GGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWR 593

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            +L  C+I+K++  G+  A +L ELDP E   +VLL NIY  A +     K+R +M+ +G
Sbjct: 594 TLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRG 653

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-----TNSI 729
           ++K PG S +E+ NEVHSF  G   HP S+ IY  LE ++++ +  GY+       T S 
Sbjct: 654 IRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTIST 713

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            +V+  +  N    HSEKLA++FG+++  P + + + KNLRVC DCH   K IS+V  RE
Sbjct: 714 KEVKGTLGVN---HHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKRE 770

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II+RD  RFH FK G CSC DYW
Sbjct: 771 IILRDSLRFHHFKEGSCSCNDYW 793



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 250/508 (49%), Gaps = 17/508 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT L++     G    GK  H  +I   F+  LF +   +N+Y+K G++  A K+FDRM 
Sbjct: 12  YTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMS 71

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER ++S+N +++G+   GF   A+ L +       + D  +   +L A   +    +GK 
Sbjct: 72  ERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKV 131

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG A+  G    V ++  L+DMY KC R++ ARL+F+     + VSWNS+I  Y   G 
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGA 191

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHAC-ADLGDL-ERGIFVHKLLDQLKLGTDVSMT 378
            EE +++  KM   G+     T+  AL +C  +L ++   G  +H    +  L  D+ + 
Sbjct: 192 YEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVG 251

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN-----EALNYFCKMR 433
            +L+ MY+K   +  A  +F     + +V +NAMI G+ Q   ++     EAL  F +M+
Sbjct: 252 TALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQ 311

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + IKP  FT  S+I     +    Y K IHA + +   + + F+ + LI++Y+  G+  
Sbjct: 312 RQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTE 371

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
                F+   +  + +W  MI GY  +G  ++A+ LF ++L    KP++      +SAC+
Sbjct: 372 DQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACA 431

Query: 554 HSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
                  G  +H + ++K   G   ++ +  + + +  ++G L+ A    +++   P + 
Sbjct: 432 DVAAERSGEQVHGY-AVKTGIGTLAIVQN--SQISMYAKSGNLDSAKITFEEIK-NPDVV 487

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFEL 639
            +  M+ +   H +     K A  LFEL
Sbjct: 488 SWSVMICSNAQHGHA----KDAINLFEL 511



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 237/488 (48%), Gaps = 18/488 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C  +K+    + I  L I  GL  Q      L+ ++CK   +  A  +FE   D
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFES-SD 172

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC--GDVGEIRRG 157
           +LD + +++++ GYA+  + ++ +  L++M +  +    +     LK C       +  G
Sbjct: 173 ELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K +HG  +  G  LD+   T +++MYAK G + +A ++F   P +++V +N ++AGF Q 
Sbjct: 233 KTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQT 292

Query: 218 -----GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
                  A  AL L ++M  +G +    T  SI+    ++ +   GK +H +  +    S
Sbjct: 293 EDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              + + L+++Y+  G  E     F+     ++VSW +MIA Y + G  E A+ +F ++L
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             G +P    I   L ACAD+     G  VH    +  +GT   + NS ISMY+K   +D
Sbjct: 413 ASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLD 472

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A   F +++   +VSW+ MI   AQ+G   +A+N F  M+S  I P+  T + V+ A +
Sbjct: 473 SAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS 532

Query: 453 ELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE---RHVT 508
              ++    ++  ++      + NV   T ++D+ ++ G +  A+    ++N     H  
Sbjct: 533 HGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNF--ILNSGFGDHPV 590

Query: 509 TWNVMIDG 516
            W  ++ G
Sbjct: 591 MWRTLLSG 598



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 167/331 (50%), Gaps = 7/331 (2%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D +    ++   +  GS   GK  H + ++  F+  + +    +++Y+K G +  A+ +F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  R+V+S+N +I+ Y   G   +A+ +F +     ++    +    L AC  + D  
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L     LG  V +TN LI MY KC+++D A  +F        VSWN++I GYA
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA--LAELSVIRYAKWIHALVIRSCFEKN 475
           + G   E L    KM    ++ ++FT+ S + +  L   +++ Y K +H   ++   + +
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY-GTHGLGK----AAVELF 530
           + V TAL+DMYAK G +G A  LF     ++V  +N MI G+  T  + K     A++LF
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLF 307

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           ++M     KP+D TF   I  C+H    E G
Sbjct: 308 SQMQRQGIKPSDFTFSSIIKICNHIEAFEYG 338


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/612 (39%), Positives = 360/612 (58%), Gaps = 21/612 (3%)

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           ++L L  R     R     ++ + L + A +G   +  ++H  A+R+G  +    + AL+
Sbjct: 32  ISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALL 91

Query: 282 DMYAKC---------------GRVETA-----RLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           ++  K                G +E+A     R VFD M  R+ VSWN++I    E    
Sbjct: 92  NLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRH 151

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           +EA+ + ++M   G  P   T+   L   A+  D++RG+ VH    +     DV + +SL
Sbjct: 152 QEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSL 211

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           I MY+ C ++D +  +F        V WN+M+ GYAQNG V EAL  F +M    ++P  
Sbjct: 212 IDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVP 271

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T  S+IPA   LS++R  K +HA +IR+ F  N+F+ ++LIDMY KCG V  AR +F+ 
Sbjct: 272 VTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNG 331

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           +    + +W  MI GY  HG    A  LF +M  G  KPN ITFL  ++ACSH+GLV+ G
Sbjct: 332 IQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNG 391

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             YF S+   YG  P ++H  A+ D LGRAG L+EA++FI +M I+P  +V+  +L AC+
Sbjct: 392 WKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACR 451

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +HKN  L E+ A ++FEL+P   G HV+L+N+Y+A+  W++ A++R  M  KG++K P C
Sbjct: 452 VHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPAC 511

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E+KN++H F +    HP   RI   L    +++   GYVP+   +  D+E+  +  +
Sbjct: 512 SWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREV 571

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLAI FG++++ PG+TI + KNLRVC DCH ATK+IS +  REI+VRD++RFH 
Sbjct: 572 LCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHR 631

Query: 801 FKNGVCSCGDYW 812
           FK+G CSCGD+W
Sbjct: 632 FKDGNCSCGDFW 643



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 221/439 (50%), Gaps = 26/439 (5%)

Query: 122 AVSFLIRMRYDDVAP---VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           A+S  ++MR   VAP   V  +    LK C  +G       +H   I +G   D F    
Sbjct: 31  AISLFLQMR-ASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 89

Query: 179 VVNMYAKC---------------GQIEEA-----YKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++N+  K                G +E A      K+FD M ERD VSWNT++ G A++ 
Sbjct: 90  LLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHK 149

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + AL +V  M  +G   D  T+ ++LP  A    ++ G  VHGYA++ GFD+ V V +
Sbjct: 150 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGS 209

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +L+DMYA C +++ +  VFD     + V WNSM+A Y + G+ EEA+ IF++ML  GV P
Sbjct: 210 SLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRP 269

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT    + A  +L  L  G  +H  L + +   ++ +++SLI MY KC  VD A  +F
Sbjct: 270 VPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF 329

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
           + +Q   +VSW AMI+GYA +G   EA   F +M   N+KP+  T ++V+ A +   ++ 
Sbjct: 330 NGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVD 389

Query: 459 YA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-WNVMIDG 516
              K+ +++  +  F  ++    AL D   + G +  A      M  +  ++ W+ ++  
Sbjct: 390 NGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 449

Query: 517 YGTHGLGKAAVELFNKMLE 535
              H     A E+  K+ E
Sbjct: 450 CRVHKNTVLAEEVAKKIFE 468



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 185/323 (57%), Gaps = 2/323 (0%)

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           +VF+ + ++    ++T++ G A+     +A+S +  M  D   P  +  + +L +  +  
Sbjct: 125 KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA 184

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +I+RG  +HG  I NGF  D+F  + +++MYA C Q++ + K+FD   + D V WN+++A
Sbjct: 185 DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLA 244

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+AQNG  E AL +  RM + G R   +T  S++PA  N+  LR+GK +H Y +RA F+ 
Sbjct: 245 GYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND 304

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + +S++L+DMY KCG V+ AR VF+G++S ++VSW +MI  Y   G   EA  +F++M 
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              V+P ++T +  L AC+  G ++ G  + + + +Q      +    +L     +   +
Sbjct: 365 LGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDL 424

Query: 392 DRAADIFSKLQGKTLVS-WNAMI 413
           D A +  S+++ K   S W+ ++
Sbjct: 425 DEAYNFISEMKIKPTSSVWSTLL 447



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 147/294 (50%), Gaps = 4/294 (1%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C  +K    +    IK+G  +     + L+ ++     +  + +VF+   D    L+++M
Sbjct: 183 CADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSM 242

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L GYA+  S+++A+    RM    V PV   ++ L+   G++  +R GK++H  LI   F
Sbjct: 243 LAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARF 302

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           + ++F  + +++MY KCG ++ A ++F+ +   D+VSW  ++ G+A +G    A  L  R
Sbjct: 303 NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFER 362

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M     + + IT +++L A ++ G +  G K  +  + + GF   +    AL D   + G
Sbjct: 363 MELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAG 422

Query: 289 RVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            ++ A      MK +   S W++++ A     N   A  + +K+ +  +EP ++
Sbjct: 423 DLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE--LEPKSM 474


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/632 (39%), Positives = 371/632 (58%), Gaps = 2/632 (0%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY+K      A  +    P R +V+W  +++G  QNG+   AL   ++M  E  + +  T
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
                 A   +     GK +H  A++ G  +   V  +  DMY+K G    A+ +FD M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            RNV  WN+ I+  V  G P +A+  F +    G EP  +T    L+ACAD   L+ G  
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H L+ +     DVS+ N +I +Y KCK+V+ A  +F+ +  +  VSW  M+    QN  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             +A   F   R + I+   + + SVI A A +S + + + +HAL +++C E ++FV +A
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+DMY KCG++     +F  M ER++ +WN MI GY   G    A+ LF +M +     N
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVAN 359

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            +T +C +SACS  G V+ G   F S++  Y IEP  +HY  + D+LGRAG +  A++F+
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
           QKMPI P I+V+GA+L AC+++   ELG+ AA+ LF+LDP + G HVLL+N++AAA  WD
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWD 479

Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
           +   VR  M+  G++K  GCS V  KN+VH F +  T H ++  I   L  L  E++AAG
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAG 539

Query: 722 YVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           Y+PDTN +++D+E+  +   +  HSEK+A+AFGL+   PG  I I KNLR+CGDCH+A K
Sbjct: 540 YMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFK 599

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +IS + GREIIVRD +RFH F++  CSC D+W
Sbjct: 600 FISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 221/458 (48%), Gaps = 6/458 (1%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++ K +  + A  + +  P +    +  ++ G  +      A+ +  +MR +++ P  + 
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +    K    +     GK+IH   +  G   D F      +MY+K G   EA ++FD MP
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R++  WN  ++    +G    A+D        G   D IT  + L A A+   L +G+ 
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  +R+GF+  V+V+  ++D+Y KC  VE A +VF+GM  RN VSW +M+AA  +   
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+A  +F     +G+E T+  +   + A A +  LE G  VH L  +  +  D+ + ++
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY KC  ++    +F ++  + LVSWNAMI GYA  G V+ A+  F +M+S+ +  +
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-AN 359

Query: 441 SFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T++ V+ A +    ++    I  ++  R   E        + DM  + G V  A    
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419

Query: 500 DMMNER-HVTTWNVMIDG---YGTHGLGKAAVELFNKM 533
             M  R  ++ W  +++    YG   LGK A +   K+
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKL 457



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 177/360 (49%), Gaps = 5/360 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I  + +K G  +          ++ K     +A R+F+ +P +  A+++  +      
Sbjct: 78  KQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLD 137

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A+   I  R     P +  +   L  C D   +  G+++HG +I +GF  D+   
Sbjct: 138 GRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVA 197

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            G++++Y KC ++E A  +F+ M  R+ VSW T+VA   QN   E A  +     +EG  
Sbjct: 198 NGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIE 257

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
                + S++ A A +  L  G++VH  A++A  +  + V +ALVDMY KCG +E    V
Sbjct: 258 LTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQV 317

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  M  RN+VSWN+MI+ Y   G+ + AM +F++M  + V    VT++  L AC+  G +
Sbjct: 318 FHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAV 376

Query: 357 ERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMI 413
           + G  IF   + D+ ++         +  M  +   V+RA +   K+  +  +S W A++
Sbjct: 377 KLGNEIF-ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALL 435


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/688 (36%), Positives = 391/688 (56%), Gaps = 21/688 (3%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+       +R G ++HG +   GF  D      +++MY KCG+++ A ++F  M +R+
Sbjct: 10  LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVH 262
           +VSW  ++ GF ++G A   L L+  M        +  T+ + L A   VG    G  +H
Sbjct: 70  VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIH 129

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNP 321
           G  +RAG+     V+++LV +Y+K GR+  AR VFDG      + +WN+M++ Y   G+ 
Sbjct: 130 GLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189

Query: 322 EEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT--DVSM 377
            +A+ +F++M   +   +P   T    L AC+ LG    G  VH  +      T  +  +
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L+ MY KC+++  A  +F +L+ K ++ W A+++G+AQ G+V EAL  F +      
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA 309

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +PDS  + SV+  LA+ +++   + +H   I+     +V    +++DMY KCG    A  
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAER 369

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  M   +V +W  M++G G HGLG+ AV LF +M  G  +P+++T+L  +SACSH+GL
Sbjct: 370 MFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGL 429

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+E   YF+ +++D  + P  +HY  MVDLLGRAG L EA D I+ MP+EP + V+  +L
Sbjct: 430 VDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLL 489

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC++HK+V +G +A + L  +D D    +V L+N+ A A  W +  KVR  M ++GL+K
Sbjct: 490 SACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKK 549

Query: 678 TPGCSLVELKNEVHSFYSGSTK---HPQS---KRIYTFLETLIDEIKAAGYVPDTN--SI 729
             GCS VE+  EVH FY G  +   HPQ+   +R+   +ET + E    GY  D    ++
Sbjct: 550 QGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMRE--QLGYNADDARFAL 607

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNS-----SPGSTIHIRKNLRVCGDCHNATKYISL 784
           HDV++  +   L +HSE+LA+   LL +       G  I + KNLRVCGDCH   K +S 
Sbjct: 608 HDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSA 667

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           V  R ++VRD +RFH F++G CSC DYW
Sbjct: 668 VVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 239/511 (46%), Gaps = 22/511 (4%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+   ++   I K G     +    L+ ++ K   L  A  VF  + D+    +  ++
Sbjct: 18  SSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALM 77

Query: 111 KGYAKFASLDDAVSFLIRMRY-DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
            G+ +       +  L  MR   + AP  Y  +  LK C  VG+   G  IHG  +  G+
Sbjct: 78  VGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGY 137

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVT 228
                  + +V +Y+K G+I +A ++FD       + +WN +V+G+A  G    AL +  
Sbjct: 138 QEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFR 197

Query: 229 RM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMY 284
            M  HE   + D  T  S+L A + +G+ R G  VH     +GF +  N  ++ ALVDMY
Sbjct: 198 EMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMY 257

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KC R+  A  VF+ ++ +NV+ W +++  + + G   EA+ +F++    G  P +  + 
Sbjct: 258 VKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLS 317

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             +   AD   +E+G  VH    +   GTDVS  NS++ MY KC   D A  +F +++  
Sbjct: 318 SVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAP 377

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +VSW  M+ G  ++G   EA+  F +MR+  ++PD  T ++++ A +   ++   +   
Sbjct: 378 NVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYF 437

Query: 465 ALVIRSCFEKNVFVM------TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGY 517
                SC  ++  V         ++D+  + G +  AR L   M  E  V  W  ++   
Sbjct: 438 -----SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSAC 492

Query: 518 GTH---GLGKAAVELFNKMLEGPTKPNDITF 545
             H    +G+ A ++   M +G    N +T 
Sbjct: 493 RVHKDVAVGREAGDVLLAM-DGDNPVNYVTL 522



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 202/424 (47%), Gaps = 22/424 (5%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  +L A A   SLR G  +HG   + GF S   +   L+DMY KCG ++ A  VF GM+
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGI 360
            RNVVSW +++  ++  G+    +R+  +M       P   T+  +L AC  +GD   G+
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQN 419
            +H L  +        + +SL+ +YSK  ++  A  +F     G  + +WNAM+ GYA  
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 420 GRVNEALNYFCKMR--SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE--KN 475
           G   +AL  F +MR      +PD FT  S++ A + L   R    +HA +  S F    N
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             +  AL+DMY KC  +  A  +F+ +  ++V  W  ++ G+   G    A+ELF +   
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
              +P+       +   +   LVE+G  +H +  +K   G +    +  ++VD+  + G 
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCY-GIKDPTGTDVSAGN--SIVDMYLKCGL 363

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE------LDPDEGGYH 647
            +EA    ++M   P +  +  M+     H    LG +A   LFE      ++PDE  Y 
Sbjct: 364 PDEAERMFREMRA-PNVVSWTTMVNGLGKHG---LGREAVA-LFEEMRAGGVEPDEVTYL 418

Query: 648 VLLA 651
            LL+
Sbjct: 419 ALLS 422



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 13/281 (4%)

Query: 44  ALLLEVCTSL---KELRRILPLIIKSGL--CDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           A LL+ C+ L   +E  ++   +  SG       +    LV ++ K   L  A +VFE +
Sbjct: 214 ASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL 273

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             K    +  ++ G+A+   + +A+    R       P  +  + ++ V  D   + +G+
Sbjct: 274 ERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 333

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H   I +    D+ A   +V+MY KCG  +EA +MF  M   ++VSW T+V G  ++G
Sbjct: 334 QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHG 393

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS- 277
               A+ L   M   G   D +T +++L A ++ G +   +       R   D  V    
Sbjct: 394 LGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR---DRTVRPKA 450

Query: 278 ---TALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
                +VD+  + G +  AR +   M     V  W ++++A
Sbjct: 451 EHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 491


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 363/584 (62%), Gaps = 5/584 (0%)

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           +G   +F    S+L    +  ++R G+ VH + ++  ++  V + T L+ +Y KC  +  
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR V D M  RNVVSW +MI+ Y + G   EA+ +F +ML  G  P   T    L +C  
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
               + G  +H L+ +    + + + +SL+ MY+K  K+  A  +F  L  + +VS  A+
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I GYAQ G   EAL+ F +++ + ++ +  T  SV+ AL+ L+ + + + +H+ V+R+  
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
              V +  +LIDMY+KCG++  +R +FD M ER V +WN M+ GY  HGLG+ AVELF  
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 303

Query: 533 ML-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLG 589
           M  E   KP+ +TFL  +S CSH G+ + G+  F  +  +KD G EP ++HYG +VDL G
Sbjct: 304 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFG 362

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAGR+ EA++FI+KMP EP   ++G++LGAC++H+NV +GE  A RL E++ +  G +V+
Sbjct: 363 RAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI 422

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+N+YA+A  WD +  VR +M++K + K PG S +EL   +H+F++    HP+ + ++  
Sbjct: 423 LSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAK 482

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           +  L  +IK AGYVP+ + + +DV+D  +E +L  HSEKLA+AFGL+ +  G+ + I KN
Sbjct: 483 VRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKN 542

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR+C DCHN  K++S V GRE+ +RD +RFH    G CSCGDYW
Sbjct: 543 LRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 205/384 (53%), Gaps = 4/384 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L  C     IR G+ +H  +I   +   ++  T ++ +Y KC  + +A ++ D MP
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++VSW  +++G++Q G+A  AL L   M   G   +  T  ++L +  +    ++G+ 
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   ++  F+S + V ++L+DMYAK G++  AR VFDG+  R+VVS  ++I+ Y + G 
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ +F+++  +G+    VT    L A + L  L+ G  VH  + + KL   V + NS
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKP 439
           LI MYSKC  +  +  IF  +  +T++SWNAM++GY+++G   EA+  F  M+ +N +KP
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 312

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVI--RSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           DS T ++V+   +   +      I   ++  +  FE  +     ++D++ + G V  A  
Sbjct: 313 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372

Query: 498 LFDMMN-ERHVTTWNVMIDGYGTH 520
               M  E     W  ++     H
Sbjct: 373 FIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 202/367 (55%), Gaps = 4/367 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           T+++E +R+   +IK+        +T+L+ L+ K   L DA RV + +P++    +  M+
Sbjct: 24  TAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMI 83

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY++     +A+   + M     AP  + +  +L  C      + G++IH  +I   F 
Sbjct: 84  SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 143

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +F  + +++MYAK G+I EA ++FD +PERD+VS   I++G+AQ G  E ALDL  R+
Sbjct: 144 SHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 203

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             EG R +++T  S+L A++ + +L  G+ VH + +RA     V +  +L+DMY+KCG +
Sbjct: 204 QREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSL 263

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHA 349
             +R +FD M  R V+SWN+M+  Y + G   EA+ +F+ M ++  V+P +VT +  L  
Sbjct: 264 TYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 323

Query: 350 CADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TL 406
           C+  G  +RG  IF   +  +     ++     ++ ++ +  +V+ A +   K+  + T 
Sbjct: 324 CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 383

Query: 407 VSWNAMI 413
             W +++
Sbjct: 384 AIWGSLL 390


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/706 (34%), Positives = 392/706 (55%), Gaps = 11/706 (1%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L   +K   L++A  F   M    V+  +Y+Y  L + C ++  +  G+ +H ++ +   
Sbjct: 53  LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIE 112

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +     V+ MY +CG +E+A K+FD M + + VS  T+++ +A+ G  + A+ L +R
Sbjct: 113 NPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSR 172

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M E G +       ++L ++ N  +L IG+ +H + +RAG  S  ++ T +V+MY KCG 
Sbjct: 173 MLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGW 232

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +  A+ VFD M  +  V+W  ++  Y + G   +A+++F  ++ +GVE  +      L A
Sbjct: 233 LVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKA 292

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA L +L  G  +H  + +L L  +VS+   L+  Y KC   + A   F +++    VSW
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           +A+I GY Q  +  EA+  F  +RSKN +  +SFT  S+  A + L+       +HA  I
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +     + +  +ALI MY+KCG +  A  +F+ M+   +  W   I G+  +G    A+ 
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALR 472

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF KM+    KPN +TF+  ++ACSH+GLVE+G HY  ++ + Y + P +DHY  M+D+ 
Sbjct: 473 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIY 532

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
            R+G L+EA  F++ MP EP    +   L  C  HKN+ELG+ A   L +LDP++   +V
Sbjct: 533 ARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYV 592

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           L  N+Y  A  W++ A+V  +M ++ L+K   CS ++ K ++H F  G   HPQS+ IY 
Sbjct: 593 LPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIY- 651

Query: 709 FLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLL--NSSPGSTIHIR 766
                 +++K      + +         +E LL  HSE+LAIAFGL+  N +  + I + 
Sbjct: 652 ------EKLKEFDGFMEGDMFQCSMTERREQLL-DHSERLAIAFGLISVNGNARAPIKVF 704

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLR C DCH   K++SLVTG EI++RD  RFH FK G CSC DYW
Sbjct: 705 KNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 245/497 (49%), Gaps = 9/497 (1%)

Query: 46  LLEVCTSLKELR--RILPLIIKSGLCDQH-LFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L E C  L+ L   R+L   ++ G+ +   L Q  ++ ++C+  SL DA ++F+ + D  
Sbjct: 87  LFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLN 146

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
                TM+  YA+   LD AV    RM      P    YT LLK   +   +  G++IH 
Sbjct: 147 AVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHA 206

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  G   +    TG+VNMY KCG +  A ++FD+M  +  V+W  ++ G+ Q G A  
Sbjct: 207 HVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARD 266

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L   +  EG   D      +L A A++  LR GK +H    + G +  V+V T LVD
Sbjct: 267 ALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVD 326

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNV 341
            Y KC   E+A   F  ++  N VSW+++I+ Y +    EEA++ F+ +  +  V   + 
Sbjct: 327 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSF 386

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T      AC+ L D   G  VH    +  L       ++LI+MYSKC  +D A ++F  +
Sbjct: 387 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESM 446

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +V+W A I G+A  G  +EAL  F KM S  +KP+S T ++V+ A +   ++   K
Sbjct: 447 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 506

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGT 519
            ++  ++ +      +     +ID+YA+ G +  A R + +M  E    +W   + G  T
Sbjct: 507 HYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWT 566

Query: 520 HG---LGKAAVELFNKM 533
           H    LGK A E   ++
Sbjct: 567 HKNLELGKIAGEELRQL 583



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 204/436 (46%), Gaps = 15/436 (3%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N  +   +++G    A +    M + G      +   +  A   + SL  G+ +H   MR
Sbjct: 50  NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN-RMR 108

Query: 268 AGFDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
            G ++  V +   ++ MY +CG +E A  +FD M   N VS  +MI+AY E G  ++A+ 
Sbjct: 109 MGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVG 168

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F +ML+ G +P +      L +  +   L+ G  +H  + +  L ++ S+   +++MY 
Sbjct: 169 LFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYV 228

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  +  A  +F ++  K  V+W  +++GY Q GR  +AL  F  + ++ ++ DSF    
Sbjct: 229 KCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSV 288

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A A L  +R+ K IHA V +   E  V V T L+D Y KC +  +A   F  + E +
Sbjct: 289 VLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 348

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGIH-Y 564
             +W+ +I GY      + AV+ F  +  +     N  T+     ACS       G   +
Sbjct: 349 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH 408

Query: 565 FTSLKKDYGIEPVMDHYG--AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
             ++K+      +   YG  A++ +  + G L++A +  + M   P I  + A +     
Sbjct: 409 ADAIKRSL----IGSQYGESALITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAY 463

Query: 623 HKNVELGEKAANRLFE 638
           + N       A RLFE
Sbjct: 464 YGNA----SEALRLFE 475


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/770 (34%), Positives = 415/770 (53%), Gaps = 54/770 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +C    + +A  +FE +P++    +  M+ GY        A      M  + + P 
Sbjct: 163 MLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPE 222

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-CGQIEEAYKMF 196
             N   +L     +G+    + IH  +   GF  D+   T ++N Y K    ++ A K F
Sbjct: 223 QPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFF 282

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           + M  R+  +W+TI+A  +Q G  + A  +  R                L +V +  S+ 
Sbjct: 283 EGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR--------------DPLKSVPSRTSML 328

Query: 257 IGKAVHGYAMRAG--FDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            G A +G    A   FD I    V    A++  Y +   V+ A  +F+ M  RN +SW  
Sbjct: 329 TGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAG 388

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MIA Y   G  E+A+   Q +  +G+ P+  ++  +  AC+++  LE G  VH L  +  
Sbjct: 389 MIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAG 448

Query: 371 LGTDVSMTNSLISMYSKCKKV-------------------------------DRAADIFS 399
              +  + N+LI++Y K + +                               D A D+F+
Sbjct: 449 CQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            +    +VSW  +I   AQ  + NEA+  F  M  +   P+   +  ++     L   + 
Sbjct: 509 NMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQL 568

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + IH + I+   +  + V  AL+ MY KC +  + + +FD M ER + TWN +I GY  
Sbjct: 569 GQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-VFDSMEERDIFTWNTIITGYAQ 627

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HGLG+ A+ ++  M+     PN++TF+  + ACSHSGLV+EG  +F S+  DYG+ P+++
Sbjct: 628 HGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLE 687

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  MVDLLGRAG +  A  FI  MPIEP   ++ A+LGACKIHKNVE+G +AA +LF +
Sbjct: 688 HYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSI 747

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +P   G +V+L+NIY++  MWD++AKVR +M+++G+ K PGCS +++KN++HSF +G  +
Sbjct: 748 EPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEE 807

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           H Q + IY  L  L   +KA GYVPDT+ + HD+++  +E+ L  HSEKLA+A+GLL + 
Sbjct: 808 HEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTP 867

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
            G  I I KNLR+CGDCH   K++S VT REI VRD +RFH F+NG CSC
Sbjct: 868 KGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 258/560 (46%), Gaps = 72/560 (12%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA------SLDDAVSFLIR 128
           Q+  +    +   L +A  VF+ +P +    +++M+  Y          SL DA+S    
Sbjct: 36  QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAIS---- 91

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
                    +   T LL      G +R  + +   + V     +  A   +V  Y + G 
Sbjct: 92  ------GGNLRTGTILLSGYARAGRVRDARRVFDGMGVR----NTVAWNAMVTCYVQNGD 141

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--------------- 233
           I  A K+FD MP RD+ SWNT++ G+  +   E A +L  RM E                
Sbjct: 142 ITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLI 201

Query: 234 ---GRRGDFI-------------TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              GR  D                +VS+L AV ++G   I +++H    + GF+  V V 
Sbjct: 202 EQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261

Query: 278 TALVDMYAK-CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           TA+++ Y K    +++A   F+GM +RN  +W+++IAA  + G  ++A  ++Q+   + V
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV 321

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P+  +++  L     + D +       L DQ+     VS  N++I+ Y + + VD A D
Sbjct: 322 -PSRTSMLTGLARYGRIDDAK------ILFDQIHEPNVVSW-NAMITGYMQNEMVDEAED 373

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F+++  +  +SW  MI GYA+NGR  +AL     +  K + P   ++ S   A + +  
Sbjct: 374 LFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEA 433

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +   K +H+L +++  + N +V  ALI +Y K  ++G+ R +FD M  +   ++N  +  
Sbjct: 434 LETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSA 493

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL--KKDYGI 574
              + L   A ++FN M      P+ +++   ISAC+ +    E +  F S+  +++   
Sbjct: 494 LVQNNLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPN 549

Query: 575 EPVMDHYGAMVDLLGRAGRL 594
            P+      +  LLG +G L
Sbjct: 550 PPI------LTILLGLSGNL 563



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 199/453 (43%), Gaps = 98/453 (21%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           A +  +    + G++ EA ++FD MP RD+++WN+++  +  NG           M + G
Sbjct: 35  AQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG-----------MPDAG 83

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
           R        S+  A++  G+LR G                   T L+  YA+ GRV  AR
Sbjct: 84  R--------SLADAISG-GNLRTG-------------------TILLSGYARAGRVRDAR 115

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VFDGM  RN V+WN+M+  YV+ G+   A ++F  M      P+               
Sbjct: 116 RVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM------PSR-------------- 155

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
                              DVS  N++++ Y   + ++ A ++F ++  +  VSW  MI 
Sbjct: 156 -------------------DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMIS 196

Query: 415 GYA---QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           GY    Q+GR   A + F  M  + + P+   +VSV+ A+  L      + IH LV ++ 
Sbjct: 197 GYVLIEQHGR---AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTG 253

Query: 472 FEKNVFVMTALIDMYAK-CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
           FE++V V TA+++ Y K    + +A   F+ M  R+  TW+ +I      G    A  ++
Sbjct: 254 FERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY 313

Query: 531 NK--MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
            +  +   P++ + +T L        + ++ + IH           EP +  + AM+   
Sbjct: 314 QRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH-----------EPNVVSWNAMITGY 362

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            +   ++EA D   +MP    I+  G + G  +
Sbjct: 363 MQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/578 (41%), Positives = 356/578 (61%), Gaps = 2/578 (0%)

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           R D  T    L A A +G LR G++V   A  AG+   V V ++L+ +YA+ G +  A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF  M  R+ V+W++M+A +V  G P +A++++++M + GV+   V ++  + AC    +
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +  G  VH  L +  +  DV    SL+ MY+K   +D A  +F  +  +  VSW+AMI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +AQNG+ +EAL  F  M++  I+PDS  +VS + A + +  ++  + +H  ++R  F+ N
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             + TA IDMY+KCG++ +A+ LF+M+++R +  WN MI   G HG G+ A+ LF +M E
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +P+  TF   +SA SHSGLVEEG  +F  +   + I P   HY  +VDLL R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           EA D +  M  EP + ++ A+L  C  +K +ELGE  A+ + EL PD+ G   L++N+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
           A   WDK+ +VR +M+  G +K PGCS +E++   H F      HPQ + I + +  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 716 EIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
           E++  GY+P T  + HD+E+ V+E  LS HSE+LAIAFGLLN+ PG+ + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH+A KYIS +  REI+VRD  RFH FK+GVCSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 235/447 (52%), Gaps = 19/447 (4%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +T  L  C  +G++R G+ +  +    G+  D+F  + ++++YA+ G + +A K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F RMP RD V+W+T+VAGF   G    A+ +  RM E+G +GD + ++ ++ A     ++
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R+G +VHG+ +R G    V  +T+LVDMYAK G ++ A  VF  M  RN VSW++MI+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  +EA+R+F+ M   G++P +  ++ AL AC+++G L+ G  VH  + + +   + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  + I MYSKC  +  A  +F+ +  + L+ WNAMI     +GR  +AL  F +M   
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMT-------ALIDMYA 487
            ++PD  T  S++ AL+   ++   K W   +V       N F +T        L+D+ A
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMV-------NHFKITPAEKHYVCLVDLLA 457

Query: 488 KCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           + G V  A  L   M  E  V  W  ++ G   +   +    + + +LE   +P+D+  L
Sbjct: 458 RSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVL 515

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYG 573
             +S    +    + +     L KD G
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSG 542


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/700 (37%), Positives = 384/700 (54%), Gaps = 75/700 (10%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           Y Y  L++ C         K++H  ++  GF  D++    ++N ++ C  + +A ++F+ 
Sbjct: 214 YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNE 273

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
               D VSWN+I+AG+ + G  E A  +  +M E                          
Sbjct: 274 SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPER------------------------- 308

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
                        SI+  S +++ ++   G V  A  +FD M  +++V+W+++IA + + 
Sbjct: 309 -------------SII-ASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQN 354

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD--VS 376
              EEA+R F  M   GV    V  + AL ACA+L  +  G  +H L   LK+GT+  ++
Sbjct: 355 EMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL--SLKIGTESYIN 412

Query: 377 MTNSLISMYSKCKK-------------------------------VDRAADIFSKLQGKT 405
           + N+LI MYSKC                                 VD A  IF  +  K 
Sbjct: 413 LQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKD 472

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW++MI GYAQN   +E L  F +M+    KPD  T+VSVI A A L+ +   KW+HA
Sbjct: 473 VVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHA 532

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            + R+    NV + T LIDMY KCG V TA  +F  M E+ ++TWN +I G   +GL ++
Sbjct: 533 YIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVES 592

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           ++++F+ M +    PN+ITF+  + AC H GLV+EG H+F S+  D+ I+P + HYG MV
Sbjct: 593 SLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV 652

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG+L EA + + +MP+ P +  +GA+LGACK H + E+G +   +L EL PD  G
Sbjct: 653 DLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDG 712

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
           +HVLL+NIYA+   WD + ++R +M K  + K PGCS++E    +H F +G   HP    
Sbjct: 713 FHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDA 772

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           I   L  +  ++K  GY PD N +  DV++  +E+ L  HSEKLAIAFGL+N SP + I 
Sbjct: 773 IEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIR 832

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           I KNLR+C DCH A K IS    R+I+VRD HRFH F+ G
Sbjct: 833 IMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 167/376 (44%), Gaps = 33/376 (8%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++ LF     + +A ++F+ + +K    +  ++  + +    ++A+   + M    V   
Sbjct: 316 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 375

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                  L  C ++  +  GK IH   +  G    +     ++ MY+KCG I  A K+FD
Sbjct: 376 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 435

Query: 198 RMPERDLVSWN-------------------------------TIVAGFAQNGFAELALDL 226
                DL+SWN                               ++++G+AQN   +  L L
Sbjct: 436 EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLAL 495

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M   G + D  T+VS++ A A + +L  GK VH Y  R G    V + T L+DMY K
Sbjct: 496 FQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMK 555

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG VETA  VF GM  + + +WN++I      G  E ++ +F  M    V P  +T M  
Sbjct: 556 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 615

Query: 347 LHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGK 404
           L AC  +G ++ G    + ++   K+  +V     ++ +  +  K+  A ++ +++    
Sbjct: 616 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTP 675

Query: 405 TLVSWNAMILGYAQNG 420
            + +W A++    ++G
Sbjct: 676 DVATWGALLGACKKHG 691



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 136/259 (52%), Gaps = 4/259 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K N + +A  +F+ +P+K    + +M+ GYA+    D+ ++    M+     P 
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 ++  C  +  + +GK +H  +  NG ++++   T +++MY KCG +E A ++F 
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M E+ + +WN ++ G A NG  E +LD+ + M +     + IT + +L A  ++G +  
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 627

Query: 258 GKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
           G+  H Y+M        NV     +VD+  + G+++ A  + + M  + +V +W +++ A
Sbjct: 628 GQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686

Query: 315 YVEGGNPEEAMRIFQKMLD 333
             + G+ E   R+ +K+++
Sbjct: 687 CKKHGDSEMGRRVGRKLIE 705



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 44/283 (15%)

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY++  +P  A  +++ ML   +   N T    + AC+          VH  + +L   +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV + N+LI+ +S C  +  A  +F++      VSWN+++ GY + G V EA + + +M 
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
                                                  E+++    ++I ++   G V 
Sbjct: 307 ---------------------------------------ERSIIASNSMIVLFGMRGLVV 327

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  LFD M E+ + TW+ +I  +  + + + A+  F  M +     +++  + A+SAC+
Sbjct: 328 EACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 387

Query: 554 HSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +  +V  G  IH   SL    G E  ++   A++ +  + G +
Sbjct: 388 NLLVVNMGKLIH---SLSLKIGTESYINLQNALIYMYSKCGDI 427


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/756 (33%), Positives = 425/756 (56%), Gaps = 35/756 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T+ +  F     + DA ++F+ +      +++ M+KG+       +A+    RM +  V 
Sbjct: 64  TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              + Y +++K    +  +  GK+IH  +I   F  D++    ++++Y K G   +A K+
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKV 183

Query: 196 FDRMPERDLVSWNTIVAGFA--QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           F+ MPERD+VSWN++++G+   ++GF  L L     M + G + D  + +S L A ++V 
Sbjct: 184 FEEMPERDIVSWNSMISGYLALEDGFRSLML--FKEMLKFGFKPDRFSTMSALGACSHVY 241

Query: 254 SLRIGKAVHGYAMRAGFDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           S  +GK +H +A+R+  ++  V V T+++DMY+K G V  A  +F  +  RN+V+WN +I
Sbjct: 242 SPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLI 301

Query: 313 AAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGD-------LERGIFVHK 364
             Y       +A   FQKM +Q G++P  +T++  L ACA L         + RG   H 
Sbjct: 302 GCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRRGFLPHI 361

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           +LD            +LI MY +  ++  A  IF ++  K L+SWN++I  Y QNG+   
Sbjct: 362 VLD-----------TALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYS 410

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F K+   ++ PDS T+ S++PA AE   +   + IHA +++S +  N  ++ +L+ 
Sbjct: 411 ALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVH 470

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYA CG +  AR  F+ +  + V +WN +I  Y  HG G+ +V LF++M+     PN  T
Sbjct: 471 MYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKST 530

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F   ++ACS SG+V+EG  YF S+K++YGI+P ++HYG M+DL+GR G  + A  FI++M
Sbjct: 531 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREM 590

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P  P   ++G++L A + H ++ + E AA ++F+++ D  G +VLL N+YA A  W+ + 
Sbjct: 591 PFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVN 650

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +++ +ME KG+ +T   S VE K++ H   +G   H ++ +IY  L+ +   I   G   
Sbjct: 651 RIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMI---GEEE 707

Query: 725 DTNS-IHDVEDYVQENLLSS-------HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           + +S +H V    +E L  S       HS +LA  FGL+++  G T+ +R N R+C  CH
Sbjct: 708 EEDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCH 767

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              +  S +T REI+V D   FH F NG CSCG+YW
Sbjct: 768 EFLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 222/404 (54%), Gaps = 6/404 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+E ++I  ++IK            L+SL+ K     DA +VFE +P++    +++M+
Sbjct: 140 SSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMI 199

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY        ++     M      P  ++    L  C  V     GKE+H   + +   
Sbjct: 200 SGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIE 259

Query: 171 L-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             D+  MT +++MY+K G++  A ++F  + +R++V+WN ++  +A+N     A     +
Sbjct: 260 TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQK 319

Query: 230 MHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M E+ G + D IT++++LPA A    +  G+ +HGYAMR GF   + + TAL+DMY + G
Sbjct: 320 MSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWG 375

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           ++++A ++FD +  +N++SWNS+IAAYV+ G    A+ +FQK+ D  + P + TI   L 
Sbjct: 376 QLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILP 435

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           A A+   L  G  +H  + + + G++  + NSL+ MY+ C  ++ A   F+ +  K +VS
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVS 495

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           WN++I+ YA +G    ++  F +M +  + P+  T  S++ A +
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACS 539



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 2/250 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  C  L E R I    ++ G     +  T L+ ++ ++  L  A  +F+ I +K    
Sbjct: 336 LLPACAIL-EGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLIS 394

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++++  Y +      A+    ++    + P       +L    +   +  G++IH  ++
Sbjct: 395 WNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV 454

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            + +  +   +  +V+MYA CG +E+A K F+ +  +D+VSWN+I+  +A +GF  +++ 
Sbjct: 455 KSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVC 514

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMY 284
           L + M       +  T  S+L A +  G +  G        R  G D  +     ++D+ 
Sbjct: 515 LFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLI 574

Query: 285 AKCGRVETAR 294
            + G   +A+
Sbjct: 575 GRTGNFSSAK 584


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/577 (40%), Positives = 356/577 (61%), Gaps = 4/577 (0%)

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            DFI I+ +    A  G++   KA HG  MR      V +S  L++ Y+KCG VE AR V
Sbjct: 64  SDFIEILQL---CARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FDGM  R++VSWN+MI  Y       EA+ IF +M ++G + +  TI   L AC    D 
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDA 180

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                +H L  +  L  ++ +  +L+ +Y+KC  ++ A  +F  +Q K+ V+W++M+ GY
Sbjct: 181 LECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGY 240

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            Q+    EAL  + + +  +++ + FT+ SVI A + L+ +   K +HA++ +S F  NV
Sbjct: 241 VQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNV 300

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           FV ++ +DMYAKCG++  +  +F  + E+++  WN +I G+  H   K  + LF KM + 
Sbjct: 301 FVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQD 360

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN++TF   +S C H+GLVEEG  +F  ++  YG+ P + HY  MVD+LGRAG L+E
Sbjct: 361 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 420

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A++ I+ +P EP  +++G++L +C++ KN+EL E AA +LFEL+P+  G HVLL+NIYAA
Sbjct: 421 AYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAA 480

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
              W+++AK R ++    ++K  G S +++K++VH F  G + HP+ + I T L+ L+ E
Sbjct: 481 NKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIE 540

Query: 717 IKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           ++  GY P   + +HDVE   +E LL  HSEKLA+ FGL+    GST+ I KNLR+C DC
Sbjct: 541 LRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDC 600

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           H   K  S+ T R IIVRD +RFH F +G CSCG++W
Sbjct: 601 HEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 230/482 (47%), Gaps = 53/482 (10%)

Query: 130 RYDDVAPVVY--NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
           RY D   VV   ++  +L++C   G +   K  HG+ +      D+     ++N Y+KCG
Sbjct: 53  RYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCG 112

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            +E A ++FD M ER LVSWNT++  + +N     ALD+   M  EG +    TI S+L 
Sbjct: 113 FVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLS 172

Query: 248 AV-ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
           A  AN  +L   K +H  +M+   D  + V TAL+D+YAKCG +  A  VF+ M+ ++ V
Sbjct: 173 ACGANCDALEC-KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSV 231

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +W+SM+A YV+  N EEA+ ++++     +E    T+   + AC++L  L  G  +H ++
Sbjct: 232 TWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 291

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +   G++V + +S + MY+KC  +  +  IFS++Q K +  WN +I G+A++ R  E +
Sbjct: 292 RKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVM 351

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F KM+   + P+  T                                    ++L+ + 
Sbjct: 352 ILFEKMQQDGMHPNEVT-----------------------------------FSSLLSVC 376

Query: 487 AKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
              G V   R  F +M   +     V  ++ M+D  G  GL   A EL   +   PT   
Sbjct: 377 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASI 436

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
             + L +   C +  L E       + KK + +EP  ++ G  V LL      N+ W+ I
Sbjct: 437 WGSLLASCRVCKNLELAE------VAAKKLFELEP--ENAGNHV-LLSNIYAANKQWEEI 487

Query: 602 QK 603
            K
Sbjct: 488 AK 489



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 155/289 (53%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + K   +  A +VF+ + ++    ++TM+  Y +     +A+     MR +     
Sbjct: 104 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFS 163

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  CG   +    K++H   +     L+L+  T ++++YAKCG I +A ++F+
Sbjct: 164 EFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFE 223

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ++  V+W+++VAG+ Q+   E AL L  R        +  T+ S++ A +N+ +L  
Sbjct: 224 SMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 283

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H    ++GF S V V+++ VDMYAKCG +  + ++F  ++ +N+  WN++I+ + +
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
              P+E M +F+KM   G+ P  VT    L  C   G +E G    KL+
Sbjct: 344 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 392



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 152/295 (51%), Gaps = 9/295 (3%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           C +L E +++  L +K+ L D +L+  T L+ L+ K   ++DA +VFE + DK    + +
Sbjct: 178 CDAL-ECKKLHCLSMKTSL-DLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSS 235

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ GY +  + ++A+    R +   +    +  + ++  C ++  +  GK++H  +  +G
Sbjct: 236 MVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSG 295

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           F  ++F  +  V+MYAKCG + E+Y +F  + E+++  WNTI++GFA++   +  + L  
Sbjct: 296 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFE 355

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAK 286
           +M ++G   + +T  S+L    + G +  G+      MR  +    NV   + +VD+  +
Sbjct: 356 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGR 414

Query: 287 CGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            G +  A  +   +      S W S++A+     N E A    +K+ +  +EP N
Sbjct: 415 AGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFE--LEPEN 467


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/698 (36%), Positives = 403/698 (57%), Gaps = 12/698 (1%)

Query: 37  RIYRHPSALL---------LEVCTSLKE--LRRILPLIIKSGLCDQHLF-QTKLVSLFCK 84
           +++ HPSA L         ++ C +L    L R++    ++   D  +F  + L+ ++  
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
              L DA +VF+ + ++   L++ M+ GY K  S+  AV     MR     P        
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L V     ++  G ++H   +  G   ++     +V+MYAKC  +++ +K+F  MP  DL
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           V+WN +++G  QNGF + AL L   M + G R D +T+VS+LPA+ ++     GK +HGY
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +R      V + +ALVD+Y KC  V  A+ V+D  K+ +VV  ++MI+ YV  G  +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +++F+ +L+QG+ P  V I   L ACA +  ++ G  +H    +        + ++L+ M
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC ++D +  IFSK+  K  V+WN+MI  +AQNG   EALN F +M  + +K  + T+
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            SV+ A A L  I Y K IH +VI+     ++F  +ALIDMY KCG +  A  +F+ M E
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           ++  +WN +I  YG +GL K +V L   M E   K + +TFL  +SAC+H+G V+EG+  
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  + ++Y I P M+H+  MVDL  RAG+L++A + I  MP +P   ++GA+L AC++H+
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           NVEL E A+  LF+LDP   GY+VL++NI A A  WD ++KVR +M+   +QK PG S V
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           ++ N  H F +    HP S+ IY  L++++ E++  G+
Sbjct: 794 DVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 8/284 (2%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           ++  L  C     L  G+ VH       L  TD ++   L+ MY   ++   A  +FS L
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 402 ---QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK--PDSFTMVSVIPALAELSV 456
                   + WN +I G    G    AL ++ KM +      PDS T   V+ + A L  
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           I   + +H        + ++FV +ALI MYA  G +  AR +FD M ER    WNVM+DG
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y   G   +AVELF  M     +PN  T  C +S  +    +  G+   T L   YG+E 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT-LAVKYGLES 280

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            +     +V +  +   L++ W     MP +  +T +  M+  C
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVT-WNGMISGC 323


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/666 (37%), Positives = 392/666 (58%), Gaps = 13/666 (1%)

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           G++ +GK +H +LI      D+     +++ YAKCG++  A  +FD MP R+ VS N ++
Sbjct: 25  GDLSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDF----ITIVSILPAVANVGSLRIGKAVHGYAMR 267
           +G+A +G  + +L L+       R  DF      + + + A ANV S  +G+  HGYA++
Sbjct: 84  SGYASSGRHKESLQLL-------RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVK 136

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           AGF     V  A++ MY +C  +E A  VF+ +   +  ++NSMI  Y++ G  + ++ I
Sbjct: 137 AGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGI 196

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
            + M  +  +   V+ +  L  CA + D   G  VH    + +L  +V + ++L+ MY K
Sbjct: 197 VRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGK 256

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  V  A   F  L  K +VSW A++  Y QN    +AL  F  M  + ++P+ FT    
Sbjct: 257 CDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVA 316

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + + A L+ +R    + A V+++    ++ V  AL++MY+K G++  A  +F  M  R V
Sbjct: 317 LNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDV 376

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN++I GY  HGL +  +E F+ ML     P+ +TF+  +SAC+  GLV+E  +Y  +
Sbjct: 377 VSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNT 436

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + K+ GI P  +HY  MV LL R GRL+EA  FI    I   +  + ++L +C+++KN  
Sbjct: 437 MMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYG 496

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG + A ++ +L+P + G +VLL+N+YA A+ WD + KVR  M ++ ++K+PG S + + 
Sbjct: 497 LGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVG 556

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
           ++VH F S    HPQ  +I   LE LID+IKA GYVP+   + HD++D  +E  L  HSE
Sbjct: 557 SDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSE 616

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           KLA+AFGL+++  G+TIHI KNLR+C DCH A K IS+VT R+I+VRD  RFHC + G+C
Sbjct: 617 KLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGIC 676

Query: 807 SCGDYW 812
           SC DYW
Sbjct: 677 SCNDYW 682



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 230/476 (48%), Gaps = 13/476 (2%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +    L+S + K   +  A  VF+ +P +     + ++ GYA      +++  L   R  
Sbjct: 46  VLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLL---RVV 102

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D     Y  +  +    +V     G++ HG  +  GF+   +    V+ MY +C  +E+A
Sbjct: 103 DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDA 162

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            K+F+ +   D  ++N+++ G+   G  + +L +V  M  E  + D+++ V++L   A++
Sbjct: 163 SKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASM 222

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
               +G  VH  A++   +  V V +ALVDMY KC  V  A   F+ +  +NVVSW +++
Sbjct: 223 KDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVM 282

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            AY +    E+A+++F  M  +GV+P   T   AL++CA L  L  G  +   + +    
Sbjct: 283 TAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHW 342

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
             + ++N+L++MYSK   ++ A  +F  +  + +VSWN +I GYA +G   E +  F  M
Sbjct: 343 DHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSM 402

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
            S  + P   T V V+ A A+L ++  A  +++ ++            T ++ +  + G 
Sbjct: 403 LSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGR 462

Query: 492 VGTA-RALFDMMNERHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDI 543
           +  A R + +      V  W  +++    Y  +GLG    E   ++     +P+D+
Sbjct: 463 LDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQL-----EPSDV 513



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 177/352 (50%), Gaps = 2/352 (0%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K+G  +Q      ++ ++C+   + DA++VFE +       +++M+ GY     LD ++
Sbjct: 135 VKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSL 194

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
             +  M  +       +Y  +L  C  + +   G ++H Q +     L+++  + +V+MY
Sbjct: 195 GIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMY 254

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            KC  + +A + F+ +PE+++VSW  ++  + QN   E AL L   M  EG + +  T  
Sbjct: 255 GKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYA 314

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
             L + A + +LR G A+    M+ G    + VS AL++MY+K G +E A  VF  M  R
Sbjct: 315 VALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR 374

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FV 362
           +VVSWN +I  Y   G   E M  F  ML   V P+ VT +  L ACA LG ++    ++
Sbjct: 375 DVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYL 434

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD-IFSKLQGKTLVSWNAMI 413
           + ++ ++ +         ++ +  +  ++D A   I +   G  +V+W +++
Sbjct: 435 NTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLL 486



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 5/173 (2%)

Query: 44  ALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A+ L  C  L  LR    L   ++K+G  D  L    L++++ K  S+ DA RVF  +P 
Sbjct: 314 AVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL 373

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++ ++ GYA      + +     M    V P    +  +L  C  +G +      
Sbjct: 374 RDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYY 433

Query: 161 HGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYK-MFDRMPERDLVSWNTIV 211
              ++   G +      T +V +  + G+++EA + + +     D+V+W +++
Sbjct: 434 LNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLL 486


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/687 (35%), Positives = 393/687 (57%), Gaps = 18/687 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL+ C D       + +HG ++  G   + F M+ +VN+YAKCG +E+A ++FD M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R++V+W T++ GF QN   + A+ +   M   G      T+ ++L A +++ SL++G  
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
            H Y ++   D   +V +AL  +Y+KCGR+E A   F  ++ +NV+SW S ++A  + G 
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           P + +R+F +M+   ++P   T+  AL  C ++  LE G  V+ L  +    +++ + NS
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN-----------GRVNEALNYF 429
           L+ +Y K   +  A  +F+++   ++V+WNAMI G+AQ             R +EAL  F
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            K+    +KPD FT+ SV+   + +  I   + IHA  I++ F  +V V T+LI MY+KC
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC 429

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++  A   F  M+ R +  W  MI G+  HG+ + A+ +F  M     +PN +TF+  +
Sbjct: 430 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVL 489

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           SACSH+G+V + ++YF  ++K Y I+P MDHY  MVD+  R GRL +A +FI+KM  EP 
Sbjct: 490 SACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 549

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             ++   +  CK H N+ELG  AA +L  L P +   +VLL N+Y +A  ++ +++VR +
Sbjct: 550 EFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKM 609

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY-----VP 724
           ME++ + K    S + +K++V+SF +    HPQS  I   LE L+ ++K  GY     V 
Sbjct: 610 MEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVE 669

Query: 725 DTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
            ++   + E     N+   HSEKLAI FGL N    S I + K+  +C D HN  KY+S 
Sbjct: 670 ISDEEEEEEKTSSPNIY--HSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVST 727

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDY 811
           + GREIIV+D  R H F NG CSCG++
Sbjct: 728 LAGREIIVKDSKRLHKFANGECSCGNF 754



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 249/502 (49%), Gaps = 19/502 (3%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C    S  E + +   ++K+G  D     + LV+++ K  ++ DA RVF+ +  + 
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + T++ G+ + +    A+     M Y    P VY  + +L  C  +  ++ G + H 
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I      D    + + ++Y+KCG++E+A K F R+ E++++SW + V+  A NG    
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L L   M     + +  T+ S L     + SL +G  V+   ++ G++S + V  +L+ 
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE-----------GGNPEEAMRIFQKM 331
           +Y K G +  A  +F+ M   ++V+WN+MIA + +                EA+++F K+
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKL 372

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              G++P   T+   L  C+ +  +E+G  +H    +    +DV ++ SLISMYSKC  +
Sbjct: 373 NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSI 432

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +RA+  F ++  +T+++W +MI G++Q+G   +AL+ F  M    ++P++ T V V+ A 
Sbjct: 433 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSAC 492

Query: 452 AELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTT 509
           +   ++  A  +   +  +   +  +     ++DM+ + G +  A      MN E     
Sbjct: 493 SHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI 552

Query: 510 WNVMIDGYGTHG---LGKAAVE 528
           W+  I G  +HG   LG  A E
Sbjct: 553 WSNFIAGCKSHGNLELGFYAAE 574


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 380/657 (57%), Gaps = 44/657 (6%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAK--CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           ++HG ++ +G   D +    ++  YA       + A K+F  +P  ++  WN ++ G  +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N     A+    RM  + R   F T  ++  A +   +++ G+ +HG+ ++ G  S V++
Sbjct: 111 NNKLFKAIYFYGRMVIDARPNKF-TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +A + MYA  GR+E AR +F   +S +VV WN+MI  Y++ G  E A  +F +M  + +
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
              NV I   L    +LGD                                      A  
Sbjct: 229 GSWNVMI-NGLAKGGNLGD--------------------------------------ARK 249

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++  +  +SW++M+ GY   GR  EAL  F +M+ +  +P  F + SV+ A + +  
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           I   +W+HA + R+  + +  + TAL+DMYAKCG +     +F+ M ER + TWN MI G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
              HG  + A+ELF+K+ EG  KPN IT +  ++AC+H+G V++G+  F ++++ YG++P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYG MVDLLGR+G  +EA D I  MP++P   V+GA+LGAC+IH N +L E+    L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EL+P   G +VLL+NIYA    +D ++K+R +M+ +G++  PG S+V+L   VH F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQ K IY  L+ + + ++ AG+ PDT+ +  D+++  +E  ++ HSEKLAIAFGL+
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           N+ PG  IHI KNLRVC DCH+ATK IS +  REIIVRD  R+H FKNG CSC D+W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 198/429 (46%), Gaps = 68/429 (15%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK--YNSLSDAARVFEPIPDKLDALYHT 108
           TSL+ L ++  L+++SG    H     L+  +    +++   A +VF  IP+    +++ 
Sbjct: 44  TSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNI 103

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++KG  +   L  A+ F  RM  D   P  + Y  L K C     ++ G++IHG ++ +G
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKM------------------------------FDR 198
              D+   +  ++MYA  G++E+A KM                              F +
Sbjct: 163 IGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222

Query: 199 MPERDLVSWNTIVAGFAQNG--------FAEL-----------------------ALDLV 227
           MP +++ SWN ++ G A+ G        F E+                       AL++ 
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            +M  E  R     + S+L A +N+G++  G+ VH Y  R        + TAL+DMYAKC
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           GR++    VF+ MK R + +WN+MI      G  E+A+ +F K+ +  ++P  +T++  L
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGKT 405
            ACA  G +++G+ + + + +   G D  + +   ++ +  +      A D+ + +  K 
Sbjct: 403 TACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461

Query: 406 LVS-WNAMI 413
             + W A++
Sbjct: 462 NAAVWGALL 470



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 143/268 (53%), Gaps = 10/268 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++   K  +L DA ++F+ + ++ +  + +M+ GY       +A+    +M+ ++  P 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  C ++G I +G+ +H  L  N   LD    T +++MYAKCG+++  +++F+
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG---- 253
            M ER++ +WN ++ G A +G AE AL+L +++ E   + + IT+V +L A A+ G    
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMI 312
            LRI + +  +    G D  +     +VD+  + G    A  + + M  + N   W +++
Sbjct: 414 GLRIFQTMREF---YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL 470

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            A    GN + A R+ + +L+  +EP N
Sbjct: 471 GACRIHGNFDLAERVGKILLE--LEPQN 496



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 6/167 (3%)

Query: 435 KNIKPDSFTMVSVIPALAELSV--IRYAKWIHALVIRSCFEKNVFVMTALIDMYAK--CG 490
           KNI        +V+      S+  ++Y   +H LV+RS   ++ +V  AL+  YA     
Sbjct: 22  KNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFS 81

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
               A  +F  +   +V  WN++I G   +     A+  + +M+    +PN  T+     
Sbjct: 82  NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFK 140

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           ACS +  V+EG      + K +GI   +    A + +    GRL +A
Sbjct: 141 ACSVAQAVQEGRQIHGHVVK-HGIGSDVHIKSAGIHMYASFGRLEDA 186


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/691 (37%), Positives = 397/691 (57%), Gaps = 5/691 (0%)

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYA 184
           L R    D A  V+    LL+ CG  G++RRG+ +H +L+++G +    F    ++ MY+
Sbjct: 9   LWRPPAPDAATTVH-LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS 67

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
            C  +  A ++F  MP R+ VSW T+V+G +QN     AL     M   G       + S
Sbjct: 68  HCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSS 127

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
              A A +G+   G  +H   +R GFD+ + V++ L DMY+KCG +  A  VFD M  ++
Sbjct: 128 AARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKD 187

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM-EALHACADLGDLERGIFVH 363
            V+W +MI  Y + G+ E A+  F+ M  +G+   +  +    L A   L D      +H
Sbjct: 188 AVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIH 247

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS-KLQGKTLVSWNAMILGYAQNGRV 422
             + +     +V++ N+LI MY+K   V+ A+ +      G  +VS  +MI GY +   V
Sbjct: 248 CCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCV 307

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
            EAL  + ++R + ++P+ FT  S+I   A  +++     +HA VI++   ++ FV + L
Sbjct: 308 EEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTL 367

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           +DMY KCG +  +  LF+ +  R    WN +I+ +  HG G+ A++ F++M+    +PN 
Sbjct: 368 VDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNH 427

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           I F+  ++ACSH+GLV+EG+ YF S+K+ +GIEP  +HY  ++D  GRAGRL+EA+ FI 
Sbjct: 428 IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFIS 487

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           +MPI+P    + ++LGAC++  + ELGE AA  L +L+P   G HV L+ IYA+   W+ 
Sbjct: 488 EMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWED 547

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  VR +M    ++K PG S V+   + H F S    HPQ K IY  LE L   IK  GY
Sbjct: 548 VKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGY 607

Query: 723 VPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           +PDT+ +  ++ED  +E +L  HSE++A+AF L++      I ++KNLR+C DCH A K+
Sbjct: 608 IPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKF 667

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I  V  R+IIVRD  RFH F NG CSCGDYW
Sbjct: 668 ICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 258/526 (49%), Gaps = 20/526 (3%)

Query: 33  YIPSRIYRHPS---------ALLLEVCTSLKELRR----ILPLIIKSGLCDQHLFQTKLV 79
           Y   R++R P+         A LL+ C    +LRR       L++             L+
Sbjct: 4   YWGQRLWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 63

Query: 80  SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
           +++     L+ A R+F  +P +    + T++ G ++     DA++    MR   VAP  +
Sbjct: 64  TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRF 123

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
             +   +    +G    G ++H   +  GF  +LF  + + +MY+KCG + EA ++FD+M
Sbjct: 124 ALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQM 183

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIG 258
           P++D V+W  ++ G+A+NG  E A+     M  EG  G D     S+L A   +    + 
Sbjct: 184 PQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS 243

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVE 317
           K++H    +AGF+  V V  AL+DMYAK   VE+A R++       NVVS  SMI  Y+E
Sbjct: 244 KSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIE 303

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               EEA+ I+ ++  QGVEP   T    +  CA    LE+G  +H  + +  L  D  +
Sbjct: 304 TDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFV 363

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            ++L+ MY KC  +  +  +F++++ +T ++WNA+I  +AQ+G   EA+  F +M    I
Sbjct: 364 GSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGI 423

Query: 438 KPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA- 495
           +P+    VS++ A +   ++    K+ +++      E      + +ID Y + G +  A 
Sbjct: 424 RPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAY 483

Query: 496 RALFDMMNERHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPT 538
           + + +M  + +   W  ++      G+  LG+ A +   K+  G T
Sbjct: 484 KFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNT 529


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/724 (34%), Positives = 399/724 (55%), Gaps = 10/724 (1%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +P +    +++++ GY +     + ++     R  D+    + ++  L VCG   ++R G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + IH  + V+G    +     +++MY KCG+I+ A  +F+   E D VSWN+++AG+ + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVAN--VGSLRIGKAVHGYAMRAGFDSIVN 275
           G  +  L L+ +M   G   +   + S L A  +    S+  GK +HG A++ G D  V 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-----PEEAMRIFQK 330
           V TAL+D YAK G +E A  +F  M   NVV +N+MIA +++          EAM +F +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M  +G++P+  T    L AC+ +   E G  +H  + +  L +D  + N+L+ +YS    
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++     F       +VSW ++I+G+ QNG+    L  F ++     KPD FT+  ++ A
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A L+ ++  + IHA  I++       +  + I MYAKCG + +A   F       + +W
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           +VMI     HG  K AV+LF  M      PN ITFL  + ACSH GLVEEG+ YF  +KK
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+GI P + H   +VDLLGRAGRL EA  FI     E    ++ ++L AC++HK  + G+
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
           + A R+ EL+P+    +VLL NIY  A +     ++R +M+ +G++K PG S +E+ N V
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVED--YVQENLLSSHSEKL 748
           HSF +G   HP S+ IY  LE +++EIK   Y+ D   + D  +  +   +++S HSEKL
Sbjct: 601 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKL 659

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           A+ FG+++    + + + KNLR C  CH   K  S +  REII+RD  RFH F++G CSC
Sbjct: 660 AVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSC 719

Query: 809 GDYW 812
           GDYW
Sbjct: 720 GDYW 723



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 242/524 (46%), Gaps = 14/524 (2%)

Query: 10  SVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKS 66
           S+ +  T     HE  +   +      R+ +   +  L VC    +LR    I  LI  S
Sbjct: 11  SLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVS 70

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSF 125
           GL    L    L+ ++CK   +  A  VFE   D+LD++ +++++ GY +  S D+ +  
Sbjct: 71  GLGGPVLLTNSLIDMYCKCGRIDWARLVFES-ADELDSVSWNSLIAGYVRIGSNDEMLRL 129

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGD--VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           L++M    +    Y     LK CG      I  GK +HG  +  G  LD+   T +++ Y
Sbjct: 130 LVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTY 189

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ-----NGFAELALDLVTRMHEEGRRGD 238
           AK G +E+A K+F  MP+ ++V +N ++AGF Q     + FA  A+ L   M   G +  
Sbjct: 190 AKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPS 249

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T  SIL A + + +   GK +H    +    S   +  ALV++Y+  G +E     F 
Sbjct: 250 EFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFH 309

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
                +VVSW S+I  +V+ G  E  + +F ++L  G +P   TI   L ACA+L  ++ 
Sbjct: 310 STPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKS 369

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H    +  +G    + NS I MY+KC  +D A   F + +   +VSW+ MI   AQ
Sbjct: 370 GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQ 429

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVF 477
           +G   EA++ F  M+   I P+  T + V+ A +   ++    ++   +        NV 
Sbjct: 430 HGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVK 489

Query: 478 VMTALIDMYAKCGAVGTARA-LFDMMNERHVTTWNVMIDGYGTH 520
               ++D+  + G +  A + + D   E     W  ++     H
Sbjct: 490 HSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 533



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 9/299 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C++++     ++I   I K  L         LV L+    S+ D  + F   P KL
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KL 314

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + + +++ G+ +    +  ++    + +    P  +  + +L  C ++  ++ G++IH
Sbjct: 315 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIH 374

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              I  G           + MYAKCG I+ A   F      D+VSW+ +++  AQ+G A+
Sbjct: 375 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 434

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTAL 280
            A+DL   M   G   + IT + +L A ++ G +  G +         G    V  S  +
Sbjct: 435 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 494

Query: 281 VDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           VD+  + GR+ E    + D     + V W S+++A       +   R+ +++++  +EP
Sbjct: 495 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIE--LEP 551


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/578 (41%), Positives = 356/578 (61%), Gaps = 2/578 (0%)

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           R D  T    L A A +G LR G++V   A  AG+   V V ++L+ +YA+ G +  A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF  M  R+ V+W++M+A +V  G P +A++++++M + GV+   V ++  + AC    +
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +  G  VH  L +  +  DV    SL+ MY+K   +D A  +F  +  +  VSW+AMI G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +AQNG+ +EAL  F  M++  I+PDS  +VS + A + +  ++  + +H  ++R  F+ N
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             + TA IDMY+KCG++ +A+ LF+M+++R +  WN MI   G HG G+ A+ LF +M E
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +P+  TF   +SA SHSGLVEEG  +F  +   + I P   HY  +VDLL R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           EA D +  M  EP + ++ A+L  C  +K +ELGE  A+ + EL PD+ G   L++N+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
           A   WDK+ +VR +M+  G +K PGCS +E++   H F      HPQ + I + +  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 716 EIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGD 774
           E++  GY+P T  + HD+E+ V+E  LS HSE+LAIAFGLLN+ PG+ + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH+A KYIS +  REI+VRD  RFH FK+GVCSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 235/447 (52%), Gaps = 19/447 (4%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +T  L  C  +G++R G+ +  +    G+  D+F  + ++++YA+ G + +A K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F RMP RD V+W+T+VAGF   G    A+ +  RM E+G +GD + ++ ++ A     ++
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R+G +VHG+ +R G    V  +T+LVDMYAK G ++ A  VF  M  RN VSW++MI+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            + G  +EA+R+F+ M   G++P +  ++ AL AC+++G L+ G  VH  + + +   + 
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNC 344

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            +  + I MYSKC  +  A  +F+ +  + L+ WNAMI     +GR  +AL  F +M   
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTA-------LIDMYA 487
            ++PD  T  S++ AL+   ++   K W   +V       N F +T        L+D+ A
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMV-------NHFKITPAEKHYVCLVDLLA 457

Query: 488 KCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           + G V  A  L   M  E  V  W  ++ G   +   +    + + +LE   +P+D+  L
Sbjct: 458 RSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVL 515

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYG 573
             +S    +    + +     L KD G
Sbjct: 516 ALVSNLYAATKKWDKVRQVRKLMKDSG 542


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 399/683 (58%), Gaps = 7/683 (1%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D     +N++ LL+ C D   I   K I   ++ +GF  ++ + + +V+   KCG I+ A
Sbjct: 60  DTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYA 118

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            ++FD M ER +V+WN+++A   ++  ++ A+++   M       D  T+ S+  A +++
Sbjct: 119 RQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDL 178

Query: 253 GSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
              +  +  HG A+  G + S V V +ALVDMY K G+   A+LV D ++ ++VV   ++
Sbjct: 179 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 238

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y + G   EA++ FQ ML + V+P   T    L +C +L D+  G  +H L+ +   
Sbjct: 239 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 298

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
            + ++   SL++MY +C  VD +  +F  ++    VSW ++I G  QNGR   AL  F K
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M   +IKP+SFT+ S +   + L++    + IH +V +  F+++ +  + LID+Y KCG 
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              AR +FD ++E  V + N MI  Y  +G G+ A++LF +M+    +PND+T L  + A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           C++S LVEEG   F S +KD  I    DHY  MVDLLGRAGRL EA + +    I P + 
Sbjct: 479 CNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLV 536

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           ++  +L ACK+H+ VE+ E+   ++ E++P + G  +L++N+YA+   W+++ ++++ M+
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMK 596

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
              L+K P  S VE+  E H+F +G    HP S++I   LE LI + K  GYV D + + 
Sbjct: 597 DMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            D+E+  +E  L  HSEKLAIAF +  +  GS I I KNLRVC DCH+  K +S V  RE
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKRE 715

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II RD  RFH F++G CSCGDYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 245/511 (47%), Gaps = 17/511 (3%)

Query: 41  HPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H  + LL  C    S+  ++ I   ++KSG     +  +KLV    K   +  A +VF+ 
Sbjct: 66  HNFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDG 124

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           + ++    +++++    K     +AV     M  ++V P  Y  + + K   D+   +  
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184

Query: 158 KEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           +  HG  ++ G  + ++F  + +V+MY K G+  EA  + DR+ E+D+V    ++ G++Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G    A+     M  E  + +  T  S+L +  N+  +  GK +HG  +++GF+S +  
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            T+L+ MY +C  V+ +  VF  ++  N VSW S+I+  V+ G  E A+  F+KM+   +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           +P + T+  AL  C++L   E G  +H ++ +     D    + LI +Y KC   D A  
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  L    ++S N MI  YAQNG   EAL+ F +M +  ++P+  T++SV+ A     +
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484

Query: 457 IRYAKWIHALVIRSCFEKNVFVMT-----ALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           +          +   F K+  ++T      ++D+  + G +  A  L   +    +  W 
Sbjct: 485 VE-----EGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
            ++     H   + A  +  K+LE   +P D
Sbjct: 540 TLLSACKVHRKVEMAERITRKILE--IEPGD 568



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 14/386 (3%)

Query: 33  YIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDA 91
           Y  S +++  S L LE     KE +R   L +  GL   ++F  + LV ++ K+    +A
Sbjct: 166 YTLSSVFKAFSDLSLE-----KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA 220

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
             V + + +K   L   ++ GY++     +AV     M  + V P  Y Y  +L  CG++
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNL 280

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            +I  GK IHG ++ +GF   L + T ++ MY +C  ++++ ++F  +   + VSW +++
Sbjct: 281 KDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLI 340

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +G  QNG  E+AL    +M  +  + +  T+ S L   +N+     G+ +HG   + GFD
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
                 + L+D+Y KCG  + ARLVFD +   +V+S N+MI +Y + G   EA+ +F++M
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS----LISMYSK 387
           ++ G++P +VT++  L AC +   +E G    +L D  +    + +TN     ++ +  +
Sbjct: 461 INLGLQPNDVTVLSVLLACNNSRLVEEGC---ELFDSFR-KDKIMLTNDHYACMVDLLGR 516

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMI 413
             +++ A  + +++    LV W  ++
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLL 542


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/655 (37%), Positives = 379/655 (57%), Gaps = 34/655 (5%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ + E + + WNT++ G A +     +L L   M   G   +  T   +L + A 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD------------- 298
             +   G+ +HG  ++ GFD  + V T+L+ MY +  R+E A  VFD             
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 299 --GMKSR----------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
             G  SR                +VVSWN+MI+ Y E G  +EA+ +F++M+   V P  
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T +  L ACA  G +E G  VH  +D     +++ + N+LI +YSKC +V+ A  +F  
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K ++SWN +I GY       EAL  F +M      P+  TM+SV+PA A L  I   
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316

Query: 461 KWIHALVIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
           +WIH  + +          + T+LIDMYAKCG +  A  +F+ M  + +++WN MI G+ 
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG   A+ +LF++M +   +P+DITF+  +SACSHSG+++ G H F S+ +DY + P +
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKL 436

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HYG M+DLLG +G   EA + I  M +EP   ++ ++L ACK+H NVEL E  A  L +
Sbjct: 437 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK 496

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           ++P+    ++LL+NIYA+A  W+ +A++R ++  K ++K PGCS +E+ + V  F  G  
Sbjct: 497 IEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDK 556

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQ++ IY  LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIAFGL+++
Sbjct: 557 FHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 616

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            PG+ + I KNLRVC +CH ATK +S +  REI+ RD  RFH F++GVCSC DYW
Sbjct: 617 KPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 281/546 (51%), Gaps = 70/546 (12%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ L  A  VFE I +    +++TM++G+A  +    +++  + M    + P  Y + +L
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------ 198
           LK C        G++IHGQ++  GF LDL+  T +++MY +  ++E+AYK+FDR      
Sbjct: 71  LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130

Query: 199 -------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                                    +P +D+VSWN +++G+A+ G  + AL+L   M + 
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             R D  T V++L A A+ GS+ +G+ VH +    GFDS + +  AL+D+Y+KCG VETA
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F G+  ++V+SWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L ACA L
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310

Query: 354 GDLERGIFVHKLLDQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           G ++ G ++H  +D+ LK  T+  S+  SLI MY+KC  ++ A  +F+ +  K+L SWNA
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI G+A +GR + + + F +MR   I+PD  T V ++ A +   ++   + I     RS 
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI----FRSM 426

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            +   + MT  ++ Y                          MID  G  GL K A E+ N
Sbjct: 427 TQD--YKMTPKLEHYG------------------------CMIDLLGHSGLFKEAEEMIN 460

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV-MDHYGAMVDLLGR 590
            M     +P+ + +   + AC   G VE    +  +L K   IEP     Y  + ++   
Sbjct: 461 TM---EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK---IEPENPSSYILLSNIYAS 514

Query: 591 AGRLNE 596
           AGR  +
Sbjct: 515 AGRWED 520



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 209/411 (50%), Gaps = 21/411 (5%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++ +     +  A ++F+ IP K    ++ M+ GYA+     +A+     M   +V 
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    Y  +L  C   G I  G+++H  +  +GF  +L  +  ++++Y+KCG++E A  +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  +  +D++SWNT++ G+      + AL L   M   G   + +T++S+LPA A++G++
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 256 RIGKAVHGYAMR--AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            IG+ +H Y  +   G  +  ++ T+L+DMYAKCG +E A  VF+ M  +++ SWN+MI 
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLG 372
            +   G  + +  +F +M   G+EP ++T +  L AC+  G L+ G  + + + Q  K+ 
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL-VSWNAMILGYAQNGRVNEALNY--- 428
             +     +I +         A ++ + ++ +   V W +++     +G V  A ++   
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW-----IHALVIRSCFEK 474
             K+  +N  P S+ ++S I A A        +W     I AL+   C +K
Sbjct: 494 LIKIEPEN--PSSYILLSNIYASA-------GRWEDVARIRALLNGKCMKK 535



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 2/159 (1%)

Query: 67  GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
           G+ +    +T L+ ++ K   +  A +VF  +  K  + ++ M+ G+A     D +    
Sbjct: 329 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLF 388

Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAK 185
            RMR   + P    +  LL  C   G +  G+ I   +  +   +  L     ++++   
Sbjct: 389 SRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 448

Query: 186 CGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELA 223
            G  +EA +M + M  E D V W +++     +G  ELA
Sbjct: 449 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA 487


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/767 (33%), Positives = 417/767 (54%), Gaps = 7/767 (0%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTK-----LVSLFCKYNSLSDAARVFEPIPDKLDALYH 107
           LK+L R   +     L D+  ++       +VS + K  +L  A  +FE +  + +  + 
Sbjct: 53  LKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWT 112

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
            M+ GY++     +A +    M    V P    +  LL    D   ++   +IH  +I  
Sbjct: 113 IMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRF 172

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           GFS  L     +V+ Y K   ++ A ++F  MP +D VS+N ++ G+ + GF E AL L 
Sbjct: 173 GFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLF 232

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            +M     +    T  ++L        +  G+ +HG A++  +   + V+ AL+D Y+K 
Sbjct: 233 MQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKH 292

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
             ++ A+ +FD M   + VS+N +I  Y   G  E++  +F+++     +  N      L
Sbjct: 293 DYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
              A   +L  G   H         ++V + N+L+ MY+KC+K + A  IF+ L  +  V
Sbjct: 353 SVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSV 412

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            W A+I  Y Q G   EAL  F +M  +N+  D  T  S + A A L+ +   K +H+ V
Sbjct: 413 PWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSV 472

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           IR     +VF  + L+DMYA CG++  A  +F  M +R++  WN +I  Y  +G  +A  
Sbjct: 473 IRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATF 532

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
             F  M+E    P+ ++FL  ++ACSH GLVE+ + YF S+ + Y ++P   HY  M+D+
Sbjct: 533 SSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDV 592

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP-DEGGY 646
           L R+GR NEA + I +MP EP   ++ ++L +C+IHKN +L +KAA++LF++D   +   
Sbjct: 593 LCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAA 652

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +V ++NIYA A  W+  AKV+  M ++G++K    S VE+ + VH F +    HPQ+++I
Sbjct: 653 YVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQI 712

Query: 707 YTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
              + +L++ +   GY PDT+ ++ +V++ ++   L  HSE+LAIAF L+N+  GS I I
Sbjct: 713 RRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIII 772

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLR C DCH A K IS + GREI VRD  RFH F++G CSCGDYW
Sbjct: 773 MKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 238/488 (48%), Gaps = 5/488 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           T+LKE+ +I   II+ G     +    LV  +CK   L  A+++F  +P K    ++ M+
Sbjct: 157 TTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMI 216

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY K+   ++A+   ++MR  D  P  + +  +L +     ++  G++IHG  I   + 
Sbjct: 217 TGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYV 276

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+F    +++ Y+K   I+ A  +FD MPE D VS+N I+ G+A NG  E + DL  R+
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
                        ++L   A   +L +G+  H  A+     S V V  ALVDMYAKC + 
Sbjct: 337 QGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKF 396

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E A  +F  +  RN V W ++I+ YV+ G  EEA+++F++M  + V     T    L A 
Sbjct: 397 EDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKAS 456

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A+L  +  G  +H  + +L L + V   + L+ MY+ C  +  A ++F ++  + +V WN
Sbjct: 457 ANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWN 516

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW-IHALVIR 469
           A+I  Y+QNG      + F  M    + PDS + +SV+ A +   ++  A W  +++   
Sbjct: 517 ALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQV 576

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH---GLGKA 525
              +        +ID+  + G    A  L  +M  E     W+ +++    H    L K 
Sbjct: 577 YKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKK 636

Query: 526 AVELFNKM 533
           A +   KM
Sbjct: 637 AADQLFKM 644



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 25/311 (8%)

Query: 320 NPEEAMRIFQKMLDQGVE------PTNVTIM------EALHACADLGDLERGIFVHK--- 364
           NP   +RIF K    G        P +  I+      E       L DL R   + K   
Sbjct: 8   NPWGVIRIFSKRFYCGFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQ 67

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L D++    + S  N ++S Y K + + RA ++F  +  +  VSW  MI GY+QN +  E
Sbjct: 68  LFDEMPY-RNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKE 126

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A N + +M    +KPD  T  +++    + + ++    IH+ +IR  F  ++ V  +L+D
Sbjct: 127 AFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVD 186

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
            Y K   +  A  LF  M  +   ++NVMI GY  +G  + A++LF +M     +P+  T
Sbjct: 187 SYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFT 246

Query: 545 F--LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDF 600
           F  +  +S  S   +  + IH   ++K  Y    V D +   A++D   +   ++ A + 
Sbjct: 247 FAAMLGMSVGSEDVIFGQQIHGL-AIKTSY----VWDIFVANALLDFYSKHDYIDLAKNL 301

Query: 601 IQKMPIEPGIT 611
             +MP   G++
Sbjct: 302 FDEMPELDGVS 312


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/690 (35%), Positives = 404/690 (58%), Gaps = 8/690 (1%)

Query: 31  RAYIPSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNS 87
           + ++PS  Y  PS  LL+ C+SL      L L   I+ SGL       + L++ + K+  
Sbjct: 62  KTHVPSDAYTFPS--LLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGF 119

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
              A +VF+ +P++    + +++  Y++   + +A S    MR   + P   +   +L +
Sbjct: 120 ADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQP---SSVTMLSL 176

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
              V E+   + +HG  I+ GF  D+     +++MY KC  IE + K+FD M +RDLVSW
Sbjct: 177 LFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSW 236

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N++V+ +AQ G+    L L+  M  +G   D  T  S+L   A+ G L++G+ +HG  +R
Sbjct: 237 NSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILR 296

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
             FD   +V T+L+ MY K G ++ A  +F+    ++VV W +MI+  V+ G+ ++A+ +
Sbjct: 297 TCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAV 356

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F++ML  GV+ +  T+   + ACA LG    G  VH  + + +L  D++  NSL++M++K
Sbjct: 357 FRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAK 416

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +D+++ +F K+  + LVSWNAMI GYAQNG V +AL  F +MRS +  PDS T+VS+
Sbjct: 417 CGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSL 476

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +   A    +   KWIH+ VIR+     + V T+L+DMY KCG +  A+  F+ M    +
Sbjct: 477 LQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDL 536

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +W+ +I GYG HG G+ A+  ++K LE   KPN + FL  +S+CSH+GLVE+G++ + S
Sbjct: 537 VSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYES 596

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + +D+GI P ++H+  +VDLL RAGR+ EA++  +K   +P + V G +L AC+ + N E
Sbjct: 597 MTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNE 656

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG+  AN +  L P + G  V LA+ YA+ + W+++ +  T M   GL+K PG S +++ 
Sbjct: 657 LGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIH 716

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             + +F++    HPQ + I   L+ L  E+
Sbjct: 717 GTITTFFTDHNSHPQFQEIVCTLKFLRKEM 746



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 182/351 (51%), Gaps = 3/351 (0%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           S+N I+   +  G     L     M +     D  T  S+L A +++    +G ++H   
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           + +G      ++++L++ YAK G  + AR VFD M  RNVV W S+I  Y   G   EA 
Sbjct: 96  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F +M  QG++P++VT++  L   ++L  ++    +H         +D++++NS++SMY
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQ---CLHGSAILYGFMSDINLSNSMLSMY 212

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
            KC+ ++ +  +F  +  + LVSWN+++  YAQ G + E L     MR +  +PD  T  
Sbjct: 213 GKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFG 272

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           SV+   A    ++  + +H  ++R+CF+ +  V T+LI MY K G +  A  +F+   ++
Sbjct: 273 SVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDK 332

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            V  W  MI G   +G    A+ +F +ML+   K +  T    I+AC+  G
Sbjct: 333 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLG 383



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 129/260 (49%), Gaps = 3/260 (1%)

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           S  + S+N++I  +   G   + +  +  ML   V     T    L AC+ L     G+ 
Sbjct: 31  SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS 90

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H+ +    L  D  + +SLI+ Y+K    D A  +F  +  + +V W ++I  Y++ GR
Sbjct: 91  LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGR 150

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           V EA + F +MR + I+P S TM+S++  ++EL+   + + +H   I   F  ++ +  +
Sbjct: 151 VPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELA---HVQCLHGSAILYGFMSDINLSNS 207

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           ++ MY KC  +  +R LFD M++R + +WN ++  Y   G     + L   M     +P+
Sbjct: 208 MLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPD 267

Query: 542 DITFLCAISACSHSGLVEEG 561
             TF   +S  +  G ++ G
Sbjct: 268 PQTFGSVLSVAASRGELKLG 287


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/641 (37%), Positives = 387/641 (60%), Gaps = 23/641 (3%)

Query: 195 MFDRMPERDLVSWNTIVA------GFAQN-GFAELALDLVTRMHEE----------GRRG 237
           +F++   R  V WN+IV+        + N  FA    DL+ +  +               
Sbjct: 54  VFNQQLTRLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREAS 113

Query: 238 DFITIVSILP----AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            FI + SI+     A+++  S+    A+H   +++   S   +   LV MY K G  E A
Sbjct: 114 QFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDA 173

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACAD 352
           + +FD M ++++VSWNS+++     G     +  F +M  + G +P  VT++  + ACAD
Sbjct: 174 QRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAD 233

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           +G L+ G  +H ++ +L +     + NSLI+MY K   +D A+ +F ++  ++LVSWN+M
Sbjct: 234 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSM 293

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           ++ +  NG   + ++ F  M+   I PD  TMV+++ A  +  + R A+ IHA + R  F
Sbjct: 294 VVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGF 353

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             ++ + TAL+++YAK G +  +  +F+ + +R    W  M+ GY  H  G+ A++LF+ 
Sbjct: 354 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDL 413

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M++   + + +TF   +SACSHSGLVEEG  YF  + + Y +EP +DHY  MVDLLGR+G
Sbjct: 414 MVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSG 473

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
           RL +A++ I+ MP+EP   V+GA+LGAC+++ NVELG++ A +L  LDP +   +++L+N
Sbjct: 474 RLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSN 533

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           IY+AA +W   +KVR +M+++ L + PGCS +E  N++H F  G   HP+S  I+T LE 
Sbjct: 534 IYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEE 593

Query: 713 LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           LI +I+ AG  P T  + HD+++ V+ ++++ HSEKLAIAFGLL +  G  + I KNLR+
Sbjct: 594 LIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRI 653

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCH+  K+ SL+  R II+RD  RFH F +G+CSC DYW
Sbjct: 654 CGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 1/311 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           CTS+     I   +IKS          +LVS++ K     DA R+F+ +P+K    ++++
Sbjct: 132 CTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSL 191

Query: 110 LKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           + G +    L   ++   RMR +    P       ++  C D+G +  GK +HG ++  G
Sbjct: 192 MSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLG 251

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
            S     +  ++NMY K G ++ A ++F+ MP R LVSWN++V     NG+AE  +DL  
Sbjct: 252 MSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 311

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M   G   D  T+V++L A  + G  R  +++H Y  R GF++ + ++TAL+++YAK G
Sbjct: 312 LMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLG 371

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           R+  +  +F+ +K R+ ++W +M+A Y       EA+++F  M+ +GVE  +VT    L 
Sbjct: 372 RLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLS 431

Query: 349 ACADLGDLERG 359
           AC+  G +E G
Sbjct: 432 ACSHSGLVEEG 442



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 176/392 (44%), Gaps = 38/392 (9%)

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           +VF+   +R  V WNS+++  V  G      R F       + P           C    
Sbjct: 53  IVFNQQLTRLAVPWNSIVSP-VRCGTSISHNRSF-AFRHTDLIPKQFKRFNTNKGCCIFR 110

Query: 355 DLERGIFVHKLLDQLKLG-----------------------TDVSMTNSLISMYSKCKKV 391
           +  + I V+ ++  L                          +D  + + L+SMY K    
Sbjct: 111 EASQFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYD 170

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK-PDSFTMVSVIPA 450
           + A  +F ++  K LVSWN+++ G +  G +   LN FC+MR+++ + P+  T++SV+ A
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A++  +   K +H +V++        V+ +LI+MY K G +  A  LF+ M  R + +W
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL--VEEGIHYFTSL 568
           N M+  +  +G  +  ++LFN M      P+  T +  + AC+ +GL    E IH +   
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI-- 348

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
               G    +    A+++L  + GRLN + D  +++     I  + AML    +H     
Sbjct: 349 -HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIA-WTAMLAGYAVHA---- 402

Query: 629 GEKAANRLFELDPDEGGY--HVLLANIYAAAS 658
             + A +LF+L   EG    HV   ++ +A S
Sbjct: 403 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACS 434



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 146/311 (46%), Gaps = 15/311 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E + +  +++K G+  +      L++++ K   L  A+++FE +P +    +++M+ 
Sbjct: 236 ALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVV 295

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            +      +  +     M+   + P       LL+ C D G  R+ + IH  +   GF+ 
Sbjct: 296 IHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA 355

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+   T ++N+YAK G++  +  +F+ + +RD ++W  ++AG+A +     A+ L   M 
Sbjct: 356 DIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMV 415

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHG-----YAMRAGFDSIVNVSTALVDMYAK 286
           +EG   D +T   +L A ++ G +  GK         Y +    D      + +VD+  +
Sbjct: 416 KEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY----SCMVDLLGR 471

Query: 287 CGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT---NVT 342
            GR+E A  +   M        W +++ A    GN E    + +++L   ++P+   N  
Sbjct: 472 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYI 529

Query: 343 IMEALHACADL 353
           ++  +++ A L
Sbjct: 530 MLSNIYSAAGL 540


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/552 (41%), Positives = 341/552 (61%), Gaps = 32/552 (5%)

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A+L+F  + +  V  WN+ + ++ EG +P +A+ +F ++ +  + P + T    L AC+ 
Sbjct: 66  AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN-- 410
           L D+  G  VH  +++L L +++ + N ++ +Y+ C ++  A  +F K+  + +++WN  
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185

Query: 411 -----------------------------AMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
                                        +MI GYAQ G+  EA++ F +M    + P+ 
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T+V+V+ A A++  +   + IH    RS +EKN+ V   LIDMY KCG +  A  +FD 
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M ER V +W+ MI G   HG  + A+ LFNKM+    KPN +TF+  + ACSH G+VE+G
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             YF S+ +DYGI P ++HYG MVDL  RAG L EA +FI  MPI P   V+GA+LG CK
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +HKN++L E+A   L +LDP   GY+V+L+NIYA A  W+ +A+VR +M  +G++KTPG 
Sbjct: 426 VHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGW 485

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S + ++  V++F +G   HPQ++ I+   E L+  +K  GYVP+T+ +  D+E+  +E  
Sbjct: 486 SSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKF 545

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLA+ FGL+ ++PG+ I I KNLRVC DCH A K IS+V+ REI+VRD +RFHC
Sbjct: 546 LYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHC 605

Query: 801 FKNGVCSCGDYW 812
           FKNG CSCGDYW
Sbjct: 606 FKNGSCSCGDYW 617



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 202/356 (56%), Gaps = 33/356 (9%)

Query: 36  SRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS-LSDAARV 94
           S ++  PS  LL   TS  EL+++   ++K+      L  +++ S+ C +NS  S A  +
Sbjct: 11  SPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASV-CAFNSSFSYAKLI 69

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+ +       ++T L+ +A+  S  DA+S   R+R  D++P  Y  +++LK C  + ++
Sbjct: 70  FQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDV 129

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA-- 212
           R GK +HG +   G   ++F    +V++YA CG+I  A K+FD+MP+RD+++WN ++A  
Sbjct: 130 RNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARL 189

Query: 213 -----------------------------GFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                                        G+AQ G ++ A+DL   M + G   + +T+V
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++L A A++G+L +G+ +H ++ R+G++  + V   L+DMY KCG +E A  +FD M+ R
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEER 309

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
            VVSW++MIA     G  E+A+ +F KM++ GV+P  VT +  LHAC+ +G +E+G
Sbjct: 310 TVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 209/474 (44%), Gaps = 74/474 (15%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K++H  L+     L    ++ V ++ A       A  +F  +   ++  WNT +  FA+ 
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                A+ L  R+ E     D  T   +L A + +  +R GK VHGY  + G  S + + 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWN---------------------------- 309
             +V +YA CG +  AR VFD M  R+V++WN                            
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 310 ---SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
              SMI  Y + G  +EA+ +F +M D G+ P  VT++  L ACAD+G+L  G  +H   
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
           ++     ++ + N+LI MY KC  ++ A  IF  ++ +T+VSW+AMI G A +GR  +AL
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F KM +  +KP++ T + ++ A + + ++   +   A + R       + +   I+ Y
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD------YGIVPRIEHY 385

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
                                     M+D +   GL + A E    M   P  PN + + 
Sbjct: 386 G------------------------CMVDLFSRAGLLQEAHEFIMNM---PIAPNGVVWG 418

Query: 547 CAISAC---SHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
             +  C    +  L EE   + + L      +P+ D +Y  + ++   AGR  +
Sbjct: 419 ALLGGCKVHKNIKLAEEATRHLSKL------DPLNDGYYVVLSNIYAEAGRWED 466


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/650 (37%), Positives = 380/650 (58%), Gaps = 9/650 (1%)

Query: 171  LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            L+L     +++MY KC +   AYK+FD MPER++VSW+ +++G   NG  + +L L + M
Sbjct: 410  LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 231  HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
              +G   +  T  + L A   + +L  G  +HG+ ++ GF+ +V V  +LVDMY+KCGR+
Sbjct: 470  GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 291  ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALH 348
              A  VF  +  R+++SWN+MIA +V  G   +A+  F  M +  ++  P   T+   L 
Sbjct: 530  NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 349  ACADLGDLERGIFVHKLLDQ--LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
            AC+  G +  G  +H  L +      +  ++T SL+ +Y KC  +  A   F +++ KT+
Sbjct: 590  ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 407  VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            +SW+++ILGYAQ G   EA+  F +++  N + DSF + S+I   A+ +++R  K + AL
Sbjct: 650  ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 467  VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
             ++        V+ +++DMY KCG V  A   F  M  + V +W V+I GYG HGLGK +
Sbjct: 710  AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 527  VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
            V +F +ML    +P+++ +L  +SACSHSG+++EG   F+ L + +GI+P ++HY  +VD
Sbjct: 770  VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 587  LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
            LLGRAGRL EA   I  MPI+P + ++  +L  C++H ++ELG++    L  +D      
Sbjct: 830  LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889

Query: 647  HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
            +V+++N+Y  A  W++    R +   KGL+K  G S VE++ EVH F SG   HP +  I
Sbjct: 890  YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 949

Query: 707  YTFLETLIDEIKAA-GYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLN---SSPGS 761
               L+     ++   GYV    + +HD++D  +E  L +HSEKLAI   L     +  G 
Sbjct: 950  QETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK 1009

Query: 762  TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            TI + KNLRVC DCH   K +S +T    +VRD  RFH F++G CSCGDY
Sbjct: 1010 TIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 244/456 (53%), Gaps = 9/456 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++CK      A +VF+ +P++    +  ++ G+     L  ++S    M    + P 
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + ++  LK CG +  + +G +IHG  +  GF + +     +V+MY+KCG+I EA K+F 
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--RRGDFITIVSILPAVANVGSL 255
           R+ +R L+SWN ++AGF   G+   ALD    M E     R D  T+ S+L A ++ G +
Sbjct: 538 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597

Query: 256 RIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             GK +HG+ +R+GF   S   ++ +LVD+Y KCG + +AR  FD +K + ++SW+S+I 
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G   EAM +F+++ +   +  +  +   +   AD   L +G  +  L  +L  G 
Sbjct: 658 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           + S+ NS++ MY KC  VD A   F+++Q K ++SW  +I GY ++G   +++  F +M 
Sbjct: 718 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 777

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAV 492
             NI+PD    ++V+ A +   +I+  + + + ++ +   +  V     ++D+  + G +
Sbjct: 778 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 837

Query: 493 GTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGK 524
             A+ L D M  + +V  W  ++     HG   LGK
Sbjct: 838 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 873


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/572 (40%), Positives = 359/572 (62%), Gaps = 5/572 (0%)

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD---MYAKCGRVETARLVFDGMKS 302
           L  ++   SL   K +  Y ++    S ++V T L++   +      ++ A  +FD +  
Sbjct: 33  LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           ++++ +N M   Y    +P  A  +F ++L  G+ P + T    L ACA    L  G+ +
Sbjct: 93  KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H    +L L  ++ +  +LI+MY++C  ++ A  +F +++   +VS+NA+I GYA++ + 
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 212

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           NEAL+ F ++++ NI+P   TM+SVI + A L  +   KWIH  V +  F+K V V TAL
Sbjct: 213 NEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTAL 272

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDM+AKCG++  A ++F+ M  R    W+ MI  + THG G  A+ +F +M     +P++
Sbjct: 273 IDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDE 332

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           ITFL  + ACSH+GLVE+G  YF S+ K YGI P + HYG MVDLLGRAG L+EA++F+ 
Sbjct: 333 ITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVD 392

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           K+ I+    ++  +L AC  H NVE+ ++   R+FELD   GG +V+L+N+YA    W+ 
Sbjct: 393 KLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWED 452

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  +R +M+ +G+ K PGCS VE+ N VH F+SG   H  S  +   L+ L+ EIK  GY
Sbjct: 453 VNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGY 512

Query: 723 VPDTNSIH--DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           VPDT+ ++  D+E+  +E +L  HSEKLA+AFGLLN+ PG+TI + KNLR+CGDCHNA K
Sbjct: 513 VPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAK 572

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IS + GR+I++RD+ RFH F++G CSCGD+W
Sbjct: 573 LISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 221/425 (52%), Gaps = 20/425 (4%)

Query: 7   CQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKS 66
           CQ   FT + P+    +++  ++Q          HP +LL + CTSL EL++I    IK+
Sbjct: 9   CQ---FTLTKPSSAFSKNEFVINQL---------HPLSLLSK-CTSLNELKQIQAYTIKT 55

Query: 67  GLCDQHLFQTKLVSLFCKYNS----LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            L       TKL++ FC  N     +  A  +F+ I DK   L++ M +GYA+  S   A
Sbjct: 56  NLQSDISVLTKLIN-FCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLA 114

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            S    +    + P  Y ++ LLK C     +R G  +H   +  G + +++    ++NM
Sbjct: 115 FSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINM 174

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YA+C  +  A  +FD M +  +VS+N I+ G+A++     AL L   +         +T+
Sbjct: 175 YAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTM 234

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +S++ + A +G+L +GK +H Y  + GFD  V V+TAL+DM+AKCG +  A  +F+GM+ 
Sbjct: 235 LSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRV 294

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-F 361
           R+  +W++MI A+   G+  +A+ +F++M  +GV P  +T +  L+AC+  G +E+G  +
Sbjct: 295 RDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGY 354

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNG 420
            + +     +   +     ++ +  +   +D A +   KL+ K T + W  ++   + +G
Sbjct: 355 FYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHG 414

Query: 421 RVNEA 425
            V  A
Sbjct: 415 NVEMA 419



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 203/397 (51%), Gaps = 8/397 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMP 200
           LL  C  + E+   K+I    I      D+  +T ++N   +      ++ A+ +FD++ 
Sbjct: 35  LLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQIL 91

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ++D++ +N +  G+A++    LA  L   +   G   D  T  S+L A A+  +LR G  
Sbjct: 92  DKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMG 151

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H +A++ G +  + +   L++MYA+C  +  AR VFD M+   +VS+N++I  Y     
Sbjct: 152 LHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQ 211

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           P EA+ +F+++    +EPT+VT++  + +CA LG L+ G ++H+ + +      V +  +
Sbjct: 212 PNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTA 271

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI M++KC  +  A  IF  ++ +   +W+AMI+ +A +G   +A++ F +M+ + ++PD
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPD 331

Query: 441 SFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T + ++ A +   ++   + + +++         +     ++D+  + G +  A    
Sbjct: 332 EITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFV 391

Query: 500 DMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKMLE 535
           D +  +     W  ++    THG  + A  +  ++ E
Sbjct: 392 DKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFE 428


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/718 (36%), Positives = 412/718 (57%), Gaps = 49/718 (6%)

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
           PIP  +   +    K +  FA+  +  SF   ++          Y+ L++ C  +  I  
Sbjct: 48  PIPPSIVKSFTCAAKSF--FATAHNGASFSESLQL---------YSSLIQQCIGIKSITD 96

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
             +I    +  GF   L     +++ Y KCG +  A K+FD +P R +V+WN+++A + +
Sbjct: 97  ITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIR 154

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD-SIVN 275
           NG ++ A+D+  RM  +G   D  T  S+  A +++G +  G+  HG ++  G   S V 
Sbjct: 155 NGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVF 214

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V +ALVDMYAK G++  ARLV D +  ++VV + ++I  Y   G   E++++F+ M  +G
Sbjct: 215 VGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKG 274

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           +E    T+   L  C +L DL  G  +H L+ +  L                        
Sbjct: 275 IEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGL------------------------ 310

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
                   ++ V+W ++I+G  QNGR   AL  F +M   +I P+SFT+ SV+ A + L+
Sbjct: 311 --------ESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLA 362

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           ++   K IHA+V++   + + +V  ALID Y KCG+   AR++F+ + E  V + N MI 
Sbjct: 363 MLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIY 422

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            Y  +G G  A++LF+ M +   +PN++T+L  +SAC+++GL+EEG H F+S +    IE
Sbjct: 423 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 482

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
              DHY  MVDLLGRAGRL EA   I ++ I   + ++  +L AC+IH +VE+ ++  NR
Sbjct: 483 LTKDHYACMVDLLGRAGRLKEAEMLINQVNISD-VVIWRTLLSACRIHGDVEMAKRVMNR 541

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           + +L P++GG HVLL+N+YA+   W K+ ++++ M +  L+K P  S V+++ E+H+F +
Sbjct: 542 VIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMA 601

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HP  + I   LE LI+++K  GYVPDT  +  D+++  +   L  HSEKLA+AF L
Sbjct: 602 GDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFAL 661

Query: 755 LNSS-PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
             S+   +TI I KNLRVCGDCH   K++S + GR+II RD+ RFH F+NG+CSCGDY
Sbjct: 662 WRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 233/495 (47%), Gaps = 39/495 (7%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L++ C  +K   ++ +I    +K G    H    KL+  + K  S+  A +VF+ +P + 
Sbjct: 84  LIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRH 141

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++M+  Y +     +A+    RM  D + P  + ++ + K   D+G +  G+  HG
Sbjct: 142 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 201

Query: 163 QLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
           Q +V G  + ++F  + +V+MYAK G++ +A  + D++  +D+V +  ++ G++ +G   
Sbjct: 202 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 261

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            +L +   M ++G   +  T+ S+L    N+  L  G+ +HG  ++AG +S V       
Sbjct: 262 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAV------- 314

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
                                    +W S+I   V+ G  E A+  F++ML   + P + 
Sbjct: 315 -------------------------TWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 349

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L AC+ L  LE+G  +H ++ +  L  D  +  +LI  Y KC   + A  +F+ L
Sbjct: 350 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 409

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +VS N+MI  YAQNG  +EAL  F  M+   ++P++ T + V+ A     ++    
Sbjct: 410 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 469

Query: 462 WIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
            I +    S   E        ++D+  + G +  A  L + +N   V  W  ++     H
Sbjct: 470 HIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIH 529

Query: 521 GLGKAAVELFNKMLE 535
           G  + A  + N++++
Sbjct: 530 GDVEMAKRVMNRVID 544


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/689 (35%), Positives = 401/689 (58%), Gaps = 20/689 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L+ C D   +   ++IH  ++  G   D F MT +VN+YAKCG +E A K+FD +P
Sbjct: 72  YVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP 131

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            R++VSW T++ G+  +   ELA+ +   M E G      T+ + L A +++ S  +GK 
Sbjct: 132 RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQ 191

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HGY+++   +   ++  +L  +Y+KCG +E A   F  ++ +NV+SW ++I+A+ + G 
Sbjct: 192 IHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGE 251

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
               ++ F +ML + VEP   T+  AL  C  +  L+ G  +H L  +L   +++ + NS
Sbjct: 252 AATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNS 311

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA-------------QNGRVNEALN 427
           ++ +Y KC  +  A  +F +++  +LV+WNAMI G+A             Q G   EAL+
Sbjct: 312 IMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCG--TEALS 369

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F K+    +KPD FT  SV+   + L  +   + +HA  I++ F  +V V TAL++MY 
Sbjct: 370 IFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYN 429

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG++  A   F  M+ R + +W  MI GY  +G  + A+ LF  M     +PN ITF+ 
Sbjct: 430 KCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVG 489

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH+G+V+E + YF  +K +Y I PVMDHY  ++D+  R GRL+EA+DFI++M +E
Sbjct: 490 VLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLE 549

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   ++  ++  C+    +ELG  AA +L  L P +   + LL N+Y +A  W ++++VR
Sbjct: 550 PNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVR 609

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
            +M+++ L +    S + +K++++SF   +  H QS  +Y  L  L ++ K+ GY  + +
Sbjct: 610 KMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKSFGYEWEES 669

Query: 728 ---SIHDVEDYVQENLLS--SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
              +  + +   ++ L S   HSEKLAIAFGLLN+S    I + K++ +C DCHN  + I
Sbjct: 670 LEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMCRDCHNFIRII 729

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           SL++ REII+RD  R H F NG CSCGD+
Sbjct: 730 SLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 255/526 (48%), Gaps = 44/526 (8%)

Query: 46  LLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C   K   + ++I   I+K+G        T LV+++ K  ++  A +VF+ +P + 
Sbjct: 75  ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRN 134

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + T++ GY   +  + AV     M      P  Y     L    D+     GK+IHG
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHG 194

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I      D      + ++Y+KCG +E A K F R+ +++++SW T+++ +  NG A  
Sbjct: 195 YSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAAT 254

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L     M  E    +  T+ S L     + SL IG  +H   ++ GF+S + +  +++ 
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMY 314

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-----------PEEAMRIFQKM 331
           +Y KCG +  A+ +FD M++ ++V+WN+MIA +    +             EA+ IF K+
Sbjct: 315 LYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKL 374

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              G++P   T    L  C+ L  LE+G  VH    +    +DV +  +L++MY+KC  +
Sbjct: 375 NRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSI 434

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +RA+  F ++  +TL+SW +MI GYAQNG+  +AL  F  MR   ++P+  T V V+ A 
Sbjct: 435 ERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSAC 494

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMT-------ALIDMYAKCGAVGTARALFDMMNE 504
           +   ++  A     ++      KN + +T        LIDM+ + G +  A   FD + E
Sbjct: 495 SHAGMVDEALDYFQMM------KNEYKITPVMDHYACLIDMFVRLGRLDEA---FDFIKE 545

Query: 505 RHVT----TWNVMIDGYGTHG---LG-KAAVELFNKMLEGPTKPND 542
             +      W+++I G  + G   LG  AA +L N       KP D
Sbjct: 546 MDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLN------LKPKD 585


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 420/775 (54%), Gaps = 14/775 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  CTSL+    +   I ++        +  L++ +C+      A R+ + +P +    
Sbjct: 17  LLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVS 76

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ ++  Y++      ++  L R R   V    ++Y   L  C   G +R G+ +H   I
Sbjct: 77  FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAI 136

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           ++G S  +F    +V+MY+KCG++ EA ++FD   ERD VSWN++V+G+ + G  E  + 
Sbjct: 137 LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +   M   G   +   + S++   +  G  ++ I +AVHG  ++AG DS V + +A++DM
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDM 256

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN------PEEAMRIFQKMLDQGVE 337
           YAK G +  A  +F  ++  NVV +N+MIA +             EA+ ++ ++  +G++
Sbjct: 257 YAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           PT  T    L AC   G LE G  +H  + +     D  + ++LI +Y     ++     
Sbjct: 317 PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRC 376

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F       +V+W AM+ G  QN    +AL+ F +     +KPD FT+ SV+ A A L+V 
Sbjct: 377 FRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA 436

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           R  + I     +S F++   +  + + MYA+ G V  A   F  M    V +W+ +I  +
Sbjct: 437 RAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCH 496

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG  + A+  F++M++    PN+ITFL  ++ACSH GLV+EG+ Y+ ++ KDYG+ P 
Sbjct: 497 AQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPT 556

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           + H   +VDLLGRAGRL +A  FI          ++ ++L +C+IH+++E G+  ANR+ 
Sbjct: 557 IKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIM 616

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           EL+P     +V+L N+Y  A      +K R +M+++G++K PG S +ELK  VHSF +G 
Sbjct: 617 ELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGD 676

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
             HP+S  IYT LE ++  I+         S        ++NL++ HSEKLA+A G+++ 
Sbjct: 677 KSHPESSAIYTKLEEMLSRIEKLATTDTEISKR------EQNLMNCHSEKLAVALGMIHL 730

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              + I + KNLRVC DCH+  K IS    REII+RD  RFH F++G CSC DYW
Sbjct: 731 PQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/571 (40%), Positives = 360/571 (63%), Gaps = 2/571 (0%)

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+L +  +  +L  GK +H      G     +++T LV +YA    +  AR +FD +  
Sbjct: 51  TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           +N+  WN +I  Y   G  + A+ ++ KMLD G+ P N T+   L AC+ L  +  G  +
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H+ + +     D+ +  +LI MY+KC  V  A  +F K+  +  V WN+M+  YAQNG  
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           +E+++   +M +  ++P   T+V+VI + A+++ + Y + IH    R  F+ N  V TAL
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMYAKCG+V  A ALF+ + E+ V +WN +I GY  HGL   A++LF+KM +   +P+ 
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK-EDRPDH 349

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           ITF+  ++ACS   L++EG   +  + +DYGI P + HY  M+DLLG  G+L+EA+D I+
Sbjct: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            M ++P   V+GA+L +CKIH NVEL E A  +L EL+PD+ G +V+LAN+YA +  W+ 
Sbjct: 410 NMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEG 469

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           + K+R +M  K ++K   CS +E+KN+V++F +G   H  S  IY  L+ L   +  AGY
Sbjct: 470 VEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGY 529

Query: 723 VPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
            PDT S+ HDVE+  + +++ SHSE+LAIAFGL+++SPG+ + I KNLR+C DCH A K+
Sbjct: 530 APDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKF 589

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS +  REI VRD++R+H FK+G+CSCGD+W
Sbjct: 590 ISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 207/405 (51%), Gaps = 6/405 (1%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLF 82
            T S  ++ P     +    LL+ C   K L   +++       G+       TKLV L+
Sbjct: 33  QTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLY 92

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
              NSL +A  +F+ IP +   L++ +++GYA     D+A+    +M    + P  +   
Sbjct: 93  AVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLP 152

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           ++LK C  +  I  G+ IH  +I +G+  DLF    +++MYAKCG + +A ++FD++  R
Sbjct: 153 FVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR 212

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           D V WN+++A +AQNG  + ++ L   M   G R    T+V+++ + A+V  L  G+ +H
Sbjct: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIH 272

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           G+  R GF S   V TAL+DMYAKCG V+ A  +F+ ++ + VVSWN++I  Y   G   
Sbjct: 273 GFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSL 381
            A+ +F KM  +   P ++T +  L AC+    L+ G  ++ L+     +   V     +
Sbjct: 333 GALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCM 391

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEA 425
           I +   C ++D A D+   +  K     W A++     +G V  A
Sbjct: 392 IDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELA 436


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/754 (34%), Positives = 423/754 (56%), Gaps = 10/754 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G C        L++ + K     DA  +F+ +P++ +  + T+ +GYA      D 
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDP 130

Query: 123 VSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +    R+  +  ++ P V+     L V  D  EI     +H  ++  G+  + F    ++
Sbjct: 131 IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNAFVGAALI 188

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           N Y+ CG ++ A  +F+ +  +D+V W  IV+ + +NG+ E +L L++ M   G   +  
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  + L A   +G+    K VHG  ++  +     V   L+ +Y + G +  A  VF+ M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              +VV W+ MIA + + G   EA+ +F +M +  V P   T+   L+ CA       G 
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H L+ ++    D+ ++N+LI +Y+KC+K+D A  +F++L  K  VSWN +I+GY   G
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              +A + F +     +     T  S + A A L+ +     +H L I++   K V V  
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +LIDMYAKCG +  A+++F+ M    V +WN +I GY THGLG+ A+ + + M +   KP
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TFL  +S CS++GL+++G   F S+ +D+GIEP ++HY  MV LLGR+G+L++A   
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKL 608

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+ +P EP + ++ AML A     N E   ++A  + +++P +   +VL++N+YA A  W
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQW 668

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
             +A +R  M++ G++K PG S +E + +VH F  G + HP  K I   LE L  +   A
Sbjct: 669 ANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRA 728

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN-SSPGSTIHIRKNLRVCGDCHNA 778
           GYVPD N++  D++D  ++  L  HSE+LA+A+GL+   S  + I I KNLR+C DCH+A
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K IS +  R++++RDM+RFH F  GVCSCGD+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 225/434 (51%), Gaps = 6/434 (1%)

Query: 132 DDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           D + P + ++ Y  +L+ C    +    K IH  ++  G  LDLFA   ++N Y K G  
Sbjct: 41  DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           ++A  +FD MPER+ VS+ T+  G+A     +  + L +R+H EG   +     S L   
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLF 156

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
            ++    I   +H   ++ G+DS   V  AL++ Y+ CG V++AR VF+G+  +++V W 
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +++ YVE G  E+++++   M   G  P N T   AL A   LG  +    VH  + + 
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               D  +   L+ +Y++   +  A  +F+++    +V W+ MI  + QNG  NEA++ F
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +MR   + P+ FT+ S++   A        + +H LV++  F+ +++V  ALID+YAKC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
             + TA  LF  ++ ++  +WN +I GY   G G  A  +F + L       ++TF  A+
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456

Query: 550 SACSHSGLVEEGIH 563
            AC+    ++ G+ 
Sbjct: 457 GACASLASMDLGVQ 470



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 135/285 (47%), Gaps = 4/285 (1%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C+ L E  ++  L++K G          L+ ++ K   +  A ++F  +  K +  ++T+
Sbjct: 363 CSGLGE--QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + GY        A S       + V+     ++  L  C  +  +  G ++HG  I    
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +     +++MYAKCG I+ A  +F+ M   D+ SWN +++G++ +G    AL ++  
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCG 288
           M +   + + +T + +L   +N G +  G+      +R  G +  +   T +V +  + G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600

Query: 289 RVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           +++ A  + +G+    +V+ W +M++A +   N E A R  +++L
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 420/775 (54%), Gaps = 14/775 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  CTSL+    +   I ++        +  L++ +C+      A R+ + +P +    
Sbjct: 17  LLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVS 76

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++ ++  Y++      ++  L R R   V    ++Y   L  C   G +R G+ +H   I
Sbjct: 77  FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAI 136

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           ++G S  +F    +V+MY+KCG++ EA ++FD   ERD VSWN++V+G+ + G  E  + 
Sbjct: 137 LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +   M   G   +   + S++   +  G  ++ I +AVHG  ++AG DS V + +A++DM
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDM 256

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN------PEEAMRIFQKMLDQGVE 337
           YAK G +  A  +F  ++  NVV +N+MIA +             EA+ ++ ++  +G++
Sbjct: 257 YAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           PT  T    L AC   G LE G  +H  + +     D  + ++LI +Y     ++     
Sbjct: 317 PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRC 376

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F       +V+W AM+ G  QN    +AL+ F +     +KPD FT+ SV+ A A L+V 
Sbjct: 377 FRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA 436

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           R  + I     +S F++   +  + + MYA+ G V  A   F  M    V +W+ +I  +
Sbjct: 437 RAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCH 496

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HG  + A+  F++M++    PN+ITFL  ++ACSH GLV+EG+ Y+ ++ KDYG+ P 
Sbjct: 497 AQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPT 556

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           + H   +VDLLGRAGRL +A  FI          ++ ++L +C+IH+++E G+  ANR+ 
Sbjct: 557 IKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIM 616

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           EL+P     +V+L N+Y  A      +K R +M+++G++K PG S +ELK  VHSF +G 
Sbjct: 617 ELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGD 676

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
             HP+S  IYT LE ++  I+         S        ++NL++ HSEKLA+A G+++ 
Sbjct: 677 KSHPESSAIYTKLEEMLSRIEKLATTDTEISKR------EQNLMNCHSEKLAVALGMIHL 730

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              + I + KNLRVC DCH+  K IS    REII+RD  RFH F++G CSC DYW
Sbjct: 731 PQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/637 (38%), Positives = 390/637 (61%), Gaps = 5/637 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL   +++   +I SGL    + ++ LV+ +     + +A ++F+ +  +   LY+ M+K
Sbjct: 36  SLTSTKQLHAHLITSGLLSIDI-RSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIK 94

Query: 112 GY-AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            Y AK    +    FL  +   D  P  Y Y +++K C ++  +  G+ +HG  +V+ F 
Sbjct: 95  MYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFG 154

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             LF +  ++ MY  CG++EEA K+FD M E+ +VSWNT++ G+ +NGFA  AL +  +M
Sbjct: 155 SHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQM 214

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            + G   D  ++VS+LPA   +  L +G+ VHG          + VS ALVDMYAKCG +
Sbjct: 215 VDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSM 273

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + ARLVFD M  R+VVSW SMI  Y+  G+ + A+ +F+ M  +G+ P +VTI   L AC
Sbjct: 274 DEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLAC 333

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A L +L+ G  +H  + + +L ++V++  SLI MY+KC  +  +  +F++   K  V WN
Sbjct: 334 ASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWN 393

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           A++ G   N    EA+  F KM  + ++ ++ T  S++PA   L+ ++    I++ ++RS
Sbjct: 394 ALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRS 453

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVE 528
            F  N+ V T+LID+Y+KCG++ +A  +F+ +  + + +  W+++I GYG HG G+ AV 
Sbjct: 454 GFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVS 513

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF +M++   KPND+TF   + +CSH+G+V++G++ F  + KD+   P  DHY  MVDLL
Sbjct: 514 LFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLL 573

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAGR++EA+D I+ MP  PG  V+GA+LGAC +H+NVELGE AA  LFEL+P   G +V
Sbjct: 574 GRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYV 633

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           LLA +YAA   W+    VR  M+  GL+K P  SL+E
Sbjct: 634 LLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 257/498 (51%), Gaps = 9/498 (1%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEA 192
           +AP    Y  LLK  G    +   K++H  LI +G  S+D+ ++  +V  YA CG +  A
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSV--LVATYAHCGYVHNA 74

Query: 193 YKMFDRMPERDLVSWNTIVAGF-AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
            K+FD + +R  + +N ++  + A+  + E     +  +  +    D  T   ++ A + 
Sbjct: 75  RKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSE 134

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +  +  G+ +HG  + + F S + V  +L+ MY  CG VE AR VFD MK ++VVSWN+M
Sbjct: 135 LLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTM 194

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y + G    A+ +F +M+D GVE    +++  L AC  L +LE G  VH L+++  L
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVL 254

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           G  + ++N+L+ MY+KC  +D A  +F  +  + +VSW +MI GY  NG    AL+ F  
Sbjct: 255 GKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKI 313

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M+ + ++P+S T+  ++ A A L+ ++  + +H  V++      V V T+LIDMYAKC  
Sbjct: 314 MQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNC 373

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           +G + ++F   + +    WN ++ G   + L   A+ LF KML    + N  T  C    
Sbjct: 374 LGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAAT--CNSLL 431

Query: 552 CSHSGLVE-EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE-PG 609
            ++  L + + ++   S     G    +    +++D+  + G L  A      +P++   
Sbjct: 432 PAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQD 491

Query: 610 ITVFGAMLGACKIHKNVE 627
           I V+  ++    +H + E
Sbjct: 492 IFVWSIIIAGYGMHGHGE 509



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 7/157 (4%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY-- 106
           +   L+ +  I   +++SG        T L+ ++ K  SL  A ++F  IP  +  ++  
Sbjct: 436 ILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVW 495

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
             ++ GY      + AVS   +M    V P    +T +L+ C   G +  G  +   ++ 
Sbjct: 496 SIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK 555

Query: 167 NGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  ++   D +  T +V++  + G+++EAY +   MP
Sbjct: 556 DHQTIPNDDHY--TCMVDLLGRAGRMDEAYDLIKTMP 590


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 360/597 (60%), Gaps = 39/597 (6%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           +++G+  H   +  G      ++  +V MYA  G +++A +VFD + + + + +NS+I A
Sbjct: 93  IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152

Query: 315 YVEGGNPEEA---MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           Y   G        +  + +M   G+   N T+   L +CADL  +  G  VH    ++ L
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGL 212

Query: 372 GTDVSMTNSLISMYSKC-------KKVDR------------------------AADIFSK 400
             D  +  SLI MY KC       K  D+                        A D+F +
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 272

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPALAELSVIR 458
           ++ + +VSW AMI GY QNG   +AL  F +M      +KP+  T+VSV+PA A+ + + 
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDG 516
             + IH          N  V TAL  MYAKC ++  AR  FDM+  N +++  WN MI  
Sbjct: 333 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 392

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y +HG G  AV +F  ML    +P+ +TF+  +S CSHSGL++ G+++F  +   + +EP
Sbjct: 393 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEP 452

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HY  +VDLLGRAGRL EA + I +MP++ G +V+GA+L AC+ H+N+E+ E AA RL
Sbjct: 453 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL 512

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
           F L+PD  G +VLL+N+YA A MW+++ K+R +++ +G++K+PGCS +E+  + H F   
Sbjct: 513 FVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGA 572

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQ+K IY FLE L ++IK AGY+PDT+ + HD+ +  +E  L++HSEKLAIAFGLL
Sbjct: 573 DKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLL 632

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           N+ PG  + + KNLR+CGDCH ATK+IS +  REIIVRD++RFHCFK+G CSCGDYW
Sbjct: 633 NTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 40/407 (9%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           I+ G++ H Q++++G   + F    +V MYA  G ++ A  +FDR+     + +N+I+  
Sbjct: 93  IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152

Query: 214 FAQNGFAELA---LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + ++G        L+   RMH  G  GD  T+  +L + A++  + +G+ VHG  +R G 
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGL 212

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGM------------------------------ 300
           +    V  +L+DMY KCG +  AR +FD M                              
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 272

Query: 301 -KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLE 357
            + RN+VSW +MI+ Y + G  E+A+ +F +ML  G E  P  VTI+  L ACA    LE
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAMILG 415
           RG  +H   + + L  + S+  +L  MY+KC  +  A   F  +   GK L++WN MI  
Sbjct: 333 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 392

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEK 474
           YA +G   EA++ F  M    ++PD+ T + ++   +   +I       + +      E 
Sbjct: 393 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEP 452

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
            V     ++D+  + G +  A+ L   M  +   + W  ++    +H
Sbjct: 453 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 164/336 (48%), Gaps = 38/336 (11%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+  GL        K+V+++     L  A  VF+ I +    LY+++++ Y +       
Sbjct: 103 IVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXX 162

Query: 123 VSFL---IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
              L    RM +  +    +   ++LK C D+  +  G+ +HGQ +  G   D +    +
Sbjct: 163 XXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASL 222

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF------------------------- 214
           ++MY KCG I +A K+FD+M  RD+ SWN ++AG+                         
Sbjct: 223 IDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWT 282

Query: 215 ------AQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
                  QNGFAE AL L   M ++G   + +++TIVS+LPA A   +L  G+ +H +A 
Sbjct: 283 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFAN 342

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEA 324
             G     +V TAL  MYAKC  +  AR  FD      +N+++WN+MI AY   G   EA
Sbjct: 343 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 402

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           + IF+ ML  GV+P  VT M  L  C+  G ++ G+
Sbjct: 403 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL 438


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/684 (35%), Positives = 387/684 (56%), Gaps = 5/684 (0%)

Query: 46  LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ CT    L + R+    ++ +G+    +  TKL+ ++    +  DA  +F  +    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ M++G+      D A+ F  +M      P  Y + Y++K CG +  +  G+ +H 
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++   GF LD+F  + ++  Y++ G I +A  +FDRMP +D V WN ++ G+ +NG  + 
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTAL 280
           A  +   M       + +T   +L   A+   +  G  +HG  + +G   DS V  + AL
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +D+Y KC  VE AR +FD     ++V   +MI+ YV  G    A+ IF+ +L + +   +
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VT+   L ACA L  L  G  +H  + +   G    + ++++ MY+KC ++D A   F  
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K  V WN+MI   +QNG+  EA++ F +M     K D  ++ + + A A L  + Y 
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IHA ++R  F  ++F  +ALIDMY+KCG +  A  +FD M E++  +WN +I  YG H
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  K ++ LF+ ML    +P+ +TFL  ISAC H+G V+EGIHYF  + ++ GI   M+H
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 591

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVDL GRAGRLNEA+  I  MP  P   V+G +LGAC++H NVEL E A+  LF+LD
Sbjct: 592 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD 651

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P   GY+VLL+N++A A  W+ + K+R++M+++G+QK PGCS +++ N  H F +    H
Sbjct: 652 PQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSH 711

Query: 701 PQSKRIYTFLETLIDEIKAAGYVP 724
           PQS +IY  L+ L  E++  GYVP
Sbjct: 712 PQSSQIYLLLKNLFLELRKEGYVP 735



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 162/364 (44%), Gaps = 15/364 (4%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +VSIL    +   L  G+  H   +  G      + T L+ MY  CG    A+ +F  ++
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
                 WN MI  +   G  + A+  + KML  G  P   T    + AC  L  +  G  
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  +  +    DV + +SLI  YS+   +  A  +F ++  K  V WN M+ GY +NG 
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT- 480
            + A   F +MR     P+S T   V+   A   +I +   +H LV+ S  E +  V   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 481 -ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            ALID+Y KC  V  AR +FD      +     MI GY  +G+   A+E+F  +L+   +
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG------AMVDLLGRAGR 593
            N +T    + AC+       G+   T  K+ +G      H G      A++D+  + GR
Sbjct: 349 ANSVTLASVLPACA-------GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGR 401

Query: 594 LNEA 597
           L+ A
Sbjct: 402 LDLA 405



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 137/289 (47%), Gaps = 11/289 (3%)

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           D  + P  V+I   L  C D   L +G   H  +    +G +  +   L+ MY  C    
Sbjct: 42  DDSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFL 98

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A +IF +L+      WN MI G+   G+ + AL ++ KM      PD +T   VI A  
Sbjct: 99  DAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG 158

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            L+ +   + +H  +    FE +VFV ++LI  Y++ G +  AR LFD M  +    WNV
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNV 218

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           M++GY  +G    A  +F +M    T PN +TF C +S C+   ++  G      L    
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ-LHGLVVSS 277

Query: 573 GIE---PVMDHYGAMVDLLGRAGRLNEAWD-FIQKMPIEPGITVFGAML 617
           G+E   PV + + A++D+  +   +  A   F Q+ P++  I V  AM+
Sbjct: 278 GLEMDSPVANTF-ALIDIYFKCRDVEMARKIFDQRTPVD--IVVCTAMI 323


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 363/584 (62%), Gaps = 5/584 (0%)

Query: 233  EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            +G   +F    S+L    +  ++R G+ VH + ++  ++  V + T L+ +Y KC  +  
Sbjct: 471  QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 530

Query: 293  ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
            AR V D M  RNVVSW +MI+ Y + G   EA+ +F +ML  G  P   T    L +C  
Sbjct: 531  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590

Query: 353  LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
                + G  +H L+ +    + + + +SL+ MY+K  K+  A  +F  L  + +VS  A+
Sbjct: 591  SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 650

Query: 413  ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
            I GYAQ G   EAL+ F +++ + ++ +  T  SV+ AL+ L+ + + + +H+ V+R+  
Sbjct: 651  ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 710

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
               V +  +LIDMY+KCG++  +R +FD M ER V +WN M+ GY  HGLG+ AVELF  
Sbjct: 711  PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 770

Query: 533  ML-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLG 589
            M  E   KP+ +TFL  +S CSH G+ + G+  F  +  +KD G EP ++HYG +VDL G
Sbjct: 771  MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFG 829

Query: 590  RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
            RAGR+ EA++FI+KMP EP   ++G++LGAC++H+NV +GE  A RL E++ +  G +V+
Sbjct: 830  RAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI 889

Query: 650  LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
            L+N+YA+A  WD +  VR +M++K + K PG S +EL   +H+F++    HP+ + ++  
Sbjct: 890  LSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAK 949

Query: 710  LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
            +  L  +IK AGYVP+ + + +DV+D  +E +L  HSEKLA+AFGL+ +  G+ + I KN
Sbjct: 950  VRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKN 1009

Query: 769  LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            LR+C DCHN  K++S V GRE+ +RD +RFH    G CSCGDYW
Sbjct: 1010 LRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 202/367 (55%), Gaps = 4/367 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           T+++E +R+   +IK+        +T+L+ L+ K   L DA RV + +P++    +  M+
Sbjct: 491 TAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMI 550

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY++     +A+   + M     AP  + +  +L  C      + G++IH  +I   F 
Sbjct: 551 SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 610

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             +F  + +++MYAK G+I EA ++FD +PERD+VS   I++G+AQ G  E ALDL  R+
Sbjct: 611 SHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 670

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             EG R +++T  S+L A++ + +L  G+ VH + +RA     V +  +L+DMY+KCG +
Sbjct: 671 QREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSL 730

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHA 349
             +R +FD M  R V+SWN+M+  Y + G   EA+ +F+ M ++  V+P +VT +  L  
Sbjct: 731 TYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSG 790

Query: 350 CADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TL 406
           C+  G  +RG  IF   +  +     ++     ++ ++ +  +V+ A +   K+  + T 
Sbjct: 791 CSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA 850

Query: 407 VSWNAMI 413
             W +++
Sbjct: 851 AIWGSLL 857



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 205/384 (53%), Gaps = 4/384 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  +L  C     IR G+ +H  +I   +   ++  T ++ +Y KC  + +A ++ D MP
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++VSW  +++G++Q G+A  AL L   M   G   +  T  ++L +  +    ++G+ 
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   ++  F+S + V ++L+DMYAK G++  AR VFDG+  R+VVS  ++I+ Y + G 
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ +F+++  +G+    VT    L A + L  L+ G  VH  + + KL   V + NS
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKP 439
           LI MYSKC  +  +  IF  +  +T++SWNAM++GY+++G   EA+  F  M+ +N +KP
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVI--RSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           DS T ++V+   +   +      I   ++  +  FE  +     ++D++ + G V  A  
Sbjct: 780 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839

Query: 498 LFDMMN-ERHVTTWNVMIDGYGTH 520
               M  E     W  ++     H
Sbjct: 840 FIKKMPFEPTAAIWGSLLGACRVH 863


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/756 (36%), Positives = 431/756 (57%), Gaps = 16/756 (2%)

Query: 44   ALLLEVCTS----LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
            +L+   C+S    L  L ++L  + KSG        + LVS F ++    DA  +FE + 
Sbjct: 285  SLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMG 344

Query: 100  DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI----R 155
             +     + ++ G  K    + A      M+ D V     +Y  LL    +   +    R
Sbjct: 345  VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 403

Query: 156  RGKEIHGQLIVNGFSLDLFAM-TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
            +G+E+H  +I  G + +  A+  G+VNMYAK G I +A  +F+ M E+D VSWN++++G 
Sbjct: 404  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 463

Query: 215  AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
             QN  +E A +   RM   G      T++S L + A++G + +G+ +H   ++ G D+ V
Sbjct: 464  DQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523

Query: 275  NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG-GNPEEAMRIFQKMLD 333
            +VS AL+ +YA+ G       VF  M   + VSWNS+I A  +   +  +A++ F +M+ 
Sbjct: 524  SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR 583

Query: 334  QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             G   + VT +  L A + L   E    +H L+ +  L  D ++ N+L+S Y KC +++ 
Sbjct: 584  GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 643

Query: 394  AADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
               IF+++ + +  VSWN+MI GY  N  +++A++    M  K  + DSFT  +++ A A
Sbjct: 644  CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACA 703

Query: 453  ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
             ++ +     +HA  IR+C E +V V +AL+DMY+KCG +  A   F++M  R+V +WN 
Sbjct: 704  SVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNS 763

Query: 513  MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
            MI GY  HG G+ A++LF +M+     P+ +TF+  +SACSH G VEEG  +F S+ + Y
Sbjct: 764  MISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVY 823

Query: 573  GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNVELGE 630
             + P ++H+  MVDLLGRAG+L+E  DFI  MP++P + ++  +LGAC     +N ELG 
Sbjct: 824  RLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGR 883

Query: 631  KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            +AA  L EL+P     +VLLAN+YA+   W+ +AK RT M++  ++K  GCS V +K+ V
Sbjct: 884  RAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGV 943

Query: 691  HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLA 749
            H F +G   HP+   IY  L  L  +++ AGY+P T  ++ D+E   +E LLS HSEK+A
Sbjct: 944  HVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIA 1003

Query: 750  IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            +AF +L       I I KNLRVCGDCH+A  YIS +
Sbjct: 1004 VAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKI 1038



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 231/480 (48%), Gaps = 23/480 (4%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
            +E+H Q I  GF  +LF    ++N+Y + G +  A K+FD M  R+LV+W  +++G+ Q
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG--SLRIGKAVHGYAMRAGFDSIV 274
           NG  + A      M   G   +     S L A    G    ++G  +HG   +  + S V
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209

Query: 275 NVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            V   L+ MY  C      AR VFDG+  RN +SWNS+I+ Y   G+   A  +F  M  
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269

Query: 334 QGV----EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSK 387
           +G+    +P   T    +       D    +    L    K G   D+ ++++L+S +++
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNIKPDSFTMVS 446
               D A +IF ++  + +VS N +++G  +  +   A   F +M+    I  DS+  V 
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSY--VV 387

Query: 447 VIPALAELSVI----RYAKWIHALVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDM 501
           ++ A +E SV+    R  + +HA VIR+    N V +   L++MYAK GA+  A ++F++
Sbjct: 388 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 447

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG--LVE 559
           M E+   +WN +I G   +   + A E F++M    + P++ T +  +S+C+  G  ++ 
Sbjct: 448 MVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG 507

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           E IH    LK   G++  +    A++ L    G   E       MP E     + +++GA
Sbjct: 508 EQIHC-DGLK--LGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 563



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 283/619 (45%), Gaps = 29/619 (4%)

Query: 5   SQCQLSV--FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL 62
           +QC  S+    +   T T H +    S      S I R+  +     C S +E R +   
Sbjct: 43  NQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGS-----CCS-EEARELHLQ 96

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
            IK G          L++++ +   L  A ++F+ + ++    +  ++ GY +    D+A
Sbjct: 97  SIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEA 156

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            +    M      P  Y +   L+ C + G    + G +IHG +    +  D+     ++
Sbjct: 157 CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 216

Query: 181 NMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG----- 234
           +MY  C     +A  +FD +  R+ +SWN+I++ +++ G A  A DL + M +EG     
Sbjct: 217 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 276

Query: 235 --RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                 F ++++   +  + G L + + +     ++GF   + VS+ALV  +A+ G  + 
Sbjct: 277 KPNEYTFGSLITTACSSVDFG-LCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDD 335

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACA 351
           A+ +F+ M  RNVVS N ++   V+    E A ++F +M D  G+   +  ++  L A +
Sbjct: 336 AKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL--LSAFS 393

Query: 352 DLGDLE----RGIFVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           +   LE    +G  VH  + +  L  + V++ N L++MY+K   +  A  +F  +  K  
Sbjct: 394 EFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDS 453

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           VSWN++I G  QN    +A   F +MR     P +FT++S + + A L  I   + IH  
Sbjct: 454 VSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCD 513

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG-THGLGKA 525
            ++   + +V V  AL+ +YA+ G       +F +M E    +WN +I     +      
Sbjct: 514 GLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQ 573

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           AV+ F +M+ G    + +TF+  +SA S   L  E  H   +L   Y +        A++
Sbjct: 574 AVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALL 632

Query: 586 DLLGRAGRLNEAWDFIQKM 604
              G+ G +NE      +M
Sbjct: 633 SCYGKCGEMNECEKIFARM 651


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/662 (38%), Positives = 384/662 (58%), Gaps = 7/662 (1%)

Query: 157 GKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           G+ +H  ++  +   L  F    +VNMY+K      A  +      R +V+W ++++G  
Sbjct: 26  GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            N     AL   + M  E    +  T   +  A A++     GK +H  A++ G    V 
Sbjct: 86  HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V  +  DMY+K G    AR +FD M  RN+ +WN+ ++  V+ G   +A+  F+K L   
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVD 205

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            EP  +T    L+ACAD+  LE G  +H  + + +   DVS+ N LI  Y KC  +  + 
Sbjct: 206 GEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSE 265

Query: 396 DIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
            +FS++    + +VSW +++    QN     A   F + R K ++P  F + SV+ A AE
Sbjct: 266 LVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAE 324

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L  +   + +HAL +++C E+N+FV +AL+D+Y KCG++  A  +F  M ER++ TWN M
Sbjct: 325 LGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAM 384

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPT--KPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
           I GY   G    A+ LF +M  G      + +T +  +SACS +G VE G+  F S++  
Sbjct: 385 IGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGR 444

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YGIEP  +HY  +VDLLGR+G ++ A++FI++MPI P I+V+GA+LGACK+H   +LG+ 
Sbjct: 445 YGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKI 504

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA +LFELDPD+ G HV+ +N+ A+A  W++   VR  M   G++K  G S V +KN VH
Sbjct: 505 AAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVH 564

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAI 750
            F +  + H ++  I   L  L  E+K AGYVPD N S+ D+E+  + + +  HSEK+A+
Sbjct: 565 VFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIAL 624

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
           AFGL+    G  I I KNLR+C DCH+A K+IS + GREIIVRD +RFH FK+G CSC D
Sbjct: 625 AFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKD 684

Query: 811 YW 812
           YW
Sbjct: 685 YW 686



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 12/190 (6%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +V P  +  + +L  C ++G +  G+ +H   +      ++F  + +V++Y KCG IE A
Sbjct: 307 EVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYA 366

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG---DFITIVSILPAV 249
            ++F  MPER+LV+WN ++ G+A  G  ++AL L   M   G  G    ++T+VS+L A 
Sbjct: 367 EQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEM-TSGSCGIALSYVTLVSVLSAC 425

Query: 250 ANVGS----LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           +  G+    L+I +++ G   R G +        +VD+  + G V+ A      M     
Sbjct: 426 SRAGAVERGLQIFESMRG---RYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPT 482

Query: 306 VS-WNSMIAA 314
           +S W +++ A
Sbjct: 483 ISVWGALLGA 492



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 13/215 (6%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALL----LEVCTSLKEL---RRILPLIIKSGLCDQHL 73
           +  H+   +   ++ +R    P+  +    L  C  L  L   R +  L +K+ + +   
Sbjct: 289 VQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIF 348

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + LV L+ K  S+  A +VF  +P++    ++ M+ GYA    +D A+S    M    
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGS 408

Query: 134 VAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQI 189
              +  +Y  L+ V   C   G + RG +I   +    G          VV++  + G +
Sbjct: 409 CG-IALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLV 467

Query: 190 EEAYKMFDRMPERDLVS-WNTIVAGFAQNGFAELA 223
           + AY+   RMP    +S W  ++     +G  +L 
Sbjct: 468 DRAYEFIKRMPILPTISVWGALLGACKMHGKTKLG 502


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/744 (35%), Positives = 399/744 (53%), Gaps = 7/744 (0%)

Query: 71  QHLFQTKLV-SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           +++F   L+ S +     L  A  +F   P +    +  M++ +A      DA+S    M
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
             + V P     T +L + G          +H   I  G    +F    +++ Y K G +
Sbjct: 132 LGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
             A ++F  M ++D V++N ++ G ++ G    AL L   M   G      T  SIL   
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A +  L +G  VH   +R+     V V+ +L+D Y+KC  ++  R +FD M  R+ VS+N
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +IAAY         +R+F++M   G +   +     L     L D+  G  +H  L  L
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            L ++  + N+LI MYSKC  +D A   FS    K+ +SW A+I GY QNG+  EAL  F
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
             MR   ++PD  T  S+I A + L++I   + +H+ +IRS ++ +VF  + L+DMYAKC
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A   FD M ER+  +WN +I  Y  +G  K A+++F  ML     P+ +TFL  +
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +ACSH+GL +E + YF  +K  Y I P  +HY  ++D LGR G  ++    + +MP +  
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             ++ ++L +C+IH N EL   AA++LF ++P +   +V+L+NIYA A  W+  A V+ I
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNS 728
           M  +G++K  G S VE+K +++SF S     P    I   L+ L  E+   GY PD T +
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 726

Query: 729 IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
           +H V+  ++   L  HSE+LAIAF L+N+  G+ I I KNL  C DCH   K IS +  R
Sbjct: 727 LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 786

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           +IIVRD  RFH FK+GVCSCGDYW
Sbjct: 787 DIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 206/418 (49%), Gaps = 7/418 (1%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAA 92
           IP R+    + L L  CT    +  + P  IK GL D H+F    L+  +CK+  L+ A 
Sbjct: 137 IPDRVTV-TTVLNLPGCT----VPSLHPFAIKFGL-DTHVFVCNTLLDAYCKHGLLAAAR 190

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           RVF  + DK    Y+ M+ G +K      A+     MR   +    + ++ +L V   + 
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  G ++H  ++ +   L++F    +++ Y+KC  +++  ++FD MPERD VS+N I+A
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            +A N  A   L L   M + G     +   ++L    ++  + IGK +H   +  G  S
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLAS 370

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              +  AL+DMY+KCG ++ A+  F     ++ +SW ++I  YV+ G  EEA+++F  M 
Sbjct: 371 EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR 430

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             G+ P   T    + A + L  +  G  +H  L +    + V   + L+ MY+KC  +D
Sbjct: 431 RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLD 490

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
            A   F ++  +  +SWNA+I  YA  G    A+  F  M      PDS T +SV+ A
Sbjct: 491 EALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 233/530 (43%), Gaps = 50/530 (9%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF----- 214
           +  +++  GF +  + +   +      G +  A  MFD+MP +++ S N I++ +     
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 215 --------------------------AQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                                     A  G    AL L   M  EG   D +T+ ++L  
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL-- 147

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
             N+    +  ++H +A++ G D+ V V   L+D Y K G +  AR VF  M  ++ V++
Sbjct: 148 --NLPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N+M+    + G   +A+++F  M   G+  T+ T    L   A +  L  G  VH L+ +
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V + NSL+  YSKC  +D    +F ++  +  VS+N +I  YA N      L  
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +M+            +++     L  +   K IHA ++         +  ALIDMY+K
Sbjct: 325 FREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A++ F   +E+   +W  +I GY  +G  + A++LF+ M     +P+  TF   
Sbjct: 385 CGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 444

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           I A S   ++  G    + L +  G +  +     +VD+  + G L+EA     +MP   
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 609 GITVFGAMLGACKIHKNVELGE-KAANRLFE------LDPDEGGYHVLLA 651
            I+ + A++ A         GE K A ++FE       +PD   +  +LA
Sbjct: 504 SIS-WNAVISA-----YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 12/333 (3%)

Query: 42  PSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A +L V  SL ++   ++I   ++  GL  + L    L+ ++ K   L  A   F   
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +K    +  ++ GY +    ++A+     MR   + P    ++ ++K    +  I  G+
Sbjct: 399 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 458

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +G+   +F+ + +V+MYAKCG ++EA + FD MPER+ +SWN +++ +A  G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVS 277
            A+ A+ +   M   G   D +T +S+L A ++ G +    K  H    +          
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHY 578

Query: 278 TALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             ++D   + G     + +   M  + + + W S++ +    GN E A     K+   G+
Sbjct: 579 ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GM 636

Query: 337 EPTNVT---IMEALHACADLGDLERGIFVHKLL 366
           EPT+ T   I+  ++A A  G  E    V K++
Sbjct: 637 EPTDATPYVILSNIYARA--GQWEDAACVKKIM 667


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/767 (33%), Positives = 425/767 (55%), Gaps = 20/767 (2%)

Query: 63   IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLDALYHTMLKGYAKFASL 119
            I+  GL  + +  T L+S+F +   +  A  +FE + D   ++   ++ M+  YA     
Sbjct: 358  IVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCS 417

Query: 120  DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
             +A+  L  ++   V P    +   L  C  + +   G+ +H  +  +GF  ++     +
Sbjct: 418  KEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSVANAL 474

Query: 180  VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
            V MY KCG + ++ K+F  M E+DL SWN+ +A  + +G ++  + L+ +M  EG   + 
Sbjct: 475  VTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEK 534

Query: 240  ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
            +T ++ L +  +  SL+ G  +H   ++ G+++   V++A+++MY +CG ++ AR +F  
Sbjct: 535  VTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTR 594

Query: 300  MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLE 357
            +K+ +V+ W  M+  Y + G  ++ M  F+ ML +G++PT VT++  +   AD G     
Sbjct: 595  VKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFR 654

Query: 358  RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
             G+++  L  +  L ++  + NSLI M+S+ + + +A  IF +   K++     M+  Y 
Sbjct: 655  DGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYV 714

Query: 418  QNGRVNEA-LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            +  R  EA L  F +M  + ++P S T+V+ + A   L+    +K +H        E   
Sbjct: 715  KGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESET 774

Query: 477  FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
             V   L+DMY K G V TAR +FD    R+VTTWN M   Y   G+ +  + L   M   
Sbjct: 775  CVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRD 834

Query: 537  PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              +P+ +TF+  +S C HSGL+EE  + F ++++++GI+P   HY  ++DLL RAG L +
Sbjct: 835  GYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQ 894

Query: 597  AWDFIQKMPIEPGIT--VFGAMLGACK----IHKNVELGEKAANRLFELDP----DEGGY 646
            A DFI ++ +    +  ++ A+LGAC+             + A  + +++P    D    
Sbjct: 895  AEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAA 954

Query: 647  HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
            HV LANI AA+  WD+   +R  M +KGL+K PG SL+ +KN +H F +G   HP+ + I
Sbjct: 955  HVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEI 1014

Query: 707  YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
            Y  L  L   +   GYV DT  + H+V +  + +LL  HSEKLA+AFG+L++ PGS++ I
Sbjct: 1015 YAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRI 1074

Query: 766  RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             KNLR CGDCH A K IS + GREI+VRD +RFH F+NG CSCGDYW
Sbjct: 1075 IKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 296/616 (48%), Gaps = 25/616 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGL-------CDQHLFQTKLVSLFCKYNSLSDAAR 93
           A LL+ C  L +L   +R+   I +SGL                LV ++ K     +A R
Sbjct: 18  ARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQR 77

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
            F+ I  K    + ++L  Y        A+    +M    V P    Y  LLK CG +G+
Sbjct: 78  AFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGD 137

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTG-------VVNMYAKCGQIEEAYKMFDRMPERDLVS 206
           + +GK +H Q+  +G  LD    +G       +V MY KCG+ +EA + FD +  +++ S
Sbjct: 138 LAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFS 197

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           W +I+  +   G    AL+   +M + G   D +  ++ L     +  L  G  +H    
Sbjct: 198 WTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQ 257

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
               DS + +  ALV MY KCGR++ A+ +FD ++ RNV+SW  +++ + E G   E   
Sbjct: 258 DKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWG 317

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDL-ERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
           + + M  +G++P  V ++  L+ C+  G L E     H  +    L  +  +  +L+SM+
Sbjct: 318 LLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMF 377

Query: 386 SKCKKVDRAADIFSKL---QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           ++C +VD+A +IF K+     + +  WNAMI  YA  G   EAL     ++ + +KP+  
Sbjct: 378 ARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCI 437

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T +S   +L   S ++  + +H L+  S F++ V V  AL+ MY KCG++  +  LF  M
Sbjct: 438 TFIS---SLGACSSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEM 494

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
            E+ + +WN  I  +  HG     ++L ++M         +TFL A+++C+    +++G+
Sbjct: 495 AEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGV 554

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
                + +  G E       A++++ GR G L+ A +   ++     I   G +   C++
Sbjct: 555 LMHEKIVQ-CGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQL 613

Query: 623 HKNVELGEKAANRLFE 638
            +  ++ E   + L E
Sbjct: 614 GRTKQVMEHFRSMLHE 629



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 250/502 (49%), Gaps = 23/502 (4%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-------VVNMYAKCGQIEEA 192
           +Y  LLK CG +G++ +GK +H Q+  +G  LD    +G       +V MY KCG+ +EA
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            + FD +  +++ SW +I+  +   G    AL+   +M + G   D +    +L     +
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135

Query: 253 GSLRIGKAVHGYAMRAGF-------DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           G L  GK +H     +G             +   LV MY KCGR + A+  FD +  +N+
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNI 195

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
            SW S++ AY   G   +A+  F +M+  GVEP  +  + AL+ C  L  LE G  +H+ 
Sbjct: 196 FSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ 255

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +    L +D+ + N+L+SMY KC ++D A ++F  L+ + ++SW  ++  +A+NGR  E 
Sbjct: 256 IQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRET 315

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALID 484
                 M  + IKPD   +++++   +   V+    W+ H  ++    ++   V TAL+ 
Sbjct: 316 WGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLS 375

Query: 485 MYAKCGAVGTARALFDMMNERH---VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           M+A+CG V  AR +F+ + +     +  WN MI  Y   G  K A+ L + +     KPN
Sbjct: 376 MFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPN 435

Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
            ITF+ ++ ACS    +++G      L  + G +  +    A+V + G+ G L ++    
Sbjct: 436 CITFISSLGACSS---LQDG-RALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLF 491

Query: 602 QKMPIEPGITVFGAMLGACKIH 623
            +M  E  +  + + + A   H
Sbjct: 492 SEMA-EKDLASWNSAIAAHSYH 512



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 287/560 (51%), Gaps = 17/560 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS++ K   L  A  +F+ +  +    +  ++  +A+     +    L  M  + + P 
Sbjct: 271 LVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPD 330

Query: 138 VYNYTYLLKVCGDVGEIRRGKEI-HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
                 LL VC   G +     + H  ++  G   +    T +++M+A+CG++++A ++F
Sbjct: 331 KVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIF 390

Query: 197 DRMPERD---LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +++ +     +  WN ++  +A  G ++ AL L+  +  +G + + IT +S L A +   
Sbjct: 391 EKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS--- 447

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL+ G+A+H     +GFD  V+V+ ALV MY KCG +  +  +F  M  +++ SWNS IA
Sbjct: 448 SLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIA 507

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           A+   G  +E +++  +M  +G     VT + AL++C D   L+ G+ +H+ + Q     
Sbjct: 508 AHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEA 567

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  + +++I+MY +C  +DRA +IF++++   ++ W  M+  Y Q GR  + + +F  M 
Sbjct: 568 DTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSML 627

Query: 434 SKNIKPDSFTMVSVIPALAE--LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
            + +KP   T+V++I  +A+  L   R   WI +L   S  E    V  +LI+M+++  +
Sbjct: 628 HEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRS 687

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGK-AAVELFNKMLEGPTKPNDITFLCAIS 550
           +  ARA+FD   E+ V     M+  Y     GK AA+ LF +ML    +P+ +T + A+S
Sbjct: 688 LSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMS 747

Query: 551 ACSHSGLVE-EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           AC   GL +           ++ G+E        +VD+ G+AG ++ A  +I    +   
Sbjct: 748 AC--GGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTA-RYIFDRALRRN 804

Query: 610 ITVFGAMLGA---CKIHKNV 626
           +T + AM GA   C + + V
Sbjct: 805 VTTWNAMAGAYRQCGVTRGV 824



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 18/289 (6%)

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHK-------LLDQLKLGTDVSMTNSLISMYSK 387
           GV+    +    L  C  LGDL +G  +H        LLD  +      + N L+ MY K
Sbjct: 9   GVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGK 68

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C + D A   F  +  K + SW ++++ Y   G   +AL  F +M    ++PD      +
Sbjct: 69  CGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARL 128

Query: 448 IPALAELSVIRYAKWIHALVIRSCF-------EKNVFVMTALIDMYAKCGAVGTARALFD 500
           +     L  +   K +HA +  S             F+   L+ MY KCG    A+  FD
Sbjct: 129 LKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFD 188

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            +  +++ +W  ++  Y   GL   A+E F++M++   +P+ + FL A++ C     +E+
Sbjct: 189 SIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLED 248

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN---EAWDFIQKMPI 606
           G      + +D  ++  ++   A+V + G+ GRL+   E +D +++  +
Sbjct: 249 GAGIHRQI-QDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNV 296


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/657 (36%), Positives = 379/657 (57%), Gaps = 44/657 (6%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAK--CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           ++H  ++ +G   D +    ++  YA       + A K+F  +P  ++  WN ++ G  +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N     A+    RM  + R   F T  ++  A +   +++ G+ +HG+ ++ G  S V++
Sbjct: 111 NNKLFKAIYFYGRMVIDARPNKF-TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +A + MYA  GR+E AR +F   +S +VV WN+MI  Y++ G  E A  +F +M  + +
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
              NV I   L    +LGD                                      A  
Sbjct: 229 GSWNVMI-NGLAKGGNLGD--------------------------------------ARK 249

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F ++  +  +SW++M+ GY   GR  EAL  F +M+ +  +P  F + SV+ A + +  
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           I   +W+HA + R+  + +  + TAL+DMYAKCG +     +F+ M ER + TWN MI G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
              HG  + A+ELF+K+ EG  KPN IT +  ++AC+H+G V++G+  F ++++ YG++P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYG MVDLLGR+G  +EA D I  MP++P   V+GA+LGAC+IH N +L E+    L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EL+P   G +VLL+NIYA    +D ++K+R +M+ +G++  PG S+V+L   VH F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQ K IY  L+ + + ++ AG+ PDT+ +  D+++  +E  ++ HSEKLAIAFGL+
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           N+ PG  IHI KNLRVC DCH+ATK IS +  REIIVRD  R+H FKNG CSC D+W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 197/429 (45%), Gaps = 68/429 (15%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK--YNSLSDAARVFEPIPDKLDALYHT 108
           TSL+ L ++  L+++SG    H     L+  +    +++   A +VF  IP+    +++ 
Sbjct: 44  TSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNI 103

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++KG  +   L  A+ F  RM  D   P  + Y  L K C     ++ G++IHG ++ +G
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKM------------------------------FDR 198
              D+   +  + MYA  G++E+A KM                              F +
Sbjct: 163 IGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222

Query: 199 MPERDLVSWNTIVAGFAQNG--------FAEL-----------------------ALDLV 227
           MP +++ SWN ++ G A+ G        F E+                       AL++ 
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            +M  E  R     + S+L A +N+G++  G+ VH Y  R        + TAL+DMYAKC
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           GR++    VF+ MK R + +WN+MI      G  E+A+ +F K+ +  ++P  +T++  L
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGKT 405
            ACA  G +++G+ + + + +   G D  + +   ++ +  +      A D+ + +  K 
Sbjct: 403 TACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461

Query: 406 LVS-WNAMI 413
             + W A++
Sbjct: 462 NAAVWGALL 470



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 143/268 (53%), Gaps = 10/268 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++   K  +L DA ++F+ + ++ +  + +M+ GY       +A+    +M+ ++  P 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  C ++G I +G+ +H  L  N   LD    T +++MYAKCG+++  +++F+
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG---- 253
            M ER++ +WN ++ G A +G AE AL+L +++ E   + + IT+V +L A A+ G    
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMI 312
            LRI + +  +    G D  +     +VD+  + G    A  + + M  + N   W +++
Sbjct: 414 GLRIFQTMREF---YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALL 470

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            A    GN + A R+ + +L+  +EP N
Sbjct: 471 GACRIHGNFDLAERVGKILLE--LEPQN 496



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 435 KNIKPDSFTMVSVIPALAELSV--IRYAKWIHALVIRSCFEKNVFVMTALIDMYAK--CG 490
           KNI        +V+      S+  ++Y   +HALV+RS   ++ +V  AL+  YA     
Sbjct: 22  KNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFS 81

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
               A  +F  +   +V  WN++I G   +     A+  + +M+    +PN  T+     
Sbjct: 82  NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVI-DARPNKFTYPTLFK 140

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           ACS +  V+EG      + K +GI   +    A + +    GRL +A
Sbjct: 141 ACSVAQAVQEGRQIHGHVVK-HGIGSDVHIKSAGIQMYASFGRLEDA 186


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/646 (38%), Positives = 381/646 (58%), Gaps = 42/646 (6%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ +PE + + WN +  G A +     AL L   M   G   +F T   +L + A 
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD------------- 298
             + + G+ +HG+ ++ GFD  + V T+L+ MYA+ GR+E A+ VFD             
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 299 --GMKSR----------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
             G  SR                +VVSWN+MI+ Y E GN ++A+ +F++M+   V+P  
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   + ACA  G +E G  VH  ++    G+++ + N+LI +YSKC +V+ A ++   
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K ++SWN +I GY       EAL  F +M      P+  TM+S++PA A L  I   
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 461 KWIHALVIRSCFEKNVFVM------TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVM 513
           +WIH  + +    K V V       T+LIDMYAKCG +  A  + D     R ++TWN M
Sbjct: 328 RWIHVYIDKKL--KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I G+  HG   AA ++F++M +   +P+DITF+  +SACSHSG+++ G + F S+++DY 
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           I P ++HYG M+DLLG +G   EA + I  MP+EP   ++ ++L ACKIH N+ELGE  A
Sbjct: 446 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 505

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL-QKTPGCSLVELKNEVHS 692
            +L +++P+  G +VLL+NIYA A  W+++ K+RT++  KG+ +K PGCS +E+ + VH 
Sbjct: 506 KKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHE 565

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           F  G   HPQ++ IY  LE +   ++ AG+VPDT+ +  ++E+  +E  L  HSEKLAIA
Sbjct: 566 FIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 625

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
           FGL+++ PG+ + I KNLRVC +CH ATK IS +  REII RD  R
Sbjct: 626 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/554 (29%), Positives = 274/554 (49%), Gaps = 83/554 (14%)

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ L  A  VFE IP+    +++ M +G+A  +    A+   + M    + P  + + +L
Sbjct: 22  FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR------ 198
           LK C      + G++IHG ++  GF LDL+  T +++MYA+ G++E+A K+FDR      
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141

Query: 199 -------------------------MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
                                    +P +D+VSWN +++G+A+ G  + AL+L   M + 
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
             + D  T+ +++ A A  GS+ +G+ VH +    GF S + +  AL+D+Y+KCG VETA
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             + +G+ +++V+SWN++I  Y      +EA+ +FQ+ML  G  P +VT++  L ACA L
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321

Query: 354 GDLERGIFVHKLLDQLKLGTDV----SMTNSLISMYSKCKKVDRAADIF-SKLQGKTLVS 408
           G ++ G ++H  +D+   G  V    S+  SLI MY+KC  +D A  +  S    ++L +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WNAMI G+A +GR N A + F +MR   I+PD  T V ++ A +                
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH--------------- 426

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLG 523
                                G +   R +F  M + +  T     +  MID  G  GL 
Sbjct: 427 --------------------SGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLF 466

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYG 582
           K A E+ N M   P +P+ + +   + AC   G +E G  +   L K   IEP     Y 
Sbjct: 467 KEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK---IEPENPGSYV 520

Query: 583 AMVDLLGRAGRLNE 596
            + ++   AG+ NE
Sbjct: 521 LLSNIYATAGKWNE 534



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 159/293 (54%), Gaps = 7/293 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++ +     +  A ++F+ IP K    ++ M+ GYA+  +   A+     M   +V 
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       ++  C   G I  G+++H  +  +GF  +L  +  ++++Y+KCG++E A ++
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
            + +  +D++SWNT++ G+      + AL L   M   G   + +T++SILPA A++G++
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 256 RIGKAVHGYAMRAGFDSIV----NVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNS 310
            IG+ +H Y  +     +V    ++ T+L+DMYAKCG ++ A  V D    +R++ +WN+
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG--DLERGIF 361
           MI  +   G    A  IF +M   G+EP ++T +  L AC+  G  DL R IF
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIF 437


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/707 (35%), Positives = 392/707 (55%), Gaps = 75/707 (10%)

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           T +V   A  G++ +A   FD +P   RD V  N +++ FA+   A  A+ +   +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 235 R-RGDFITIVSILPAVANVGSLRIG--KAVHGYAMRAGFDSIVNVSTALVDMYAKC---- 287
             R D  +  +++ AV  + +L       +H   +++G  ++++VS AL+ +Y KC    
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 288 ------------------------------GRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                         G V  AR VF+ +  +  V WN+MI+ YV+
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG----T 373
            G   +A  +F++M+ + V     T    L ACA+ G    G  VH  + +L+       
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA---------------------- 411
            + + N+L+++YSK  K+  A  IF  +  K +VSWN                       
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 412 ---------MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
                    M+ GY   G   +AL  F +MR++++KP  +T    I A  EL  +++ + 
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA +++  FE +     AL+ MYAKCGAV  AR +F +M      +WN MI   G HG 
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           G+ A+ELF++M+     P+ I+FL  ++AC+H+GLV+EG HYF S+K+D+GI P  DHY 
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            ++DLLGR+GR+ EA D I+ MP EP  +++ A+L  C+ + ++E G  AA++LF + P 
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G ++LL+N Y+AA  W   A+VR +M  +G++K PGCS +E+ +++H F  G TKHP+
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           ++ +Y FLE +   ++  GYVPDT  + HD+E + +E +L +HSEKLA+ FGLL   PG+
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGA 755

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           T+ + KNLR+CGDCH A  ++S   GREI+VRD+ RFH FK+G CSC
Sbjct: 756 TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/747 (35%), Positives = 402/747 (53%), Gaps = 91/747 (12%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           ++ +ML+ Y+        V     M+   V P  + Y  L+K  G+      G   H  +
Sbjct: 67  VFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHAHV 121

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQ---NGF 219
           +  G   D F    V++MYA+ G I  A K+FD +P  ER +  WN +V+G+ +    G 
Sbjct: 122 LKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQ 181

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           A+   D                   ++P                       +  V   TA
Sbjct: 182 AQWLFD-------------------VMP-----------------------ERNVITWTA 199

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           +V  YAK   +E AR  FD M  R+VVSWN+M++ Y + G  EE +R+F +M++ G+EP 
Sbjct: 200 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPD 259

Query: 340 NVTIMEALHACADLGD---------------LERGIFVH-----------------KLLD 367
             T +  + AC+  GD               ++   FV                  ++ D
Sbjct: 260 ETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFD 319

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +L    +    N++IS Y++   +D A ++F+ + G+ +V+WN+MI GYAQNG+   A+ 
Sbjct: 320 ELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 379

Query: 428 YFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
            F +M  +K + PD  TMVSVI A   L  +    W+   +  +  + ++    A+I MY
Sbjct: 380 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 439

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           ++CG++  A+ +F  M  R V ++N +I G+  HG G  A+ L + M EG  +P+ +TF+
Sbjct: 440 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 499

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             ++ACSH+GL+EEG   F S+K     +P +DHY  MVDLLGR G L +A   +++MP+
Sbjct: 500 GVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPM 554

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP   V+G++L A +IHK VELGE AAN+LFEL+PD  G  +LL+NIYA+A  W  + ++
Sbjct: 555 EPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERI 614

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R  M+K G++KT G S VE   ++H F      H +S  IY  L  L  +++ AGY+ D 
Sbjct: 615 REAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 674

Query: 727 NSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
           + +  DVE+  +E ++ +HSEKLAI + LL S  G+ I + KNLRVC DCH A K IS +
Sbjct: 675 SCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKL 734

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GR IIVRD +RFHCF +G+CSC DYW
Sbjct: 735 EGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 235/531 (44%), Gaps = 86/531 (16%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD--KLDALYHTMLKGYAKFASLD 120
           ++K G       +  ++ ++ +   +  A +VF+ IPD  +  A ++ M+ GY K+ S  
Sbjct: 121 VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEG 180

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            A          DV P                                   ++   T +V
Sbjct: 181 QAQWLF------DVMP---------------------------------ERNVITWTAMV 201

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
             YAK   +E A + FD MPER +VSWN +++G+AQNG AE  L L   M   G   D  
Sbjct: 202 TGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDET 261

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD-- 298
           T V+++ A ++ G   +  ++     +        V TAL+DMYAKCG +  AR +FD  
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL 321

Query: 299 ------------------------------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                                          M  RNVV+WNSMIA Y + G    A+ +F
Sbjct: 322 GAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381

Query: 329 QKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           ++M+  + + P  VT++  + AC  LG LE G +V + L + ++   +S  N++I MYS+
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 441

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  ++ A  +F ++  + +VS+N +I G+A +G   EA+N    M+   I+PD  T + V
Sbjct: 442 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 501

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERH 506
           + A +   ++   +     V  S  +  +     ++D+  + G +  A R +  M  E H
Sbjct: 502 LTACSHAGLLEEGR----KVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPH 557

Query: 507 VTTWNVMIDGYGTHG---LGKAAVELFNKMLE-GPTKPNDITFLCAISACS 553
              +  +++    H    LG+ A    NK+ E  P    +   L  I A +
Sbjct: 558 AGVYGSLLNASRIHKQVELGELAA---NKLFELEPDNSGNFILLSNIYASA 605



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 168/411 (40%), Gaps = 111/411 (27%)

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
           L+F+   + NV  + SM+  Y    +  + + +F+ M   GV P +  +   L   A  G
Sbjct: 55  LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRP-DAFVYPILIKSAGNG 113

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG----------- 403
               GI  H  + +L  G+D  + N++I MY++   +  A  +F ++             
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 404 ----------------------KTLVSWNAMILGYAQNGRVNEALNYF-C---------- 430
                                 + +++W AM+ GYA+   +  A  YF C          
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229

Query: 431 --------------------KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
                               +M +  I+PD  T V+VI A +     R    + A ++R+
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSS----RGDPCLAASLVRT 285

Query: 471 CFEK----NVFVMTALIDMYAKCGAVGTARALFD-------------------------- 500
             +K    N FV TAL+DMYAKCG++G AR +FD                          
Sbjct: 286 LHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDS 345

Query: 501 ------MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACS 553
                  M  R+V TWN MI GY  +G    A+ELF +M+      P+++T +  ISAC 
Sbjct: 346 ARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 405

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           H G +E G ++      +  I+  +  + AM+ +  R G + +A    Q+M
Sbjct: 406 HLGALELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/776 (34%), Positives = 424/776 (54%), Gaps = 32/776 (4%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK----------LDALY 106
           R++  L  K GL         LVS++ +   + DA +VF  IPD           + AL 
Sbjct: 88  RQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS 147

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
               +G   F     AV  ++     D A +V     +L +C  +G    G+ +HG    
Sbjct: 148 GDPRRGLELFRDCLVAVGGMV-----DEATLVT----VLPMCAALGWSETGRAVHGLAAK 198

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +G+         +V+MYAKCG++ +A + F   P   +VSWN ++  + +N  A  A  L
Sbjct: 199 SGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGL 256

Query: 227 VTRMH--EEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN-VSTALVD 282
           +  M   E G    D IT++S+LPA +    L   + +H + +R G D+  + V  ALV 
Sbjct: 257 LRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVA 316

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNV 341
            Y +CGR+  A  VF  ++ + V SWN++I+A+ +  N   A+ +F +M +  G++P   
Sbjct: 317 AYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQ-NTAAAIELFIQMTNACGLKPDGF 375

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI-FSK 400
           +I   L ACAD   L      H  + +  L  D  +  SL+S Y +C + +  A + F  
Sbjct: 376 SIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDA 435

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS-FTMVSVIPALAELSVIRY 459
           ++ K  V W AMI GY+QNG   E+L  F +M+S      S  +  S + A +ELS +R 
Sbjct: 436 MEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRL 495

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV-TTWNVMIDGYG 518
            K +H   +++    + F+ ++LIDMY+KCG V  AR  FD +  R    +W  MI GY 
Sbjct: 496 GKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYA 555

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY-GIEPV 577
            +GLG+ AVEL+ KM     +P++ T+L  + AC H+G++EEG+ +F  ++  +  IE  
Sbjct: 556 VNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVK 615

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HY  ++ +L RAGR  +A   + +MP EP   +  ++L AC IH   ELG   A RL 
Sbjct: 616 LEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLL 675

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           EL+PD+  ++VL +N+YA +  WD + KVR ++   G+ K PGCS +++  +V+SF +G 
Sbjct: 676 ELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGE 735

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLS-SHSEKLAIAFGLLN 756
             HP+ +++     +L + I+  GYVPDT  +    +  ++      HSEK A+ FGLL 
Sbjct: 736 NPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLR 795

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++  +T+ + KN+R+C DCHNA + IS VTGR+I+VRD  RFH F+ G+CSCGDYW
Sbjct: 796 TATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 275/543 (50%), Gaps = 40/543 (7%)

Query: 132 DDVAPVVYNYTYLLKVCG--DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           + +AP  +      + CG   VG    G+++H      G   D F    +V+MY +CG++
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 190 EEAYKMFDRMPE--RDLVSWNTIVA---GFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           E+A K+F  +P+  R++VSWN ++A   G  + G  EL  D +  +   G   D  T+V+
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAALSGDPRRGL-ELFRDCLVAV---GGMVDEATLVT 175

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +LP  A +G    G+AVHG A ++G+D+   V  ALVDMYAKCG +  A   F   ++ +
Sbjct: 176 VLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFP--EAPS 233

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTN-VTIMEALHACADLGDLERGIF 361
           VVSWN M+ AY        A  + + M   + G  P + +T++  L AC+   +L R   
Sbjct: 234 VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE 293

Query: 362 VHKLLDQLKLGTDVS---MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           +H     ++ G D +   + N+L++ Y +C ++  A  +F+ ++ KT+ SWN +I  +AQ
Sbjct: 294 LHAF--TVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ 351

Query: 419 NGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
                 A+  F +M +   +KPD F++ S++ A A+   + + K  H  ++R+  E++  
Sbjct: 352 QN-TAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTV 410

Query: 478 VMTALIDMYAKCGAVG-TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM--L 534
           +  +L+  Y +C      AR LFD M E+    W  MI GY  +GL   +++LF +M  +
Sbjct: 411 IRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSV 470

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           EG    + I+   A+ ACS    V  G  +H F +LK D   +P +    +++D+  + G
Sbjct: 471 EGHCS-SVISATSALMACSELSSVRLGKEMHCF-ALKADLCDDPFLS--SSLIDMYSKCG 526

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN-----RLFELDPDEGGYH 647
            + +A  F  ++        + AM+    ++    LG +A       R   ++PDE  Y 
Sbjct: 527 FVEDARTFFDRLKARDAKVSWTAMITGYAVNG---LGREAVELYGKMRREGMEPDEFTYL 583

Query: 648 VLL 650
            LL
Sbjct: 584 GLL 586



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 174/362 (48%), Gaps = 23/362 (6%)

Query: 207 WNTIVAGFAQNG--FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA---- 260
           WN ++A  ++ G     LAL        EG   D  T+    PA  + G LR+G A    
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLP---PAARSCGFLRVGAAAAGR 88

Query: 261 -VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVE 317
            VH  A + G      V  +LV MY +CGRVE A  VF G+   +RN+VSWN+++AA   
Sbjct: 89  QVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL-- 146

Query: 318 GGNPEEAMRIFQK-MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
            G+P   + +F+  ++  G      T++  L  CA LG  E G  VH L  +        
Sbjct: 147 SGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPAR 206

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK- 435
           + N+L+ MY+KC ++  A   F   +  ++VSWN M+  Y +N     A      M+ K 
Sbjct: 207 VGNALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKE 264

Query: 436 --NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE-KNVFVMTALIDMYAKCGAV 492
             ++  D  T++SV+PA +  + +   + +HA  +R   +  +  V  AL+  Y +CG +
Sbjct: 265 HGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRL 324

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG-PTKPNDITFLCAISA 551
             A  +F  +  + V++WN +I  +       AA+ELF +M      KP+  +    + A
Sbjct: 325 LHADRVFTDIRRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFSIGSLLMA 383

Query: 552 CS 553
           C+
Sbjct: 384 CA 385


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/652 (39%), Positives = 382/652 (58%), Gaps = 14/652 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   ++N YAK   I  A ++FD +P+ D+VS+NT++A +A  G    AL L   + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 232 EEGRRGDFITIVSILPAVAN-VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           E     D  T+  ++ A  + VG +R    +H + +  G+D   +V+ A++  Y++ G +
Sbjct: 134 ELRFGLDGFTLSGVIIACGDDVGLVR---QLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190

Query: 291 ETARLVFDGMKS---RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
             AR VF  M     R+ VSWN+MI A  +     EA+ +F++M+ +G++    T+   L
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK-VDRAADIFSKLQGKTL 406
            A   + DL  G+  H ++ +     +  + + LI +YSKC   +     +F ++    L
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310

Query: 407 VSWNAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           V WN MI G++Q   ++E  +  F +M+     PD  + V V  A + LS     K +HA
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 466 LVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           L I+S    N V V  AL+ MY+KCG V  AR +FD M E ++ + N MI GY  HG+  
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            ++ LF  ML+    PN ITF+  +SAC H+G VEEG  YF  +K+ + IEP  +HY  M
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           +DLLGRAG+L EA   I+ MP  PG   +  +LGAC+ H NVEL  KAAN   +L+P   
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +V+L+N+YA+A+ W++ A V+ +M ++G++K PGCS +E+  +VH F +  T HP  K
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 705 RIYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            I+ ++  ++ ++K AGYVPD         +VE   +E  L  HSEKLA+AFGL+++   
Sbjct: 611 EIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEW 670

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLR+CGDCHNA K IS +TGREI VRD HRFHCFK G CSCGDYW
Sbjct: 671 VPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 244/520 (46%), Gaps = 17/520 (3%)

Query: 26  HTLSQRAYIPSRIY-RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           H L  ++ IP   Y  +   LL   C SL   +    L     +         L++ + K
Sbjct: 32  HALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNV----FSYNTLINAYAK 87

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ +  A +VF+ IP      Y+T++  YA       A+     +R        +  + +
Sbjct: 88  HSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGV 147

Query: 145 LKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-- 201
           +  CG DVG +R   ++H  ++V G+         V+  Y++ G + EA ++F  M E  
Sbjct: 148 IIACGDDVGLVR---QLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGG 204

Query: 202 -RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD VSWN ++    Q+     A++L   M   G + D  T+ S+L A   V  L  G  
Sbjct: 205 GRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQ 264

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            HG  +++GF    +V + L+D+Y+KC G +   R VF+ + + ++V WN+MI+ + +  
Sbjct: 265 FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYE 324

Query: 320 N-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSM 377
           +  E+ +  F++M   G  P + + +    AC++L     G  VH L  +  +  + VS+
Sbjct: 325 DLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSV 384

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L++MYSKC  V  A  +F  +    +VS N+MI GYAQ+G   E+L  F  M  K+I
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDI 444

Query: 438 KPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            P++ T ++V+ A      +    K+ + +  R   E      + +ID+  + G +  A 
Sbjct: 445 APNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAE 504

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            + + M        W  ++     HG  + AV+  N+ L+
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQ 544



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 199/403 (49%), Gaps = 20/403 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPD---KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +++ + +   L++A RVF  + +   + +  ++ M+    +     +AV     M    +
Sbjct: 180 VLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGL 239

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAY 193
              ++    +L     V ++  G + HG +I +GF  +    +G++++Y+KC G + E  
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECR 299

Query: 194 KMFDRMPERDLVSWNTIVAGFAQ-NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           K+F+ +   DLV WNT+++GF+Q    +E  +     M   G   D  + V +  A +N+
Sbjct: 300 KVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNL 359

Query: 253 GSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
            S  +GK VH  A+++    + V+V+ ALV MY+KCG V  AR VFD M   N+VS NSM
Sbjct: 360 SSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSM 419

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLK 370
           IA Y + G   E++R+F+ ML + + P  +T +  L AC   G +E G  + + + ++ +
Sbjct: 420 IAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFR 479

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVN---EAL 426
           +  +    + +I +  +  K+  A  I   +      + W  ++    ++G V    +A 
Sbjct: 480 IEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAA 539

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N F ++   N  P  + M+S + A A       A+W  A  ++
Sbjct: 540 NEFLQLEPYNAAP--YVMLSNMYASA-------ARWEEAATVK 573



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 205/485 (42%), Gaps = 79/485 (16%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR----------- 289
           T  ++L A      L  GK +H    ++       +S     +Y+KCG            
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 290 --------------------VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
                               +  AR VFD +   ++VS+N++IAAY + G    A+R+F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           ++ +        T+   + AC D   L R +  H  +         S+ N++++ YS+  
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQL--HCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 390 KVDRAADIFSKL---QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
            ++ A  +F ++    G+  VSWNAMI+   Q+    EA+  F +M  + +K D FTM S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC-GAVGTARALFDMMNER 505
           V+ A   +  +      H ++I+S F  N  V + LID+Y+KC G +   R +F+ +   
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 506 HVTTWNVMIDGYGTH-GLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGI 562
            +  WN MI G+  +  L +  +  F +M      P+D +F+C  SACS+  S  V + +
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP----------------- 605
           H   ++K D     V  +  A+V +  + G +++A      MP                 
Sbjct: 369 HAL-AIKSDIPYNRVSVN-NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQH 426

Query: 606 -----------------IEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGG 645
                            I P    F A+L AC     VE G+K  N +   F ++P+   
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEH 486

Query: 646 YHVLL 650
           Y  ++
Sbjct: 487 YSCMI 491


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/681 (38%), Positives = 374/681 (54%), Gaps = 45/681 (6%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIV---NGFSLDLFAMTGVVNMYAKCGQIEEAYKMF---- 196
           LL  C     +   +  H +L+V           A   ++  YA C  +  A+ +     
Sbjct: 18  LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSS 77

Query: 197 -DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR--GDFITIVSILPAVANVG 253
            D       V +N ++     +     AL L   M   G     D  T    L + +   
Sbjct: 78  PDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASK 137

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L +G  +H    +   D  V V+ + + MY++CGR E A  VFDGM  R+VVSWN+MIA
Sbjct: 138 DLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIA 197

Query: 314 AYVEGGNPEEAMRIFQK-MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            +   G  + A+ +F++ ++ QG  P   T+   L A  +                    
Sbjct: 198 GFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN-------------------- 237

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                        +K   +     +F  +Q K L+SWNAM+  YA N    +A+  F  M
Sbjct: 238 -------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLM 284

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
               ++PDS T+ +V+P   ELS     K IH ++ R     N+ +  AL+DMYA CG +
Sbjct: 285 EKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCL 344

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             AR +FD+M+ R V +W  +I  YG HG G+ AV+LF KML    +P+ I F+  ++AC
Sbjct: 345 KDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAAC 404

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GL+ +G HYF S+   Y I P  +HY  MVDLLGRAG +NEA+DFI  M IEP   V
Sbjct: 405 SHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERV 464

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA+L AC+IH N+++G  AA+ LF L P++ GY+VLL+N+YA A  W  +  VR++M  
Sbjct: 465 WGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVN 524

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHD 731
           KG++K PG S+VEL ++VH+F+ G   HPQS+ IY  L+ L+ +I+  GY P+   ++HD
Sbjct: 525 KGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHD 584

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           VE+  +E+ LS HSEKLAIAF LLN+SPG+ I +  NLR C DCH A K IS++T REI+
Sbjct: 585 VEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIV 644

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           ++D +R H    GVCSCGDYW
Sbjct: 645 LKDTNRIHHIVQGVCSCGDYW 665



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 223/495 (45%), Gaps = 57/495 (11%)

Query: 46  LLEVCTS---LKELR----RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           LL  C +   L  LR    R+L L+  S     H    KL+  +   ++L  A  V E  
Sbjct: 18  LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHA-NVKLIQAYAACSALPLAHTVLESS 76

Query: 99  -PD----KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--PVVYNYTYLLKVCGDV 151
            PD         ++ +++     +   DA+     MR    A  P  Y Y   LK C   
Sbjct: 77  SPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSAS 136

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
            ++  G +IH  +       +++     ++MY++CG+ E+AY++FD MP RD+VSWN ++
Sbjct: 137 KDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMI 196

Query: 212 AGFAQNGFAELALDLVTR-MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           AGFA+ G  + A+++  + +  +G   D  T+  ILPA+ N                   
Sbjct: 197 AGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN------------------- 237

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
                         AK   +   R VFD M+ + ++SWN+M+A Y       +A+ +F  
Sbjct: 238 --------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFML 283

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M    VEP ++T+   L  C +L     G  +H+++ +  +  ++ + N+L+ MY+ C  
Sbjct: 284 MEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGC 343

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +  A +IF  +  + ++SW ++I  Y ++G   EA++ F KM  + ++PDS   V+V+ A
Sbjct: 344 LKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAA 403

Query: 451 LAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM----NER 505
            +   ++   K +  ++  R          T ++D+  + G +  A      M    NER
Sbjct: 404 CSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNER 463

Query: 506 HVTTWNVMIDGYGTH 520
               W  ++     H
Sbjct: 464 ---VWGALLQACRIH 475



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 47/329 (14%)

Query: 39  YRHPSALLLEVCTSLKELRRILPLIIKSGLC----DQHLFQT-KLVSLFCKYNSLSDAAR 93
           Y +P  L L+ C++ K+L  +L L I S +     D++++     +S++ +     DA R
Sbjct: 124 YTYP--LALKSCSASKDL--LLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYR 179

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           VF+ +P +    ++ M+ G+A+                                   VG 
Sbjct: 180 VFDGMPHRDVVSWNAMIAGFAR-----------------------------------VGL 204

Query: 154 IRRGKEIHGQLIV-NGFSLDLFAMTGVVNMY--AKCGQIEEAYKMFDRMPERDLVSWNTI 210
             R  E+  Q +V  G   D   M G++     AK   I    ++FD M  ++L+SWN +
Sbjct: 205 FDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAM 264

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +A +A N F   A++L   M ++    D IT+ ++LP    + +  +GK +H    R   
Sbjct: 265 LAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNM 324

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
              + +  AL+DMYA CG ++ AR +FD M +R+V+SW S+I+AY + G+  EA+ +F+K
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEK 384

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERG 359
           ML QG+EP ++  +  L AC+  G L  G
Sbjct: 385 MLGQGLEPDSIAFVAVLAACSHAGLLADG 413



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 4/160 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C  L      +RI  +I +  +C   L +  L+ ++     L DA  +F+ +  
Sbjct: 297 ATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSA 356

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    + +++  Y K     +AV    +M    + P    +  +L  C   G +  GK  
Sbjct: 357 RDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHY 416

Query: 161 HGQLIVNGFSLDLFA-MTGVVNMYAKCGQIEEAYKMFDRM 199
              +      +      T +V++  + G I EAY     M
Sbjct: 417 FDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTM 456


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/744 (35%), Positives = 399/744 (53%), Gaps = 7/744 (0%)

Query: 71  QHLFQTKLV-SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           +++F   L+ S +     L  A  +F   P +    +  M++ +A      DA+S    M
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
             + V P     T +L + G          +H   I  G    +F    +++ Y K G +
Sbjct: 132 LGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
             A ++F  M ++D V++N ++ G ++ G    AL L   M   G      T  SIL   
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A +  L +G  VH   +R+     V V+ +L+D Y+KC  ++  R +FD M  R+ VS+N
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYN 306

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            +IAAY         +R+F++M   G +   +     L     L D+  G  +H  L  L
Sbjct: 307 VIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            L ++  + N+LI MYSKC  +D A   FS    K+ +SW A+I GY QNG+  EAL  F
Sbjct: 367 GLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLF 426

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
             MR   ++PD  T  S+I A + L++I   + +H+ +IRS ++ +VF  + L+DMYAKC
Sbjct: 427 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A   FD M ER+  +WN +I  Y  +G  K A+++F  ML     P+ +TFL  +
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +ACSH+GL +E + YF  +K  Y I P  +HY  ++D LGR G  ++    + +MP +  
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
             ++ ++L +C+IH N EL   AA++LF ++P +   +V+L+NIYA A  W+  A V+ I
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNS 728
           M  +G++K  G S VE+K +++SF S     P    I   L+ L  E+   GY PD T +
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 726

Query: 729 IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
           +H V+  ++   L  HSE+LAIAF L+N+  G+ I I KNL  C DCH   K IS +  R
Sbjct: 727 LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 786

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
           +IIVRD  RFH FK+GVCSCGDYW
Sbjct: 787 DIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 206/418 (49%), Gaps = 7/418 (1%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAA 92
           IP R+    + L L  CT    +  + P  IK GL D H+F    L+  +CK+  L+ A 
Sbjct: 137 IPDRVTV-TTVLNLPGCT----VPSLHPFAIKFGL-DTHVFVCNTLLDAYCKHGLLAAAR 190

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           RVF  + DK    Y+ M+ G +K      A+     MR   +    + ++ +L V   + 
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  G ++H  ++ +   L++F    +++ Y+KC  +++  ++FD MPERD VS+N I+A
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            +A N  A   L L   M + G     +   ++L    ++  + IGK +H   +  G  S
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLAS 370

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              +  AL+DMY+KCG ++ A+  F     ++ +SW ++I  YV+ G  EEA+++F  M 
Sbjct: 371 EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR 430

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
             G+ P   T    + A + L  +  G  +H  L +    + V   + L+ MY+KC  +D
Sbjct: 431 RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLD 490

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
            A   F ++  +  +SWNA+I  YA  G    A+  F  M      PDS T +SV+ A
Sbjct: 491 EALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 233/530 (43%), Gaps = 50/530 (9%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF----- 214
           +  +++  GF +  + +   +      G +  A  MFD+MP +++ S N I++ +     
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 215 --------------------------AQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                                     A  G    AL L   M  EG   D +T+ ++L  
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL-- 147

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
             N+    +  ++H +A++ G D+ V V   L+D Y K G +  AR VF  M  ++ V++
Sbjct: 148 --NLPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N+M+    + G   +A+++F  M   G+  T+ T    L   A +  L  G  VH L+ +
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
                +V + NSL+  YSKC  +D    +F ++  +  VS+N +I  YA N      L  
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +M+            +++     L  +   K IHA ++         +  ALIDMY+K
Sbjct: 325 FREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A++ F   +E+   +W  +I GY  +G  + A++LF+ M     +P+  TF   
Sbjct: 385 CGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 444

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           I A S   ++  G    + L +  G +  +     +VD+  + G L+EA     +MP   
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 609 GITVFGAMLGACKIHKNVELGE-KAANRLFE------LDPDEGGYHVLLA 651
            I+ + A++ A         GE K A ++FE       +PD   +  +LA
Sbjct: 504 SIS-WNAVISA-----YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 12/333 (3%)

Query: 42  PSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A +L V  SL ++   ++I   ++  GL  + L    L+ ++ K   L  A   F   
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +K    +  ++ GY +    ++A+     MR   + P    ++ ++K    +  I  G+
Sbjct: 399 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 458

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +G+   +F+ + +V+MYAKCG ++EA + FD MPER+ +SWN +++ +A  G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVS 277
            A+ A+ +   M   G   D +T +S+L A ++ G +    K  H    +          
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHY 578

Query: 278 TALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             ++D   + G     + +   M  + + + W S++ +    GN E A     K+   G+
Sbjct: 579 ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GM 636

Query: 337 EPTNVT---IMEALHACADLGDLERGIFVHKLL 366
           EPT+ T   I+  ++A A  G  E    V K++
Sbjct: 637 EPTDATPYVILSNIYARA--GQWEDAACVKKIM 667


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/577 (41%), Positives = 348/577 (60%), Gaps = 12/577 (2%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC------GRVETARLVF 297
           SIL  +    SLR  K +  Y ++       N  T L  +   C        ++ A  +F
Sbjct: 37  SILSLIPKCTSLRELKQIQAYTIKTH----QNNPTVLTKLINFCTSNPTIASMDHAHRMF 92

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D +   ++V +N+M   Y    +P  A+ +  ++L  G+ P + T    L ACA L  LE
Sbjct: 93  DKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALE 152

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H L  +L +G ++ +  +LI+MY+ C  VD A  +F K+    +V++NA+I   A
Sbjct: 153 EGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCA 212

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           +N R NEAL  F +++   +KP   TM+  + + A L  +   +WIH  V ++ F++ V 
Sbjct: 213 RNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVK 272

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V TALIDMYAKCG++  A ++F  M  R    W+ MI  Y THG G  A+ +  +M +  
Sbjct: 273 VNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAK 332

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +P++ITFL  + ACSH+GLVEEG  YF S+  +YGI P + HYG M+DLLGRAGRL EA
Sbjct: 333 VQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEA 392

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
             FI ++PI+P   ++  +L +C  H NVE+ +    R+FELD   GG +V+L+N+ A  
Sbjct: 393 CKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARN 452

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             WD +  +R +M  KG  K PGCS +E+ N VH F+SG   H  S  ++  L+ L+ E+
Sbjct: 453 GRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKEL 512

Query: 718 KAAGYVPDTNSIH--DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           K AGYVPDT+ +   D+ED  +E +L  HSEKLAI +GLLN+ PG+TI + KNLRVC DC
Sbjct: 513 KLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDC 572

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           HNA K+ISL+ GR+II+RD+ RFH FK+G CSCGDYW
Sbjct: 573 HNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 209/393 (53%), Gaps = 11/393 (2%)

Query: 42  PSALLLEV---CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN----SLSDAARV 94
           PS+ +L +   CTSL+EL++I    IK+   +  +  TKL++ FC  N    S+  A R+
Sbjct: 34  PSSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVL-TKLIN-FCTSNPTIASMDHAHRM 91

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F+ IP     L++TM +GYA+F     A+    ++    + P  Y ++ LLK C  +  +
Sbjct: 92  FDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKAL 151

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             GK++H   +  G   +++    ++NMY  C  ++ A ++FD++ E  +V++N I+   
Sbjct: 152 EEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSC 211

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           A+N     AL L   + E G +   +T++  L + A +G+L +G+ +H Y  + GFD  V
Sbjct: 212 ARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYV 271

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V+TAL+DMYAKCG ++ A  VF  M  R+  +W++MI AY   G+  +A+ + ++M   
Sbjct: 272 KVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKA 331

Query: 335 GVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            V+P  +T +  L+AC+  G +E G  + H +  +  +   +     +I +  +  +++ 
Sbjct: 332 KVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEE 391

Query: 394 AADIFSKLQGK-TLVSWNAMILGYAQNGRVNEA 425
           A     +L  K T + W  ++   + +G V  A
Sbjct: 392 ACKFIDELPIKPTPILWRTLLSSCSSHGNVEMA 424



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 214/427 (50%), Gaps = 44/427 (10%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
             ++ A++MFD++P+ D+V +NT+  G+A+      A+ L +++   G   D  T  S+L
Sbjct: 83  ASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLL 142

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A + +L  GK +H  A++ G    + V   L++MY  C  V+ AR VFD +    VV
Sbjct: 143 KACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV 202

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           ++N++I +      P EA+ +F+++ + G++PT+VT++ AL +CA LG L+ G ++H+ +
Sbjct: 203 AYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYV 262

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +      V +  +LI MY+KC  +D A  +F  +  +   +W+AMI+ YA +G  ++A+
Sbjct: 263 KKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAI 322

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDM 485
           +   +M+   ++PD  T + ++ A +   ++    ++ H+                   M
Sbjct: 323 SMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHS-------------------M 363

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
             + G V +            +  +  MID  G  G  + A +  +++   P KP  I +
Sbjct: 364 THEYGIVPS------------IKHYGCMIDLLGRAGRLEEACKFIDEL---PIKPTPILW 408

Query: 546 LCAISACSHSGLVEEG---IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
              +S+CS  G VE     I     L   +G +     Y  + +L  R GR ++  + ++
Sbjct: 409 RTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGD-----YVILSNLCARNGRWDDV-NHLR 462

Query: 603 KMPIEPG 609
           KM ++ G
Sbjct: 463 KMMVDKG 469


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 226/576 (39%), Positives = 365/576 (63%), Gaps = 2/576 (0%)

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
           +  + S++ A+++  S+    A+H   +++   S   +   LV MY K G  E A+ +FD
Sbjct: 62  YSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFD 121

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLE 357
            M ++++VSWNS+++     G     +  F +M  + G +P  VT++  + ACAD+G L+
Sbjct: 122 EMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALD 181

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H ++ +L +     + NSLI+MY K   +D A+ +F ++  ++LVSWN+M++ + 
Sbjct: 182 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 241

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            NG   + ++ F  M+   I PD  TMV+++ A  +  + R A+ IHA + R  F  ++ 
Sbjct: 242 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 301

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           + TAL+++YAK G +  +  +F+ + +R    W  M+ GY  H  G+ A++LF+ M++  
Sbjct: 302 IATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 361

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            + + +TF   +SACSHSGLVEEG  YF  + + Y +EP +DHY  MVDLLGR+GRL +A
Sbjct: 362 VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 421

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           ++ I+ MP+EP   V+GA+LGAC+++ NVELG++ A +L  LDP +   +++L+NIY+AA
Sbjct: 422 YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 481

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
            +W   +KVR +M+++ L + PGCS +E  N++H F  G   HP+S  I+T LE LI +I
Sbjct: 482 GLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI 541

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           + AG  P T  + HD+++ V+ ++++ HSEKLAIAFGLL +  G  + I KNLR+CGDCH
Sbjct: 542 REAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCH 601

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  K+ SL+  R II+RD  RFH F +G+CSC DYW
Sbjct: 602 STAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 205/403 (50%), Gaps = 13/403 (3%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V  +V +  + +  C  V        IH ++I +    D F    +V+MY K G  E+A 
Sbjct: 61  VYSIVQSLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQ 117

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRGDFITIVSILPAVANV 252
           ++FD MP +DLVSWN++++G +  G+    L+   RM  E GR+ + +T++S++ A A++
Sbjct: 118 RLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADM 177

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G+L  GK++HG  ++ G      V  +L++MY K G ++ A  +F+ M  R++VSWNSM+
Sbjct: 178 GALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 237

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             +   G  E+ M +F  M   G+ P   T++  L AC D G   +   +H  + +    
Sbjct: 238 VIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFN 297

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D+ +  +L+++Y+K  +++ + DIF +++ +  ++W AM+ GYA +    EA+  F  M
Sbjct: 298 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLM 357

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAK---WIHALVIRSCFEKNVFVMTALIDMYAKC 489
             + ++ D  T   ++ A +   ++   K    I + V R   E  +   + ++D+  + 
Sbjct: 358 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDLLGRS 415

Query: 490 GAVGTARALFDMMN-ERHVTTWNVMIDG---YGTHGLGKAAVE 528
           G +  A  L   M  E     W  ++     YG   LGK   E
Sbjct: 416 GRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 458



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 176/328 (53%), Gaps = 3/328 (0%)

Query: 35  PSRIYRHPSALLLEV--CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           P ++Y    +L+  +  CTS+     I   +IKS          +LVS++ K     DA 
Sbjct: 58  PFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQ 117

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDV 151
           R+F+ +P+K    +++++ G +    L   ++   RMR +    P       ++  C D+
Sbjct: 118 RLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADM 177

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           G +  GK +HG ++  G S     +  ++NMY K G ++ A ++F+ MP R LVSWN++V
Sbjct: 178 GALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 237

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
                NG+AE  +DL   M   G   D  T+V++L A  + G  R  +++H Y  R GF+
Sbjct: 238 VIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFN 297

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           + + ++TAL+++YAK GR+  +  +F+ +K R+ ++W +M+A Y       EA+++F  M
Sbjct: 298 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLM 357

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERG 359
           + +GVE  +VT    L AC+  G +E G
Sbjct: 358 VKEGVEVDHVTFTHLLSACSHSGLVEEG 385



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 9/192 (4%)

Query: 46  LLEVCTSL---KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  CT     ++   I   I + G     +  T L++L+ K   L+ +  +FE I D+ 
Sbjct: 271 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRD 330

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK---E 159
              +  ML GYA  A   +A+     M  + V      +T+LL  C   G +  GK   E
Sbjct: 331 RIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE 390

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNG 218
           I  ++      LD ++   +V++  + G++E+AY++   MP E     W  ++      G
Sbjct: 391 IMSEVYRVEPRLDHYSC--MVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYG 448

Query: 219 FAELALDLVTRM 230
             EL  ++  ++
Sbjct: 449 NVELGKEVAEQL 460


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/740 (35%), Positives = 412/740 (55%), Gaps = 65/740 (8%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           ++ + +   +  A RVF+ +PDK    +++M+ GY +     +A     R  +D +    
Sbjct: 23  IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREA-----RYLFDKMP--- 74

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
                                            +  +  G+++ Y K   + EA K FD 
Sbjct: 75  -------------------------------ERNTVSWNGLISGYVKNRMVSEARKAFDT 103

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPER++VSW  +V G+ Q G    A  L  +M E+    + ++   +L  +  V   RI 
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQV--RRID 157

Query: 259 KAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           +A      R  FD +    V   T ++  Y + GR+  AR +FD M  RNV+SW +MI+ 
Sbjct: 158 EA------RGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISG 211

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           YV+ G  + A ++F+ M     E   V+    L      G +E      +L D + +   
Sbjct: 212 YVQNGQVDVARKLFEVM----PEKNEVSWTAMLMGYTQGGRIEEA---SELFDAMPVKAV 264

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V+  N++I  + +  +V +A  +F +++ K   +W+AMI  Y + G   EALN F  M+ 
Sbjct: 265 VA-CNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQR 323

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + ++ +  +++SV+   A L+ + + + +HA +++S F+ +VFV + LI MY KCG +  
Sbjct: 324 EGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVK 383

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +FD  + + +  WN +I GY  HGL + A+++F++M       + +TF+  +SACS+
Sbjct: 384 ARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSY 443

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +G V+EG+  F S+K  Y +EP  +HY  MVDLLGRAG +N+A D IQKMP+E    ++G
Sbjct: 444 TGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWG 503

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+LGAC+ H N+ L E AA +L +L+P   G ++LL+NIYA+   W  +A++R  M  K 
Sbjct: 504 ALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKK 563

Query: 675 LQKTPGCSLVELKNEVHSFYSG-STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           + K+PGCS +E++  VH F  G STKHP+   I   LE L   ++ AGY PD++ + HDV
Sbjct: 564 VSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDV 623

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +   L  HSE+LA+AFGLL    G  I + KNLRVCGDCH+A K I+ +TGREII+
Sbjct: 624 DEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIIL 683

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFH FK+G CSC DYW
Sbjct: 684 RDANRFHHFKDGFCSCRDYW 703



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 220/449 (48%), Gaps = 26/449 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S + K   +S+A + F+ +P++    +  M++GY +   + +A +   +M   +V   
Sbjct: 84  LISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVV-- 141

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L   G + ++RR  E  G   +     D+ A T +++ Y + G++ EA ++FD
Sbjct: 142 --SWTVML---GGLIQVRRIDEARGLFDIMPVK-DVVARTNMISGYCQEGRLAEARELFD 195

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP R+++SW T+++G+ QNG  ++A  L   M E+      ++  ++L      G +  
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNE----VSWTAMLMGYTQGGRIEE 251

Query: 258 GKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
              +        FD++    V    A++  + + G V  AR VFD ++ ++  +W++MI 
Sbjct: 252 ASEL--------FDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIK 303

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y   G   EA+ +F  M  +GV+    +++  L  CA L  L+ G  VH  L + +  +
Sbjct: 304 VYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDS 363

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV + + LI+MY KC  + +A  IF +   K +V WN++I GYAQ+G V EAL  F +M 
Sbjct: 364 DVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMC 423

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           S  +  D  T V V+ A +    ++    I  ++  +   E        ++D+  + G V
Sbjct: 424 SSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLV 483

Query: 493 GTARALFDMMN-ERHVTTWNVMIDGYGTH 520
             A  L   M  E     W  ++    TH
Sbjct: 484 NDAMDLIQKMPVEADAIIWGALLGACRTH 512



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 177/342 (51%), Gaps = 12/342 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDD 133
           +T ++S +C+   L++A  +F+ +P +    + TM+ GY +   +D A   F +    ++
Sbjct: 174 RTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNE 233

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V+     +T +L      G I    E+   + V      + A   ++  + + G++ +A 
Sbjct: 234 VS-----WTAMLMGYTQGGRIEEASELFDAMPVKA----VVACNAMILGFGQNGEVAKAR 284

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD++ E+D  +W+ ++  + + GF   AL+L   M  EG + +F +++S+L   A++ 
Sbjct: 285 QVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLA 344

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL  G+ VH   +++ FDS V V++ L+ MY KCG +  AR +FD    +++V WNS+I 
Sbjct: 345 SLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIIT 404

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL-G 372
            Y + G  EEA+++F +M   G+    VT +  L AC+  G ++ G+ + + +    L  
Sbjct: 405 GYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVE 464

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
                   ++ +  +   V+ A D+  K+  +   + W A++
Sbjct: 465 PKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 15/196 (7%)

Query: 27  TLSQRAYIPSRIYRHPSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLF 82
            L QR  + S     PS + +L VC SL  L   R++   ++KS         + L++++
Sbjct: 319 ALMQREGVQSNF---PSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMY 375

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
            K   L  A ++F+    K   ++++++ GYA+   +++A+     M    +A     + 
Sbjct: 376 VKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFV 435

Query: 143 YLLKVCGDVGEIRRGKEI----HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
            +L  C   G+++ G EI      + +V   +     M   V++  + G + +A  +  +
Sbjct: 436 GVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACM---VDLLGRAGLVNDAMDLIQK 492

Query: 199 MP-ERDLVSWNTIVAG 213
           MP E D + W  ++  
Sbjct: 493 MPVEADAIIWGALLGA 508


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 278/845 (32%), Positives = 442/845 (52%), Gaps = 66/845 (7%)

Query: 33  YIPSRIYRHPS---------ALLLEVCTSLKELRR----ILPLIIKSGLCDQHLFQTKLV 79
           Y   R++R P+         A LL+ C    +LRR       L++             L+
Sbjct: 4   YWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 63

Query: 80  SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP--V 137
           +++     L+ A R+F  +P +    + T++ G ++     DA++    MR   VAP  +
Sbjct: 64  TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRL 123

Query: 138 VYNYTY----------------------------------------------LLKVCGDV 151
           +Y   +                                              LL+ CG  
Sbjct: 124 IYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRA 183

Query: 152 GEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           G++RRG+ +H +L+++G +    F    ++ MY+ C  +  A ++F  MP R+ VSW T+
Sbjct: 184 GDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 243

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           V+G +QN     AL     M   G       + S   A A +G+    ++    A   GF
Sbjct: 244 VSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGF 302

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           D+ + V++ L DMY+KCG +  A  VFD M  ++ V+W +MI  Y + G+ E A+  F+ 
Sbjct: 303 DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRD 362

Query: 331 MLDQGVEPTNVTIM-EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           M  +G+   +  +    L A   L D      +H  + +     +V++ N+LI MY+K  
Sbjct: 363 MKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSM 422

Query: 390 KVDRAADIFS-KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
            V+ A+ +      G  +VS  +MI GY +   V EAL  + ++R + ++P+ FT  S+I
Sbjct: 423 DVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 482

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              A  +++     +HA VI++   ++ FV + L+DMY KCG +  +  LF+ +  R   
Sbjct: 483 KGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDI 542

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN +I+ +  HG G+ A++ F++M+    +PN I F+  ++ACSH+GLV+EG+ YF S+
Sbjct: 543 AWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSM 602

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           K+ +GIEP  +HY  ++D  GRAGRL+EA+ FI +MPI+P    + ++LGAC++  + EL
Sbjct: 603 KEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKEL 662

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           GE AA  L +L+P   G HV L+ IYA+   W+ +  VR +M    ++K PG S V+   
Sbjct: 663 GEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNK 722

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEK 747
           + H F S    HPQ K IY  LE L   IK  GY+PDT+ +  ++ED  +E +L  HSE+
Sbjct: 723 KTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSER 782

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           +A+AF L++      I ++KNLR+C DCH A K+I  V  R+IIVRD  RFH F NG CS
Sbjct: 783 IAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCS 842

Query: 808 CGDYW 812
           CGDYW
Sbjct: 843 CGDYW 847



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 261/545 (47%), Gaps = 24/545 (4%)

Query: 17  PTQTL---HEHKHTLSQRAYIPSRIYRHPS---------ALLLEVCTSLKELRR----IL 60
           P  TL   H H        Y   R++R P+         A LL+ C    +LRR      
Sbjct: 135 PKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHA 194

Query: 61  PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
            L++             L++++     L+ A R+F  +P +    + T++ G ++     
Sbjct: 195 RLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHA 254

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           DA++    MR   VAP  +  +   +    +G   R +       V GF  +LF  + + 
Sbjct: 255 DALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASV-GFDTELFVASNLA 313

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DF 239
           +MY+KCG + EA ++FD+MP++D V+W  ++ G+A+NG  E A+     M  EG  G D 
Sbjct: 314 DMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQ 373

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RLVFD 298
               S+L A   +    + K++H    +AGF+  V V  AL+DMYAK   VE+A R++  
Sbjct: 374 HVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKI 433

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
                NVVS  SMI  Y+E    EEA+ I+ ++  QGVEP   T    +  CA    LE+
Sbjct: 434 DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQ 493

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H  + +  L  D  + ++L+ MY KC  +  +  +F++++ +T ++WNA+I  +AQ
Sbjct: 494 GAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQ 553

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVF 477
           +G   EA+  F +M    I+P+    VS++ A +   ++    K+ +++      E    
Sbjct: 554 HGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEE 613

Query: 478 VMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDG---YGTHGLGKAAVELFNKM 533
             + +ID Y + G +  A + + +M  + +   W  ++      G+  LG+ A +   K+
Sbjct: 614 HYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKL 673

Query: 534 LEGPT 538
             G T
Sbjct: 674 EPGNT 678


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/672 (36%), Positives = 386/672 (57%), Gaps = 4/672 (0%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           L+ CG  G++R G+ +H +L+++G +    F    ++ MY+ C  +  A ++FD MP  +
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSW T+V+G  QN     AL   + M   G       + S   A A + +   G  +H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +R GFD+ + V++ L DMY+K G +  A  VFD M  ++ V+W +MI  Y + GN E 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 324 AMRIFQKMLDQGVEPTNVTIM-EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           A+  F+ M  +G+   +  ++   L A   L D      +H  + +     +V++ N+L 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 383 SMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
            MY+K   +D AA +    QG   +VS  ++I GY +   + +AL  F ++R + ++P+ 
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FT  S+I   A  +++     +HA VI++    + FV + L+DMY KCG +  +  LF  
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           +       WN  I+    HG G+ A+  F++M     +PN ITF+  ++ACSH+GLV+EG
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG 443

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           + YF S+K  +GIEP  +HY  ++D+ GRAGRL+EA  FI +MP++P    + ++LGAC+
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACR 503

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +  N ELGE AA+ + +L+PD  G HV L+ IYA+   W+ +  VR +M    ++K PG 
Sbjct: 504 MRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGF 563

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENL 740
           S V+   + H F S    HPQ ++IY  LE L + IK  GYVPDT  +  ++ED  ++ +
Sbjct: 564 SWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRI 623

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSE++A+AF L++      I ++KNLR+C DCH+A K+IS V  R+IIVRD  RFH 
Sbjct: 624 LRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHH 683

Query: 801 FKNGVCSCGDYW 812
           F  G CSCGDYW
Sbjct: 684 FVKGGCSCGDYW 695



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 228/463 (49%), Gaps = 7/463 (1%)

Query: 47  LEVCTSLKELR--RIL--PLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+ C    +LR  R L   L++             L++++     +  A R+F+ +P   
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + T++ G  + +   DA++    M    + P  +  +   +    +     G ++H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  GF  +LF  + + +MY+K G + EA ++FD+MP++D V+W  ++ G+A+NG  E 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 223 ALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           A+     M  EG  G D   + S+L A   +    + +A+H   M++GF+  V V  AL 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 282 DMYAKCGRVET-ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           DMYAK   ++  AR+V     S NVVS  S+I  Y+E    E+A+ +F ++  QGVEP  
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T    +  CA    LE+G  +H  + +  L +D  ++++L+ MY KC  +  +  +F +
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++  T ++WNA I   AQ+G   EA+  F +M S  I+P+  T VS++ A +   ++   
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG 443

Query: 461 -KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
            K+ +++      E      + +IDMY + G +  A      M
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEM 486



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT-MLKGYAK 115
           R I   ++KSG   +   +  L  ++ K   + +AARV +     L+ +  T ++ GY +
Sbjct: 241 RAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIE 300

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
              ++ A+   I +R   V P  + ++ ++K C     + +G ++H ++I      D F 
Sbjct: 301 TDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFV 360

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
            + +++MY KCG I  + ++F  +     ++WN  +   AQ+G    A+    RM   G 
Sbjct: 361 SSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGI 420

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETA 293
           R + IT VS+L A ++ G +  G   + Y+M+   G +      + ++DMY + GR++ A
Sbjct: 421 RPNHITFVSLLTACSHAGLVDEGLK-YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEA 479

Query: 294 RLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC-A 351
                 M  + N   W S++ A    GN E        M+   +EP N  +  +L    A
Sbjct: 480 EKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMK--LEPDNTGVHVSLSGIYA 537

Query: 352 DLGDLERGIFVHKLL 366
            LG  E    V KL+
Sbjct: 538 SLGQWEDVKAVRKLM 552


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/698 (35%), Positives = 392/698 (56%), Gaps = 29/698 (4%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L+       I  G ++HG L+  GF  D      +++MYAKCG++  A ++F  MPER+
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVH 262
           +VSW  ++ GF ++G A   L L+  M        +  T+ + L A   VG +  G  +H
Sbjct: 70  VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           G  +RAGF+    V+ +LV +Y+K GR+  AR VFDG   RN+V+WN+MI+ Y   G+  
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189

Query: 323 EAMRIFQKMLDQGVE-----PTNVTIMEALHACADLGDLERGIFVHK--LLDQLKLGTDV 375
           +++ +F++M  +  E     P   T    L AC  LG    G  VH   ++  +   ++ 
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249

Query: 376 SMTNSLISMYSKCK-KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            +  +L+ MY KC+  +  A  +F++L+ K  + W  +I+G+AQ G+V EA+  F +  S
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWS 309

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             ++ D   + SV+   A+ +++   + +H   +++    +V V  +LIDMY KCG    
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDE 369

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A   F  +  R+V +W  MI+G G HG G+ A+ +F +M     +P+++ +L  +SACSH
Sbjct: 370 AARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSH 429

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           SGLVEE   YF++++ D  + P  +HY  MVDLLGRAG L+EA D +  MP+ P + V+ 
Sbjct: 430 SGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQ 489

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            +L AC++HKNV +G +A   L  +D D    +V+L+NI+A A  W +  +VR  M ++G
Sbjct: 490 TLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRG 549

Query: 675 LQKTPGCSLVELKNEVHSFYSGS-TKHPQSKRIYTFLETLIDEIKAA-GYVPDTN----- 727
           L+K  GCS VE+  E H FY G    HP++  I   L  +   ++   GY P ++     
Sbjct: 550 LRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSE 609

Query: 728 -SIHDVEDYVQENLLSSHSEKLAIAFGLL-------NSSPGST-----IHIRKNLRVCGD 774
            ++HDV++  +   L +HSE+LA+   LL           G T     I + KNLRVCGD
Sbjct: 610 AALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGD 669

Query: 775 CHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CH   K +S V GR ++VRD +RFH F++GVCSC DYW
Sbjct: 670 CHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 227/473 (47%), Gaps = 19/473 (4%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G     +    L+ ++ K   L  A  VF  +P++    +  ++ G+ +     + 
Sbjct: 30  LLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDAREC 89

Query: 123 VSFLIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           +  L  MR   DVAP  +  +  LK CG VG++  G  IHG  +  GF         +V 
Sbjct: 90  LRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVL 149

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-----EEGRR 236
           +Y+K G+I +A ++FD    R+LV+WN +++G+A  G    +L +   M      EE  +
Sbjct: 150 LYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQ 209

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCG-RVETA 293
            D  T  S+L A  ++G+ R G  VH   +  G  +  N  ++ AL+DMY KC   +  A
Sbjct: 210 PDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMA 269

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             VF+ ++ +N + W ++I  + + G  +EAM +F +    GV      +   +   AD 
Sbjct: 270 MQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADF 329

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             +E+G  VH    +   G DVS+ NSLI MY KC   D AA  F ++  + +VSW AMI
Sbjct: 330 ALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMI 389

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI----RYAKWI-HALVI 468
            G  ++G   EA++ F +MR++ ++PD    ++++ A +   ++    RY   I H   +
Sbjct: 390 NGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRL 449

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           R   E        ++D+  + G +  A+ L   M     V  W  ++     H
Sbjct: 450 RPRAEH----YACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVH 498



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 210/426 (49%), Gaps = 23/426 (5%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  +L A A   ++  G  +HG  ++ GF S   +   L+DMYAKCG +  A  VF GM 
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGI 360
            RNVVSW +++  ++  G+  E +R+   M     V P   T+  +L AC  +GD+  G+
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           ++H    +        + NSL+ +YSK  ++  A  +F     + LV+WNAMI GYA  G
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 421 RVNEALNYFCKMRSK-----NIKPDSFTMVSVIPALAELSVIRYAKWIH-ALVIRS-CFE 473
              ++L  F +M+ +     + +PD FT  S++ A   L   R    +H A+VIR     
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 474 KNVFVMTALIDMYAKCGA-VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
            N  +  AL+DMY KC   +  A  +F+ + +++   W  +I G+   G  K A+ELF +
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
                 + +       +   +   LVE+G  +H +T +K   G++  + +  +++D+  +
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYT-VKTPAGLDVSVAN--SLIDMYHK 363

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL-----DPDEGG 645
            G  +EA    +++P    +  + AM+     H +   G++A +   E+     +PDE  
Sbjct: 364 CGLTDEAARRFREVPAR-NVVSWTAMINGLGKHGH---GQEAIHMFEEMRAEGVEPDEVA 419

Query: 646 YHVLLA 651
           Y  LL+
Sbjct: 420 YLALLS 425



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 6/216 (2%)

Query: 44  ALLLEVCTSL---KELRRILPLIIKSGL--CDQHLFQTKLVSLFCKYNSLSDAA-RVFEP 97
           A LL+ C SL   +E  ++   ++  G+      +    L+ ++ K   L   A +VF  
Sbjct: 216 ASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNR 275

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +  K    + T++ G+A+   + +A+    R     V    +  + ++ V  D   + +G
Sbjct: 276 LEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQG 335

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           +++H   +     LD+     +++MY KCG  +EA + F  +P R++VSW  ++ G  ++
Sbjct: 336 RQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKH 395

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           G  + A+ +   M  EG   D +  +++L A ++ G
Sbjct: 396 GHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSG 431


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/695 (34%), Positives = 399/695 (57%), Gaps = 7/695 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+ ++ ++  L +A  VFE + ++    +++++ GY      +DA+    + R   + P 
Sbjct: 162 LIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPD 221

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  CG +  ++ G  +HG +   G + D+    G+++MY K  ++ EA ++F 
Sbjct: 222 CFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M  +D V+WNT++ G+AQ G  E ++ L   M + G   D ++I S + A    G L++
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQV 340

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK VH Y + +GF+        L+DMYAKCG +  A+ VFD  K ++ V+WNS+I  Y +
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  +E +  F KM+    +P +VT +  L   + L D+ +G  +H   D +K G +  +
Sbjct: 401 SGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIH--CDVIKFGFEAEL 457

Query: 378 T--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
              NSL+ +Y+KC ++D    +FS +    ++SWN +I                 +MR++
Sbjct: 458 IIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTE 517

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            + PD  T++ ++P  + L+V R  K IH  + +S FE NV +  ALI+MY+KCG++   
Sbjct: 518 GLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENC 577

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F  M E+ V TW  +I  +G +G GK A++ F  M      P+ + F+  I ACSHS
Sbjct: 578 IKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHS 637

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G+V+EG+ +F  +K DY +EP M+HY  +VDLL R+G L +A +FI  MP++P  +++GA
Sbjct: 638 GMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC+   N  + ++ + ++ EL+ D+ GY+VL++NIYA    WD++  VR  M+ KGL
Sbjct: 698 LLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGL 757

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVED 734
           +K PG S +E++  V+ F +G     Q  ++   LE L+  +   GYV D   ++HDVE+
Sbjct: 758 KKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEE 817

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
             + ++L  HSE+LAIAFGLLN+ PGS + I   L
Sbjct: 818 DDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 239/454 (52%), Gaps = 4/454 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PER 202
           LLK         + + +H  +I +G SL +     +++ YA+      +  +F  + P  
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++  WN+I+     NG    AL   T M E+  + D  T  S++ + A +  L +G  VH
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
            +AM  GF+S + +  AL+DMY++   ++ AR VF+ M +R+ VSWNS+I+ Y   G  E
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A+ ++ K    G+ P   T+   L AC  L  ++ G+ VH +++++ +  DV + N L+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           SMY K +++  A  +FSK+  K  V+WN MI GYAQ GR   ++  F  M    + PD  
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDML 323

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ S I A  +   ++  K++H  +I S FE +      LIDMYAKCG +  A+ +FD  
Sbjct: 324 SITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTT 383

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
             +   TWN +I+GY   G  K  +E F KM++   KP+ +TF+  +S  S    + +G 
Sbjct: 384 KCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGR 442

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
                + K +G E  +    +++D+  + G +++
Sbjct: 443 GIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDD 475



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 429 FCKMRSKNIKPDS-FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
           FC   +   +P   F   S++  L+        + +H+L+I S    +V     LI  YA
Sbjct: 6   FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65

Query: 488 KCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           +     ++ ++F  ++   +V  WN +I     +GL   A+  + +M E   +P+  TF 
Sbjct: 66  QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125

Query: 547 CAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
             I++C+    +E G  +H       + G E  +    A++D+  R   L+ A    ++M
Sbjct: 126 SVINSCARILDLELGCIVHEHA---MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 605 PIEPGITVFGAMLGAC 620
                ++    + G C
Sbjct: 183 SNRDSVSWNSLISGYC 198


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/693 (33%), Positives = 388/693 (55%), Gaps = 22/693 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C + G +   + +HG ++  G + D+F  T +VN+Y +C    +A ++FD MP
Sbjct: 79  YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ++++V+W  ++ G   N    LAL++   M E GR     T+  +L A +    + +G+ 
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VHGY+++ G D+I ++  +L  +Y K G +E+    F G   +NV++W +MI++  E  N
Sbjct: 199 VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDEN 258

Query: 321 -PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             +  + +F  ML+ GV P   T+   +  C    D+  G  V     ++    ++ + N
Sbjct: 259 YLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKN 318

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-----------NGRVNEALNY 428
           S + +Y +  + D A  +F ++   ++++WNAMI GYAQ             R  +AL  
Sbjct: 319 STMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F  +    +KPD FT  S++   + +  +   + IHA  I++    +V V +AL++MY K
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG++  A   F  M  R   TW  MI GY  HG  + A++LF  M+    +PN+ITF+  
Sbjct: 439 CGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSL 498

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +SACS++GLVEE   YF  ++ +Y IEP++DHYG MVD+  R GRL++A+ FI++   EP
Sbjct: 499 LSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP 558

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++ +++  C+ H N+EL   AA+RL EL P     +VLL N+Y +   W  +A+VR 
Sbjct: 559 NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRK 618

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           + + + +      S + ++++V+ F +    HPQ+  +Y  LE L+++ KA GY P  N+
Sbjct: 619 LAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNA 678

Query: 729 IHDVEDYVQEN----------LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
              + D  + +          L+  HSE+LA+A GLL + PG+T+ + KN+ +C DCH++
Sbjct: 679 PELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSS 738

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            KY SL+  REI+VRD  R H FK+G CSCGD+
Sbjct: 739 IKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 235/489 (48%), Gaps = 18/489 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K+G        T LV+++ +  S  DA R+F+ +PDK    +  ++ G+   +    A
Sbjct: 102 MVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALA 161

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +   + M      P  Y    +L  C     I  G+++HG  I  G          +  +
Sbjct: 162 LEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRL 221

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRMHEEGRRGDFIT 241
           Y K G +E   + F   P++++++W T+++  A++  + +L L L   M E G   +  T
Sbjct: 222 YCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFT 281

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + S++        + +GK V  +  + G ++ + V  + + +Y + G  + A  +F+ M 
Sbjct: 282 LTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD 341

Query: 302 SRNVVSWNSMIAAYVEGGNPE-----------EAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           S ++++WN+MI+ Y +  +             +A+++F+ ++   ++P   T    L  C
Sbjct: 342 SSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVC 401

Query: 351 ADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           + +  LE+G  +H   + +K G  +DV + ++L++MY+KC  ++ A   F ++  +T V+
Sbjct: 402 SAMMALEQGEQIHA--NTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVT 459

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           W +MI GY+Q+GR  +A+  F  M     +P+  T VS++ A +   ++  A ++   + 
Sbjct: 460 WTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMR 519

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAA 526
                E  V     ++DM+ + G +  A +       E +   W+ ++ G  +HG  + A
Sbjct: 520 NEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 579

Query: 527 VELFNKMLE 535
               +++LE
Sbjct: 580 FYAADRLLE 588



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 17/396 (4%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  +G+       V +L      G L   +A+HG+ ++ G  + + V+T+LV++Y +C  
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              AR +FDGM  +NVV+W ++I  +     P  A+ +F +ML+ G  P++ T+   L A
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 350 CADLGDLERGIFVHKLLDQLKLGTD--VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           C+    ++ G  VH     +K G D   SM NSL  +Y K   ++     F     K ++
Sbjct: 187 CSAARRIDLGQQVHGY--SIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVI 244

Query: 408 SWNAMILGYAQN-GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           +W  MI   A++   ++  L+ F  M    + P+ FT+ SV+        +   K + A 
Sbjct: 245 TWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAF 304

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG-------- 518
             +   E N+ V  + + +Y + G    A  LF+ M+   + TWN MI GY         
Sbjct: 305 CYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKD 364

Query: 519 ---THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
                  G  A++LF  ++    KP+  TF   +S CS    +E+G     +  K   + 
Sbjct: 365 DLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLS 424

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
            V+ +  A+V++  + G +  A     +MP    +T
Sbjct: 425 DVVVN-SALVNMYNKCGSIECATKAFVEMPTRTPVT 459



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 19/199 (9%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L VC++   L++  +I    IK+G     +  + LV+++ K  S+  A + F  +P + 
Sbjct: 397 ILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRT 456

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK---- 158
              + +M+ GY++     DA+     M      P    +  LL  C   G +   +    
Sbjct: 457 PVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFD 516

Query: 159 ----EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
               E H + +V+ +         +V+M+ + G++++A+    R   E +   W+++VAG
Sbjct: 517 MMRNEYHIEPLVDHYGC-------MVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAG 569

Query: 214 FAQNGFAELALDLVTRMHE 232
              +G  ELA     R+ E
Sbjct: 570 CRSHGNMELAFYAADRLLE 588


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/644 (36%), Positives = 390/644 (60%), Gaps = 19/644 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++ +  G+V+ Y K G+I+EA K+FD MPER++VSW  +V G+  NG  ++A  L  +M 
Sbjct: 78  NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E+ +    + ++  L         RI  A   Y M    D+I    T+++    K GRV+
Sbjct: 138 EKNKVSWTVMLIGFLQ------DGRIDDACKLYEMIPDKDNIAR--TSMIHGLCKEGRVD 189

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR +FD M  R+V++W +M+  Y +    ++A +IF  M     E T V+    L    
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYV 245

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
             G +E      +L + + +   ++  N++IS   +  ++ +A  +F  ++ +   SW  
Sbjct: 246 QNGRIEDA---EELFEVMPVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           +I  + +NG   EAL+ F  M+ + ++P   T++S++   A L+ + + K +HA ++R  
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +V+V + L+ MY KCG +  ++ +FD    + +  WN +I GY +HGLG+ A+++F 
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421

Query: 532 KM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           +M L G TKPN++TF+  +SACS++G+VEEG+  + S++  +G++P+  HY  MVD+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGR NEA + I  M +EP   V+G++LGAC+ H  +++ E  A +L E++P+  G ++LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS-TKHPQSKRIYTF 709
           +N+YA+   W  +A++R +M+ + ++K+PGCS  E++N+VH+F  G    HP+ + I   
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601

Query: 710 LETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L+ L   ++ AGY PD + ++HDV++  + N L  HSE+LA+A+ LL  S G  I + KN
Sbjct: 602 LDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKN 661

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVC DCH A K IS V  REII+RD +RFH F+NG CSC DYW
Sbjct: 662 LRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 220/464 (47%), Gaps = 25/464 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS + K   + +A +VF+ +P++    +  ++KGY     +D A S   +M   +    
Sbjct: 85  LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV-- 142

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L      G I    +++ ++I +    D  A T +++   K G+++EA ++FD
Sbjct: 143 --SWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLCKEGRVDEAREIFD 196

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ER +++W T+V G+ QN   + A  +   M E+      ++  S+L      G  RI
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNG--RI 250

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
             A   + +      I     A++    + G +  AR VFD MK RN  SW ++I  +  
Sbjct: 251 EDAEELFEVMPVKPVI--ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F  M  QGV PT  T++  L  CA L  L  G  VH  L + +   DV +
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKN 436
            + L++MY KC ++ ++  IF +   K ++ WN++I GYA +G   EAL  FC+M  S +
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA----LIDMYAKCGAV 492
            KP+  T V+ + A +   ++     I+   + S F   V  +TA    ++DM  + G  
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVF--GVKPITAHYACMVDMLGRAGRF 485

Query: 493 GTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             A  + D M  E     W  ++    TH     A     K++E
Sbjct: 486 NEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 161/301 (53%), Gaps = 13/301 (4%)

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           ++ +T ++   CK   + +A  +F+ + ++    + TM+ GY +   +DDA         
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF----- 226

Query: 132 DDVAPVVYNYTYLLKVCGDV--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
            DV P     ++   + G V  G I   +E+   + V      + A   +++   + G+I
Sbjct: 227 -DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEI 281

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
            +A ++FD M ER+  SW T++    +NGF   ALDL   M ++G R  F T++SIL   
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A++ SL  GK VH   +R  FD  V V++ L+ MY KCG +  ++L+FD   S++++ WN
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401

Query: 310 SMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           S+I+ Y   G  EEA+++F +M L    +P  VT +  L AC+  G +E G+ +++ ++ 
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461

Query: 369 L 369
           +
Sbjct: 462 V 462



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 30/360 (8%)

Query: 266 MRAGFDSIVNVSTALVDM--YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           +R  + + +   TA V +   ++ G++  AR +FD   S+++ SWNSM+A Y     P +
Sbjct: 7   LRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A ++F +M D+ +   N  +   +      G+++      K+ D +     VS T +L+ 
Sbjct: 67  ARKLFDEMPDRNIISWNGLVSGYMKN----GEIDEA---RKVFDLMPERNVVSWT-ALVK 118

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            Y    KVD A  +F K+  K  VSW  M++G+ Q+GR+++A    CK+       D+  
Sbjct: 119 GYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIA 174

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
             S+I  L +   +  A+ I         E++V   T ++  Y +   V  AR +FD+M 
Sbjct: 175 RTSMIHGLCKEGRVDEAREI----FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           E+   +W  M+ GY  +G  + A ELF  M   P KP  I     IS     G + +   
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKPV-IACNAMISGLGQKGEIAKARR 286

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD---FIQKMPIEPGITVFGAMLGAC 620
            F S+K+          +  ++ +  R G   EA D    +QK  + P      ++L  C
Sbjct: 287 VFDSMKERNDAS-----WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 7/267 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S   +   ++ A RVF+ + ++ DA + T++K + +     +A+   I M+   V P 
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 +L VC  +  +  GK++H QL+   F +D++  + ++ MY KCG++ ++  +FD
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLR 256
           R P +D++ WN+I++G+A +G  E AL +   M   G  + + +T V+ L A +  G + 
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450

Query: 257 IGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
            G  ++  +M +  G   I      +VDM  + GR   A  + D M    +   W S++ 
Sbjct: 451 EGLKIY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           A       + A    +K+++  +EP N
Sbjct: 510 ACRTHSQLDVAEFCAKKLIE--IEPEN 534



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 22/263 (8%)

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N  I+  S+  K+  A  +F     K++ SWN+M+ GY  N    +A   F +M  +NI 
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
               +   ++    +   I  A+ +  L+     E+NV   TAL+  Y   G V  A +L
Sbjct: 80  ---ISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAESL 132

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F  M E++  +W VM+ G+   G    A +L+  +   P K N I     I      G V
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDN-IARTSMIHGLCKEGRV 188

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           +E    F  + +   I      +  MV   G+  R+++A      MP +  ++    ++G
Sbjct: 189 DEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243

Query: 619 ACKIHKNVELGEKAANRLFELDP 641
             + +  +E  E+    LFE+ P
Sbjct: 244 YVQ-NGRIEDAEE----LFEVMP 261


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/612 (40%), Positives = 365/612 (59%), Gaps = 11/612 (1%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++    + G  + A+ L+       +R    T   ++ + A   SL  G  VH   + 
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCCEPNPTQR----TFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +GFD    ++T L++MY + G ++ AR VFD  + R +  WN++  A    G  +E + +
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDL 166

Query: 328 FQKMLDQGVEPTNVTIMEALHACA----DLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           + +M   G+     T    L AC      +  L++G  +H  + +     ++ +  +L+ 
Sbjct: 167 YVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLD 226

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDS 441
           +Y+K   V  A  +F  +  K  VSW+AMI  +A+N    +AL  F  M   + +  P+S
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNS 286

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            TMV+V+ A A L+ +   K IH  ++R   +  + V+ ALI MY +CG +   + +FD 
Sbjct: 287 VTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDN 346

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M  R V +WN +I  YG HG GK A+++F  M+   + P+ I+F+  + ACSH+GLVEEG
Sbjct: 347 MKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEG 406

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
              F S+   Y I P M+HY  MVDLLGRA RL+EA   I+ M  EPG TV+G++LG+C+
Sbjct: 407 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCR 466

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH NVEL E+A+  LFEL+P   G +VLLA+IYA A MW +   V  ++E +GLQK PGC
Sbjct: 467 IHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGC 526

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E+K +V+SF S    +PQ + I+  L  L +E+KA GYVP TN + +D+++  +E +
Sbjct: 527 SWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERI 586

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           +  HSEKLA+AFGL+N+  G TI IRKNLR+C DCH  TK+IS    REI+VRD++RFH 
Sbjct: 587 VLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHH 646

Query: 801 FKNGVCSCGDYW 812
           FK+GVCSCGDYW
Sbjct: 647 FKDGVCSCGDYW 658



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 230/471 (48%), Gaps = 18/471 (3%)

Query: 60  LPLIIKSGLCDQHLFQTKLVS--LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           +P I++      HL     VS  +   + SL+ +A +   I    + L  ++ KG     
Sbjct: 6   IPQIVRHAPSQSHLCYNSHVSSRVPVSFVSLNPSANLMNDIKGNNNQLIQSLCKG----G 61

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           +L  A+  L      +  P    + +L+  C     +  G ++H +L+ +GF  D F  T
Sbjct: 62  NLKQAIHLLC----CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLAT 117

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            ++NMY + G I+ A K+FD   ER +  WN +    A  G  +  LDL  +M+  G   
Sbjct: 118 KLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPS 177

Query: 238 DFITIVSILPAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           D  T   +L A      +V  L+ GK +H + +R G+++ ++V T L+D+YAK G V  A
Sbjct: 178 DRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYA 237

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACA 351
             VF  M ++N VSW++MIA + +   P +A+ +FQ M+ +  +  P +VT++  L ACA
Sbjct: 238 NSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACA 297

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            L  LE+G  +H  + +  L + + + N+LI+MY +C ++     +F  ++ + +VSWN+
Sbjct: 298 GLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNS 357

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRS 470
           +I  Y  +G   +A+  F  M  +   P   + ++V+ A +   ++   K +  +++ + 
Sbjct: 358 LISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKY 417

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH 520
                +     ++D+  +   +  A  L  DM  E   T W  ++     H
Sbjct: 418 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIH 468



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 14/298 (4%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           + L++ + I   I++ G        T L+ ++ K+ S+S A  VF  +P K    +  M+
Sbjct: 197 SPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMI 256

Query: 111 KGYAKFASLDDAVSF--LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
             +AK      A+    L+ +   D  P       +L+ C  +  + +GK IHG ++  G
Sbjct: 257 ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRG 316

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
               L  +  ++ MY +CG+I    ++FD M  RD+VSWN++++ +  +GF + A+ +  
Sbjct: 317 LDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFE 376

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVSTALVDM 283
            M  +G    +I+ +++L A ++ G +  GK      +  Y +  G +        +VD+
Sbjct: 377 NMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHY----ACMVDL 432

Query: 284 YAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
             +  R++ A +L+ D         W S++ +     N E A R    + +  +EP N
Sbjct: 433 LGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFE--LEPRN 488


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/531 (43%), Positives = 327/531 (61%), Gaps = 2/531 (0%)

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG V  AR VFD M SR+VVSW  +IA Y +   P EA+ +   ML     P   T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L A    G    G  +H L  +     DV + ++L+ MY++C+++D A  +F +L 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K  VSWNA+I G+A+       L  F +M+        FT  S+  A A +  +   +W
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA +I+S  +   FV   ++ MYAK G++  AR +FD M++R + TWN M+     +GL
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
           GK AV  F ++ +   + N ITFL  ++ACSH GLV+EG HYF  + KDY ++P +DHY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYV 299

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
           + VDLLGRAG L EA  F+ KMP+EP   V+GA+LGAC++HKN ++G+ AA+ +FELDPD
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
           + G  VLL NIYA+   W+  A+VR +M+  G++K P CS V+++N VH F +    HP+
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 703 SKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S  IY   E +   IK AGYVP+T + +  + +  +E  L  HSEK+A+AF L+N   G+
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +I I KN+R+CGDCH+A KY+S V  REI+VRD +RFH F  G CSCGDYW
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 175/340 (51%), Gaps = 1/340 (0%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MY KCG + +A  +FD+MP RD+VSW  ++AG+AQN     A+ L+  M     R +  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             S+L A    G   IG+ +H  A++  +D  V V +AL+DMYA+C +++ A +VFD + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           S+N VSWN++IA +    + E  +  F +M   G   T+ T      A A +G LE+G +
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           VH  L +        + N+++ MY+K   +  A  +F ++  + LV+WN M+   AQ G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
             EA+ +F ++R   I+ +  T +SV+ A +   +++  K    ++     +  +    +
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 482 LIDMYAKCGAVGTARA-LFDMMNERHVTTWNVMIDGYGTH 520
            +D+  + G +  A   +F M  E     W  ++     H
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 167/334 (50%), Gaps = 1/334 (0%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           ++CK  ++SDA  VF+ +P +    +  ++ GYA+     +A+  L  M      P  + 
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +T LLK  G  G    G+++H   +   +  D++  + +++MYA+C Q++ A  +FDR+ 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            ++ VSWN ++AGFA+    E  L     M   G      T  S+  A A +G+L  G+ 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH + +++G      V   ++ MYAK G +  AR VFD M  R++V+WN+M+ A  + G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +EA+  F+++   G++   +T +  L AC+  G ++ G     ++    +  ++    S
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 381 LISMYSKCKKVDRA-ADIFSKLQGKTLVSWNAMI 413
            + +  +   +  A   +F      T   W A++
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 121/242 (50%), Gaps = 5/242 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ ++ +   +  A  VF+ +  K +  ++ ++ G+A+ A  +  +     M+ +   
Sbjct: 97  SALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 156

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              + Y+ +      +G + +G+ +H  LI +G  L  F    ++ MYAK G + +A K+
Sbjct: 157 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 216

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDRM +RDLV+WNT++   AQ G  + A+     + + G + + IT +S+L A ++ G +
Sbjct: 217 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 276

Query: 256 RIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARL-VFDGMKSRNVVSWNSMI 312
           + GK  H + M   ++    +    + VD+  + G ++ A + VF          W +++
Sbjct: 277 KEGK--HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334

Query: 313 AA 314
            A
Sbjct: 335 GA 336


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/586 (39%), Positives = 367/586 (62%), Gaps = 3/586 (0%)

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           ++H      D I + S++ A+++  S+    A+H   +++   S   +   LV MY K G
Sbjct: 130 KLHNSSLLADSI-VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG 188

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEAL 347
             E A+ +FD M +R++VSWNS+++     G     +  F +M  + G +P  VT++  +
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            ACA +G L+ G  +H ++ +L +     + NSLI+MY K   +D A+ +F ++  ++LV
Sbjct: 249 SACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 308

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SWN+M++ +  NG   + ++ F  M+   I PD  TMV+++ A  +  + R A+ IHA +
Sbjct: 309 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 368

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
            R  F  ++ + TAL+++YAK G +  +  +F+ + +R    W  M+ GY  H  G+ A+
Sbjct: 369 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAI 428

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +LF+ M++   + + +TF   +SACSHSGLVEEG  YF  + + Y +EP +DHY  MVDL
Sbjct: 429 KLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDL 488

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGR+GRL +A++ I+ MP+EP   V+GA+LGAC+++ NVELG++ A +L  LDP +   +
Sbjct: 489 LGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNY 548

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           ++L+NIY+AA +W   +KVR +M+++ L + PGCS +E  N++H F  G   HP+S  I+
Sbjct: 549 IMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIH 608

Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
           T LE LI +I  AG  P T  + HD+++ V+ ++++ HSEKLAIAFGLL +  G  + I 
Sbjct: 609 TKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIIT 668

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLR+CGDCH+  K+ SL+  R II+RD  RFH F +G+CSC DYW
Sbjct: 669 KNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 167/311 (53%), Gaps = 1/311 (0%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           CTS+     I   +IKS          +LVS++ K     DA R+F+ +P++    ++++
Sbjct: 152 CTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSL 211

Query: 110 LKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           + G +    L   ++   RMR +    P       ++  C  +G +  GK +HG ++  G
Sbjct: 212 MSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLG 271

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
            S     +  ++NMY K G ++ A ++F+ MP R LVSWN++V     NG+AE  +DL  
Sbjct: 272 MSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 331

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M   G   D  T+V++L A  + G  R  +++H Y  R GF++ + ++TAL+++YAK G
Sbjct: 332 LMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLG 391

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           R+  +  +F+ +K R+ ++W +M+A Y       EA+++F  M+ +GVE  +VT    L 
Sbjct: 392 RLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLS 451

Query: 349 ACADLGDLERG 359
           AC+  G +E G
Sbjct: 452 ACSHSGLVEEG 462



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 146/311 (46%), Gaps = 15/311 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E + +  +++K G+  +      L++++ K   L  A+++FE +P +    +++M+ 
Sbjct: 256 ALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVV 315

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            +      +  +     M+   + P       LL+ C D G  R+ + IH  +   GF+ 
Sbjct: 316 IHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA 375

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+   T ++N+YAK G++  +  +F+ + +RD ++W  ++AG+A +     A+ L   M 
Sbjct: 376 DIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMV 435

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAV-----HGYAMRAGFDSIVNVSTALVDMYAK 286
           +EG   D +T   +L A ++ G +  GK         Y +    D      + +VD+  +
Sbjct: 436 KEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY----SCMVDLLGR 491

Query: 287 CGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT---NVT 342
            GR+E A  +   M        W +++ A    GN E    + +++L   ++P+   N  
Sbjct: 492 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYI 549

Query: 343 IMEALHACADL 353
           ++  +++ A L
Sbjct: 550 MLSNIYSAAGL 560


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/656 (39%), Positives = 393/656 (59%), Gaps = 12/656 (1%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAM-TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +++G+E+HG +I  G    +  +  G+VNMYAKCG I +A ++F  M E+D VSWN+++ 
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 213 GFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           G  QNG F E      +    E   G F T++S L + A++   ++G+ +HG +++ G D
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSF-TLISSLSSCASLKWAKLGQQIHGESLKLGID 167

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP-EEAMRIFQK 330
             V+VS AL+ +YA+ G +   R +F  M   + VSWNS+I A         EA+  F  
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 227

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
            L  G +   +T    L A + L   E G  +H L  +  +  + +  N+LI+ Y KC +
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 391 VDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +D    IFS++ + +  V+WN+MI GY  N  + +AL+    M     + DSF   +V+ 
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A A ++ +     +HA  +R+C E +V V +AL+DMY+KCG +  A   F+ M  R+  +
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 510 WNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           WN MI GY  HG G+ A++LF  M L+G T P+ +TF+  +SACSH+GL+EEG  +F S+
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC--KIHKNV 626
              YG+ P ++H+  M DLLGRAG L++  DFI KMP++P + ++  +LGAC     +  
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKA 527

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           ELG+KAA  LF+L+P+    +VLL N+YAA   W+ L K R  M+   ++K  G S V +
Sbjct: 528 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 587

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHS 745
           K+ VH F +G   HP +  IY  L+ L  +++ AGYVP T  +++D+E   +E +LS HS
Sbjct: 588 KDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHS 647

Query: 746 EKLAIAFGLLNSSPGSTIHIR--KNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
           EKLA+AF +L +   ST+ IR  KNLRVCGDCH+A KYIS + GR+II+RD +R+ 
Sbjct: 648 EKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 15/494 (3%)

Query: 53  LKELRRILPLIIKSGLCDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           LK+ R +   +I +GL D  +     LV+++ K  S++DA RVF  + +K    +++M+ 
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           G  +     +AV     MR  ++ P  +     L  C  +   + G++IHG+ +  G  L
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 168

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA--QNGFAELALDLVTR 229
           ++     ++ +YA+ G + E  K+F  MPE D VSWN+I+   A  +    E A+     
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE-AVACFLN 227

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
               G++ + IT  S+L AV+++    +GK +HG A++           AL+  Y KCG 
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 290 VETARLVFDGM-KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           ++    +F  M + R+ V+WNSMI+ Y+      +A+ +   ML  G    +      L 
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           A A +  LERG+ VH    +  L +DV + ++L+ MYSKC ++D A   F+ +  +   S
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 409 WNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYA-KWIHAL 466
           WN+MI GYA++G+  EAL  F  M+      PD  T V V+ A +   ++    K   ++
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMI------DGYGT 519
                    +   + + D+  + G +       D M  + +V  W  ++      +G   
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKA 527

Query: 520 HGLGKAAVELFNKM 533
             LGK A E+  ++
Sbjct: 528 E-LGKKAAEMLFQL 540


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/651 (39%), Positives = 376/651 (57%), Gaps = 12/651 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   +V  YAK  +I  A ++FD  P+ D VS+NT+++G+A       A+ L  RM 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E G   D  T+  ++ A  +   + + K +H +A+  GFDS  +V+ A V  Y+K G + 
Sbjct: 133 ELGFEVDGFTLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A  VF GM   R+ VSWNSMI AY +     +A+ ++++M+ +G +    T+   L+A 
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD---IFSKLQGKTLV 407
             L  L  G   H  L +     +  + + LI  YSKC   D  +D   +F ++    LV
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLV 310

Query: 408 SWNAMILGYAQNGR-VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            WN MI GY+ N     EA+  F +M+    +PD  + V V  A + LS     K IH L
Sbjct: 311 LWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGL 370

Query: 467 VIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            I+S    N + V  ALI +Y K G +  AR +FD M E +  ++N MI GY  HG G  
Sbjct: 371 AIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTE 430

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ L+ +ML+    PN+ITF+  +SAC+H G V+EG  YF ++K+ + IEP  +HY  M+
Sbjct: 431 ALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMI 490

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG+L EA  FI  MP +PG   + A+LGAC+ HKN+ L E+AA  L  + P    
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAAT 550

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +V+LAN+YA A  W+++A VR  M  K ++K PGCS +E+K + H F +    HP  + 
Sbjct: 551 PYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610

Query: 706 IYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +  +LE ++ ++K  GYV D         +  +  +E  L  HSEKLA+AFGL+++  G 
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGE 670

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I + KNLR+CGDCHNA K++S V GREIIVRD  RFHCFK+G CSCGDYW
Sbjct: 671 EIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 219/486 (45%), Gaps = 51/486 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +V  + K + +  A ++F+  P      Y+T++ GYA       A+    RMR       
Sbjct: 80  IVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVD 139

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + L+  C D   +   K++H   +  GF          V  Y+K G + EA  +F 
Sbjct: 140 GFTLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197

Query: 198 RMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
            M   RD VSWN+++  + Q+     AL L   M  +G + D  T+ S+L A+ ++  L 
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG---RVETARLVFDGMKSRNVVSWNSMIA 313
            G+  HG  ++AGF    +V + L+D Y+KCG    +  +  VF  + S ++V WN+MI+
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMIS 317

Query: 314 AY-VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y +   + EEA++ F++M   G  P + + +    AC++L    +G  +H L  +  + 
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIP 377

Query: 373 TD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           ++ +S+ N+LIS+Y K   +  A  +F ++     VS+N MI GYAQ+G   EAL  + +
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M    I P++ T V+++ A A                                    CG 
Sbjct: 438 MLDSGIAPNNITFVAILSACAH-----------------------------------CGK 462

Query: 492 VGTARALFDMMNER-----HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           V   +  F+ M E          ++ MID  G  G  + A    + M   P KP  + + 
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWA 519

Query: 547 CAISAC 552
             + AC
Sbjct: 520 ALLGAC 525



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 8/379 (2%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           S L+   C  +  ++++    +  G           V+ + K   L +A  VF  +    
Sbjct: 144 SGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLR 203

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + +++M+  Y +      A++    M +      ++    +L     +  +  G++ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCG---QIEEAYKMFDRMPERDLVSWNTIVAGFAQN- 217
           G+LI  GF  +    +G+++ Y+KCG    + ++ K+F  +   DLV WNT+++G++ N 
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNE 323

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNV 276
             +E A+    +M   G R D  + V +  A +N+ S   GK +HG A+++   S  ++V
Sbjct: 324 EHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISV 383

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           + AL+ +Y K G +  AR VFD M   N VS+N MI  Y + G+  EA+R++Q+MLD G+
Sbjct: 384 NNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGI 443

Query: 337 EPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            P N+T +  L ACA  G ++ G  + + + +  K+  +    + +I +  +  K++ A 
Sbjct: 444 APNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503

Query: 396 DIFSKLQGKT-LVSWNAMI 413
                +  K   V+W A++
Sbjct: 504 RFIDAMPYKPGSVAWAALL 522



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 205/469 (43%), Gaps = 75/469 (15%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  GK++H   +++   S   +S   V++Y+KCG +  AR  FD  +  NV S+N ++ A
Sbjct: 24  LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83

Query: 315 YVEGG-----------NPE--------------------EAMRIFQKMLDQGVEPTNVTI 343
           Y +             NP+                     AM +F++M + G E    T+
Sbjct: 84  YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTL 143

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              + AC D  DL + +  H         +  S+ N+ ++ YSK   +  A  +F  + G
Sbjct: 144 SGLIAACCDRVDLIKQL--HCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDG 201

Query: 404 -KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            +  VSWN+MI+ Y Q+    +AL  + +M  K  K D FT+ SV+ AL  L  +   + 
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCG---AVGTARALFDMMNERHVTTWNVMIDGYG- 518
            H  +I++ F +N  V + LID Y+KCG    +  +  +F  +    +  WN MI GY  
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSM 321

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH------------- 563
                + AV+ F +M     +P+D +F+C  SACS+     +G  IH             
Sbjct: 322 NEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRI 381

Query: 564 ---------YFTS-----LKKDYGIEPVMD--HYGAMVDLLGRAGRLNEAWDFIQKM--- 604
                    Y+ S      ++ +   P ++   +  M+    + G   EA    Q+M   
Sbjct: 382 SVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDS 441

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGGYHVLL 650
            I P    F A+L AC     V+ G+K  N +   F+++P+   Y  ++
Sbjct: 442 GIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMI 490



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 45/252 (17%)

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC-------------------------- 388
           DL  G  +H L  +  + +   ++N  +++YSKC                          
Sbjct: 23  DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82

Query: 389 -----KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
                 K+  A  +F +      VS+N +I GYA       A+  F +MR    + D FT
Sbjct: 83  AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           +  +I A  +   +   K +H   +   F+    V  A +  Y+K G +  A ++F  M+
Sbjct: 143 LSGLIAACCDR--VDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200

Query: 504 E-RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--------- 553
             R   +WN MI  YG H  G  A+ L+ +M+    K +  T    ++A +         
Sbjct: 201 GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260

Query: 554 --HSGLVEEGIH 563
             H  L++ G H
Sbjct: 261 QFHGKLIKAGFH 272


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/556 (41%), Positives = 353/556 (63%), Gaps = 2/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H   ++ G    +     L++MY K   +  A  +FD M  RN +S+ ++I  Y E
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                EA+ +F + L + V P   T    L ACA +  L  G  +H  + ++ L +DV +
Sbjct: 117 SVRFLEAIELFVR-LHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +N+L+ +Y+KC +++ + ++F++   +  V+WN +I+G+ Q G   +AL  F  M    +
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +    T  S + A A L+ +     IH+L +++ F+K++ V  ALIDMYAKCG++  AR 
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD+MN++   +WN MI GY  HGLG+ A+ +F+KM E   KP+ +TF+  +SAC+++GL
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           +++G  YFTS+ +D+GIEP ++HY  MV LLGR G L++A   I ++P +P + V+ A+L
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GAC IH ++ELG  +A R+ E++P +   HVLL+N+YA A  WD +A VR  M++KG++K
Sbjct: 416 GACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 475

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S +E +  VHSF  G T HP+ + I   LE L  + K AGY+P+ N +  DVED  
Sbjct: 476 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 535

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E LL  HSE+LA++FG++ +  GS I I KNLR+C DCH A K IS V  REI+VRD++
Sbjct: 536 KERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDIN 595

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH F+ G+CSCGDYW
Sbjct: 596 RFHHFQEGLCSCGDYW 611



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 22/421 (5%)

Query: 134 VAPVVYN---YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           V+P  +N   Y   L+ C    E  RGK +H +++  G  LDLFA   ++NMY K   + 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           +A K+FD MPER+ +S+ T++ G+A++     A++L  R+H E     F T  S+L A A
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQF-TFASVLQACA 149

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            +  L +G  +H + ++ G  S V VS AL+D+YAKCGR+E +  +F     RN V+WN+
Sbjct: 150 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNT 209

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I  +V+ G+ E+A+R+F  ML+  V+ T VT   AL ACA L  LE G+ +H L  +  
Sbjct: 210 VIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 269

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              D+ +TN+LI MY+KC  +  A  +F  +  +  VSWNAMI GY+ +G   EAL  F 
Sbjct: 270 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIR-----YAKWIHALVIRSCFEKNVFVMTALIDM 485
           KM+   +KPD  T V V+ A A   ++      +   I    I  C E      T ++ +
Sbjct: 330 KMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEH----YTCMVWL 385

Query: 486 YAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPN 541
             + G +  A  L D +  +  V  W  ++     H    LG+ + +   ++LE   +P 
Sbjct: 386 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQ---RVLE--MEPQ 440

Query: 542 D 542
           D
Sbjct: 441 D 441



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 183/328 (55%), Gaps = 4/328 (1%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDA 91
           PS    H  A  L+ C    E  R   L   I+K G C        L++++ K + L DA
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
           +++F+ +P++    + T+++GYA+     +A+   +R+ + +V P  + +  +L+ C  +
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATM 151

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +  G +IH  +I  G   D+F    ++++YAKCG++E + ++F   P R+ V+WNT++
Sbjct: 152 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVI 211

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
            G  Q G  E AL L   M E   +   +T  S L A A++ +L  G  +H   ++  FD
Sbjct: 212 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFD 271

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             + V+ AL+DMYAKCG ++ ARLVFD M  ++ VSWN+MI+ Y   G   EA+RIF KM
Sbjct: 272 KDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKM 331

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERG 359
            +  V+P  +T +  L ACA+ G L++G
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQG 359


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/792 (34%), Positives = 414/792 (52%), Gaps = 112/792 (14%)

Query: 133 DVAPVVYNYTYLLKVCG--DVGEIRRGKEIHGQLIVNGF--------------------- 169
           D+  +   Y   L++C   D       + +H  +I +GF                     
Sbjct: 6   DIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLV 65

Query: 170 ----------SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQN 217
                     + D  A T ++  Y   G +E   ++F+  P   RD V +N ++ G+A N
Sbjct: 66  YARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHN 125

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPA-VANVGSLRIGKAVHGYAMRAGFDSI-VN 275
           G    AL+L   M  +  R D  T  S+L A V  VG+ +    +H   ++ G   +  +
Sbjct: 126 GDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS 185

Query: 276 VSTALVDMYAK--------CGRVETARLVFDGMKSRNVVS-------------------- 307
           V  AL+ +Y K        C  + +AR +FD M  R+ ++                    
Sbjct: 186 VLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREV 245

Query: 308 -----------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                      WN+MI+ YV  G  +EA+ + +KM   G++  ++T    + ACA++G  
Sbjct: 246 FEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSF 305

Query: 357 ERGIFVHKLLDQLKLGTD----VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           + G  VH  + + +L  +    +S++N+LI++Y K  KVD A  IF  +  + +++WNA+
Sbjct: 306 QMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAI 365

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNI-------------------------------KPDS 441
           + GY   GR+ EA ++F +M  KN+                               +P  
Sbjct: 366 LSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCD 425

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           F     + A + L  +   + +HA ++   +E ++ V  A+I MYAKCG V  A ++F  
Sbjct: 426 FAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVT 485

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M    + +WN MI   G HG G  A+ELF++ML+    P+ ITFL  ++ACSH+GLVE+G
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKG 545

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            HYF S+ + YGI P  DHY  MVDL  RAG  + A   I  MP +PG  V+ A+L  C+
Sbjct: 546 RHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCR 605

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH N++LG +AA +LF+L P   G +VLL+NIYA    W+++AKVR +M  + ++K P C
Sbjct: 606 IHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPAC 665

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E++N+VH F      HP+   +Y +LE L  E+K  GY+PDT  + HD+E   +E+ 
Sbjct: 666 SWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHA 725

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           LS+HSEKLA+ FG++   PG+T+ + KN+R+CGDCHNA K++S V  REIIVRD  RFH 
Sbjct: 726 LSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHH 785

Query: 801 FKNGVCSCGDYW 812
           FKNG CSC DYW
Sbjct: 786 FKNGDCSCRDYW 797



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 280/640 (43%), Gaps = 133/640 (20%)

Query: 31  RAYIPSRIYRHPSALLLEVCT-----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           R  +  R+  +  A  L++C+     S    R +   +I SG   +  F  +L+ ++CK 
Sbjct: 2   RNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKS 61

Query: 86  NSLSDAARVFEPIPD---------------------------------KLDALYHTMLKG 112
           ++L  A ++FE IP+                                 +    Y+ M+ G
Sbjct: 62  SNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITG 121

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK-VCGDVGEIRRGKEIHGQLIVNGFS- 170
           YA       A+     MR DD  P  + +T +L  +   VG  ++  ++H  ++  G   
Sbjct: 122 YAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGC 181

Query: 171 LDLFAMTGVVNMYAK--------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN----- 217
           +    +  ++++Y K        C  +  A K+FD MP+RD ++W T++ G+ +N     
Sbjct: 182 VSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNG 241

Query: 218 --------------------------GFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
                                     G  + AL L  +M   G + D IT  +I+ A AN
Sbjct: 242 AREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACAN 301

Query: 252 VGSLRIGKAVHGYAMRAGFDS----IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           VGS ++GK VH Y ++   +      ++VS AL+ +Y K  +V+ AR +F  M  RN+++
Sbjct: 302 VGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT 361

Query: 308 WNSMIAAYVEGGNPEEA-------------------------------MRIFQKMLDQGV 336
           WN++++ YV  G  EEA                               +++F++M   G 
Sbjct: 362 WNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGF 421

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           EP +     AL AC+ LG LE G  +H  L  L   + +S+ N++ISMY+KC  V+ A  
Sbjct: 422 EPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAES 481

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  +    LVSWN+MI    Q+G   +A+  F +M  + + PD  T ++V+ A +   +
Sbjct: 482 VFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGL 541

Query: 457 IR-----YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-VTTW 510
           +      +   + +  I  C +        ++D++ + G    AR + D M  +     W
Sbjct: 542 VEKGRHYFNSMLESYGITPCEDH----YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVW 597

Query: 511 NVMIDGYGTHG---LG-KAAVELFNKMLEGPTKPNDITFL 546
             ++ G   HG   LG +AA +LF  M +     ND T++
Sbjct: 598 EALLAGCRIHGNMDLGIEAAEQLFKLMPQ-----NDGTYV 632


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/677 (37%), Positives = 392/677 (57%), Gaps = 23/677 (3%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDR 198
           YT L+  C +   +   K +H  ++ +G    LF+  G  +++ Y KC  I EA K+FD 
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSG---SLFSFFGHKLIDGYIKCSVITEARKLFDE 60

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MP R +V+WN++++     G  + A++L + M  EG   D  T  +I  A + +G  R G
Sbjct: 61  MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120

Query: 259 KAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           +  HG A+  GF+ S   V+T +VDMYAK G+++ AR VFD +  ++VV + ++I  Y +
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F+ M+   ++P   T+   L +C +LGDL  G  +H L+ +  L + V+ 
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             SL++MYSKC  V+ +  +F+ L   + V+W + I+G  QNGR   AL+ F +M   +I
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSI 300

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            P+ FT+ S++ A + L+++   + IHA+ ++   + N FV  ALI +Y KCG V  AR+
Sbjct: 301 SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD + E  + + N MI  Y  +G G  A+ELF ++ +   +PN +TF+  + AC+++GL
Sbjct: 361 VFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGL 420

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VEEG   F+ ++ ++ IE   DHY  M+DLLGRA R  EA   I++    P +  +  +L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLL 479

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            ACKIH  VE+ EK   ++ +  P +GG H+LL NIYA+A  WD + ++++      L+K
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
           TP  S V++  EVH+F +G   HP++  I   L  LI+++   GY PDT  +  D+E+  
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEK 599

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGST-IHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
           + + L  HSEKLAIAF L  +   +T I I KNLRVCGD               II RD 
Sbjct: 600 KISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGD--------------YIIARDA 645

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FK G+CSC DYW
Sbjct: 646 KRFHHFKGGICSCKDYW 662



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 262/502 (52%), Gaps = 8/502 (1%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  CT+ K L  +  L   I+KSG      F  KL+  + K + +++A ++F+ +P++ 
Sbjct: 7   LIAQCTNKKSLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEMPNRH 65

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++M+  +       +A+     M ++ V P  Y ++ + K   ++G  R G++ HG
Sbjct: 66  IVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHG 125

Query: 163 QLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +V GF + D F  TG+V+MYAK G++++A  +FDR+ ++D+V +  ++ G+ Q+G   
Sbjct: 126 LAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDG 185

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL++   M     + +  T+ S+L +  N+G L  GK +HG  ++ G +S+V   T+L+
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLL 245

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY+KC  VE +  VF+ +   + V+W S I   V+ G  E A+ +F++M+   + P + 
Sbjct: 246 TMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHF 305

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   LHAC+ L  LE G  +H +  +L +  +  +  +LI +Y KC  V++A  +F  L
Sbjct: 306 TLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSL 365

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +VS N MI  YAQNG  +EAL  F +++   ++P+  T +S++ A     ++    
Sbjct: 366 TELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGC 425

Query: 462 WIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
            I +L+  +   E      T +ID+  +      A  L +      V  W  +++    H
Sbjct: 426 QIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIH 485

Query: 521 GLGKAAVELFNKMLEGPTKPND 542
           G  + A +   KML+    P D
Sbjct: 486 GEVEMAEKFMKKMLD--QAPRD 505



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 151/298 (50%), Gaps = 8/298 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C +L +L   + I  L++K GL      QT L++++ K N + D+ +VF  +  
Sbjct: 207 ASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAY 266

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                + + + G  +    + A+S    M    ++P  +  + +L  C  +  +  G++I
Sbjct: 267 ASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQI 326

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   + F    ++++Y KCG +E+A  +FD + E D+VS NT++  +AQNGF 
Sbjct: 327 HAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFG 386

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV---NVS 277
             AL+L  R+ + G   + +T +SIL A  N G +  G  +  +++     SI    +  
Sbjct: 387 HEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQI--FSLIRNNHSIELTRDHY 444

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           T ++D+  +  R E A ++ +  K+ +V+ W +++ A    G  E A +  +KMLDQ 
Sbjct: 445 TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/710 (34%), Positives = 398/710 (56%), Gaps = 14/710 (1%)

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +F  LD   + L+     +    ++ Y  LL+ C D       + +HG ++  G   + F
Sbjct: 42  RFTHLDFGEALLLNKEGTEEEEKLF-YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFF 100

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            M+ +VN+YAKCG +E+A ++F+ MP R++V+W T++ GF QN   + A+ +   M   G
Sbjct: 101 VMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAG 160

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
                 T+ ++L A +++ SL++G   H Y ++   D   +V +AL  +Y+KCGR+E A 
Sbjct: 161 SYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDAL 220

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
             F  ++ +NV+SW S ++A  + G P + +R+F +M+ + ++P   T+  AL  C ++ 
Sbjct: 221 KAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIP 280

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            LE G  V  L  +    +++ + NSL+ +Y K   +  A   F+++   ++V+WNAMI 
Sbjct: 281 SLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIA 340

Query: 415 GYAQN-----------GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           G+AQ             R +EAL  F K+    +KPD FT+ SV+   + +  I   + I
Sbjct: 341 GHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQI 400

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           HA  I++ F  +V V T+LI MY KCG++  A   F  M+ R +  W  MI G+  HG+ 
Sbjct: 401 HAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMS 460

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           + A+ +F  M     +PN +TF+  +SACSH+G+V + ++YF  ++K Y I+PVMDHY  
Sbjct: 461 QQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYEC 520

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           MVD+  R GRL +A +FI+KM  EP   ++   +  C+ H N+ELG  A+ +L  L P +
Sbjct: 521 MVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKD 580

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
              +VLL N+Y +A  +D +++VR +ME + + K    S + +K++V+SF +    HP S
Sbjct: 581 PETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPS 640

Query: 704 KRIYTFLETLIDEIKAAGY--VPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
             I   LE L+ + K  GY  +       + E+    +    HSEKLAI FGL N    S
Sbjct: 641 SLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSS 700

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            I + K+  +C D HN  K +S +TGREIIV+D  R H F NG CSCG++
Sbjct: 701 PIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGNF 750



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 236/472 (50%), Gaps = 13/472 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K+G  D     + LV+++ K  ++ DA RVFE +P +    + T++ G+ + +    A
Sbjct: 90  VMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHA 149

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     M Y    P +Y  + +L  C  +  ++ G + H  +I      D    + + ++
Sbjct: 150 IHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSL 209

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+KCG++E+A K F R+ E++++SW + V+    NG     L L   M  E  + +  T+
Sbjct: 210 YSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTL 269

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S L     + SL +G  V    ++ G++S + V  +L+ +Y K G +  A   F+ M  
Sbjct: 270 TSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDD 329

Query: 303 RNVVSWNSMIAAYVE-----------GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            ++V+WN+MIA + +                EA++IF K+   G++P   T+   L  C+
Sbjct: 330 VSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCS 389

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            +  +E+G  +H    +    +DV ++ SLISMY+KC  ++RA+  F ++  +T+++W +
Sbjct: 390 RMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTS 449

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI G++Q+G   +AL+ F  M    ++P++ T V V+ A +   ++  A     ++ +  
Sbjct: 450 MITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKY 509

Query: 472 FEKNVFV-MTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
             K V      ++DM+ + G +  A      MN E     W+  I G  +HG
Sbjct: 510 KIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHG 561


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/651 (39%), Positives = 378/651 (58%), Gaps = 12/651 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   +V  YAK  +I  A ++FD +P+ D VS+NT+++G+A       A+ L  RM 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           + G   D  T+  ++ A  +   + + K +H +++  GFDS  +V+ A V  Y+K G + 
Sbjct: 133 KLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A  VF GM   R+ VSWNSMI AY +     +A+ ++++M+ +G +    T+   L+A 
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD---IFSKLQGKTLV 407
             L  L  G   H  L +     +  + + LI  YSKC   D   D   +F ++    LV
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310

Query: 408 SWNAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            WN MI GY+ N  ++E A+  F +M+    +PD  + V V  A + LS     K IH L
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370

Query: 467 VIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            I+S    N + V  ALI +Y K G +  AR +FD M E +  ++N MI GY  HG G  
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ L+ +ML+    PN ITF+  +SAC+H G V+EG  YF ++K+ + IEP  +HY  M+
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG+L EA  FI  MP +PG   + A+LGAC+ HKN+ L E+AAN L  + P    
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +V+LAN+YA A  W+++A VR  M  K ++K PGCS +E+K + H F +    HP  + 
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610

Query: 706 IYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           +  +LE ++ ++K  GYV D         +  +  +E  L  HSEKLA+AFGL+++  G 
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            + + KNLR+CGDCHNA K++S V GREIIVRD  RFHCFK+G CSCGDYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 217/486 (44%), Gaps = 51/486 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +V  + K + +  A ++F+ IP      Y+T++ GYA       A+    RMR       
Sbjct: 80  IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + L+  C D   +   K++H   +  GF          V  Y+K G + EA  +F 
Sbjct: 140 GFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197

Query: 198 RMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
            M E RD VSWN+++  + Q+     AL L   M  +G + D  T+ S+L A+ ++  L 
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE---TARLVFDGMKSRNVVSWNSMIA 313
            G+  HG  ++AGF    +V + L+D Y+KCG  +    +  VF  + S ++V WN+MI+
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317

Query: 314 AYVEGGN-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
            Y       EEA++ F++M   G  P + + +    AC++L    +   +H L  +  + 
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377

Query: 373 TD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           ++ +S+ N+LIS+Y K   +  A  +F ++     VS+N MI GYAQ+G   EAL  + +
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M    I P+  T V+V+ A A                                    CG 
Sbjct: 438 MLDSGIAPNKITFVAVLSACAH-----------------------------------CGK 462

Query: 492 VGTARALFDMMNER-----HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           V   +  F+ M E          ++ MID  G  G  + A    + M   P KP  + + 
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWA 519

Query: 547 CAISAC 552
             + AC
Sbjct: 520 ALLGAC 525



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 186/379 (49%), Gaps = 8/379 (2%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           S L+   C  +  ++++    +  G           V+ + K   L +A  VF  + +  
Sbjct: 144 SGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           D + +++M+  Y +      A++    M +      ++    +L     +  +  G++ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY---KMFDRMPERDLVSWNTIVAGFAQN- 217
           G+LI  GF  +    +G+++ Y+KCG  +  Y   K+F  +   DLV WNT+++G++ N 
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNV 276
             +E A+    +M   G R D  + V +  A +N+ S    K +HG A+++   S  ++V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           + AL+ +Y K G ++ AR VFD M   N VS+N MI  Y + G+  EA+ ++Q+MLD G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443

Query: 337 EPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            P  +T +  L ACA  G ++ G  + + + +  K+  +    + +I +  +  K++ A 
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503

Query: 396 DIFSKLQGKT-LVSWNAMI 413
                +  K   V+W A++
Sbjct: 504 RFIDAMPYKPGSVAWAALL 522



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 202/485 (41%), Gaps = 75/485 (15%)

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--------- 289
           F T   +L        L  GK++H   +++   S   +S   V++Y+KCGR         
Sbjct: 8   FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 290 ----------------------VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
                                 +  AR +FD +   + VS+N++I+ Y +      AM +
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F++M   G E    T+   + AC D  DL + +  H         +  S+ N+ ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQL--HCFSVSGGFDSYSSVNNAFVTYYSK 185

Query: 388 CKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
              +  A  +F  + + +  VSWN+MI+ Y Q+    +AL  + +M  K  K D FT+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG---TARALFDMMN 503
           V+ AL  L  +   +  H  +I++ F +N  V + LID Y+KCG       +  +F  + 
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305

Query: 504 ERHVTTWNVMIDGYG-THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
              +  WN MI GY     L + AV+ F +M     +P+D +F+C  SACS+     +  
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP----------------- 605
                  K +     +    A++ L  ++G L +A     +MP                 
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425

Query: 606 -----------------IEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGG 645
                            I P    F A+L AC     V+ G++  N +   F+++P+   
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485

Query: 646 YHVLL 650
           Y  ++
Sbjct: 486 YSCMI 490


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 364/609 (59%), Gaps = 41/609 (6%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV--ETARLVFDG 299
           +VS+L    ++  +   K VH +  R G +    V   L+    K         RLVF  
Sbjct: 42  LVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++  N   W ++I  Y   G   E++ ++  M  QG+ P + T    L AC+   D+  G
Sbjct: 99  VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158

Query: 360 IFVHKLLDQLK-LGTDVSMTNSLISMYSKC-----------KKVDR-------------- 393
             VH     +   G+D+ + N+LI MY KC           + +DR              
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAK 218

Query: 394 ------AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
                 A+++F  L  K +V+W AM+ GYAQN R  EAL  F +M++  +K D  T+V V
Sbjct: 219 VGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGV 278

Query: 448 IPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           I A A+L   +YA W+  +  +S F    NV V +ALIDMYAKCG+V  A  +F+ M ER
Sbjct: 279 ISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEER 338

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
           +V +++ MI G+  HGL  AA+ELF++ML+   KPN +TF+  ++ACSH+G+VE+G   F
Sbjct: 339 NVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLF 398

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             +++ +G+ P  DHY  MVDLLGRAGRL EA + ++ MP+ P   V+GA+LGAC+IH N
Sbjct: 399 AMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGN 458

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
            ++ + AA+ LFEL+P+  G ++LL+NIYA+A  WD ++KVR +M  KGL+K PGCS VE
Sbjct: 459 PDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVE 518

Query: 686 LKNE-VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSS 743
            K   +H F++G   HP+S+ I   LE L+D +K  GY P+ +S+ +D+ D  ++ LL S
Sbjct: 519 GKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMS 578

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLA+AFGLL ++ G TI I KNLR+C DCH+     S +TGREI+VRD  RFH F++
Sbjct: 579 HSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRD 638

Query: 804 GVCSCGDYW 812
           G CSCG++W
Sbjct: 639 GRCSCGNFW 647



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 72/442 (16%)

Query: 28  LSQRAYIPSRIYRHPSAL------LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSL 81
           L  +++IP  + +    L      +L  CT + +++++   I + GL        KL+  
Sbjct: 21  LQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRT 80

Query: 82  FCKYNSLSDA--ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
             K +   D     VF+ +      L+  +++GYA      ++V     MR   + PV +
Sbjct: 81  LTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSF 140

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQ-LIVNGFSLDLFAMTGVVNMYAKCG----------- 187
            +T LLK C    ++  G+++H Q +++ GF  DL+    +++MY KCG           
Sbjct: 141 TFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDE 200

Query: 188 --------------------QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
                                +E A ++FD +P +D+V+W  +V G+AQN     AL++ 
Sbjct: 201 MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVF 260

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV--STALVDMYA 285
            RM   G + D +T+V ++ A A +G+ +    V   A ++GF    NV   +AL+DMYA
Sbjct: 261 ERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYA 320

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG VE A  VF+ M+ RNV S++SMI  +   G    AM +F +ML   ++P  VT + 
Sbjct: 321 KCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIG 380

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L AC+  G +E+G                     L +M  +C  V  + D ++      
Sbjct: 381 VLTACSHAGMVEQG-------------------QQLFAMMEECHGVAPSEDHYA------ 415

Query: 406 LVSWNAMILGYAQNGRVNEALN 427
                 M+    + GR+ EALN
Sbjct: 416 -----CMVDLLGRAGRLEEALN 432



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 187/418 (44%), Gaps = 42/418 (10%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK--MFDRMPE 201
           L+ V      I + K++H  +   G     F +  ++    K     + Y   +F ++  
Sbjct: 42  LVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEY 101

Query: 202 RDLVSWNTIVAGFAQNG-FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +   W  ++ G+A  G F E  L L   M  +G      T  ++L A +    + +G+ 
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVL-LYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQ 160

Query: 261 VHGYAMR-AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
           VH   +   GF S + V   L+DMY KCG +     VFD M  R+V+SW S+I AY + G
Sbjct: 161 VHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVG 220

Query: 320 N-------------------------------PEEAMRIFQKMLDQGVEPTNVTIMEALH 348
           N                               P EA+ +F++M   GV+   VT++  + 
Sbjct: 221 NMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVIS 280

Query: 349 ACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           ACA LG  +   +V  + +Q   G  ++V + ++LI MY+KC  V+ A  +F +++ + +
Sbjct: 281 ACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNV 340

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
            S+++MI+G+A +G    A+  F +M    IKP+  T + V+ A +   ++   + + A+
Sbjct: 341 YSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAM 400

Query: 467 VIRSC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
            +  C     +      ++D+  + G +  A  L  MM    H   W  ++     HG
Sbjct: 401 -MEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG 457



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSV------IRYAKWIHALVIRSCFEKNVFVMTAL 482
           +C++++++  P S      I     +SV      I   K +HA + R   E+  FV+  L
Sbjct: 18  YCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKL 77

Query: 483 IDMYAKCGAV--GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           +    K         R +F  +   +   W  +I GY   G    +V L+N M      P
Sbjct: 78  LRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGP 137

Query: 541 NDITFLCAISACSHSGLVEEG--IHYFTSLKKDYG 573
              TF   + ACS +  V  G  +H  T L   +G
Sbjct: 138 VSFTFTALLKACSAALDVNLGRQVHTQTILIGGFG 172


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/560 (41%), Positives = 357/560 (63%), Gaps = 9/560 (1%)

Query: 261 VHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
           +H  A+R+G F S    ++AL+ MY  C R   AR  FD +   N V   +M + YV   
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174

Query: 320 NPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
               ++ +F+ M+  D          + A  A A + D      +H L+ ++    +  +
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGV 234

Query: 378 TNSLISMYSK--CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS- 434
            N+++  Y+K   + ++ A  +F  ++ + +VSWN+MI  YAQNG   EA+  + KM + 
Sbjct: 235 VNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293

Query: 435 -KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
              IK ++  + +V+ A A    I+  K IH  V+R   E+NV+V T+++DMY+KCG V 
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A   F  + E+++ +W+ MI GYG HG G+ A+E+F +M     +PN ITF+  ++ACS
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GL++EG +++ ++K+++GIE  ++HYG MVDLLGRAG L+EA+  I++M ++P   ++
Sbjct: 414 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 473

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+L AC+IHKNVEL E +  RLFELD    GY+VLL+NIYA A MW  + ++R +++ +
Sbjct: 474 GALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTR 533

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K PG S  ELK +++ FY G   HPQ   IY++LE L++ ++ AGYVP+T S+ HD+
Sbjct: 534 RIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDL 593

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E+ L  HSEKLA+AF L+NS P S IHI KNLRVC DCH A K+I+ +T REII+
Sbjct: 594 DEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIII 653

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD+ RFH FK+G+CSC DYW
Sbjct: 654 RDLQRFHHFKDGLCSCRDYW 673



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 184/361 (50%), Gaps = 10/361 (2%)

Query: 62  LIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD 120
           L ++SGL     +  + L+ ++   +   DA R F+ IPD    +   M  GY +   + 
Sbjct: 118 LALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVY 177

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAMTG 178
            ++     M   D A VV     L+          RG    +H  +   GF  +   +  
Sbjct: 178 HSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNT 237

Query: 179 VVNMYAKCGQ--IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR- 235
           +++ YAK G   +E A K+FD M ERD+VSWN+++A +AQNG +  A+ L ++M   G  
Sbjct: 238 MLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGG 296

Query: 236 -RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            + + + + ++L A A+ G+++ GK +H   +R G +  V V T++VDMY+KCGRVE A 
Sbjct: 297 IKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMAS 356

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
             F  +K +N++SW++MI  Y   G  +EA+ IF +M   G+ P  +T +  L AC+  G
Sbjct: 357 RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG 416

Query: 355 DLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAM 412
            L+ G + +  + Q   +   V     ++ +  +   +D A  +  +++ K   + W A+
Sbjct: 417 LLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGAL 476

Query: 413 I 413
           +
Sbjct: 477 L 477



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 101/174 (58%), Gaps = 4/174 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L  C   G I+ GK IH Q++  G   +++  T +V+MY+KCG++E A + F ++ E++
Sbjct: 307 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 366

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           ++SW+ ++ G+  +G  + AL++ T M   G R ++IT +S+L A ++ G L  G+  + 
Sbjct: 367 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN 426

Query: 264 YAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
            AM+   G ++ V     +VD+  + G ++ A  +   MK + +   W ++++A
Sbjct: 427 -AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 2/178 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +RI   +++ GL +     T +V ++ K   +  A+R F  I +K    +  M+ GY   
Sbjct: 321 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 380

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFA 175
               +A+     M+   + P    +  +L  C   G +  G+  +  +    G    +  
Sbjct: 381 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 440

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
              +V++  + G ++EAY +   M  + D   W  +++    +   ELA   V R+ E
Sbjct: 441 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 498


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/651 (38%), Positives = 372/651 (57%), Gaps = 38/651 (5%)

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P  + + +N+++   +++G     +    R+   G R D I+   IL AV+ V +L  G 
Sbjct: 75  PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGM 134

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HG+A +    S   V T L+DMYA CGR+  AR VFD M  R+VV+WN+MI  Y   G
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE--RGIFVHKLLDQLKLGT---- 373
             +EA ++F++M D  V P  + +   + AC   G++   R I+   + + +++ T    
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLT 254

Query: 374 ------------DVSM-------------TNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
                       D++M             + +++S YSK  ++D A  IF + + K LV 
Sbjct: 255 ALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVC 314

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W  MI  YA++    EAL  F +M    IKPD  TM+SVI A   L  +  AKW+H    
Sbjct: 315 WTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTH 374

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
            +  E  + +  ALI+MYAKCG +  AR +F+ M  R+V +W+ MI+ +  HG    ++ 
Sbjct: 375 LNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLS 434

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF +M +   +PN++TF+  +  CSHSGLVEEG   F S+  +Y I P ++HYG MVDL 
Sbjct: 435 LFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLF 494

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRA  L EA + I+ MP+ P + ++G+++ AC++H  +ELGE AA R+ +L+PD  G  V
Sbjct: 495 GRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALV 554

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           L++NIYA    WD +  +R IMEKK + K  G S ++L  + H F  G  +H QS  IYT
Sbjct: 555 LMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYT 614

Query: 709 FLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLN----SSPGS-- 761
            L  ++ ++K AGYVPD  S+  DVE+  +++L+  HSEKLA+ FGL+N       GS  
Sbjct: 615 KLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCG 674

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLRVC DCH   K +S V   EIIVRD  RFH +K+G+CSC DYW
Sbjct: 675 VIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 269/537 (50%), Gaps = 72/537 (13%)

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
           P+P+ +  +++++L+  ++       + F  R+R+        ++  +LK    V  +  
Sbjct: 75  PLPESI--VFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFE 132

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G E+HG         D F  TG+++MYA CG+I  A  +FD M +RD+V+WNT++  + +
Sbjct: 133 GMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCR 192

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY------------ 264
            G  + A  L   M +     D + + +I+ A    G++R  +A++ +            
Sbjct: 193 FGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHL 252

Query: 265 -----AMRAGFD------------SIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNV 305
                 M AG              S+ N  VSTA+V  Y+K GR++ AR++FD  + +++
Sbjct: 253 LTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDL 312

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V W +MI+AY E  +P+EA+R+F++M   G++P  VT++  + AC +LG L++  +VH+ 
Sbjct: 313 VCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRY 372

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
                L + + + N+LI+MY+KC  +D A D+F K+  + +VSW++MI  +A +G  +++
Sbjct: 373 THLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDS 432

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L+ F +M+ +N++P+  T V V+   +   ++   K I A +       + + +T  I+ 
Sbjct: 433 LSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT------DEYNITPKIEH 486

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y                          M+D +G   L + A+E+   M   P  PN + +
Sbjct: 487 YG------------------------CMVDLFGRANLLREALEVIESM---PMAPNVVIW 519

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
              +SAC   G +E G     + K+   +EP  DH GA+V L+         WD+++
Sbjct: 520 GSLMSACRVHGELELGE---LAAKRILKLEP--DHDGALV-LMSNIYAREYRWDYVR 570


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/708 (35%), Positives = 405/708 (57%), Gaps = 14/708 (1%)

Query: 26  HTLSQRAYIPSRIYRHPSA---------LLLEVCTSLKELR--RILPLIIKSGLCDQHLF 74
           H L+   Y+  +++ HPS+          +++ C +L  L   R++    ++   D+ ++
Sbjct: 126 HRLAVLFYV--KMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMY 183

Query: 75  -QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
             + L+ ++     L  A  VF+ + ++   L++ M+ GY K   +  AV     MR   
Sbjct: 184 VGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASG 243

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
             P        L VC    ++  G ++H   +  G   ++     +V+MYAKC  +EEA+
Sbjct: 244 CDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAW 303

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++F  MP  DLV+WN +++G  QNG  + AL L   M + G + D +T+ S+LPA+  + 
Sbjct: 304 RLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             + GK +HGY +R      V + +ALVD+Y KC  V  A+ VFD  KS +VV  ++MI+
Sbjct: 364 GFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMIS 423

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            YV     E A+++F+ +L  G++P  V +   L ACA +  +  G  +H  + +     
Sbjct: 424 GYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEG 483

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
              + ++L+ MYSKC ++D +  +FSK+  K  V+WN+MI  +AQNG   EAL+ F +M 
Sbjct: 484 RCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMI 543

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + +K ++ T+ S++ A A L  I Y K IH ++I+     ++F  +ALIDMY KCG + 
Sbjct: 544 MEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLE 603

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F+ M E++  +WN +I  YG HGL K +V+L   M E   K + +TFL  ISAC+
Sbjct: 604 LALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACA 663

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+G V+EG+  F  + ++Y IEP ++H   MVDL  RAG+L++A  FI  MP +P   ++
Sbjct: 664 HAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIW 723

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+L AC++H+NVEL E A+  LF+LDP   GY+VL++NI A A  WD ++K+R +M+ K
Sbjct: 724 GALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDK 783

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
            +QK PG S V++ N  H F +    HP S+ IY  L++LI E+K  G
Sbjct: 784 KVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEG 831



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 254/492 (51%), Gaps = 17/492 (3%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA------MTGVVNMYAKC 186
           + +P  Y    LL+ C     +  G  IH + + +G  LD          T +V MY   
Sbjct: 31  NASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGL-LDAAGPGPAALQTRLVGMYVLA 89

Query: 187 GQIEEAYKMFDRMPERDL---VSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFIT 241
            +  +A  +F  +P       + WN ++ GF   G   LA+    +M  H    R D  T
Sbjct: 90  RRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHT 149

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +  ++ + A +G+L +G+ VH      G D  + V +AL+ MYA  G ++ AR VFDGM 
Sbjct: 150 LPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMD 209

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            R+ V WN M+  YV+ G+   A+ +F+ M   G +P   T+   L  CA   DL  G+ 
Sbjct: 210 ERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ 269

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           +H L  +  L  +V++ N+L+SMY+KC+ ++ A  +F  +    LV+WN MI G  QNG 
Sbjct: 270 LHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGL 329

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
           V++AL  FC M+   ++PDS T+ S++PAL EL+  +  K IH  ++R+C   +VF+++A
Sbjct: 330 VDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSA 389

Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
           L+D+Y KC  V  A+ +FD      V   + MI GY  + + +AAV++F  +L    KPN
Sbjct: 390 LVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPN 449

Query: 542 DITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
            +     + AC+    +  G  +H +  LK  Y     ++   A++D+  + GRL+ +  
Sbjct: 450 AVMVASTLPACASMAAMRIGQELHGYV-LKNAYEGRCYVE--SALMDMYSKCGRLDLSHY 506

Query: 600 FIQKMPIEPGIT 611
              KM  +  +T
Sbjct: 507 MFSKMSAKDEVT 518


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/556 (41%), Positives = 345/556 (62%), Gaps = 2/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH   + A +   V + T LV MY +CG ++ AR V D M  R+VVSW +MI+ Y +
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                EA+ +F KML  G  P   T+   L +C+    + +G  VH LL +    + + +
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 148

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +SL+ MY+K + +  A  +F  L  + +VS  A+I GYAQ G   EAL+ F ++ S+ +
Sbjct: 149 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 208

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + +  T  +++ AL+ L+ + Y K +HAL++R      V +  +LIDMY+KCG +  +R 
Sbjct: 209 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 268

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD M ER V +WN M+ GYG HGLG   + LF K L    KP+ +T L  +S CSH GL
Sbjct: 269 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGL 327

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+EG+  F ++ K+        HYG ++DLLGR+GRL +A + I+ MP E   +++G++L
Sbjct: 328 VDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GAC++H NV +GE  A +L E++P+  G +V+L+NIYAAA MW  + KVR +M +K + K
Sbjct: 388 GACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTK 447

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S + L   +H+F+S    HP  K I   ++ +  +IKAAG+VPD + + HDV+D  
Sbjct: 448 EPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQ 507

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E +L  HSEKLAI FGL+N+ PG TI + KNLR+C DCHN  K++S V  REI +RD +
Sbjct: 508 KERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKN 567

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH   +G C+CGDYW
Sbjct: 568 RFHLLTHGNCTCGDYW 583



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 227/421 (53%), Gaps = 10/421 (2%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           + Y   +  C +   +  G+++H ++I   +   +F  T +V MY +CG +++A  + DR
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPER +VSW T+++G++Q      ALDL  +M   G   +  T+ ++L + +   S+  G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K VH   ++  F+S + V ++L+DMYAK   ++ AR VFD +  R+VVS  ++I+ Y + 
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+ +F+++  +G++  +VT    + A + L  L+ G  VH L+ + +L   V++ 
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 250

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSLI MYSKC K+  +  +F  +  +++VSWNAM++GY ++G  +E ++ F K   K +K
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVK 309

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA----LIDMYAKCGAVGT 494
           PDS T+++V+   +   ++     I   V++   E++  + T     +ID+  + G +  
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEK 366

Query: 495 ARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISAC 552
           A  L + M  E   + W  ++     H        +  K+LE  P    +   L  I A 
Sbjct: 367 ALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAA 426

Query: 553 S 553
           +
Sbjct: 427 A 427



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 165/285 (57%), Gaps = 1/285 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T+LV+++ +  +L DA  V + +P++    + TM+ GY++     +A+   I+M      
Sbjct: 49  TRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI 108

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y    +L  C     I +GK++H  L+   F   +F  + +++MYAK   I+EA ++
Sbjct: 109 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 168

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD +PERD+VS   I++G+AQ G  E ALDL  +++ EG + + +T  +++ A++ + SL
Sbjct: 169 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 228

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GK VH   +R      V +  +L+DMY+KCG++  +R VFD M  R+VVSWN+M+  Y
Sbjct: 229 DYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGY 288

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              G   E + +F K L + V+P +VT++  L  C+  G ++ G+
Sbjct: 289 GRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGL 332



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 145/283 (51%), Gaps = 24/283 (8%)

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           A+ AC +   L  G  VH  +   +    V +   L++MY +C  +D A ++  ++  ++
Sbjct: 16  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW  MI GY+Q  R  EAL+ F KM      P+ +T+ +V+ + +    I   K +H+
Sbjct: 76  VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
           L++++ FE ++FV ++L+DMYAK   +  AR +FD + ER V +   +I GY   GL + 
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACS-----------HSGLVEEGIHYFTSLKKDYGI 574
           A++LF ++     + N +TF   ++A S           H+ ++ + + +F +L+     
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN---- 251

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
                   +++D+  + G+L  +      M +E  +  + AML
Sbjct: 252 --------SLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAML 285



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 159/327 (48%), Gaps = 29/327 (8%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C+   S+ + +++  L++K+         + L+ ++ K  ++ +A RVF+ +P+
Sbjct: 115 ATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPE 174

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY-NYTYLLKVCGDVGEIRRGKE 159
           +       ++ GYA+   LD+    L R  Y +     +  +T L+     +  +  GK+
Sbjct: 175 RDVVSCTAIISGYAQ-KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 233

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  ++       +     +++MY+KCG++  + ++FD M ER +VSWN ++ G+ ++G 
Sbjct: 234 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 293

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
               + L   +H+E  + D +T++++L   ++ G +  G  +        FD++V   +A
Sbjct: 294 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDI--------FDTVVKEQSA 344

Query: 280 L---------VDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQ 329
           L         +D+  + GR+E A  + + M   +  S W S++ A     N      + Q
Sbjct: 345 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQ 404

Query: 330 KMLDQGVEPTNV---TIMEALHACADL 353
           K+L+  +EP N     I+  ++A A +
Sbjct: 405 KLLE--MEPENAGNYVILSNIYAAAGM 429



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 16/267 (5%)

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           + I A  E   +   + +HA +I + +   VF+ T L+ MY +CGA+  AR + D M ER
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
            V +W  MI GY        A++LF KML     PN+ T    +++CS    + +G    
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
           + L K    E  M    +++D+  ++  + EA      +P    ++    + G    +  
Sbjct: 135 SLLVKT-NFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISG----YAQ 189

Query: 626 VELGEKAANRLFELDPDEGGY--HVLLANIYAAASMWDKL---AKVRTIMEKKGLQKTPG 680
             L E+A + LF     EG    HV    +  A S    L    +V  ++ +K L     
Sbjct: 190 KGLDEEALD-LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP---- 244

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIY 707
              V L+N +   YS   K   S+R++
Sbjct: 245 -FFVALQNSLIDMYSKCGKLLYSRRVF 270


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/666 (37%), Positives = 390/666 (58%), Gaps = 13/666 (1%)

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           GE+  GK +H + +V     D+     ++ +Y KCG++  A ++FD MP R+ VS N ++
Sbjct: 30  GELSLGKAVHAR-VVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDF----ITIVSILPAVANVGSLRIGKAVHGYAMR 267
           +G+A +G    AL L+       R  DF      + S + A A+V S  +G+  HGYA++
Sbjct: 89  SGYASSGRHRDALALL-------RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIK 141

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           AG      V +A++ MY +C  ++ A  VFD + S NV ++NSMI  +++ G  + +  I
Sbjct: 142 AGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSI 201

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
            + M+    +  +V+ +  L  CA   ++  G  VH    + +L  +V + ++L+ MY K
Sbjct: 202 VRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGK 261

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C     A  +F  L  K +VSW A++  Y QN    +AL  F  M  + ++P+ FT    
Sbjct: 262 CDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVA 321

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + + A L+ ++    + A  +++     + V  AL++MY+K G+V  AR +F  M  R V
Sbjct: 322 LNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDV 381

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN +I GY  HG  + A+E F+ ML     P+ +TF+  +SAC+  GLV+EG +Y   
Sbjct: 382 VSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNI 441

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + K+ G++P  +HY  MV LL R GRL+EA  FI+   I   +  + ++L +C++++N  
Sbjct: 442 MMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYG 501

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG + A ++F+L P + G +VLL+N+YA A+ WD + KVR +M + G++K PG S +++ 
Sbjct: 502 LGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVG 561

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSE 746
           +EVH F S   KHP  ++I   L+ LID+IK  GYVP+   ++HDVED  +E  L  HSE
Sbjct: 562 SEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSE 621

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           KLA+AFGL+ +  G  I I KN+R+C DCH A K ISL TGR I+VRD  RFHC ++GVC
Sbjct: 622 KLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVC 681

Query: 807 SCGDYW 812
           SC DYW
Sbjct: 682 SCDDYW 687



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 195/382 (51%), Gaps = 3/382 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
             L++L+ K   L  A +VF+ +P +     + ++ GYA      DA++ L   R  D  
Sbjct: 54  NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL---RVADFG 110

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              Y  +  +     V     G++ HG  I  G +   +  + V++MY +C  ++EA K+
Sbjct: 111 LNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKV 170

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD +   ++ ++N+++ GF   G  + +  +V  M     + D ++ V++L   A+   +
Sbjct: 171 FDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEV 230

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G  VH  A++   +  V V +ALVDMY KC     A  VF+ +  +N+VSW +++ AY
Sbjct: 231 VLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAY 290

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            +    E+A+++F  M  +GV P   T   AL++CA L  L+ G  +     +      +
Sbjct: 291 TQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLL 350

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+L++MYSK   V+ A  +F  +  + +VSWN++I+GYA +GR  EA+  F  M   
Sbjct: 351 PVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFA 410

Query: 436 NIKPDSFTMVSVIPALAELSVI 457
              P   T + V+ A A+L ++
Sbjct: 411 EEVPSYVTFIGVLSACAQLGLV 432



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 183/357 (51%), Gaps = 12/357 (3%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           IK+GL +     + ++ ++C+   + +A +VF+ +       +++M+ G+     +D + 
Sbjct: 140 IKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGST 199

Query: 124 SFLIRM-----RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           S +  M     ++D V+     Y  +L  C    E+  G ++H Q +     L+++  + 
Sbjct: 200 SIVRSMVRNVGQWDHVS-----YVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSA 254

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +V+MY KC    EA ++F+ +PE+++VSW  I+  + QN   E AL L   M  EG R +
Sbjct: 255 LVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPN 314

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T    L + A + +L+ G A+    M+ G   ++ V  AL++MY+K G VE AR VF 
Sbjct: 315 EFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFL 374

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+VVSWNS+I  Y   G   EAM  F  ML     P+ VT +  L ACA LG ++ 
Sbjct: 375 SMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDE 434

Query: 359 GI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD-IFSKLQGKTLVSWNAMI 413
           G  +++ ++ ++ +         ++ +  +  ++D A   I S   G  +V+W +++
Sbjct: 435 GFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLL 491


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/660 (37%), Positives = 364/660 (55%), Gaps = 39/660 (5%)

Query: 192 AYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           A  +F  +P   + + +N  +   +++      +    R+   G R D  + + IL AV+
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            V +L  G  +HG A +        V T  +DMYA CGR+  AR VFD M  R+VV+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MI  Y   G  +EA ++F++M D  V P  + +   + AC   G++     +++ L +  
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 371 LGTDVSMTNSLISMY-------------------------------SKCKKVDRAADIFS 399
           +  D  +  +L++MY                               SKC ++D A  IF 
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           + + K LV W  MI  Y ++    EAL  F +M    IKPD  +M SVI A A L ++  
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
           AKW+H+ +  +  E  + +  ALI+MYAKCG +   R +F+ M  R+V +W+ MI+    
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG    A+ LF +M +   +PN++TF+  +  CSHSGLVEEG   F S+  +Y I P ++
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HYG MVDL GRA  L EA + I+ MP+   + ++G+++ AC+IH  +ELG+ AA R+ EL
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +PD  G  VL++NIYA    W+ +  +R +ME+K + K  G S ++   + H F  G  +
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           H QS  IY  L+ ++ ++K AGYVPD  S+  DVE+  +++L+  HSEKLA+ FGL+N  
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 662

Query: 759 PGS------TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
                     I I KNLRVC DCH   K +S V  REIIVRD  RFHC+KNG+CSC DYW
Sbjct: 663 KEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 269/550 (48%), Gaps = 79/550 (14%)

Query: 91  AARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           A  VF  IP   +++ ++  L+  ++ +     + F  R+R+       +++  +LK   
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            V  +  G E+HG         D F  TG ++MYA CG+I  A  +FD M  RD+V+WNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY----- 264
           ++  + + G  + A  L   M +     D + + +I+ A    G++R  +A++ +     
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 265 ------------AMRAGFD------------SIVN--VSTALVDMYAKCGRVETARLVFD 298
                        M AG              S+ N  VSTA+V  Y+KCGR++ A+++FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
             + +++V W +MI+AYVE   P+EA+R+F++M   G++P  V++   + ACA+LG L++
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
             +VH  +    L +++S+ N+LI+MY+KC  +D   D+F K+  + +VSW++MI   + 
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           +G  ++AL+ F +M+ +N++P+  T V V+   +   ++   K I A             
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA------------- 469

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTT----WNVMIDGYGTHGLGKAAVELFNKML 534
                                 M +E ++T     +  M+D +G   L + A+E+   M 
Sbjct: 470 ---------------------SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM- 507

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
             P   N + +   +SAC   G +E G     + K+   +EP  DH GA+V L+      
Sbjct: 508 --PVASNVVIWGSLMSACRIHGELELGKF---AAKRILELEP--DHDGALV-LMSNIYAR 559

Query: 595 NEAWDFIQKM 604
            + W+ ++ +
Sbjct: 560 EQRWEDVRNI 569



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/412 (20%), Positives = 180/412 (43%), Gaps = 34/412 (8%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +IL  ++   SL   K +H + +R   +  +N     + + +    +  A  VF  + S 
Sbjct: 14  TILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSP 73

Query: 304 -NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
              + +N  +        P   +  +Q++   G      + +  L A + +  L  G+ +
Sbjct: 74  PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H +  ++    D  +    + MY+ C +++ A ++F ++  + +V+WN MI  Y + G V
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           +EA   F +M+  N+ PD   + +++ A      +RY + I+  +I +    +  ++TAL
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253

Query: 483 IDMYA-------------------------------KCGAVGTARALFDMMNERHVTTWN 511
           + MYA                               KCG +  A+ +FD   ++ +  W 
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI  Y      + A+ +F +M     KP+ ++    ISAC++ G++++   +  S    
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHV 372

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            G+E  +    A++++  + G L+   D  +KMP    +  + +M+ A  +H
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/556 (41%), Positives = 345/556 (62%), Gaps = 2/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH   + A +   V + T LV MY +CG ++ AR V D M  R+VVSW +MI+ Y +
Sbjct: 61  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                EA+ +F KML  G  P   T+   L +C+    + +G  VH LL +    + + +
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +SL+ MY+K + +  A  +F  L  + +VS  A+I GYAQ G   EAL+ F ++ S+ +
Sbjct: 181 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 240

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + +  T  +++ AL+ L+ + Y K +HAL++R      V +  +LIDMY+KCG +  +R 
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 300

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD M ER V +WN M+ GYG HGLG   + LF K L    KP+ +T L  +S CSH GL
Sbjct: 301 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGL 359

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+EG+  F ++ K+        HYG ++DLLGR+GRL +A + I+ MP E   +++G++L
Sbjct: 360 VDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 419

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GAC++H NV +GE  A +L E++P+  G +V+L+NIYAAA MW  + KVR +M +K + K
Sbjct: 420 GACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTK 479

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            PG S + L   +H+F+S    HP  K I   ++ +  +IKAAG+VPD + + HDV+D  
Sbjct: 480 EPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQ 539

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E +L  HSEKLAI FGL+N+ PG TI + KNLR+C DCHN  K++S V  REI +RD +
Sbjct: 540 KERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKN 599

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH   +G C+CGDYW
Sbjct: 600 RFHLLTHGNCTCGDYW 615



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 227/421 (53%), Gaps = 10/421 (2%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           + Y   +  C +   +  G+++H ++I   +   +F  T +V MY +CG +++A  + DR
Sbjct: 43  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPER +VSW T+++G++Q      ALDL  +M   G   +  T+ ++L + +   S+  G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K VH   ++  F+S + V ++L+DMYAK   ++ AR VFD +  R+VVS  ++I+ Y + 
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 222

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+ +F+++  +G++  +VT    + A + L  L+ G  VH L+ + +L   V++ 
Sbjct: 223 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 282

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSLI MYSKC K+  +  +F  +  +++VSWNAM++GY ++G  +E ++ F K   K +K
Sbjct: 283 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVK 341

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA----LIDMYAKCGAVGT 494
           PDS T+++V+   +   ++     I   V++   E++  + T     +ID+  + G +  
Sbjct: 342 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEK 398

Query: 495 ARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISAC 552
           A  L + M  E   + W  ++     H        +  K+LE  P    +   L  I A 
Sbjct: 399 ALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAA 458

Query: 553 S 553
           +
Sbjct: 459 A 459



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 165/285 (57%), Gaps = 1/285 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T+LV+++ +  +L DA  V + +P++    + TM+ GY++     +A+   I+M      
Sbjct: 81  TRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI 140

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y    +L  C     I +GK++H  L+   F   +F  + +++MYAK   I+EA ++
Sbjct: 141 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 200

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD +PERD+VS   I++G+AQ G  E ALDL  +++ EG + + +T  +++ A++ + SL
Sbjct: 201 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 260

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GK VH   +R      V +  +L+DMY+KCG++  +R VFD M  R+VVSWN+M+  Y
Sbjct: 261 DYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGY 320

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              G   E + +F K L + V+P +VT++  L  C+  G ++ G+
Sbjct: 321 GRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHGGLVDEGL 364



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 145/283 (51%), Gaps = 24/283 (8%)

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
           A+ AC +   L  G  VH  +   +    V +   L++MY +C  +D A ++  ++  ++
Sbjct: 48  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW  MI GY+Q  R  EAL+ F KM      P+ +T+ +V+ + +    I   K +H+
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 167

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
           L++++ FE ++FV ++L+DMYAK   +  AR +FD + ER V +   +I GY   GL + 
Sbjct: 168 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 227

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACS-----------HSGLVEEGIHYFTSLKKDYGI 574
           A++LF ++     + N +TF   ++A S           H+ ++ + + +F +L+     
Sbjct: 228 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN---- 283

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
                   +++D+  + G+L  +      M +E  +  + AML
Sbjct: 284 --------SLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAML 317



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 159/327 (48%), Gaps = 29/327 (8%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C+   S+ + +++  L++K+         + L+ ++ K  ++ +A RVF+ +P+
Sbjct: 147 ATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPE 206

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY-NYTYLLKVCGDVGEIRRGKE 159
           +       ++ GYA+   LD+    L R  Y +     +  +T L+     +  +  GK+
Sbjct: 207 RDVVSCTAIISGYAQ-KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 265

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  ++       +     +++MY+KCG++  + ++FD M ER +VSWN ++ G+ ++G 
Sbjct: 266 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 325

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
               + L   +H+E  + D +T++++L   ++ G +  G  +        FD++V   +A
Sbjct: 326 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDI--------FDTVVKEQSA 376

Query: 280 L---------VDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQ 329
           L         +D+  + GR+E A  + + M   +  S W S++ A     N      + Q
Sbjct: 377 LLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQ 436

Query: 330 KMLDQGVEPTNV---TIMEALHACADL 353
           K+L+  +EP N     I+  ++A A +
Sbjct: 437 KLLE--MEPENAGNYVILSNIYAAAGM 461



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 16/267 (5%)

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
           + I A  E   +   + +HA +I + +   VF+ T L+ MY +CGA+  AR + D M ER
Sbjct: 47  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
            V +W  MI GY        A++LF KML     PN+ T    +++CS    + +G    
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
           + L K    E  M    +++D+  ++  + EA      +P    ++    + G    +  
Sbjct: 167 SLLVKT-NFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISG----YAQ 221

Query: 626 VELGEKAANRLFELDPDEGGY--HVLLANIYAAASMWDKL---AKVRTIMEKKGLQKTPG 680
             L E+A + LF     EG    HV    +  A S    L    +V  ++ +K L     
Sbjct: 222 KGLDEEALD-LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP---- 276

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIY 707
              V L+N +   YS   K   S+R++
Sbjct: 277 -FFVALQNSLIDMYSKCGKLLYSRRVF 302


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/663 (36%), Positives = 379/663 (57%), Gaps = 49/663 (7%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCG-----QIEEAYKMFDRMPERDLVSWNTIVA 212
           K+ H  ++  G   D +    +V  YA          E + ++FD + + ++  WN ++ 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
              +N     A+ L   M     R +  T  ++L A ++ G +  G  VH + ++ G   
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 273 IVNVSTALVDMYAKCGR-VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             ++ ++ + MYA  GR VE  R++ D     + V WN+MI  Y+  G  E A  +F+ M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
            D+ +                                      +S  N++IS +S+C  V
Sbjct: 232 PDRSM--------------------------------------ISTWNAMISGFSRCGMV 253

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           + A + F +++ +  +SW+AMI GY Q G   EAL  F +M+ + I+P  F + SV+ A 
Sbjct: 254 EVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 313

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L  +   +WIH    R+  + +  + T+L+DMYAKCG +  A  +F+ M+ + V++WN
Sbjct: 314 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 373

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI G   HG  + A++LF+KM      PN+ITF+  ++AC+H GLV++G+  F S++K+
Sbjct: 374 AMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 430

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YG+EP ++HYG +VDLLGRAG L EA   +  +P EP   V+GA+LGAC+ H NVELGE+
Sbjct: 431 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER 490

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL-KNEV 690
               L EL+P   G + LL+NIYA A  W+++ +VR +M+++G++ TPG S+++L + EV
Sbjct: 491 VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEV 550

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H F  G   HPQ K IY  L+ + + ++  GY PD + +  D+++  +E  +  HSEKLA
Sbjct: 551 HKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLA 610

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           I FGL+N+SPG+TI I KNLRVC DCH+ATK IS V  REIIVRD  R+H F+NG CSC 
Sbjct: 611 IGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCK 670

Query: 810 DYW 812
           D+W
Sbjct: 671 DFW 673



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 159/315 (50%), Gaps = 16/315 (5%)

Query: 67  GLCDQHLFQT--KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           G+ D+ +  T   ++S F +   +  A   F+ + ++ +  +  M+ GY +     +A+ 
Sbjct: 230 GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALE 289

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
              +M+ + + P  +    +L  C ++G + +G+ IH     N   LD    T +V+MYA
Sbjct: 290 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 349

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG+I+ A+++F++M  +++ SWN ++ G A +G AE A+DL ++M       + IT V 
Sbjct: 350 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVG 406

Query: 245 ILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +L A A+ G ++ G  +   +MR   G +  +     +VD+  + G +  A  V   + +
Sbjct: 407 VLNACAHGGLVQKGLTIFN-SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPT 465

Query: 303 RNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN---VTIMEALHACADLGDLER 358
               + W +++ A  + GN E   R+ + +L+  +EP N    T++  ++A A  G  E 
Sbjct: 466 EPTPAVWGALLGACRKHGNVELGERVGKILLE--LEPQNSGRYTLLSNIYAKA--GRWEE 521

Query: 359 GIFVHKLLDQLKLGT 373
              V KL+ +  + T
Sbjct: 522 VGEVRKLMKERGIKT 536



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL--------FDMMNERHVT 508
           + + K  HAL++R+   ++ ++  +L+  YA    V T R L        FD + + +V 
Sbjct: 48  LHHLKQAHALILRTGHLQDSYIAGSLVKSYAN---VSTNRYLSFESSLRVFDFVRKPNVF 104

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN MI     +     A+ L+ +M+   ++PN  T+   + ACS SG+V EG+     L
Sbjct: 105 LWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHL 164

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            K +G+        + + +    GRL EA   +     E     + AM     I   +  
Sbjct: 165 VK-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAM-----IDGYLRF 218

Query: 629 GE-KAANRLFELDPD 642
           GE +AA  LFE  PD
Sbjct: 219 GEVEAARELFEGMPD 233


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/748 (36%), Positives = 404/748 (54%), Gaps = 16/748 (2%)

Query: 77  KLVSLFCKYNSLSDAARVFEPIPDKL-DALYHTMLKG---YAKFASLDDAVSFLIRMRYD 132
           +++S + +   LS A  +F   P  L DA+  T++ G    A  A   DAVS    M  +
Sbjct: 71  RMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLRE 130

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM-------TGVVNMYAK 185
            VAP       +L +    G       I     ++ F+L L  +         +++ Y K
Sbjct: 131 GVAPDRVTVATVLNLPPASGGTAAAIIIAS---LHPFALKLGLLHSNVVVCNTLLDAYCK 187

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
            G +  A ++F  MP RD V++N ++ G ++ G    ALDL   M  +G      T  ++
Sbjct: 188 HGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTV 247

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L     VG L +G+ VHG   RA   S V V+ +L+D Y+KC  ++  + +F  M  R+ 
Sbjct: 248 LTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDN 306

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VS+N MIA Y         +R+F++M     +   +     L     +  +  G  +H  
Sbjct: 307 VSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQ 366

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L  L L ++  + N+LI MYSKC  +D A   F     KT VSW AMI G  QNG+  EA
Sbjct: 367 LVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEA 426

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  FC MR   + PD  T  S I A + L++I   + +H+ +IRS    +VF  +AL+DM
Sbjct: 427 LQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDM 486

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y KCG +  A   FD M ER+  +WN +I  Y  +G  K A+++F  ML    KP+ +TF
Sbjct: 487 YTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTF 546

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  +SACSH+GL EE + YF  ++ +YGI P  +HY  ++D LGR GR ++  + + +MP
Sbjct: 547 LSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMP 606

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
            E    ++ ++L +C+ H N +L   AA +LF +   +   +V+L+NI+A A  W+  A 
Sbjct: 607 FEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAG 666

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           V+ IM  +GL+K  G S VE+K++V+SF S    +P    I   LE L  E+   GY PD
Sbjct: 667 VKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPD 726

Query: 726 TN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
           T+ ++  V+D ++   L  HSE+LAIAF L+N+ PG+ I + KNL  C DCH+A K +S 
Sbjct: 727 TSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSK 786

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  R+IIVRD  RFH FK+G CSCGDYW
Sbjct: 787 IVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 219/492 (44%), Gaps = 42/492 (8%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE------------------ 201
           +  +++  GF    + +  +++     G++ +A  +FD+MP                   
Sbjct: 21  LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80

Query: 202 ----------------RDLVSWNTIVAGFAQ--NGFAELALDLVTRMHEEGRRGDFITIV 243
                           RD V+W  ++  FA      A  A+ L   M  EG   D +T+ 
Sbjct: 81  QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140

Query: 244 SIL---PAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           ++L   PA     +  I  ++H +A++ G   S V V   L+D Y K G +  AR VF  
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  R+ V++N+M+    + G+  EA+ +F  M  +G+  T  T    L     +GDL  G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH L+ +    ++V + NSL+  YSKC  +D    +F ++  +  VS+N MI GYA N
Sbjct: 261 RQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWN 319

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              +  L  F +M+S +    +    S++     +  I   K IHA ++         V 
Sbjct: 320 RCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVG 379

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            ALIDMY+KCG +  A+  F   N++   +W  MI G   +G  + A++LF  M      
Sbjct: 380 NALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLS 439

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+  TF   I A S+  ++  G    + L +   +  V     A++D+  + G L+EA  
Sbjct: 440 PDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSG-SALLDMYTKCGCLDEALQ 498

Query: 600 FIQKMPIEPGIT 611
              +MP    I+
Sbjct: 499 TFDEMPERNSIS 510



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 153/331 (46%), Gaps = 8/331 (2%)

Query: 42  PSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A LL V  S+  +   ++I   ++  GL  + L    L+ ++ K   L  A   F   
Sbjct: 343 PYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINK 402

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            DK    +  M+ G  +    ++A+     MR   ++P    ++  +K   ++  I  G+
Sbjct: 403 NDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGR 462

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +G    +F+ + +++MY KCG ++EA + FD MPER+ +SWN +++ +A  G
Sbjct: 463 QLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYG 522

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVS 277
            A+ A+ +   M   G + D +T +S+L A ++ G +    K         G        
Sbjct: 523 QAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHY 582

Query: 278 TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG- 335
           + ++D   + GR +  + +   M    + + W+S++ +    GN + A    +K+   G 
Sbjct: 583 SCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGS 642

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLL 366
            + T   I+  + A A  G  E    V K++
Sbjct: 643 TDATPYVILSNIFAKA--GKWEDAAGVKKIM 671


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/663 (36%), Positives = 378/663 (57%), Gaps = 49/663 (7%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCG-----QIEEAYKMFDRMPERDLVSWNTIVA 212
           K+ H  ++  G   D +    +V  YA          E + ++FD + + ++  WN ++ 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
              +N     A+ L   M     R +  T  ++L A ++ G +  G  VH + ++ G   
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             ++ ++ + MYA  GR+  AR + D      + V WN+MI  Y+  G  E A  +F+ M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
            D+ +                                      +S  N++IS +S+C  V
Sbjct: 231 PDRSM--------------------------------------ISTWNAMISGFSRCGMV 252

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           + A + F +++ +  +SW+AMI GY Q G   EAL  F +M+ + I+P  F + SV+ A 
Sbjct: 253 EVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L  +   +WIH    R+  + +  + T+L+DMYAKCG +  A  +F+ M+ + V++WN
Sbjct: 313 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 372

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI G   HG  + A++LF+KM      PN+ITF+  ++AC+H GLV++G+  F S++K+
Sbjct: 373 AMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 429

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YG+EP ++HYG +VDLLGRAG L EA   +  +P EP   V+GA+LGAC+ H NVELGE+
Sbjct: 430 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER 489

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL-KNEV 690
               L EL+P   G + LL+NIYA A  W+++ +VR +M+++G++ TPG S+++L + EV
Sbjct: 490 VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEV 549

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H F  G   HPQ K IY  L+ + + ++  GY PD + +  D+++  +E  +  HSEKLA
Sbjct: 550 HKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLA 609

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           I FGL+N+SPG+TI I KNLRVC DCH+ATK IS V  REIIVRD  R+H F+NG CSC 
Sbjct: 610 IGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCK 669

Query: 810 DYW 812
           D+W
Sbjct: 670 DFW 672



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 158/315 (50%), Gaps = 16/315 (5%)

Query: 67  GLCDQHLFQT--KLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           G+ D+ +  T   ++S F +   +  A   F+ + ++ +  +  M+ GY +     +A+ 
Sbjct: 229 GMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALE 288

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
              +M+ + + P  +    +L  C ++G + +G+ IH     N   LD    T +V+MYA
Sbjct: 289 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 348

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG+I+ A+++F++M  +++ SWN ++ G A +G AE A+DL ++M         IT V 
Sbjct: 349 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNE---ITFVG 405

Query: 245 ILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           +L A A+ G ++ G  +   +MR   G +  +     +VD+  + G +  A  V   + +
Sbjct: 406 VLNACAHGGLVQKGLTIFN-SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPT 464

Query: 303 RNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN---VTIMEALHACADLGDLER 358
               + W +++ A  + GN E   R+ + +L+  +EP N    T++  ++A A  G  E 
Sbjct: 465 EPTPAVWGALLGACRKHGNVELGERVGKILLE--LEPQNSGRYTLLSNIYAKA--GRWEE 520

Query: 359 GIFVHKLLDQLKLGT 373
              V KL+ +  + T
Sbjct: 521 VGEVRKLMKERGIKT 535



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL--------FDMMNERHVT 508
           + + K  HAL++R+   ++ ++  +L+  YA    V T R L        FD + + +V 
Sbjct: 47  LHHLKQAHALILRTGHLQDSYIAGSLVKSYAN---VSTNRYLSFESSLRVFDFVRKPNVF 103

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN MI     +     A+ L+ +M+    +PN  T+   + ACS +G+V EG+     L
Sbjct: 104 LWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHL 163

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            K +G+        + + +    GRL EA   +     E     + AM     I   +  
Sbjct: 164 VK-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAM-----IDGYLRF 217

Query: 629 GE-KAANRLFELDPD 642
           GE +AA  LFE  PD
Sbjct: 218 GEVEAARELFEGMPD 232


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/673 (35%), Positives = 380/673 (56%), Gaps = 73/673 (10%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  LL  C      R  + +H ++++  FS+++F    ++++Y KC  +++A K+
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 196 FDRMPER-------------------------------DLVSWNTIVAGFAQNGFAELAL 224
           FDRMP+R                               D  SWN++V+GFAQ+   E +L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +   +MH E    +  +  S L A A +  L +G  VH    ++ + + V + +AL+DMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KCG V  A  VF GM  RN+V+WNS+I  Y + G   EA+ +F +M+D G+EP  VT+ 
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 345 EALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVD----------- 392
             + ACA L  L+ G+ +H +++   K   D+ + N+L+ MY+KC KV+           
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 393 --------------RAADI------FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                         RAA +      FSK+  + +VSWNA+I GY QNG   EAL  F  +
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE------KNVFVMTALIDMY 486
           + ++I P  +T  +++ A A L+ +   +  H  V++  FE       ++FV  +LIDMY
Sbjct: 373 KRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMY 432

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
            KCG++     +F+ M ER   +WN +I GY  +G G  A+++F KML    KP+ +T +
Sbjct: 433 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 492

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             + ACSH+GLVEEG HYF S++ ++G+ P+ DHY  MVDLLGRAG LNEA + I+ MP+
Sbjct: 493 GVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPV 551

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
            P   V+G++L ACK+H N+E+G+ AA +L E+DP   G +VLL+N+YA    W  + +V
Sbjct: 552 NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRV 611

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R +M ++G+ K PGCS +E+++ VH F      HP  K+IY+ L+ L +++K  GY+PD 
Sbjct: 612 RKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDA 671

Query: 727 NSIHDVEDYVQEN 739
           N   D E Y +++
Sbjct: 672 N---DFEAYDEQS 681



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 176/593 (29%), Positives = 288/593 (48%), Gaps = 94/593 (15%)

Query: 25  KHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR-------RIL------------PLIIK 65
           KH L +  Y+P+     P A LL+ C   +  R       RIL             LI  
Sbjct: 3   KHGLVRDLYLPNS---SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDV 59

Query: 66  SGLCD-----QHLFQ----------TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            G CD     + LF             L+S+  K   L +AAR+F  +P+     +++M+
Sbjct: 60  YGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMV 119

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+A+    ++++ + ++M  +D     Y++   L  C  + ++  G ++H  +  + +S
Sbjct: 120 SGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYS 179

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D++  + +++MY+KCG +  A ++F  M ER+LV+WN+++  + QNG A  AL++  RM
Sbjct: 180 TDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRM 239

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGR 289
            + G   D +T+ S++ A A++ +L+ G  +H   ++   F   + +  ALVDMYAKC +
Sbjct: 240 MDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSK 299

Query: 290 VETARLVFD-------------------------------GMKSRNVVSWNSMIAAYVEG 318
           V  AR VFD                                M  RNVVSWN++IA Y + 
Sbjct: 300 VNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG------ 372
           G  EEA+R+F+ +  + + PT+ T    L ACA+L DL  G   H  +  LK G      
Sbjct: 360 GENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHV--LKQGFEFQSG 417

Query: 373 --TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
             +D+ + NSLI MY KC  ++  + +F K++ +  VSWNA+I+GYAQNG   EAL  F 
Sbjct: 418 AESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 477

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM----TALIDMY 486
           KM     KPD  TM+ V+ A +   ++   +  H     S  E  +  +    T ++D+ 
Sbjct: 478 KMLVCGEKPDHVTMIGVLCACSHAGLVEEGR--HYFF--SMEEHGLIPLKDHYTCMVDLL 533

Query: 487 AKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLE 535
            + G +  A+ L + M        W  ++     HG   +GK A E   K+LE
Sbjct: 534 GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAE---KLLE 583


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/558 (41%), Positives = 343/558 (61%), Gaps = 5/558 (0%)

Query: 259 KAVHGYAMRAGFDSIVNVSTA---LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           + +H +++R G   + N       +  + + C  +  A  +F  +++ N+ +WN+MI  Y
Sbjct: 57  RQIHAFSIRHGV-PLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGY 115

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            E  NP  A+ ++++M    +EP   T    L A A L D+  G  VH +  +    + V
Sbjct: 116 AESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLV 175

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+L+ MY+ C   + A  +F  +  + LV+WN++I GYA NGR NEAL  F +M  +
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            ++PD FTMVS++ A AEL  +   +  H  +++   + N+    AL+D+YAKCG++  A
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 295

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +FD M E+ V +W  +I G   +G GK A+ELF ++      P++ITF+  + ACSH 
Sbjct: 296 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 355

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G+V+EG  YF  +K++YGI P ++HYG MVDLLGRAG + +A +FIQ MP++P   V+  
Sbjct: 356 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC IH ++ LGE A  +L +L+P   G +VLL+N+YA+   W  + KVR  M ++G+
Sbjct: 416 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 475

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNSIHDVED 734
           +KTPG SLVEL+N +H F  G   HPQ++ IY  L  +   +K  GYVP  +N + D+E+
Sbjct: 476 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEE 535

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E  LS HSEK+AIAF L+N++ G  I + KNLRVC DCH A K IS V  REI+VRD
Sbjct: 536 EEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRD 595

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH FK+G CSC DYW
Sbjct: 596 RSRFHHFKDGHCSCKDYW 613



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 205/382 (53%), Gaps = 4/382 (1%)

Query: 36  SRIYRHPSALLLEVCTSLKELRRILPLIIKSG--LCDQHLFQTKLVSLFCKYNSLSDAAR 93
           S I +   ALLL   +S  + R+I    I+ G  L +  + +  + +L    + +S A +
Sbjct: 36  SYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQ 95

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F  I +     ++TM++GYA+  +   A+    +M    + P  + Y +LLK    + +
Sbjct: 96  IFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMD 155

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H   I NGF   +F    +V+MYA CG  E A+K+F+ M ER+LV+WN+++ G
Sbjct: 156 VREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVING 215

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +A NG    AL L   M   G   D  T+VS+L A A +G+L +G+  H Y ++ G D  
Sbjct: 216 YALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGN 275

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           ++   AL+D+YAKCG +  A  VFD M+ ++VVSW S+I      G  +EA+ +F+++  
Sbjct: 276 LHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER 335

Query: 334 QGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           +G+ P+ +T +  L+AC+  G ++ G  +  ++ ++  +   +     ++ +  +   V 
Sbjct: 336 KGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK 395

Query: 393 RAADIFSKLQGK-TLVSWNAMI 413
           +A +    +  +   V W  ++
Sbjct: 396 QAHEFIQNMPMQPNAVVWRTLL 417



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 200/406 (49%), Gaps = 45/406 (11%)

Query: 158 KEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           ++IH   I +G  L    M    +  + + C  +  A+++F ++   ++ +WNT++ G+A
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           ++     AL+L  +MH      D  T   +L A+A +  +R G+ VH  A+R GF+S+V 
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V   LV MYA CG  E+A  +F+ M  RN+V+WNS+I  Y   G P EA+ +F++M  +G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           VEP   T++  L ACA+LG L  G   H  + ++ L  ++   N+L+ +Y+KC  + +A 
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F +++ K++VSW ++I+G A NG   EAL  F ++  K + P   T V V+ A +   
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH-- 354

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTW 510
                                            CG V      F  M E +     +  +
Sbjct: 355 ---------------------------------CGMVDEGFDYFKRMKEEYGIVPKIEHY 381

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             M+D  G  GL K A E    M   P +PN + +   + AC+  G
Sbjct: 382 GCMVDLLGRAGLVKQAHEFIQNM---PMQPNAVVWRTLLGACTIHG 424


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/652 (39%), Positives = 377/652 (57%), Gaps = 14/652 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++F+   ++N YAK   I  A ++FD +P+ D+VS+NT++A +A  G     L L   + 
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 232 EEGRRGDFITIVSILPAVAN-VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           E     D  T+  ++ A  + VG +R    +H + +  G D   +V+ A++  Y++ G +
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLVR---QLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190

Query: 291 ETARLVFDGMKS---RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
             AR VF  M     R+ VSWN+MI A  +     EA+ +F++M+ +G++    T+   L
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK-KVDRAADIFSKLQGKTL 406
            A   + DL  G   H ++ +     +  + + LI +YSKC   +     +F ++    L
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310

Query: 407 VSWNAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           V WN MI G++    ++E  L  F +M+    +PD  + V V  A + LS     K +HA
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370

Query: 466 LVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           L I+S    N V V  AL+ MY+KCG V  AR +FD M E +  + N MI GY  HG+  
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            ++ LF  MLE    PN ITF+  +SAC H+G VEEG  YF  +K+ + IEP  +HY  M
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           +DLLGRAG+L EA   I+ MP  PG   +  +LGAC+ H NVEL  KAAN    L+P   
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +V+L+N+YA+A+ W++ A V+ +M ++G++K PGCS +E+  +VH F +  T HP  K
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 705 RIYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
            I+ ++  ++ ++K AGYVPD         +VE   +E  L  HSEKLA+AFGL+++  G
Sbjct: 611 EIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEG 670

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             I + KNLR+CGDCHNA K IS +TGREI VRD HRFHCFK G CSC DYW
Sbjct: 671 VPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 241/519 (46%), Gaps = 17/519 (3%)

Query: 26  HTLSQRAYIPSRIY-RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
           H L  ++ IP   Y  +   LL   C SL   +    L     +         L++ + K
Sbjct: 32  HALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNV----FSYNTLINAYAK 87

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           ++ +  A RVF+ IP      Y+T++  YA        +     +R   +    +  + +
Sbjct: 88  HSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGV 147

Query: 145 LKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE-- 201
           +  CG DVG +R   ++H  ++V G          V+  Y++ G + EA ++F  M E  
Sbjct: 148 ITACGDDVGLVR---QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGG 204

Query: 202 -RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD VSWN ++    Q+     A+ L   M   G + D  T+ S+L A   V  L  G+ 
Sbjct: 205 GRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQ 264

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAY-VEG 318
            HG  +++GF    +V + L+D+Y+KC G +   R VF+ + + ++V WN+MI+ + +  
Sbjct: 265 FHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYE 324

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSM 377
              E+ +  F++M   G  P + + +    AC++L     G  VH L  +  +  + VS+
Sbjct: 325 DLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSV 384

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+L++MYSKC  V  A  +F  +     VS N+MI GYAQ+G   E+L  F  M  K+I
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDI 444

Query: 438 KPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            P+S T ++V+ A      +    K+ + +  R C E      + +ID+  + G +  A 
Sbjct: 445 APNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAE 504

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
            + + M        W  ++     HG  + AV+  N+ L
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 200/403 (49%), Gaps = 20/403 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPD---KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +++ + +   LS+A RVF  + +   + +  ++ M+    +     +AV     M    +
Sbjct: 180 VLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGL 239

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAY 193
              ++    +L     V ++  G++ HG +I +GF  +    +G++++Y+KC G + E  
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECR 299

Query: 194 KMFDRMPERDLVSWNTIVAGFA-QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           K+F+ +   DLV WNT+++GF+     +E  L     M   G R D  + V +  A +N+
Sbjct: 300 KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNL 359

Query: 253 GSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
            S  +GK VH  A+++    + V+V+ ALV MY+KCG V  AR VFD M   N VS NSM
Sbjct: 360 SSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSM 419

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLK 370
           IA Y + G   E++R+F+ ML++ + P ++T +  L AC   G +E G  + + + ++  
Sbjct: 420 IAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFC 479

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVN---EAL 426
           +  +    + +I +  +  K+  A  I   +      + W  ++    ++G V    +A 
Sbjct: 480 IEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAA 539

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N F ++   N  P  + M+S + A A       A+W  A  ++
Sbjct: 540 NEFLRLEPYNAAP--YVMLSNMYASA-------ARWEEAATVK 573



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 51/439 (11%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR----------- 289
           T  ++L A      L  GK +H    ++       +S     +Y+KCG            
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 290 --------------------VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
                               +  AR VFD +   ++VS+N++IAAY + G     +R+F+
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD--VSMTNSLISMYSK 387
           ++ +  +     T+   + AC D   L R +    ++     G D   S+ N++++ YS+
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVV----CGHDCYASVNNAVLACYSR 186

Query: 388 CKKVDRAADIFSKL---QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
              +  A  +F ++    G+  VSWNAMI+   Q+    EA+  F +M  + +K D FTM
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC-GAVGTARALFDMMN 503
            SV+ A   +  +   +  H ++I+S F  N  V + LID+Y+KC G++   R +F+ + 
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306

Query: 504 ERHVTTWNVMIDGYGTH-GLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEE 560
              +  WN MI G+  +  L +  +  F +M     +P+D +F+C  SACS+  S  + +
Sbjct: 307 APDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGK 366

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            +H   ++K D     V  +  A+V +  + G +++A      MP    +++   + G  
Sbjct: 367 QVHAL-AIKSDVPYNRVSVN-NALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYA 424

Query: 621 KIHKNVELGEKAANRLFEL 639
           +    VE     + RLFEL
Sbjct: 425 QHGVEVE-----SLRLFEL 438


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/650 (38%), Positives = 384/650 (59%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+     + DA RVF+ +P +   L++ ML GY K    ++A+     MR     
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                YT +L +C   G+   G ++HG +I +GF  D      +V MY+KCG + +A K+
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ MP+ D V+WN ++AG+ QNGF + A  L   M   G + D +T  S LP++   GSL
Sbjct: 304 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 363

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R  K VH Y +R      V + +AL+D+Y K G VE AR +F      +V    +MI+ Y
Sbjct: 364 RHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGY 423

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V  G   +A+  F+ ++ +G+ P ++T+   L ACA L  L+ G  +H  + + +L   V
Sbjct: 424 VLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIV 483

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           ++ +++  MY+KC ++D A + F ++     + WN+MI  ++QNG+   A++ F +M   
Sbjct: 484 NVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMS 543

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             K DS ++ S + + A L  + Y K +H  VIR+ F  + FV +ALIDMY+KCG +  A
Sbjct: 544 GAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALA 603

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +F++M  ++  +WN +I  YG HG  +  ++LF++ML     P+ +TFL  ISAC H+
Sbjct: 604 RCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHA 663

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GLV EGIHYF  + ++YGI   M+HY  MVDL GRAGRL+EA+D I+ MP  P   V+G 
Sbjct: 664 GLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGT 723

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC++H NVEL + A+  L ELDP   GY+VLL+N++A A  W  + KVR +M++KG+
Sbjct: 724 LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           QK PG S +++    H F +    HP+S  IY  L +L+ E++  GYVP 
Sbjct: 784 QKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQ 833



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 254/492 (51%), Gaps = 5/492 (1%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L   C+    +++ R++   II  G+ D     ++++ L+     +SD   +F  + +  
Sbjct: 50  LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGL-ELC 108

Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
           +AL ++ M++G       D A+ F  +M   +V+P  Y + Y++K CG +  +     +H
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
                 GF +DLF  + ++ +YA  G I +A ++FD +P+RD + WN ++ G+ ++G   
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+     M       + +T   IL   A  G   +G  VHG  + +GF+    V+  LV
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY+KCG +  AR +F+ M   + V+WN +IA YV+ G  +EA  +F  M+  GV+P +V
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L +  + G L     VH  + + ++  DV + ++LI +Y K   V+ A  IF + 
Sbjct: 349 TFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQN 408

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +    AMI GY  +G   +A+N F  +  + + P+S TM SV+PA A L+ ++  K
Sbjct: 409 TLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGK 468

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H  +++   E  V V +A+ DMYAKCG +  A   F  M+E     WN MI  +  +G
Sbjct: 469 ELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNG 528

Query: 522 LGKAAVELFNKM 533
             + AV+LF +M
Sbjct: 529 KPEMAVDLFRQM 540



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 230/462 (49%), Gaps = 3/462 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPER 202
           L + C D   +++ +++H Q+IV G S D+ A++  V+ +Y  CG+I +   +F  +   
Sbjct: 50  LFRACSDASVVQQARQVHTQIIVGGMS-DVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           + + WN ++ G    G+ + AL    +M       D  T   ++ A   + ++ +   VH
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
             A   GF   + V +AL+ +YA  G +  AR VFD +  R+ + WN M+  YV+ G+  
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
            AM  F  M        +VT    L  CA  G    G  VH L+       D  + N+L+
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           +MYSKC  +  A  +F+ +     V+WN +I GY QNG  +EA   F  M S  +KPDS 
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T  S +P++ E   +R+ K +H+ ++R     +V++ +ALID+Y K G V  AR +F   
Sbjct: 349 TFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQN 408

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
               V     MI GY  HGL   A+  F  +++    PN +T    + AC+    ++ G 
Sbjct: 409 TLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGK 468

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
                + K   +E +++   A+ D+  + GRL+ A++F ++M
Sbjct: 469 ELHCDILKKQ-LENIVNVGSAITDMYAKCGRLDLAYEFFRRM 509



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 239/484 (49%), Gaps = 11/484 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L +C +  +     ++  L+I SG          LV+++ K  +L DA ++F  +P   
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ GY +    D+A      M    V P    +   L    + G +R  KE+H 
Sbjct: 312 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 371

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ +    D++  + ++++Y K G +E A K+F +    D+     +++G+  +G    
Sbjct: 372 YIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNID 431

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A++    + +EG   + +T+ S+LPA A + +L++GK +H   ++   ++IVNV +A+ D
Sbjct: 432 AINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITD 491

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCGR++ A   F  M   + + WNSMI+++ + G PE A+ +F++M   G +  +V+
Sbjct: 492 MYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVS 551

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  AL + A+L  L  G  +H  + +    +D  + ++LI MYSKC K+  A  +F+ + 
Sbjct: 552 LSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMA 611

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-K 461
           GK  VSWN++I  Y  +G   E L+ F +M    + PD  T + +I A     ++     
Sbjct: 612 GKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIH 671

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT----TWNVMIDGY 517
           + H +         +     ++D+Y + G +  A   FD +     T     W  ++   
Sbjct: 672 YFHCMTREYGIGARMEHYACMVDLYGRAGRLHEA---FDAIKSMPFTPDAGVWGTLLGAC 728

Query: 518 GTHG 521
             HG
Sbjct: 729 RLHG 732



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 2/321 (0%)

Query: 238 DFIT--IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           D++T  + S+  A ++   ++  + VH   +  G   +  +S+ ++ +Y  CGR+     
Sbjct: 41  DYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGN 100

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           +F G++  N + WN MI      G  + A+  + KML   V P   T    + AC  L +
Sbjct: 101 LFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNN 160

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +   + VH     L    D+ + ++LI +Y+    +  A  +F +L  +  + WN M+ G
Sbjct: 161 VPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHG 220

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y ++G  N A+  FC MR+     +S T   ++   A          +H LVI S FE +
Sbjct: 221 YVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFD 280

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             V   L+ MY+KCG +  AR LF+ M +    TWN +I GY  +G    A  LFN M+ 
Sbjct: 281 PQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 340

Query: 536 GPTKPNDITFLCAISACSHSG 556
              KP+ +TF   + +   SG
Sbjct: 341 AGVKPDSVTFASFLPSILESG 361


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/663 (37%), Positives = 381/663 (57%), Gaps = 39/663 (5%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA-------Y 193
           +  +LK C  + ++R G+ +HG +I  G   DL+    ++NMY+K   +EE         
Sbjct: 13  FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQRFCDS 72

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           KM   +PE   +       G   N   +L  +L  R+    + GD   + +IL  V    
Sbjct: 73  KMLGGIPEPREI-------GKCSNSH-DLPCELDERVAGIDQNGDLNQMSNILYQVNTYK 124

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR----VETARLVFDGMKSRNVVSWN 309
            +              FD          D+Y+K  +    + + R VF+ M  R++VSWN
Sbjct: 125 KV--------------FDE-----GKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWN 165

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           ++I+   + G  E+A+ + ++M +  + P + T+   L   A+  +L +G  +H    + 
Sbjct: 166 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN 225

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
               DV + +SLI MY+KC +VD +  +F  L     +SWN++I G  QNG  +E L +F
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M    IKP+  +  S++PA A L+ +   K +H  +IRS F+ NVF+ +AL+DMYAKC
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 345

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G + TAR +FD M    + +W  MI GY  HG    A+ LF +M     KPN + F+  +
Sbjct: 346 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +ACSH+GLV+E   YF S+ +DY I P ++HY A+ DLLGR GRL EA++FI  M IEP 
Sbjct: 406 TACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 465

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            +V+  +L AC++HKN+EL EK + +LF +DP   G +VLL+NIY+AA  W    K+R  
Sbjct: 466 GSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIA 525

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M  KG++K P CS +E+KN+VH+F +G   HP   RI   L+ L+++++  GYV DT  +
Sbjct: 526 MRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEV 585

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
            HDVE+  +  LL SHSE+LAI FG++++  G+TI + KNLRVC DCH ATK+IS + GR
Sbjct: 586 LHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGR 645

Query: 789 EII 791
           EI+
Sbjct: 646 EIV 648



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 163/267 (61%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           L    +VFE +P +    ++T++ G A+    +DA+  +  M   D+ P  +  + +L +
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
             +   + +GKEIHG  I NG+  D+F  + +++MYAKC +++++ ++F  +P+ D +SW
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N+I+AG  QNG  +  L    +M     + + ++  SI+PA A++ +L +GK +HGY +R
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           + FD  V +++ALVDMYAKCG + TAR +FD M+  ++VSW +MI  Y   G+  +A+ +
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLG 354
           F++M  +GV+P  V  M  L AC+  G
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTACSHAG 412



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 140/284 (49%), Gaps = 12/284 (4%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           I++G        + L+ ++ K   + D+ RVF  +P      +++++ G  +    D+ +
Sbjct: 223 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 282

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
            F  +M    + P   +++ ++  C  +  +  GK++HG +I + F  ++F  + +V+MY
Sbjct: 283 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 342

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
           AKCG I  A  +FD+M   D+VSW  ++ G+A +G A  A+ L  RM  EG + +++  +
Sbjct: 343 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 402

Query: 244 SILPAVANVGSLR-----IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
           ++L A ++ G +             Y +  G +       A+ D+  + GR+E A     
Sbjct: 403 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHY----AAVADLLGRVGRLEEAYEFIS 458

Query: 299 GMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            M      S W++++AA     N E A ++ +K+    V+P N+
Sbjct: 459 DMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNI 500


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/732 (36%), Positives = 391/732 (53%), Gaps = 83/732 (11%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K   L  A  +F+ IP     LY  M+ GY +   L DA+    RM   DV     ++  
Sbjct: 24  KNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVV----SWNS 79

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           ++K C D                                   CG +  A ++FD MPE++
Sbjct: 80  MIKGCLD-----------------------------------CGNLGMATRLFDEMPEKN 104

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           ++SW T+V G+ + G  ELA  L   MH                 V +V +      VHG
Sbjct: 105 VISWTTMVNGYLKFGRVELAQRLFLDMH-----------------VKDVAAW--NAMVHG 145

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           Y     F++               GRVE    +F+ M  R+V+SW SMI      G  EE
Sbjct: 146 Y-----FEN---------------GRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEE 185

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F+KML  GVEPT  T    L ACA+  +   G+ VH  + +L       ++ SLI+
Sbjct: 186 ALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLIT 245

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
            Y+ C K++ A  IF++   K +V W A++  Y  N +  +AL  F  M      P+  T
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQST 305

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
               + A   L  +   K IH + I+   E +VFV  +L+ MY +CG V +A A+F  +N
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
           E+ + +WN +I G   HG G  A+  FN+M+     PN+ITF   +SACS SG++ +G  
Sbjct: 366 EKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRC 425

Query: 564 YF--TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
           +F   S  K   + P   HY  MVD+LGR G+L+EA + ++ MP++    ++ A+L AC+
Sbjct: 426 FFEYISRYKSNVLRP--QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACR 483

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +H N+E+ E+AA  + +L+P+    +VLL+NIYA+A  W  ++++R  M++ GL K PG 
Sbjct: 484 VHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGS 543

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENL 740
           S V L+ + H F S    HP S+RIY  L+ L  ++K  GYVPD   ++HDVED  +E +
Sbjct: 544 SWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEM 603

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           LS HSE+LAIAFGL+++  GSTI + KNLRVCGDCH+  K +S + GR+I+VRD  RFH 
Sbjct: 604 LSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHH 663

Query: 801 FKNGVCSCGDYW 812
           FKNG+CSC DYW
Sbjct: 664 FKNGICSCSDYW 675



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 4/279 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G          L++ +     +  A ++F     K    +  +L  Y       DA
Sbjct: 228 VVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDA 287

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +     M      P    ++  LK C  +  + +GKEIH   I  G   D+F    +V M
Sbjct: 288 LRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVM 347

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y +CG +  A  +F  + E+D+VSWN+I+ G AQ+GF   AL    +M   G   + IT 
Sbjct: 348 YTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITF 407

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA-LVDMYAKCGRVETARLVFDGMK 301
             +L A +  G L  G+    Y  R   + +     A +VD+  +CG+++ A  +   M 
Sbjct: 408 TGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMP 467

Query: 302 SR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            + N + W ++++A     N E A R  + +LD  +EP 
Sbjct: 468 VKANSMIWLALLSACRVHSNLEVAERAAKHILD--LEPN 504



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 43/353 (12%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           +T+L + + K  R++ ARL+FD + S N+  +  MIA Y       +A+++F +M  + V
Sbjct: 16  TTSLAN-HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDV 74

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
              N  I      C D G+L       +L D++     +S T ++++ Y K  +V+ A  
Sbjct: 75  VSWNSMI----KGCLDCGNLGMAT---RLFDEMPEKNVISWT-TMVNGYLKFGRVELAQR 126

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRV-------------------------------NEA 425
           +F  +  K + +WNAM+ GY +NGRV                                EA
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCFEKNVFVMTALID 484
           L  F KM    ++P   T   V+ A A          +H  V++  CF    F+  +LI 
Sbjct: 187 LFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHE-FISVSLIT 245

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
            YA C  +  A  +F+    ++V  W  ++  Y  +   + A+ +F  M +    PN  T
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQST 305

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           F   + AC     +++G    T   K  G+E  +    ++V +    G +N A
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIK-LGLETDVFVGNSLVVMYTECGNVNSA 357



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           +S T SL + + K +++D+A  IF K+    L  +  MI GY +N R+ +AL  F +M  
Sbjct: 13  LSYTTSLAN-HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSV 71

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           +    D  +  S+I    +   +  A      +     EKNV   T +++ Y K G V  
Sbjct: 72  R----DVVSWNSMIKGCLDCGNLGMA----TRLFDEMPEKNVISWTTMVNGYLKFGRVEL 123

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A+ LF  M+ + V  WN M+ GY  +G  +  V LF +M   P + + I++   I     
Sbjct: 124 AQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEM---PVR-DVISWTSMIGGLDL 179

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
           +G  EE +  F  + +  G+EP    +  ++     A   N
Sbjct: 180 NGKSEEALFVFKKMLRS-GVEPTWSTFACVLSACANAVEFN 219


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/610 (40%), Positives = 357/610 (58%), Gaps = 7/610 (1%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNT +   A+      AL L  +M   G R +  T    L + A +    +G   HG   
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNV-VSWNSMIAAYVEGGNPEEA 324
           + G      V T L+ MY K   V+ AR VF+    SR + V +N++++ YV      EA
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F++M ++GV   +VT++  + AC    +LE G  +H    +    +DVS+ N  I+M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  V+ A  +F ++  K L+SWNAM+ GYAQNG     L  +  M    + PD  T+
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           V V+ + A L        +   +  S F  N F+  ALI+MYA+CG +  A+A+FD M E
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R + +W  +I GYG HG G+ AV+LF +M+    +P+   F+C +SACSH+GL ++G+ Y
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +K++Y +EP  +HY  MVDLLGRAGRL EA   I+ MPI+P   V+GA+LGACKIHK
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           NVEL E A  R+ EL+P+  GY+VLL+NIY+ A+    + ++R +M++K L+K PGCS V
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENL--LS 742
           ELK  VH F  G   H QS  IY  LE L   I      P+ +   + E+  ++    + 
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD---NREESNKDGFTRVG 553

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLA+AFGLLN++ G+ + I KNLR+C DCH   K +S +  R++ VRD  RFH F+
Sbjct: 554 VHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFR 613

Query: 803 NGVCSCGDYW 812
           NG CSC DYW
Sbjct: 614 NGSCSCKDYW 623



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 224/455 (49%), Gaps = 6/455 (1%)

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           + L   ++T L+  AK      A+S   +M      P  + + + LK C  +     G +
Sbjct: 11  NALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 70

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-MPERDL-VSWNTIVAGFAQN 217
            HGQ+   G   + F  TG+++MY K   ++ A K+F+     R L V +N +V+G+  N
Sbjct: 71  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 130

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                A+ L  +M+EEG   + +T++ ++PA  +  +L +G ++H   ++ GFDS V+V 
Sbjct: 131 SKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 190

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
              + MY KCG V  A+ +FD M  + ++SWN+M++ Y + G     + +++ M   GV 
Sbjct: 191 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 250

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VT++  L +CA+LG    G  V   +      ++  + N+LI+MY++C  + +A  +
Sbjct: 251 PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  +TLVSW A+I GY  +G    A+  F +M    I+PD    V V+ A +   + 
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 370

Query: 458 RYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
                   ++ R+   E      + ++D+  + G +  A+ L + M  +     W  ++ 
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
               H   + A   F +++E   +P +I +   +S
Sbjct: 431 ACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 463



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 168/317 (52%), Gaps = 5/317 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYAKFASLD 120
           I K G   +   QT L+S++CK + + +A +VFE      KL   Y+ ++ GY   +   
Sbjct: 75  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +AV    +M  + V         L+  C     +  G  +H   +  GF  D+  +   +
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY KCG +  A K+FD MP + L+SWN +V+G+AQNG A   L+L   M   G   D +
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+V +L + AN+G+  +G  V      +GF S   ++ AL++MYA+CG +  A+ VFDGM
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R +VSW ++I  Y   G+ E A+++F++M+  G+EP     +  L AC+  G  ++G+
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374

Query: 361 FVHKLLD---QLKLGTD 374
              K++    QL+ G +
Sbjct: 375 EYFKMMKRNYQLEPGPE 391


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/679 (35%), Positives = 396/679 (58%), Gaps = 6/679 (0%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C    SLK+ + I   ++  GL +       L++L+   +    A  VF+ + +  
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 103 D-ALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           + +L++ ++ GY K     +A+    ++  Y  + P  Y Y  +LK CG + +   GK I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  L+  G  +D+   + +V MYAKC   E+A  +F+ MPE+D+  WNT+++ + Q+G  
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + AL+    M   G   + +TI + + + A +  L  G  +H   + +GF     +S+AL
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMY KCG +E A  VF+ M  + VV+WNSMI+ Y   G+    +++F++M ++GV+PT 
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTL 308

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   +  C+    L  G FVH    + ++ +DV + +SL+ +Y KC KV+ A +IF  
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKL 368

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +    +VSWN MI GY   G++ EAL  F +MR   ++PD+ T  SV+ A ++L+ +   
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKG 428

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           + IH L+I    + N  VM AL+DMYAKCGAV  A ++F  + +R + +W  MI  YG+H
Sbjct: 429 EEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A+ELF +ML+   KP+ +TFL  +SAC H+GLV+EG +YF  +   YGI P ++H
Sbjct: 489 GQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEH 548

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           Y  ++DLLGRAGRL+EA++ +Q+ P I   + +   +  AC++H+N++LG + A  L + 
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DPD+   ++LL+N+YA+A  WD++  VR+ M++ GL+K PGCS +E+  ++  F+     
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668

Query: 700 HPQSKRIYTFLETLIDEIK 718
           H   + ++  L  L D ++
Sbjct: 669 HLHLELVFKCLSYLSDHME 687



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 7/267 (2%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L AC +   L++G  +H+ +  L L  D+ +  +LI++Y  C   D A  +F  ++
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 403 GKTLVS-WNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAELSVIRYA 460
               +S WN ++ GY +N    EAL  F K +    +KPDS+T  SV+ A   L      
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  ++++    ++ V ++L+ MYAKC A   A  LF+ M E+ V  WN +I  Y   
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  K A+E F  M     +PN +T   AIS+C+    +  G+     L    G   ++D 
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS-GF--LLDS 242

Query: 581 Y--GAMVDLLGRAGRLNEAWDFIQKMP 605
           +   A+VD+ G+ G L  A +  ++MP
Sbjct: 243 FISSALVDMYGKCGHLEMAIEVFEQMP 269



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D+  ++ ++ A      ++  K IH  V+    + ++F+   LI++Y  C     A+ +F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61

Query: 500 D-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-TKPNDITFLCAISACS---- 553
           D M N   ++ WN ++ GY  + +   A+ELF K+L  P  KP+  T+   + AC     
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121

Query: 554 -------HSGLVEEGI 562
                  H+ LV+ G+
Sbjct: 122 YVLGKMIHTCLVKTGL 137


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/773 (33%), Positives = 425/773 (54%), Gaps = 9/773 (1%)

Query: 44   ALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            A +L  CT+  +L   L L   I ++GL  + L    L+S++ +  SL++A +VF+ +  
Sbjct: 306  ASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRS 365

Query: 101  KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                 ++ M+ GY +   +++A      M      P  + Y  LL +C D  ++ RGKE+
Sbjct: 366  LNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKEL 424

Query: 161  HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
            H Q+   G+  DL   T +++MYAKCG  EEA K+F++MPER+++SWN  ++   ++   
Sbjct: 425  HSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLG 484

Query: 221  ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
            + A     +M  +    D IT +++L +  +   L  G+ +HG   + G  S  +V+ AL
Sbjct: 485  KEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANAL 544

Query: 281  VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            + MY +CG +  AR VF  ++ R++ SWN+MIAA V+ G    A  +F+K   +G +   
Sbjct: 545  ISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDK 604

Query: 341  VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             T +  L A A+L DL+ G  +H L+++   G D+ +  +LI MYSKC  +  A ++FS 
Sbjct: 605  YTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFST 664

Query: 401  LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
            +Q K +V WNAM+  YA + R  +AL  F +M+ + + PDS T  + + A A L+ + + 
Sbjct: 665  VQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHG 724

Query: 461  KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
            K IHA +  +  E +  V  +LI+MY++CG + +A+ +F+ M  R + +WN +I GY  +
Sbjct: 725  KKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQN 784

Query: 521  GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
            G G  A+E +  ML     PN  TF   +S+ +  G  E+   +  S+KK++ +EP   H
Sbjct: 785  GQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQH 844

Query: 581  YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
            Y  MV  LGRAG L EA +FI+++  E    ++ ++L AC+IH NVEL E A   L +  
Sbjct: 845  YAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAK 904

Query: 641  PDEG-GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
                      L +IYAAA  W+ ++ ++T M++ GL     C+ +E+ +E H+F +    
Sbjct: 905  AQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIANHLS 963

Query: 700  HPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
             PQ   +   +E L+ ++   G+  D     + +   +E L     E LA+A+GL +++ 
Sbjct: 964  -PQIG-VQCKIEELVRKMTDRGFSLDPQYASN-DSREKECLFFQCPELLAVAYGLEHTAS 1020

Query: 760  GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            G +I    + RV    H   K+IS    R I+VRD + FH F++G+CSCGDYW
Sbjct: 1021 GVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICSCGDYW 1073



 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 185/543 (34%), Positives = 295/543 (54%), Gaps = 14/543 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y   L+ C     +  GK++H  +    F  D++    +++MY+KCG IE+A  +F  M 
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME 162

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ++D+VSWN +++G+A +G  + A DL  +M  EG + +  T +SIL A  +  +L  G+ 
Sbjct: 163 DKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQ 222

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    +AG++S VNVSTAL++MY KCG +E AR VF+ M+ RNVVSW +MI+ YV+ G+
Sbjct: 223 IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 282

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA+ +F+K++  G++P  V+    L AC +  DL  G+ +H  + Q  L  +V + N+
Sbjct: 283 SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNA 342

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LISMYS+C  +  A  +F  L+     +WNAMI GY + G + EA   F  M  K  +PD
Sbjct: 343 LISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPD 401

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            FT  S++   A+ + +   K +H+ +  + ++ ++ V TALI MYAKCG+   AR +F+
Sbjct: 402 KFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFN 461

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M ER+V +WN  I     H LGK A + F +M      P+ ITF+  +++C+    +E 
Sbjct: 462 QMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLER 521

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  Y       +G+        A++ + GR G L +A +   ++     +  + AM+ A 
Sbjct: 522 G-RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIR-RRDLGSWNAMIAA- 578

Query: 621 KIHKNVELGEK-AANRLFELDPDEGGY--HVLLANIYAAASMWDKLAKVRTI---MEKKG 674
               NV+ G   +A  LF     EGG        N+  A +  + L   R I   +EK G
Sbjct: 579 ----NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGG 634

Query: 675 LQK 677
             K
Sbjct: 635 FGK 637



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 307/581 (52%), Gaps = 9/581 (1%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C S   L+   +I   I K+G        T L++++CK  SL  A +VF  + ++ 
Sbjct: 207 ILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 266

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ GY +     +A++   ++    + P   ++  +L  C +  ++  G ++H 
Sbjct: 267 VVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHA 326

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +   G   ++     +++MY++CG +  A ++FD +   +  +WN ++AG+ + G  E 
Sbjct: 327 YIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEE 385

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A  L   M ++G + D  T  S+L   A+   L  GK +H      G+ + + V+TAL+ 
Sbjct: 386 AFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALIS 445

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG  E AR VF+ M  RNV+SWN+ I+        +EA + F++M    V P ++T
Sbjct: 446 MYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHIT 505

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
            +  L++C    DLERG ++H  ++Q  + ++  + N+LISMY +C  +  A ++F +++
Sbjct: 506 FITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIR 565

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + L SWNAMI    Q+G    A + F K RS+  K D +T ++V+ A+A L  +   + 
Sbjct: 566 RRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRM 625

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH LV +  F K++ V+T LI MY+KCG++  A  +F  + E+ V  WN M+  Y     
Sbjct: 626 IHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDR 685

Query: 523 GKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           G+ A++LF +M LEG   P+  T+  A++AC+    VE G      L K+ G+E      
Sbjct: 686 GQDALKLFQQMQLEG-VNPDSSTYSTALNACARLTAVEHGKKIHAQL-KEAGMETDTRVS 743

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML-GACK 621
            +++++  R G L  A    +KM +   I  + A++ G C+
Sbjct: 744 NSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIAGYCQ 783



 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 182/594 (30%), Positives = 295/594 (49%), Gaps = 34/594 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S++ K  S+ DA  VF+ + DK    ++ M+ GYA      +A     +M+ + + P 
Sbjct: 141 LISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPN 200

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  +L  C     +  G++IH ++   G+  D+   T ++NMY KCG +E A K+F+
Sbjct: 201 QNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFN 260

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ER++VSW  +++G+ Q+G +  AL L  ++   G + + ++  SIL A  N   L  
Sbjct: 261 EMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGE 320

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  +H Y  +AG +  V V  AL+ MY++CG +  AR VFD ++S N  +WN+MIA Y E
Sbjct: 321 GLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE 380

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  EEA R+F+ M  +G +P   T    L  CAD  DL+RG  +H  +      TD+++
Sbjct: 381 -GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTV 439

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +LISMY+KC   + A  +F+++  + ++SWNA I    ++    EA   F +MR  ++
Sbjct: 440 ATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDV 499

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            PD  T ++++ +      +   ++IH  + +     N  V  ALI MY +CG +  AR 
Sbjct: 500 NPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADARE 559

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--- 554
           +F  +  R + +WN MI     HG   +A +LF K      K +  TF+  + A ++   
Sbjct: 560 VFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLED 619

Query: 555 -------SGLVEEG-----IHYFTSLKKDYG-------IEPVMDH--------YGAMVDL 587
                   GLVE+G     I   T+L K Y         E V           + AM+  
Sbjct: 620 LDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAA 679

Query: 588 LGRAGRLNEAWDFIQKMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFE 638
              + R  +A    Q+M +E   P  + +   L AC     VE G+K   +L E
Sbjct: 680 YAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKE 733



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 176/344 (51%), Gaps = 22/344 (6%)

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           EG + + A+++  K   +GV+         L  C     L  G  VH  +   +   D+ 
Sbjct: 80  EGKSIKGAVQLLGK---RGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIY 136

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N LISMYSKC  ++ A ++F  ++ K +VSWNAMI GYA +GR  EA + F +M+ + 
Sbjct: 137 LNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREG 196

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +KP+  T +S++ A      + + + IH+ + ++ +E +V V TALI+MY KCG++  AR
Sbjct: 197 LKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELAR 256

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +F+ M ER+V +W  MI GY  HG  + A+ LF K++    +PN ++F   + AC++  
Sbjct: 257 KVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN 316

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            + EG+     +K+  G+E  +    A++ +  R G L  A      +      T + AM
Sbjct: 317 DLGEGLKLHAYIKQ-AGLEQEVLVGNALISMYSRCGSLANARQVFDNLR-SLNRTTWNAM 374

Query: 617 LGACKIHKNVELGE---KAANRLFE------LDPDEGGYHVLLA 651
           +           GE   + A RLF         PD+  Y  LLA
Sbjct: 375 IAG--------YGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLA 410


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/548 (42%), Positives = 337/548 (61%), Gaps = 2/548 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH + +++ F   + +   L++MYAKCG +E AR VF+ M  R+ V+W ++I+ Y +
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
              P +A+  F +ML  G  P   T+   + A A       G  +H    +    ++V +
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            ++L+ +Y++   +D A  +F  L+ +  VSWNA+I G+A+     +AL  F  M     
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P  F+  S+  A +    +   KW+HA +I+S  +   F    L+DMYAK G++  AR 
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD + +R V +WN ++  Y  HG GK AV  F +M     +PN+I+FL  ++ACSHSGL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           ++EG HY+  +KKD GI P   HY  +VDLLGRAG LN A  FI++MPIEP   ++ A+L
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC++HKN ELG  AA  +FELDPD+ G HV+L NIYA+   W+  A+VR  M++ G++K
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYV 736
            P CS VE++N +H F +   +HPQ + I    E ++ +IK  GYVPDT+  I  V+   
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E  L  HSEK+A+AF LLN+ PGSTIHI+KN+RVCGDCH A K  S V GREIIVRD +
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617

Query: 797 RFHCFKNG 804
           RFH FK+ 
Sbjct: 618 RFHHFKDA 625



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 213/392 (54%), Gaps = 4/392 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LLK C     + +G+ +H  ++ + F  D+     ++NMYAKCG +EEA K+F++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +RD V+W T+++G++Q+     AL    +M   G   +  T+ S++ A A       G  
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG+ ++ GFDS V+V +AL+D+Y + G ++ A+LVFD ++SRN VSWN++IA +     
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+A+ +FQ ML  G  P++ +      AC+  G LE+G +VH  + +          N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ MY+K   +  A  IF +L  + +VSWN+++  YAQ+G   EA+ +F +MR   I+P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALF 499
             + +SV+ A +   ++      + L+ +       +    ++D+  + G +  A R + 
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422

Query: 500 DMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
           +M  E     W  +++    H    LG  A E
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 199/395 (50%), Gaps = 24/395 (6%)

Query: 32  AYIPS--RIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQT----------KLV 79
           +YIP+  R Y      LL+ CT  K       L+I+  +   H+ Q+           L+
Sbjct: 54  SYIPADRRFYN----TLLKKCTVFK-------LLIQGRIVHAHILQSIFRHDIVMGNTLL 102

Query: 80  SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
           +++ K  SL +A +VFE +P +    + T++ GY++     DA+ F  +M     +P  +
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
             + ++K          G ++HG  +  GF  ++   + ++++Y + G +++A  +FD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             R+ VSWN ++AG A+    E AL+L   M  +G R    +  S+  A ++ G L  GK
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH Y +++G   +      L+DMYAK G +  AR +FD +  R+VVSWNS++ AY + G
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             +EA+  F++M   G+ P  ++ +  L AC+  G L+ G   ++L+ +  +  +     
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402

Query: 380 SLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
           +++ +  +   ++RA     ++    T   W A++
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 39/312 (12%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ L+ +Y  + DA  VF+ +  + D  ++ ++ G+A+ +  + A+     M  D   
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  ++Y  L   C   G + +GK +H  +I +G  L  FA   +++MYAK G I +A K+
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDR+ +RD+VSWN+++  +AQ+GF + A+     M   G R + I+ +S+L A ++ G L
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
             G   +    + G          +VD+  + G +  A    + M      + W +++ A
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439

Query: 315 ----------------------------------YVEGGNPEEAMRIFQKMLDQGV--EP 338
                                             Y  GG   +A R+ +KM + GV  EP
Sbjct: 440 CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499

Query: 339 --TNVTIMEALH 348
             + V I  A+H
Sbjct: 500 ACSWVEIENAIH 511


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/781 (33%), Positives = 426/781 (54%), Gaps = 40/781 (5%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D HL    L+  + K   + +A +VF  +       Y  M+ G+AK      A+    RM
Sbjct: 104 DIHL-ANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 162

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   +    +++  +L VC  + ++  G ++H  +I  GF    F    ++ +Y KCG +
Sbjct: 163 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 222

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPA 248
           +   ++FD MP RD+ SWNT+++   +    E A +L   M   +G R D  T+ +IL A
Sbjct: 223 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 282

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
              + S+ +G+ +H + ++ GF+S ++V  AL+  Y KCG ++    +F+ M+ R+V++W
Sbjct: 283 ARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITW 341

Query: 309 NSMIAAYVEGGNPEEAMRIFQKM-------------------------------LDQGVE 337
             MI AY+E G  + A+ +F KM                               +++GVE
Sbjct: 342 TEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVE 401

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
            T+ T+   L+AC  L + +    +H  + +   G++  +  +L+ M ++C ++  A  +
Sbjct: 402 LTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKM 461

Query: 398 FSKLQGKTL--VSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKPDSFTMVSVIPALAEL 454
           FS+        + W +MI GYA+N +  EA++ FC+ + +  +  D     +V+     L
Sbjct: 462 FSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTL 521

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           +     K IH   ++S F  ++ V  ++I MY+KC  +  A  +F++M    + +WN +I
Sbjct: 522 AFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 581

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTSLKKDY 572
            G+  H  G  A+ +++KM +   KP+ +TF+  ISA  H  S LV+     F S+K  Y
Sbjct: 582 AGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIY 641

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            I+P ++HY ++V +LG  G L EA + I KMPIEP  +V+ A+L AC+IH N  +G++A
Sbjct: 642 HIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRA 701

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A  L  + P +   ++L++N+Y+A   W     VR  M  KG +K PG S +  +N+VHS
Sbjct: 702 AKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHS 761

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           FY+    HPQ+K I++ LE LI E   AGYVPDT+ + H+VE++ +++ L  HS K+A  
Sbjct: 762 FYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAAT 821

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +GLL + PG  I I KN+ +CGDCH   KY+S+VTGREI +RD    HCF NG CSC DY
Sbjct: 822 YGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDY 881

Query: 812 W 812
           W
Sbjct: 882 W 882



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           KAVH    +   D  ++++ AL+  Y K G V  A  VF G+   NVVS+ +MI+ + + 
Sbjct: 92  KAVHASIFKLAED--IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
               +AM IF +M   G+E    + +  L  C  L DLE G  +H ++ ++       ++
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 209

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNI 437
           N+L+ +Y KC  +D    +F ++  + + SWN +I    +      A   F  MR     
Sbjct: 210 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 269

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + D FT+ +++ A   L+ +   + IHA VI+  FE N+ V+ ALI  Y KCG++    A
Sbjct: 270 RIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 328

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           LF+ M  R V TW  MI  Y   GL   A+E+F+KM   P + N I++   +S    +G 
Sbjct: 329 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKM---PAR-NSISYNAILSGFCQNGE 384

Query: 558 VEEGIHYFTSLKK------DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
             + + +F  + +      D+ +  V++  G    LL  A    +   FI K        
Sbjct: 385 GSKALAFFCRMVEEGVELTDFTLTGVLNACG----LLMEAKISKQIHGFILKFGFGSNAC 440

Query: 612 VFGAMLGAC 620
           +  A+L  C
Sbjct: 441 IEAALLDMC 449



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           +LD  V   +V +++A+HA          IF        KL  D+ + N+LI  Y K   
Sbjct: 78  LLDLSVRYDDVELIKAVHA---------SIF--------KLAEDIHLANALIVAYLKLGM 120

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           V  A  +F  L    +VS+ AMI G+A++ R  +A+  F +MRS  I+ + F+ V+++  
Sbjct: 121 VPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTV 180

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
              L  +     +HA+VI+  F    FV  AL+ +Y KCG + +   LFD M  R + +W
Sbjct: 181 CIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASW 240

Query: 511 NVMIDGYGTHGLGKAAVELFNKM 533
           N +I       + + A ELF  M
Sbjct: 241 NTVISSVVKEMMYERAFELFRDM 263



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 174/379 (45%), Gaps = 30/379 (7%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  L E +   +I   I+K G       +  L+ +  +   ++DA ++F       
Sbjct: 410 VLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQ 469

Query: 103 DA--LYHTMLKGYAKFASLDDAVSFLIR------MRYDDVAPVVYNYTYLLKVCGDVGEI 154
               ++ +M+ GYA+ A  ++A+S   +      M  D VA      T +L VCG +   
Sbjct: 470 SGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAS-----TAVLGVCGTLAFH 524

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             GK+IH   + +GF  DL     ++ MY+KC  +++A K+F+ MP  D+VSWN ++AG 
Sbjct: 525 EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGH 584

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY-AMRAGF--D 271
             +   + AL + ++M + G + D +T V I+ A  +  S  +      + +M+  +  D
Sbjct: 585 LLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHID 644

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQK 330
             V   T+LV +    G +E A  + + M      S W +++ A     N     R  + 
Sbjct: 645 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKH 704

Query: 331 MLD-QGVEPTNVTIMEALHA------CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +L  + ++P+   ++  L++      C+D+   E  +   K   +    + +   N + S
Sbjct: 705 LLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRV---KGFRKHPGRSWIIHENKVHS 761

Query: 384 MYSKCKKVDRAADIFSKLQ 402
            Y++ K   +A DI S L+
Sbjct: 762 FYARDKSHPQAKDIHSGLE 780


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/661 (36%), Positives = 385/661 (58%), Gaps = 48/661 (7%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +IH Q+ ++    +   +T +++       ++ A  +F      +L  +N ++ G A+N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG--FDSIVNV 276
             E ++     M     R D +T+  +L +VA +  + +G+ +HG  M+ G  FDS V V
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRN----VVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           S  LVDMY K G +     +FD    RN    ++ WN +I                    
Sbjct: 178 S--LVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLI-------------------- 215

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
                          + C  +GDL +   + + + +   G+     NSLI+ + +   +D
Sbjct: 216 ---------------NGCCKVGDLSKAASLFEAMPERNAGS----WNSLINGFVRNGDLD 256

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           RA ++F ++  K +VSW  MI G++QNG   +AL+ F +M  + ++P+  T+VS + A  
Sbjct: 257 RARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACT 316

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
           ++  ++  + IH  +  + F+ N  + TAL+DMYAKCG + +A  +F     + + TW+V
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI G+  HG    A++ F KM      P+++ FL  ++ACSHSG V++G+++F S++ DY
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDY 436

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            IEP M HY  +VDLLGRAGRL+EA  FIQ MPI P   ++GA+  AC+ HKN+E+ E  
Sbjct: 437 SIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELT 496

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +L +L+P   G +V L+N+YAA   W+ + +VRT+M+ +G++K PG S +E++ +VHS
Sbjct: 497 AEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHS 556

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           F +G   H +++ I   LE +    K  GY+P+T  + H++E+  +E+ L SHSEKLA+A
Sbjct: 557 FVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALA 616

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           FGL++++PGSTI I KNLRVCGDCH+  KY S ++ REII+RD+ RFH FK+G CSCGDY
Sbjct: 617 FGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDY 676

Query: 812 W 812
           W
Sbjct: 677 W 677



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 197/454 (43%), Gaps = 74/454 (16%)

Query: 31  RAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           RA+ PSR        L+    +L +L +I   I    L       T+L+S  C   SL  
Sbjct: 31  RAHGPSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDY 90

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  +F         +++ +++G A+ +  + +VS  + M    + P      ++LK    
Sbjct: 91  ALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAA 150

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ---------------------- 188
           + ++  G+ +HG ++  G   D F    +V+MY K G+                      
Sbjct: 151 LVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILL 210

Query: 189 -------------IEEAYKMFDRMPERDLVSWN--------------------------- 208
                        + +A  +F+ MPER+  SWN                           
Sbjct: 211 WNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNV 270

Query: 209 ----TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
               T++ GF+QNG  E AL +  RM EEG R + +T+VS L A   +G+L++G+ +H Y
Sbjct: 271 VSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNY 330

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
               GF     + TALVDMYAKCG +++A  VF   K +++++W+ MI  +   G  ++A
Sbjct: 331 LSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQA 390

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT----NS 380
           ++ F KM   G+ P  V  +  L AC+  G++++G+      + ++L   +  T      
Sbjct: 391 LQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGL---NFFESMRLDYSIEPTMKHYTL 447

Query: 381 LISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
           ++ +  +  ++D A      +      V W A+ 
Sbjct: 448 IVDLLGRAGRLDEALSFIQSMPINPDFVIWGALF 481



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 8/287 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ F +   L  A  +F  +P+K    + TM+ G+++    + A+S   RM  + V P 
Sbjct: 245 LINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPN 304

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                  L  C  +G ++ G+ IH  L  NGF L+    T +V+MYAKCG I+ A ++F 
Sbjct: 305 DLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFV 364

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
               +DL++W+ ++ G+A +G  + AL    +M   G   D +  ++IL A ++ G++  
Sbjct: 365 ETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQ 424

Query: 258 G-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAY 315
           G        +    +  +   T +VD+  + GR++ A      M  + + V W ++  A 
Sbjct: 425 GLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCAC 484

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTN----VTIMEALHACADLGDLER 358
               N E A    +K+L   +EP +    V +     A     D+ER
Sbjct: 485 RAHKNIEMAELTAEKLLQ--LEPKHPGSYVFLSNVYAAVGRWEDVER 529



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 77/325 (23%)

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           + ++ A +    L  +   IF+H L    ++ T       LIS     K +D A  IF  
Sbjct: 44  IPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQ------LISSSCSLKSLDYALSIFRC 97

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
                L  +NA+I G A+N R   ++++F  M   +I+PD  T+  V+ ++A L  +   
Sbjct: 98  FDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLG 157

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG--------------------------- 493
           + +H  V++   E + FV  +L+DMY K G +G                           
Sbjct: 158 RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING 217

Query: 494 --------TARALFDMMNERHVTTWN-------------------------------VMI 514
                    A +LF+ M ER+  +WN                                MI
Sbjct: 218 CCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMI 277

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDY 572
           +G+  +G  + A+ +F +MLE   +PND+T + A+ AC+  G ++ G  IH + S     
Sbjct: 278 NGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLS---SN 334

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEA 597
           G +       A+VD+  + G +  A
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSA 359


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/667 (35%), Positives = 391/667 (58%), Gaps = 16/667 (2%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  +I  G   + F M+ +VN+YAKCG +  A K+FD +P R++V W T++ G+ QN  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E+A+++   M E G      T+   L A +++ S+ +GK  H + ++       ++  A
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L  +Y+K G ++++   F     ++V+SW ++I+A  + G     +R+F +ML + VEP 
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           + T+   L  C+ +   + G+ VH L  +L   +++ +TNSL+ +Y KC  +D A ++F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 400 KLQGKTLVSWNAMILGYAQNGRV-----------NEALNYFCKMRSKNIKPDSFTMVSVI 448
           +++ K L++WNAMI G+AQ   +            EAL  + K+     KPD FT+ S++
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              + L+ +   + IHA  I+S F  +V V TAL+DMY KCG++  AR  F  M+ R + 
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +W  MI  +  HG  + A++LF  M     +PN ITF+  ++ACSH+G+V+E + YF  +
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           +K+Y I+PVMDHYG +VD+  R GRL+EA+D I++M +EP   ++  ++  C+ H N EL
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G  AA +L +L P     +V+L N+Y +A  W+ ++ VR +M+++ + K    S + +K 
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY--VPDTNSIHDVEDYVQENLLSS--- 743
           EVHSF + +  H  +  ++T L  L+D  K+ GY  + +   I D E+  +E   SS   
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLA+ FGLLN+  G+ I + K++ +C DCH+  K +S  T R II++D  R H F N
Sbjct: 602 HSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVN 661

Query: 804 GVCSCGD 810
           G CSC D
Sbjct: 662 GQCSCAD 668



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 245/505 (48%), Gaps = 16/505 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +IK+G  ++    + LV+++ K   + +A +VF+ +P +   ++ T++ GY + +  + A
Sbjct: 6   VIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVA 65

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           V     M      P  +  +  L  C  +  I  GK+ H  +I    S D      + ++
Sbjct: 66  VEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSL 125

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+K G ++ + K F    E+D++SW TI++    NG A + L L   M  E    +  T+
Sbjct: 126 YSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTL 185

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S+L   + + S  +G  VH  + + G +S + ++ +LV +Y KCG ++ A+ +F+ M+ 
Sbjct: 186 TSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEY 245

Query: 303 RNVVSWNSMIAAYVEGGN-----------PEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
           +N+++WN+MIA + +  +             EA+ ++ K+   G +P   T+   L  C+
Sbjct: 246 KNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCS 305

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            L  LE+G  +H    +    +DV +  +L+ MY KC  ++RA   F  +  +TL+SW +
Sbjct: 306 RLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTS 365

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  +A++G+   AL  F  MR    +P+  T V V+ A +   ++  A     ++ +  
Sbjct: 366 MITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEY 425

Query: 472 FEKNVFV-MTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAA 526
             K V      L+DM+ + G +  A  +   M+ E +   W ++I G   HG   LG  A
Sbjct: 426 KIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYA 485

Query: 527 VELFNKMLEGPTKPNDITFLCAISA 551
            E   K+    T+   +     ISA
Sbjct: 486 AEQLLKLKPRSTETYVVLLNMYISA 510


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/616 (37%), Positives = 367/616 (59%), Gaps = 11/616 (1%)

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           R+    LV W+  V   A++  + LA+         G    F    + + A     +L  
Sbjct: 9   RVAVSSLVRWDMSVVA-ARHAASSLAV--------PGADARFHDYDAAITACVERQALGE 59

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH + ++A +   V ++T L+ +Y +CG ++ AR V DGM  RNVVSW +MI+ Y +
Sbjct: 60  GRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQ 119

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F +ML  G +    T+   L +C     +++   VH L+ +    + + +
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFV 179

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +SL+ MY K   +  A  +F  L  +  VS  A+I GYAQ G  +EAL+ F ++ S  +
Sbjct: 180 GSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM 239

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + +  T  +++ +L+ L+ + Y K +H L++R      + +  +LIDMY+KCG +  +R 
Sbjct: 240 QCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRR 299

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD M +R   +WN M+ GYG HG+G+  V+LF  M E   KP+ +T L  +S CSH GL
Sbjct: 300 VFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGL 358

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+EG+  F  + K+      + HYG ++DLLGR+G+L +A D I+ MP EP   ++G++L
Sbjct: 359 VDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLL 418

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
           GAC++H NV +GE  A +L +++P   G +V+L+NIYAAA MW  + +VR +M +  + K
Sbjct: 419 GACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTK 478

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYV 736
            P  S + L   +H+F+S    HP+ K I   ++ +  ++KAAG+VPD + + HDV+D  
Sbjct: 479 EPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQ 538

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           +E +L  HSEKLAI FGL+N+ PG TI + KNLR+C DCHN  K++S V GREI +RD +
Sbjct: 539 KERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKN 598

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH  K+G C+CGDYW
Sbjct: 599 RFHLLKDGACTCGDYW 614



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 204/368 (55%), Gaps = 8/368 (2%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           ++Y   +  C +   +  G+++H  ++   +   ++  T ++ +Y +CG +++A  + D 
Sbjct: 42  HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPER++VSW  +++G++Q+G    AL+L  RM   G + +  T+ ++L +     S++  
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + VH   ++  F+S + V ++L+DMY K G ++ AR VFD +  R+ VS  ++I+ Y + 
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  +EA+ +F+++   G++   VT    L + + L  L  G  VH L+ + +L   + + 
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSLI MYSKC K+  +  +F  +  ++ +SWNAM++GY ++G   E +  F  M ++ +K
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVK 340

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA----LIDMYAKCGAVGT 494
           PDS T+++V+   +   ++     I  L+++   E+N  +       +ID+  + G +  
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK---EQNAVIHIGHYGCVIDLLGRSGQLQK 397

Query: 495 ARALFDMM 502
           A  L + M
Sbjct: 398 ALDLIEHM 405



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 177/315 (56%), Gaps = 1/315 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E R++   ++K+         T+L+ L+ +  +L DA  V + +P++    +  M+ 
Sbjct: 56  ALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMIS 115

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY++     +A+   IRM         +    +L  C     I++ +++H  ++   F  
Sbjct: 116 GYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFES 175

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +F  + +++MY K G I+EA K+FD +PERD VS   I++G+AQ G  + ALDL  +++
Sbjct: 176 HMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLY 235

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G + +++T  ++L +++ + SL  GK VHG  +R      + +  +L+DMY+KCG++ 
Sbjct: 236 SSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLL 295

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            +R VFD M  R+ +SWN+M+  Y   G  +E +++F+ M ++ V+P +VT++  L  C+
Sbjct: 296 YSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCS 354

Query: 352 DLGDLERGIFVHKLL 366
             G ++ G+ +  L+
Sbjct: 355 HGGLVDEGLDIFDLI 369


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/684 (34%), Positives = 400/684 (58%), Gaps = 7/684 (1%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++ CT L  +R    I  +I++ G        + L+ L+     + DA R F+ + DK 
Sbjct: 16  VIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKD 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++ M+ GY +    D A+     M   +  P    +  +L +      +  G+++HG
Sbjct: 76  CVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHG 135

Query: 163 QLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
            ++ +G  LD   + G  +V +Y+K  Q+ +A K+FD MP+ DLV WN ++ G+ QNGF 
Sbjct: 136 LVVRSG--LDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFM 193

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + A  L   M   G + D IT  S LP++A   SL+  K +HGY +R G    V +++AL
Sbjct: 194 DDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSAL 253

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +D+Y KC     A  +F+     ++V + +MI+ YV  G  ++A+ IF+ +L + + P  
Sbjct: 254 IDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNA 313

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T    L ACA L  ++ G  +H  + + +L     + +++++MY+KC ++D A  IF +
Sbjct: 314 LTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGR 373

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K  + WN++I  ++Q+G+  EA+  F +M  + +K D  T+ + + A A +  + Y 
Sbjct: 374 ISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYG 433

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +I+  FE ++F M+ALI+MYAKCG +  AR +F++M E++   WN +I  YG H
Sbjct: 434 KEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYH 493

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    ++ LF+ MLE   +P+ ITFL  +S+C H+G VE+G+ YF  + ++YGI   M+H
Sbjct: 494 GYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEH 553

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  M DL GRAG L+EA++ I  MP  P  +V+G +LGAC++H NVEL E A+  L +L+
Sbjct: 554 YACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLE 613

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P   GY++LL ++ A A  W  + K++ +M+++G+QK PGCS +E+ N    F++    H
Sbjct: 614 PKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSH 673

Query: 701 PQSKRIYTFLETLIDEIKAAGYVP 724
           P+S +IY+ L++L+ E++  GYVP
Sbjct: 674 PESPQIYSLLKSLLLELRKVGYVP 697



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 279/546 (51%), Gaps = 8/546 (1%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V P  Y +  ++K C  +  +R GK I   ++  GF LD+F  + ++ +YA  G IE+A 
Sbjct: 6   VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           + FD+M ++D V WN ++ G+ Q G ++ A+ L   M     + D +T   +L    +  
Sbjct: 66  RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            +  G+ +HG  +R+G D +  V   LV +Y+K  ++  AR +FD M   ++V WN MI 
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            YV+ G  ++A  +F +M+  G++P ++T    L + A+   L++   +H  + +  +  
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV + ++LI +Y KC+    A  +F+      +V + AMI GY  NG   +AL  F  + 
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            K + P++ T  S++PA A L+ I+  + +H  +I++  E+   V +A+++MYAKCG + 
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  ++ +    WN +I  +   G  + A+ LF +M     K + +T   A+SAC+
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425

Query: 554 HSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           +   +  G  IH F  +K  +  E  +    A++++  + G+LN A   +  +  E    
Sbjct: 426 NIPALHYGKEIHGFM-IKGAF--ESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEV 481

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            + +++ A   H  +       + + E  + PD   +  +L++   A  + D +   R +
Sbjct: 482 AWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCM 541

Query: 670 MEKKGL 675
            E+ G+
Sbjct: 542 TEEYGI 547



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 10/257 (3%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML  GV P   T    +  C  L ++  G  +  ++ ++    D+ + +SLI +Y+    
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A   F K+  K  V WN MI GY Q G  + A+  F  M S   KPDS T   V+  
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
               +++ Y + +H LV+RS  +    V   L+ +Y+K   +G AR LFDMM +  +  W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI GY  +G    A  LFN+M+    KP+ ITF   + + + S          +SLK+
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAES----------SSLKQ 230

Query: 571 DYGIEPVMDHYGAMVDL 587
              I   +  +G ++D+
Sbjct: 231 IKEIHGYIVRHGVILDV 247


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/658 (37%), Positives = 370/658 (56%), Gaps = 42/658 (6%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAK--CGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           K++H   +  G   D +    +V  YA      +  A K+F+ +P  ++  +N I+ G  
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           QN     A+    +M     R +  T  ++  A     +   G  VH + ++ G    V+
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           + +A + MY   G VE AR +     + +V+ +N+MI  Y++ G  E A  +F  M D+ 
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKN 226

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V   NV                                       ++S  +KC  ++ A 
Sbjct: 227 VGSWNV---------------------------------------MVSGMAKCGMIEEAR 247

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
           ++F++++ K  +SW+AMI GY + G   EAL  F  M+ + I+P  F + SV+ A A L 
Sbjct: 248 ELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLG 307

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +   +WIHA V  +    +  + TAL+DMYAKCG +  A  +F+ M ++ V TWN MI 
Sbjct: 308 ALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMIC 367

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G G HG  + A+ELF KM +   +PN IT L  +SAC+HSG+V+EG+  F S+++ YGIE
Sbjct: 368 GLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIE 427

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P M+HYG +VDLLGRAG L EA + +  MP+EP   V+GA+LGAC+ H +VELGE+    
Sbjct: 428 PGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKI 487

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           L EL+P   G + LL+NIYA A  WD +A VR +M+++G++ + G S+++    VH F  
Sbjct: 488 LLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKM 547

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G   HPQ K IY  L+ +I  +K  G+ P+T+ +  D+E+  +E  L  HSEKLAIAFGL
Sbjct: 548 GDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGL 607

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +N+ PG+TIH+ KNLR+C DCH+A K IS V  REIIVRD  R+H FK G CSC D+W
Sbjct: 608 INTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 68/385 (17%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK--YNSLSDAARVFEPIPDKLDALYHT 108
           TSL  L+++  + +++G    H     LV  +    +++L+ A +VFE +P+    +++ 
Sbjct: 41  TSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNI 100

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           ++KG  +      A+    +M      P  + Y  L K C        G ++H  +I  G
Sbjct: 101 IIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQG 160

Query: 169 FSLDLFAMTGVVNMYAK-------------------------------CGQIEEAYKMFD 197
            S D+   +  + MY                                 CG++E A ++F 
Sbjct: 161 LSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFW 220

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-----------RGDF------- 239
            M ++++ SWN +V+G A+ G  E A +L   M E+             +G +       
Sbjct: 221 SMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEV 280

Query: 240 -------------ITIVSILPAVANVGSLRIGKAVHGYAMR--AGFDSIVNVSTALVDMY 284
                          + S+L A AN+G+L  G+ +H Y       FD++  + TALVDMY
Sbjct: 281 FNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAV--LGTALVDMY 338

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           AKCGR++ A  VF+ M+ + V +WN+MI      G  E+A+ +F KM  Q   P  +T++
Sbjct: 339 AKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLL 398

Query: 345 EALHACADLGDLERGIFVHKLLDQL 369
             L ACA  G ++ G+ +   ++++
Sbjct: 399 GVLSACAHSGMVDEGLRIFNSMEEV 423



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 159/313 (50%), Gaps = 19/313 (6%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +VS   K   + +A  +F  + +K +  +  M+ GY K     +A+     M+ +++ P 
Sbjct: 233 MVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPR 292

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  C ++G + +G+ IH  +  N  S D    T +V+MYAKCG+++ A+ +F+
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG---- 253
           +M ++++ +WN ++ G   +G AE A++L  +M ++  R + IT++ +L A A+ G    
Sbjct: 353 KMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDE 412

Query: 254 SLRIGKAVHG-YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSM 311
            LRI  ++   Y +  G +        +VD+  + G +  A  V   M    +   W ++
Sbjct: 413 GLRIFNSMEEVYGIEPGMEHY----GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGAL 468

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTN---VTIMEALHACADLGDLERGIFVHKLLDQ 368
           + A  + G+ E   R+ + +L+  +EP N     ++  ++A A  G  +    V KL+ +
Sbjct: 469 LGACRKHGDVELGERVGKILLE--LEPQNSGRYALLSNIYARA--GRWDDVANVRKLMKE 524

Query: 369 --LKLGTDVSMTN 379
             +K  T +SM +
Sbjct: 525 RGVKTSTGISMID 537


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/781 (33%), Positives = 426/781 (54%), Gaps = 40/781 (5%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D HL    L+  + K   + +A +VF  +       Y  M+ G+AK      A+    RM
Sbjct: 122 DIHL-ANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 180

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   +    +++  +L VC  + ++  G ++H  +I  GF    F    ++ +Y KCG +
Sbjct: 181 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 240

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPA 248
           +   ++FD MP RD+ SWNT+++   +    E A +L   M   +G R D  T+ +IL A
Sbjct: 241 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 300

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
              + S+ +G+ +H + ++ GF+S ++V  AL+  Y KCG ++    +F+ M+ R+V++W
Sbjct: 301 ARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITW 359

Query: 309 NSMIAAYVEGGNPEEAMRIFQKM-------------------------------LDQGVE 337
             MI AY+E G  + A+ +F KM                               +++GVE
Sbjct: 360 TEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVE 419

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
            T+ T+   L+AC  L + +    +H  + +   G++  +  +L+ M ++C ++  A  +
Sbjct: 420 LTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKM 479

Query: 398 FSKLQGKTL--VSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKPDSFTMVSVIPALAEL 454
           FS+        + W +MI GYA+N +  EA++ FC+ + +  +  D     +V+     L
Sbjct: 480 FSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTL 539

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           +     K IH   ++S F  ++ V  ++I MY+KC  +  A  +F++M    + +WN +I
Sbjct: 540 AFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLI 599

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTSLKKDY 572
            G+  H  G  A+ +++KM +   KP+ +TF+  ISA  H  S LV+     F S+K  Y
Sbjct: 600 AGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIY 659

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            I+P ++HY ++V +LG  G L EA + I KMPIEP  +V+ A+L AC+IH N  +G++A
Sbjct: 660 HIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRA 719

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A  L  + P +   ++L++N+Y+A   W     VR  M  KG +K PG S +  +N+VHS
Sbjct: 720 AKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHS 779

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           FY+    HPQ+K I++ LE LI E   AGYVPDT+ + H+VE++ +++ L  HS K+A  
Sbjct: 780 FYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAAT 839

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +GLL + PG  I I KN+ +CGDCH   KY+S+VTGREI +RD    HCF NG CSC DY
Sbjct: 840 YGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDY 899

Query: 812 W 812
           W
Sbjct: 900 W 900



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           KAVH    +   D  ++++ AL+  Y K G V  A  VF G+   NVVS+ +MI+ + + 
Sbjct: 110 KAVHASIFKLAED--IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
               +AM IF +M   G+E    + +  L  C  L DLE G  +H ++ ++       ++
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 227

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS-KNI 437
           N+L+ +Y KC  +D    +F ++  + + SWN +I    +      A   F  MR     
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 287

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + D FT+ +++ A   L+ +   + IHA VI+  FE N+ V+ ALI  Y KCG++    A
Sbjct: 288 RIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 346

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           LF+ M  R V TW  MI  Y   GL   A+E+F+KM   P + N I++   +S    +G 
Sbjct: 347 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKM---PAR-NSISYNAILSGFCQNGE 402

Query: 558 VEEGIHYFTSLKK------DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
             + + +F  + +      D+ +  V++  G    LL  A    +   FI K        
Sbjct: 403 GSKALAFFCRMVEEGVELTDFTLTGVLNACG----LLMEAKISKQIHGFILKFGFGSNAC 458

Query: 612 VFGAMLGAC 620
           +  A+L  C
Sbjct: 459 IEAALLDMC 467



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           +LD  V   +V +++A+HA          IF        KL  D+ + N+LI  Y K   
Sbjct: 96  LLDLSVRYDDVELIKAVHA---------SIF--------KLAEDIHLANALIVAYLKLGM 138

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           V  A  +F  L    +VS+ AMI G+A++ R  +A+  F +MRS  I+ + F+ V+++  
Sbjct: 139 VPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTV 198

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
              L  +     +HA+VI+  F    FV  AL+ +Y KCG + +   LFD M  R + +W
Sbjct: 199 CIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASW 258

Query: 511 NVMIDGYGTHGLGKAAVELFNKM 533
           N +I       + + A ELF  M
Sbjct: 259 NTVISSVVKEMMYERAFELFRDM 281



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 174/379 (45%), Gaps = 30/379 (7%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  L E +   +I   I+K G       +  L+ +  +   ++DA ++F       
Sbjct: 428 VLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQ 487

Query: 103 DA--LYHTMLKGYAKFASLDDAVSFLIR------MRYDDVAPVVYNYTYLLKVCGDVGEI 154
               ++ +M+ GYA+ A  ++A+S   +      M  D VA      T +L VCG +   
Sbjct: 488 SGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAS-----TAVLGVCGTLAFH 542

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             GK+IH   + +GF  DL     ++ MY+KC  +++A K+F+ MP  D+VSWN ++AG 
Sbjct: 543 EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGH 602

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY-AMRAGF--D 271
             +   + AL + ++M + G + D +T V I+ A  +  S  +      + +M+  +  D
Sbjct: 603 LLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHID 662

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQK 330
             V   T+LV +    G +E A  + + M      S W +++ A     N     R  + 
Sbjct: 663 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKH 722

Query: 331 MLD-QGVEPTNVTIMEALHA------CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +L  + ++P+   ++  L++      C+D+   E  +   K   +    + +   N + S
Sbjct: 723 LLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRV---KGFRKHPGRSWIIHENKVHS 779

Query: 384 MYSKCKKVDRAADIFSKLQ 402
            Y++ K   +A DI S L+
Sbjct: 780 FYARDKSHPQAKDIHSGLE 798


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/576 (38%), Positives = 345/576 (59%), Gaps = 1/576 (0%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D  T+  +L   A   SL +GK+ HG A+  G  +       L+++Y KCG+ + AR VF
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  R+++SWN+MIA Y       EA+++F +M  +G + T  T+   L ACA    + 
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
               +H +  +L L +   +  + + +Y+KC  +  A  +F  +  KT V+W+++  G+ 
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           QNG   E L  F   + + ++   FT+ S++   A L++I     +HA++++  F +N+F
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V T+L+D+YAKCG +  +  +F  M E++V  WN MI  +  H     A+ LF KM +  
Sbjct: 295 VATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN++T+L  +SACSH+GLVEEG HYF  L  D   EP + HY  MVD+LGR+G+ +EA
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           W  + KMP EP  +++G++LG+ +IHKN+ L   AA +LF L+P+ GG HVLL+N+YAA+
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             W+ +   R  +   G +K  G S +E K ++H F +G  +HP    +Y  LE +  E+
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534

Query: 718 KAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           +   +  +T   +HDV    +E LL  HSEKLA AFGL++  P   I I KNLR+CGDCH
Sbjct: 535 RKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCH 594

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  K +S +T R++IVRD++RFH FK+G CSCGD+W
Sbjct: 595 SFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 207/397 (52%), Gaps = 4/397 (1%)

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
           L+R+  D +   V+    LL++C     +  GK  HG  I  G   D      ++N+Y K
Sbjct: 46  LVRVERDLID--VFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTK 103

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CGQ + A ++FD M  R ++SWNT++AG+  N     AL L +RMH EG +    T+ S 
Sbjct: 104 CGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSST 163

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A A   ++   K +H  A++   DS   V TA +D+YAKC  ++ A  VF+ M  +  
Sbjct: 164 LCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTS 223

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V+W+S+ A +V+ G  EE + +FQ    +G++ T  T+   L  CA L  +  G  VH +
Sbjct: 224 VTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAV 283

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           + +     ++ +  SL+ +Y+KC +++++ ++F+ ++ K +V WNAMI  ++++    EA
Sbjct: 284 IVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEA 343

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALID 484
           +  F KM+   I P+  T +S++ A +   ++   + + + L+     E NV   + ++D
Sbjct: 344 MILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVD 403

Query: 485 MYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           +  + G    A  L D M  E   + W  ++     H
Sbjct: 404 VLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIH 440



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 4/377 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C   + L   +    L I  GL    +    L++L+ K      A RVF+ +  + 
Sbjct: 62  LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++TM+ GY       +A+    RM  +      +  +  L  C     I   K++H 
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHT 181

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I        F  T  +++YAKC  I++A  +F+ MPE+  V+W+++ AGF QNG  E 
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
            L L      EG +    T+ SIL   A++  +  G  VH   ++ GF   + V+T+LVD
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVD 301

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +YAKCG++E +  VF  M+ +NVV WN+MIA++    +  EAM +F+KM   G+ P  VT
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVT 361

Query: 343 IMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +  L AC+  G +E G  + + LL       +V   + ++ +  +  K D A  +  K+
Sbjct: 362 YLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421

Query: 402 QGKTLVSWNAMILGYAQ 418
             +   S    +LG ++
Sbjct: 422 PFEPTASMWGSLLGSSR 438


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/571 (41%), Positives = 350/571 (61%), Gaps = 12/571 (2%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL + A  G  ++G+A H   M+ GF+  + + T L+D YAK G ++ A+ VF GM  R+
Sbjct: 16  ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRD 75

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC-ADLGDLERGIFVH 363
           VV+ N+MI+A  + G  EEA  +F  M ++     N  I      C   LGD+       
Sbjct: 76  VVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMI-----TCYCKLGDINSA---- 126

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRV 422
           +L+       DV   N++I  Y K K++  A ++F  +   +  V+WN MI  Y Q G  
Sbjct: 127 RLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEF 186

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
             A++ F +M+S+N+KP   TMVS++ A A L  +   +WIH  +     + +V +  AL
Sbjct: 187 GTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNAL 246

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           IDMY KCGA+  A  +F  ++ +++  WN +I G G +G G+ A+  F  M +   KP+ 
Sbjct: 247 IDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDG 306

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           +TF+  +S CSHSGL+  G  YF+ +   YG+EP ++HYG MVDLLGRAG L EA + I+
Sbjct: 307 VTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIR 366

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
            MP++P   V G++L AC+IHK+ +LGE+   +L ELDP +GG +V L+N+YA+ S WD 
Sbjct: 367 AMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDD 426

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +   R +M K+G+ KTPGCS +E+ N VH F +G T HPQ  +I  FL+ +  E+K  G+
Sbjct: 427 VNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGH 486

Query: 723 VPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           VP+T N +HD+E+  +E  +  HSE++A+AFGL+++ PG TI + KNLR C DCH+A K 
Sbjct: 487 VPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKL 546

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           IS    REIIVRD  RFH F+NG CSC DYW
Sbjct: 547 ISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 214/429 (49%), Gaps = 50/429 (11%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M  +DV P   +++ +L+ C   GE + G+  H Q++  GF  D+   TG+++ YAK G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           ++ A ++F  MP RD+V+ N +++  +++G+ E A +L   M E      + ++++    
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER-NSCSWNSMITCYCK 119

Query: 249 VANVGSLRIGKAVHGYAMRAGFDS--IVNVST--ALVDMYAKCGRVETARLVFDGMKS-R 303
           + ++ S R+            FD   + +V +  A++D Y K  ++  A+ +F  M S R
Sbjct: 120 LGDINSARL-----------MFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSAR 168

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N V+WN+MI+AYV+ G    A+ +FQ+M  + V+PT VT++  L ACA LG L+ G ++H
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 228

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
             +   +L  DV + N+LI MY KC  ++ A D+F  L  K +  WN++I+G   NGR  
Sbjct: 229 GYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGE 288

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
           EA+  F  M  + IKPD  T V ++   +   ++   +                  + ++
Sbjct: 289 EAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ---------------RYFSEML 333

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
            +Y                 E  V  +  M+D  G  G  K A+EL   M   P KPN +
Sbjct: 334 GVYGL---------------EPGVEHYGCMVDLLGRAGYLKEALELIRAM---PMKPNSM 375

Query: 544 TFLCAISAC 552
                + AC
Sbjct: 376 VLGSLLRAC 384



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 14/355 (3%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K G     + QT L+  + K   L  A RVF  +P +     + M+   +K   +++A
Sbjct: 36  IMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEA 95

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
            +    M   +      ++  ++     +G+I   + +     V     D+ +   +++ 
Sbjct: 96  RNLFDNMTERNSC----SWNSMITCYCKLGDINSARLMFDCNPVK----DVVSWNAIIDG 147

Query: 183 YAKCGQIEEAYKMFDRM-PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           Y K  Q+  A ++F  M   R+ V+WNT+++ + Q G    A+ +  +M  E  +   +T
Sbjct: 148 YCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVT 207

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +VS+L A A++G+L +G+ +HGY         V +  AL+DMY KCG +E A  VF G+ 
Sbjct: 208 MVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS 267

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI- 360
            +N+  WNS+I      G  EEA+  F  M  +G++P  VT +  L  C+  G L  G  
Sbjct: 268 RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR 327

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +  ++L    L   V     ++ +  +   +  A ++   +  K     N+M+LG
Sbjct: 328 YFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 378


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 376/680 (55%), Gaps = 39/680 (5%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +LF    +++  A    + +  ++F  MP+RD VS+N ++AGF+  G    A      + 
Sbjct: 75  NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134

Query: 232 EEGR-------RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            E         R   IT+  ++ A + +G   +G+ VH   MR GF +     + LVDMY
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194

Query: 285 AK-------------------------------CGRVETARLVFDGMKSRNVVSWNSMIA 313
           AK                               C  VE AR VF+ M  R+ ++W +M+ 
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
              + G   EA+ +F++M  +GV     T    L AC  L   E G  +H    +     
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           ++ + ++L+ MYSKC+ +  A  +F ++  K ++SW AMI+GY QNG   EA+  F +M+
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 374

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           +  IKP+ FT+ SVI + A L+ +      H + + S     + V +AL+ +Y KCG++ 
Sbjct: 375 TDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  LFD M      ++  ++ GY   G  K  ++LF KML    KPN +TF+  +SACS
Sbjct: 435 DAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACS 494

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
            SGLVE+G  YF S+++D+GI  + DHY  M+DL  R+GRL EA +FI++MP  P    +
Sbjct: 495 RSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGW 554

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +L AC++  ++E+G+ AA  L + DP     +VLL +++A+   W ++A +R  M  +
Sbjct: 555 ATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDR 614

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            ++K PGCS ++ KN VH F +    HP S  IY  L+ L  ++   GY PD +S+ HDV
Sbjct: 615 QVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDV 674

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
            D  + ++LS+HSEKLAIAFGL+       I + KNLRVC DCHNATK+IS +TGR+I+V
Sbjct: 675 ADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILV 734

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH F NG+CSCGD+W
Sbjct: 735 RDAVRFHKFSNGICSCGDFW 754



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 262/561 (46%), Gaps = 59/561 (10%)

Query: 42  PSALLLEVCTSLKELRRILPLIIK--SGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPI 98
           P+ +L  + T+     R LPL  +    + D +LF +  L+S       L D  R+F  +
Sbjct: 44  PTYVLNHLLTAYARSGR-LPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASM 102

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-------VAPVVYNYTYLLKVCGDV 151
           P +    Y+ ++ G++   +   A      +  ++       V P     + ++     +
Sbjct: 103 PQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASAL 162

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK-------------------------- 185
           G+   G+++H Q++  GF    F  + +V+MYAK                          
Sbjct: 163 GDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMI 222

Query: 186 -----CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
                C  +EEA  +F+ M +RD ++W T+V G  QNG    ALD+  RM  EG   D  
Sbjct: 223 TGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQY 282

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  SIL A   + +   GK +H Y +R  +D  + V +ALVDMY+KC  +  A  VF  M
Sbjct: 283 TFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             +N++SW +MI  Y + G  EEA+R+F +M   G++P + T+   + +CA+L  LE G 
Sbjct: 343 TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGA 402

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
             H +     L   ++++++L+++Y KC  ++ A  +F ++     VS+ A++ GYAQ G
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFG 462

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVM 479
           +  E ++ F KM  K +KP+  T + V+ A +   ++ +   + H++      + +  V+
Sbjct: 463 KAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQ-----QDHGIVL 517

Query: 480 -----TALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHG---LGKAAVELF 530
                T +ID+Y++ G +  A      M        W  ++      G   +GK A E  
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAE-- 575

Query: 531 NKMLEGPTKPNDITFLCAISA 551
           N +   P  P     LC++ A
Sbjct: 576 NLLKTDPQNPASYVLLCSMHA 596


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/611 (40%), Positives = 379/611 (62%), Gaps = 9/611 (1%)

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI--GKAVHGYAMRA 268
           +A F+ NG    AL    RM++ G R D +T   IL A+A +G+  I  G+ +H YA  +
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G    V V TA++ MY KCGR++ AR  F+ ++ +N V+WN+M+  Y   G   EA+ +F
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 329 QKMLDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDVSMTNSLISM 384
           ++M ++     P   +   A+ AC++L DLE+G  +H++L  +  +L  DV +  +L++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 385 YSKCKKVDRAADIFSKLQGKT-LVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSF 442
           YSKC  ++ A  +F  ++     V WNAMI  YAQ+GR  +AL+ +  M  + ++ P   
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T V+VI   AELS ++  + IHA V  + F+ N+ V  AL+ MY KCG +  A  +F  M
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
             +   +WN +I  Y  HG    A+ L+ +M     KP ++TF+  +SACSH GLV +G+
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
            YF  ++ D+ I+P + H+G ++DLLGR GRL EA   ++ MPI+     + ++LGACK 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
           H +++ G +AA+++ +  P   G +VLL+NIYAAA  W  + K+R IM  +G++K+PG S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLL 741
            +E+ + VH F SG   HPQ + IY  L  +++E+K  GYVPDT+S+ HD+E+  +E+LL
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
             HSEKLAI +G +     S + I KNLRVC DCH ATK++S +TGR+I+VRD  RFH F
Sbjct: 541 VCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLF 600

Query: 802 KNGVCSCGDYW 812
           +NG CSC DYW
Sbjct: 601 ENGSCSCRDYW 611



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 202/390 (51%), Gaps = 8/390 (2%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           I +G+EIH    ++G   ++   T V++MY KCG++++A   F+ +  ++ V+WN ++  
Sbjct: 47  IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 106

Query: 214 FAQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-- 269
           +  +G    AL+L   M E  R  R D  +    + A +N+  L  G+ +H    R G  
Sbjct: 107 YKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKE 166

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIF 328
               V V TAL++MY+KCG +E AR VFD ++   + V WN+MIAAY + G  ++A+ ++
Sbjct: 167 LHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLY 226

Query: 329 QKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           + M D   + P   T +  +  CA+L  L++G  +H  +       ++ ++N+L+ MY K
Sbjct: 227 RSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGK 286

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +D A D+F  ++ K  +SWN +I  YA +G  ++AL  + +M  + +KP   T V +
Sbjct: 287 CGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGL 346

Query: 448 IPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
           + A +   ++     + + +      + +V     +ID+  + G +  A  +   M  + 
Sbjct: 347 LSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQA 406

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           +   W  ++    THG  K  V   +++++
Sbjct: 407 NAVQWMSLLGACKTHGDLKRGVRAADQVVD 436



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 194/359 (54%), Gaps = 14/359 (3%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           SGL    +  T ++S++ K   L DA   FE +  K    ++ M+  Y       +A+  
Sbjct: 60  SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 119

Query: 126 LIRM--RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL--DLFAMTGVVN 181
              M  R     P  ++++  ++ C ++ ++ +G+EIH  L   G  L  D+   T ++N
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179

Query: 182 MYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG----RR 236
           MY+KCG +EEA K+FD +  + D V WN ++A +AQ+G  + ALDL   MH+      ++
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
           G F+T++ +    A + +L+ G+A+H       FD+ + VS ALV MY KCG ++ A  V
Sbjct: 240 GTFVTVIDV---CAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDV 296

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  MK ++ +SWN++I++Y   G+ ++A+ ++Q+M  QGV+PT VT +  L AC+  G +
Sbjct: 297 FHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLV 356

Query: 357 ERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMI 413
             G+ + +++ D  ++   V     +I +  +  ++  A  +   +  +   V W +++
Sbjct: 357 ADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLL 415



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 157/304 (51%), Gaps = 17/304 (5%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSG--LCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           ++ +E C++L++L   R I  ++ + G  L    +  T L++++ K   L +A +VF+ I
Sbjct: 138 SIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSI 197

Query: 99  PDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIR 155
               D++ ++ M+  YA+      A+  L R  +D  D+AP    +  ++ VC ++  ++
Sbjct: 198 RHDADSVCWNAMIAAYAQHGRGKQALD-LYRSMHDTTDLAPKQGTFVTVIDVCAELSALK 256

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           +G+ IH ++    F  +L     +V+MY KCG ++EA  +F  M  +D +SWNTI++ +A
Sbjct: 257 QGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYA 316

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            +G ++ AL L   M  +G +   +T V +L A ++ G +  G     Y  R   D  + 
Sbjct: 317 YHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL---DYFYRMQDDHRIK 373

Query: 276 VST----ALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            S      ++D+  + GR+  A LV   M  + N V W S++ A    G+ +  +R   +
Sbjct: 374 PSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQ 433

Query: 331 MLDQ 334
           ++D+
Sbjct: 434 VVDR 437


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/694 (35%), Positives = 389/694 (56%), Gaps = 28/694 (4%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+       +R G ++HG L   GF  D      +++MYAKCG+++ A ++F  M +R+
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVH 262
           +VSW  ++ GF Q+G A   L L+  M        +  T+ + L A      +  G  +H
Sbjct: 283 VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIH 342

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNP 321
           G  +R G++    V+++LV +Y+K GR+  AR VFD     R + +WN+MI+ Y   G+ 
Sbjct: 343 GLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHG 402

Query: 322 EEAMRIFQKML-------DQGVEPTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLG 372
            +A+ +F++M        DQ  +P   T    L AC  LG    G  VH  +        
Sbjct: 403 RDALLVFREMRRRRRRHEDQH-QPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTA 461

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           ++  +  +L+ MY KC ++  A  +F +L+ K  + W  +++G+AQ G+V EAL  F + 
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
                + D+  + S++  LA+ +++   + +H   ++S    +V    +++DMY KCG  
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLP 581

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  +F  +  R+V +W  MI+G G HGLG+ AV +F +M  G  +P+++T+L  +SAC
Sbjct: 582 DEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSAC 641

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GLV+E   YF+ +++D  + P  +HY  MVDLLGRAG L EA D I+ MP+EP + V
Sbjct: 642 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 701

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +  +L AC++HK+V +G +A + L  +D D    +V L+N++A A  W +  KVR  M +
Sbjct: 702 WQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRR 761

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTK--HPQS---KRIYTFLETLIDEIKAAGYVPD-- 725
           +GL+K  GCS VE+  EVH FY G  +  HPQ+   +R+   +ET + E    GY  D  
Sbjct: 762 RGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVRE--QLGYCADDV 819

Query: 726 TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG-------STIHIRKNLRVCGDCHNA 778
             ++HDV++  +   L +HSE+LA+   LL +            I + KNLRVCGDCH  
Sbjct: 820 QFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEF 879

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K +S V  R ++VRD +RFH F++G CSC DYW
Sbjct: 880 FKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 223/482 (46%), Gaps = 12/482 (2%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+   ++   + K G     +    L+ ++ K   L  A  VF  + D+    +  ++
Sbjct: 231 SSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALM 290

Query: 111 KGYAKFASLDDAVSFLIRMRY-DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
            G+ +       +  L  MR   + AP  Y  +  LK C    ++  G  IHG  +  G+
Sbjct: 291 VGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY 350

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVT 228
                  + +V +Y+K G+I +A ++FD     R L +WN +++G+A  G    AL +  
Sbjct: 351 EEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFR 410

Query: 229 RM------HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTAL 280
            M      HE+  + D  T  S+L A   +G+ R G  VH     +GF +  N  ++ AL
Sbjct: 411 EMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGAL 470

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMY KCGR+  A  VF+ ++ +N + W +++  + + G   EA+ +F++    G     
Sbjct: 471 VDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADA 530

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
             +   +   AD   +E+G  VH    +   GTDVS  NS++ MY KC   D A  +F +
Sbjct: 531 HVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFRE 590

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  + +VSW  MI G  ++G   EA+  F +MR+  ++PD  T ++++ A +   ++   
Sbjct: 591 IPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC 650

Query: 461 KWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYG 518
           +   + + R             ++D+  + G +  AR L   M  E  V  W  ++    
Sbjct: 651 RRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 710

Query: 519 TH 520
            H
Sbjct: 711 VH 712



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 201/427 (47%), Gaps = 24/427 (5%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  +L A A   SLR G  +HG   + GF S   +   L+DMYAKCG ++ A  VF GM+
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGI 360
            RNVVSW +++  +++ G+    +R+  +M       P   T+  +L AC    D+  G+
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQN 419
            +H L  +        + +SL+ +YSK  ++  A  +F     G+ L +WNAMI GYA  
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 420 GRVNEALNYFCKMRSKNI------KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           G   +AL  F +MR +        +PD FT  S++ A   L   R    +HA +  S F 
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 474 --KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
              N  +  AL+DMY KCG +  A  +F+ +  ++   W  ++ G+   G    A+ELF 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           +      + +       +   +   LVE+G  +H +  +K   G +  +    ++VD+  
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCY-GVKSPAGTD--VSAGNSIVDMYL 576

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL-----DPDEG 644
           + G  +EA    +++P    +  +  M+     H    LG +A     E+     +PDE 
Sbjct: 577 KCGLPDEAERMFREIPAR-NVVSWTTMINGLGKHG---LGREAVAMFEEMRAGGVEPDEV 632

Query: 645 GYHVLLA 651
            Y  LL+
Sbjct: 633 TYLALLS 639



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 23/323 (7%)

Query: 2   SSHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSL---KELRR 58
           + H +  L VF      +  HE +H   +  +          A LL+ C  L   +E  +
Sbjct: 399 AGHGRDALLVFREMRRRRRRHEDQHQPDEFTF----------ASLLKACGGLGAPREGAQ 448

Query: 59  ILPLIIKSGL--CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +   +  SG       +    LV ++ K   L  A +VFE +  K    + T++ G+A+ 
Sbjct: 449 VHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQE 508

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
             + +A+    R          +  + ++ V  D   + +G+++H   + +    D+ A 
Sbjct: 509 GQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAG 568

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +V+MY KCG  +EA +MF  +P R++VSW T++ G  ++G    A+ +   M   G  
Sbjct: 569 NSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVE 628

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS----TALVDMYAKCGRVET 292
            D +T +++L A ++ G +   +       R   D  V         +VD+  + G +  
Sbjct: 629 PDEVTYLALLSACSHAGLVDECRRYFSCIRR---DRTVRPKAEHYACMVDLLGRAGELRE 685

Query: 293 ARLVFDGMKSRNVVS-WNSMIAA 314
           AR +   M     V  W ++++A
Sbjct: 686 ARDLIRTMPMEPTVGVWQTLLSA 708


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/675 (34%), Positives = 378/675 (56%), Gaps = 9/675 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQ--TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           S++E + +  L++KS   D+ L         ++ K +    A  VF+ +P +    +  M
Sbjct: 79  SIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVM 138

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G  +     D   F   M    + P  + Y+ +++ C  +  +  GK +H Q+++ GF
Sbjct: 139 IVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGF 198

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +F  T ++NMYAK G IE++Y +F+ M E + VSWN +++G   NG    A DL  R
Sbjct: 199 ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVR 258

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M       +  T+VS+  AV  +  + +GK V   A   G +  V V TAL+DMY+KCG 
Sbjct: 259 MKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGS 318

Query: 290 VETARLVFDG--MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           +  AR VFD   +       WN+MI+ Y + G  +EA+ ++ +M   G+     T     
Sbjct: 319 LHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVF 378

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTD---VSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
           +A A    L+ G  VH ++  LK G D   VS+ N++   YSKC  ++    +F +++ +
Sbjct: 379 NAIAASKSLQFGRVVHGMV--LKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEER 436

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +VSW  ++  Y+Q+    EAL  FC MR +   P+ FT  SV+ + A L  + Y + +H
Sbjct: 437 DIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVH 496

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L+ ++  +    + +ALIDMYAKCG++  A  +FD ++   + +W  +I GY  HGL +
Sbjct: 497 GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVE 556

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A++LF +M     K N +T LC + ACSH G+VEEG+ YF  ++  YG+ P M+HY  +
Sbjct: 557 DALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACI 616

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           +DLLGR GRL++A +FI+KMP+EP   V+  +LG C++H NVELGE AA ++  + P+  
Sbjct: 617 IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYS 676

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +VLL+N Y     ++    +R +M+ +G++K PG S + +K  VH FYSG  +HPQ K
Sbjct: 677 ATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKK 736

Query: 705 RIYTFLETLIDEIKA 719
            IY  LE L ++IKA
Sbjct: 737 EIYVKLEELREKIKA 751



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 247/519 (47%), Gaps = 8/519 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPE 201
           +L+ C + G IR  K +HG ++ + F   DL  +     ++Y+KC +   A  +FD MP+
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           R++ SW  ++ G  ++G           M   G   D     +I+ +   + SL +GK V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   +  GF + + VST+L++MYAK G +E +  VF+ M   N VSWN+MI+     G  
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            EA  +F +M +    P   T++    A   L D+  G  V     +L +  +V +  +L
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309

Query: 382 ISMYSKCKKVDRAADIFSK--LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           I MYSKC  +  A  +F    +       WNAMI GY+Q+G   EAL  + +M    I  
Sbjct: 310 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 369

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF-VMTALIDMYAKCGAVGTARAL 498
           D +T  SV  A+A    +++ + +H +V++   +  V  V  A+ D Y+KCG +   R +
Sbjct: 370 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 429

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           FD M ER + +W  ++  Y    LG+ A+  F  M E    PN  TF   + +C+    +
Sbjct: 430 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 489

Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           E G      L K  G++       A++D+  + G + EA     K+   P I  + A++ 
Sbjct: 490 EYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIIS 547

Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
               H  VE   +   R+ EL   +     LL  ++A +
Sbjct: 548 GYAQHGLVEDALQLFRRM-ELSGIKANAVTLLCVLFACS 585



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFD--SIVNVSTALVDMYAKCGRVETARLVFDG 299
           ++ +L   A  GS+R  KAVHG  +++ F+   ++ +      +Y+KC     A  VFD 
Sbjct: 67  LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  RNV SW  MI    E G   +  + F +ML+ G+ P        + +C  L  LE G
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH  +      T + ++ SL++MY+K   ++ +  +F+ +     VSWNAMI G   N
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   EA + F +M++    P+ +T+VSV  A+ +L  +   K +         E NV V 
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 306

Query: 480 TALIDMYAKCGAVGTARALFD--MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           TALIDMY+KCG++  AR++FD   +N    T WN MI GY   G  + A+EL+ +M +  
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 366

Query: 538 TKPNDITFLCAISACSHSGLVEEG 561
              +  T+    +A + S  ++ G
Sbjct: 367 ITSDLYTYCSVFNAIAASKSLQFG 390


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/778 (33%), Positives = 430/778 (55%), Gaps = 13/778 (1%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS--LSDAARVFEPIPDKLDA 104
           L  C SL +   +   I ++        +  L++ +C+  +     A R+ + +P +   
Sbjct: 20  LRSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAV 79

Query: 105 LYHTMLKGYAKFASLDDAV-SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            ++ ++  Y++    ++++ +FL   R  +V    + Y   L  C   G ++ GK +H  
Sbjct: 80  SFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHAL 139

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            ++ G +  +F    +V+MYA+CG + EA ++FD   ERD VSWN++V+G+ + G  E  
Sbjct: 140 AVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEM 199

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANV-GSLR-IGKAVHGYAMRAGFDSIVNVSTALV 281
           L +   M       +   + S++   +   GS+R I +AVHG  ++AG D+ + +++A+V
Sbjct: 200 LRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMV 259

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIA------AYVEGGNPEEAMRIFQKMLDQG 335
           DMYAK G +  A  +F  +   NVV +N+MIA      A V      EA+ ++ ++  +G
Sbjct: 260 DMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRG 319

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           +EPT  T    + AC   GD+E G  +H  + +     D  + ++LI +Y     ++   
Sbjct: 320 MEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGF 379

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
             F  +  + +V+W AMI G  QN     AL  F ++    +KPD FT+ SV+ A A L+
Sbjct: 380 RCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLA 439

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           V+R  + +     +S F++   +  + I MYA+ G V  A   F  M    V +W+ +I 
Sbjct: 440 VVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIIS 499

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            +  HG  + A++ FN+M+     PN+ITFL  ++ACSH GLV+EG+ Y+  +K +YG+ 
Sbjct: 500 SHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLC 559

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P + H   +VDLLGRAGRL +A  FI+         V+ ++LG+C+IH+++E G+  A+R
Sbjct: 560 PTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADR 619

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           + EL P   G +V L N+Y  A      +K+R +M+++G++K PG S +EL++ +HSF +
Sbjct: 620 IMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVA 679

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQE-NLLSSHSEKLAIAFGL 754
           G   HP+   IYT L  ++ +I       DT+ I  VE   +E N ++ HSEKLA+A G+
Sbjct: 680 GDKSHPECNAIYTKLAEMLSKIDKL-TTTDTSCIEWVETTGREQNWMNCHSEKLAVALGI 738

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++    + I + KNLRVC DCH+  K IS    REII+RD+ RFH F++G CSCGDYW
Sbjct: 739 IHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/653 (38%), Positives = 361/653 (55%), Gaps = 32/653 (4%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A ++FDR+ +R+  SW+ +V  + QN   + AL++   M  E    D  T+ S+L A   
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS--------- 302
           +  +  G+ V   A   GF+  V V+T+L+ ++AKCG +E A  VF  M +         
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 303 ---------------------RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
                                ++VVSWN+MIAAY   G+ ++A  +F +M   G  P   
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T    L ACA    LE G  +H  +       D +M N+LISMY++C  ++ A   F  +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + K L +WN M+  YAQ  +  +AL  +  M  +   PD FT  SV+ + A L  +R  K
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
           +IH       FEK+V + TAL++MYAKCG++  A+  FD ++ + V +W+ MI     HG
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
             + A+EL + M       N++T    + ACSH G + EGI YF  L +D+GIE   ++ 
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 420

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
              +DLLGRAG L EA   +  MP +        +LG CK+H +V  G+    R+  L+P
Sbjct: 421 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEP 480

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  G +VLL N+YAAA  WD +AK+R  M KKG+++  GCS +E +++++ F  G T +P
Sbjct: 481 ENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNP 540

Query: 702 QSKRIYTFLETLIDEIK-AAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSP 759
           ++  I   LE L   +K   GYVPDT  + HDV D  +E LL  HSEK+A+ FGL+ S P
Sbjct: 541 RNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPP 600

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GST+ I KNLRVC DCH   K  S +TGR IIVRD  RFH F+ G+CSCGDYW
Sbjct: 601 GSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 183/390 (46%), Gaps = 30/390 (7%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A +VF+ I  +    +  +++ Y + A   +A+     M  ++++   Y  + +L  C  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--------- 201
           + ++  G+ +  +    GF  D+   T +++++AKCG +EEA  +F  M           
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 202 ---------------------RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
                                +D+VSWN ++A +   G  + A  L  RM   G   D  
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  SIL A A+   L  G+ +H      GFD    +   L+ MY +CG +E+AR  F  +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           + + + +WN+M+AAY +    ++A+ +++ ML +G  P   T    + +CA LG L  G 
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           F+H+         DV +  +L++MY+KC  +  A   F  +  K +VSW+AMI   AQ+G
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
              EAL     M  + I  +  T  SV+ A
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHA 390



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 154/285 (54%), Gaps = 2/285 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T ++  +C   SL D+  +F  +  K    ++ M+  Y  +    DA S   RM      
Sbjct: 119 TAMIGAYC--GSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT 176

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P +Y ++ +L  C     +  G+ +H ++   GF  D      +++MY +CG +E A + 
Sbjct: 177 PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRY 236

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  + +++L +WNT++A +AQ    + AL L   M  EG   D  T  S++ + A++G+L
Sbjct: 237 FYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL 296

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R GK +H  +   GF+  V + TALV+MYAKCG +  A+  FDG+ +++VVSW++MIAA 
Sbjct: 297 REGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAAS 356

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
            + G+ EEA+ +   M  QG+    VT    LHAC+  G L  GI
Sbjct: 357 AQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGI 401



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELR--RILPL-IIKSGLCDQHLFQTKLVSLF 82
           H +    + P  IY   S  +L  C S K L   R+L + I   G       Q  L+S++
Sbjct: 168 HRMCTLGHTPD-IYTFSS--ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMY 224

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
            +  SL  A R F  I  K    ++TML  YA+F    DA+     M  +   P  + ++
Sbjct: 225 TRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFS 284

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            ++  C  +G +R GK IH      GF  D+   T +VNMYAKCG + +A K FD +  +
Sbjct: 285 SVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK 344

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAV 261
           D+VSW+ ++A  AQ+G AE AL+L   M+ +G   + +T  S+L A ++ G L  G    
Sbjct: 345 DVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF 404

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            G +   G +     +   +D+  + G ++ A  V   M
Sbjct: 405 MGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 443


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/674 (36%), Positives = 377/674 (55%), Gaps = 41/674 (6%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LL +    GEI   +++  ++       D F+   ++++YAK G +E+   +FD MP
Sbjct: 61  HNRLLNLYAKSGEISHARKLFDEMT----QRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            RD VS+NT+++GFA NG    AL +  RM +EG +    T VS+L A   +  LR GK 
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  +       V V  AL D+YA+CG ++ AR +FD M  RNVV+WN MI+ Y++   
Sbjct: 177 IHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQ 236

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           PE+ + +F +M    ++P  VT                                    +S
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVT-----------------------------------ASS 261

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           ++  Y +   +D A  +F +++ K  V W  MI+G AQNG+  +AL  F +M  +N +PD
Sbjct: 262 VLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPD 321

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
            +T+ SV+ + A+L+ + + + +H          ++ V +AL+DMY KCG    A  +F 
Sbjct: 322 GYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFS 381

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R+V +WN MI GY  +G    A+ L+  MLE   KP+ +TF+  +SAC H+GLVEE
Sbjct: 382 TMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEE 441

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF S+   +G+EP  DHY  MV+L GR+G +++A D I  M  EP   ++  +L  C
Sbjct: 442 GKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVC 501

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            +  +++ GE AA  L EL+P     +++L+N+YAA   W  +A +R++M+ K ++K   
Sbjct: 502 VMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSA 561

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
            S +E+ NEVH F +    HP +K I+  L  LI +++ AG+ P+TN + HD  +  +  
Sbjct: 562 YSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLE 621

Query: 740 LLSSHSEKLAIAFGLLNSSPGST-IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            ++ HSEKLA+A+GL+    G T I I KN+R C DCH   K++S +T R +I+RD +RF
Sbjct: 622 SINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRF 681

Query: 799 HCFKNGVCSCGDYW 812
           H F  G CSC DYW
Sbjct: 682 HHFVEGKCSCKDYW 695



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 232/489 (47%), Gaps = 78/489 (15%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++SL+ K   + D   +F+ +P +    Y+T++ G+A       A+   +RM+ + + P 
Sbjct: 95  MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y +  +L  C  + ++RRGK+IHG++I+     ++F    + ++YA+CG+I++A ++FD
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           RM  R++V+WN +++G+ +N   E  +DL   M     + D +T  S+L A         
Sbjct: 215 RMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA--------- 265

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                     Y + G ++ AR VF  ++ ++ V W  MI    +
Sbjct: 266 --------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQ 299

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E+A+ +F +ML +   P   TI   + +CA L  L  G  VH     + +  D+ +
Sbjct: 300 NGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLV 359

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           +++L+ MY KC     A  IFS +Q + +VSWN+MI GYA NG+  EAL+ +  M  +N+
Sbjct: 360 SSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENL 419

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KPDS T V V+ A            +HA                        G V   + 
Sbjct: 420 KPDSVTFVGVLSAC-----------VHA------------------------GLVEEGKE 444

Query: 498 LFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            F  M+++H        +  M++ +G  G    AV+L + M +   +PN + +   +S C
Sbjct: 445 YFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQ---EPNSLIWTTVLSVC 501

Query: 553 SHSGLVEEG 561
              G ++ G
Sbjct: 502 VMKGDIKHG 510



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 126/257 (49%), Gaps = 2/257 (0%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           S L    +  + ++  + +   + +A +VF  I +K +  +  M+ G A+    +DA+  
Sbjct: 250 SNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLL 309

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M  ++  P  Y  + ++  C  +  +  G+ +HG+  + G + DL   + +V+MY K
Sbjct: 310 FSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCK 369

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG   +A+ +F  M  R++VSWN+++ G+A NG    AL L   M EE  + D +T V +
Sbjct: 370 CGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGV 429

Query: 246 LPAVANVGSLRIGKAVH-GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR- 303
           L A  + G +  GK      + + G +   +    +V+++ + G ++ A  +   M    
Sbjct: 430 LSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEP 489

Query: 304 NVVSWNSMIAAYVEGGN 320
           N + W ++++  V  G+
Sbjct: 490 NSLIWTTVLSVCVMKGD 506


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/670 (35%), Positives = 375/670 (55%), Gaps = 14/670 (2%)

Query: 157 GKEIHGQLIVNGFS--------LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           GK IH QL++   S         ++  +  ++N+Y KC ++  A  +FD M  R +VS+N
Sbjct: 31  GKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYN 90

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++ G+  +G     + L   M     + +     ++L A A+ G +  G   HG+  + 
Sbjct: 91  VLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKF 150

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGM-----KSRNVVSWNSMIAAYVEGGNPEE 323
           G      V ++LV MY+KC  V+ A  V +          +   +NS++ A VE G   E
Sbjct: 151 GLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGE 210

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +  +M+D+GV   +VT +  +  C  + DL  G+ VH  L +  L  DV + + L+ 
Sbjct: 211 AVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVD 270

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           M+ KC  V  A  +F  LQ + +V W +++  Y QNG   E LN    M  +    + FT
Sbjct: 271 MFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
              ++ A A ++ +R+   +HA V +   +  V V  ALI+MY+KCG + ++  +F  M 
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR 390

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            R + TWN MI GY  HGLGK A+ LF  ML     PN +TF+  +SAC+H  LV EG +
Sbjct: 391 NRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFY 450

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           Y   L K + +EP ++HY  +V +L RAG L EA +F++   ++  +  +  +L AC IH
Sbjct: 451 YLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           +N  LG K A  + ++DP + G + LL+N+YA A  WD +  +R +M ++ ++K PG S 
Sbjct: 511 RNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           +E++N VH F S  + HP+  +IY  ++ L++ IK  GYVP+  ++ HDVED  +E+ L+
Sbjct: 571 IEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLN 630

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLAIA+GL+     + I + KNLR+C DCH A K IS VT R IIVRD  RFH F+
Sbjct: 631 YHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFR 690

Query: 803 NGVCSCGDYW 812
           +G C+C D+W
Sbjct: 691 DGTCTCTDHW 700



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 223/452 (49%), Gaps = 7/452 (1%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
             L++L+ K + L  A  +F+ +  +    Y+ ++ GY       + V     M      
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  Y +T +L  C   G +  G + HG L   G     F  + +V+MY+KC  ++ A ++
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178

Query: 196 FDRM-----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
            +        + D   +N+++    ++G    A++++ RM +EG   D +T VS++    
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
            +  L +G  VH   ++ G    V V + LVDM+ KCG V +AR VFDG+++RNVV W S
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           ++ AY++ G  EE + +   M  +G      T    L+A A +  L  G  +H  +++L 
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLG 358

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           +   V + N+LI+MYSKC  +D + D+F  ++ + +++WNAMI GY+Q+G   +AL  F 
Sbjct: 359 IKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQ 418

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            M S    P+  T V V+ A A L+++     +++ L+     E  +   T ++ +  + 
Sbjct: 419 DMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRA 478

Query: 490 GAVGTARALFDMMNER-HVTTWNVMIDGYGTH 520
           G +  A         +  V  W V+++    H
Sbjct: 479 GMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 192/359 (53%), Gaps = 7/359 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP----IPDKLDAL-YHTMLKGYAKF 116
            + K GL   H  ++ LV ++ K   +  A +V E     I +  DA  Y+++L    + 
Sbjct: 146 FLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVES 205

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
             L +AV  L RM  + V      Y  ++ +CG + ++  G ++H QL+  G + D+F  
Sbjct: 206 GRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG 265

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +V+M+ KCG +  A K+FD +  R++V W +++  + QNG  E  L+L++ M  EG  
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTM 325

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            +  T   +L A A + +LR G  +H    + G  + V V  AL++MY+KCG ++++  V
Sbjct: 326 SNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDV 385

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           F  M++R++++WN+MI  Y + G  ++A+ +FQ ML  G  P +VT +  L ACA L  +
Sbjct: 386 FFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALV 445

Query: 357 ERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMI 413
             G  ++++L+   K+   +     ++++  +   ++ A +     Q K  +V+W  ++
Sbjct: 446 NEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLL 504


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/574 (40%), Positives = 357/574 (62%), Gaps = 5/574 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK---CGRVETARLVFDGM 300
           S+L  +    SL+  K +  ++++    + + + T L++   +      ++ A  +F+ +
Sbjct: 28  SLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAI 87

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
              ++V +NSM   Y     P +A+ +F K L+  + P + T    L AC      ++G 
Sbjct: 88  PQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGK 147

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H L  +L L  +  +  +LI+MY+ C  VD A  +F ++    +VS+NA+I GYA++ 
Sbjct: 148 QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSS 207

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           R NEAL+ F +++++ +KP+  T++SV+ + A L  +   KWIH  V ++  +K V V T
Sbjct: 208 RPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNT 267

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           ALIDMYAKCG++  A ++F+ M+ R    W+ MI  Y  HG G+  + +F +M     +P
Sbjct: 268 ALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQP 327

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           ++ITFL  + ACSH+GLV+EG  YF S+ + YGI P + HYG MVDLLGRAG L+EA+ F
Sbjct: 328 DEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKF 387

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I ++PI+P   ++  +L +C  H N+EL ++  N++ ELD   GG +V+L+N+ A A  W
Sbjct: 388 IDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKW 447

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
           + +  +R +M  KG  K PGCS +E+ N VH F+SG   H  S  ++  L+ L+ E+K+ 
Sbjct: 448 EDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSV 507

Query: 721 GYVPDTNSI--HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           GYVPDT+ +   D+ED  +E  L  HSEKLAI+FGLLN+ PG+TI + KNLRVCGDCH+A
Sbjct: 508 GYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSA 567

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            K IS +  REII+RD+ RFH FK+G CSCGDYW
Sbjct: 568 AKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 187/325 (57%), Gaps = 7/325 (2%)

Query: 41  HPSALL--LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN----SLSDAARV 94
           +PS+LL  L  CTSLKEL++I    IK+ L +     TKL++  C  N    S+  A ++
Sbjct: 25  YPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLIN-SCTQNPTTASMDYAHQL 83

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           FE IP     L+++M +GY++  +   A+S  I+    ++ P  Y +  LLK C      
Sbjct: 84  FEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           ++GK++H   I  G + + +    ++NMYA C  ++ A ++FD + E  +VS+N I+ G+
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           A++     AL L  ++     + + +T++S+L + A +G+L +GK +H Y  + G D  V
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYV 263

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            V+TAL+DMYAKCG ++ A  VF+ M  R+  +W++MI AY   G  ++ M +F++M   
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARA 323

Query: 335 GVEPTNVTIMEALHACADLGDLERG 359
            V+P  +T +  L+AC+  G ++ G
Sbjct: 324 KVQPDEITFLGLLYACSHTGLVDEG 348


>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
 gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 603

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/569 (40%), Positives = 352/569 (61%), Gaps = 6/569 (1%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNV 305
           ++   SLR    +  YA+++  + +  V+  L++   +      +  AR +F+ M   ++
Sbjct: 36  ISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDI 94

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V +NSM   Y    NP E   +F ++L+ G+ P N T    L ACA    LE G  +H L
Sbjct: 95  VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +L L  +V +  +LI+MY++C+ VD A  +F ++    +V +NAMI GYA+  R NEA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L+ F +M+ K +KP+  T++SV+ + A L  +   KWIH    +  F K V V TALIDM
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           +AKCG++  A ++F+ M  +    W+ MI  Y  HG  + ++ +F +M     +P++ITF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  ++ACSH+G VEEG  YF+ +   +GI P + HYG+MVDLL RAG L +A++FI K+P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I P   ++  +L AC  H N++L EK + R+FELD   GG +V+L+N+YA    W+ +  
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDS 454

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R +M+ +   K PGCS +E+ N VH F+SG      + +++  L+ ++ E+K +GYVPD
Sbjct: 455 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514

Query: 726 TNSI--HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           T+ +   ++ D  +E  L  HSEKLAI FGLLN+ PG+TI + KNLRVC DCHNA K IS
Sbjct: 515 TSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLIS 574

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+ GR++++RD+ RFH F++G CSCGD+W
Sbjct: 575 LIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 221/408 (54%), Gaps = 9/408 (2%)

Query: 24  HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
           H  T ++ + I +   ++P  LL+  C SL+EL +I    IKS + D   F  KL++ FC
Sbjct: 14  HAETFTKHSKIDTVNTQNP-ILLISKCNSLRELMQIQAYAIKSHIEDVS-FVAKLIN-FC 70

Query: 84  KYN----SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
             +    S+S A  +FE + +    ++++M +GY++F +  +  S  + +  D + P  Y
Sbjct: 71  TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            +  LLK C     +  G+++H   +  G   +++    ++NMY +C  ++ A  +FDR+
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            E  +V +N ++ G+A+      AL L   M  +  + + IT++S+L + A +GSL +GK
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H YA +  F   V V+TAL+DM+AKCG ++ A  +F+ M+ ++  +W++MI AY   G
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMT 378
             E++M +F++M  + V+P  +T +  L+AC+  G +E G  +  +++ +  +   +   
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370

Query: 379 NSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEA 425
            S++ + S+   ++ A +   KL    T + W  ++   + +  ++ A
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 180/346 (52%), Gaps = 2/346 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ M E D+V +N++  G+++         L   + E+G   D  T  S+L A A 
Sbjct: 82  ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +L  G+ +H  +M+ G D  V V   L++MY +C  V++AR VFD +    VV +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y     P EA+ +F++M  + ++P  +T++  L +CA LG L+ G ++HK   +   
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
              V +  +LI M++KC  +D A  IF K++ K   +W+AMI+ YA +G+  +++  F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           MRS+N++PD  T + ++ A +    +    K+   +V +     ++    +++D+ ++ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381

Query: 491 AVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKMLE 535
            +  A    D +        W +++    +H     A ++  ++ E
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/792 (33%), Positives = 411/792 (51%), Gaps = 112/792 (14%)

Query: 133 DVAPVVYNYTYLLKVCG--DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           D+  +   Y   L++C   D       + +H  +I +GF      +  ++ MY K   + 
Sbjct: 6   DIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVV 65

Query: 191 EAYKMFDRMPE---------------------------------RDLVSWNTIVAGFAQN 217
            A ++F+ +P                                  RD V +N ++ G+A N
Sbjct: 66  YARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHN 125

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPA-VANVGSLRIGKAVHGYAMRAGFDSI-VN 275
           G    AL+L   M  +  R D  T  S+L A V  VG+ +    +H   ++ G   +  +
Sbjct: 126 GDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS 185

Query: 276 VSTALVDMYAK--------CGRVETARLVFDGMKSRNVVS-------------------- 307
           V  AL+ +Y K        C  + +AR +FD M  R+ ++                    
Sbjct: 186 VLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREV 245

Query: 308 -----------WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                      WN+MI+ YV  G  +EA+ + +KM   G++  ++T    + ACA++G  
Sbjct: 246 FEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSF 305

Query: 357 ERGIFVHKLLDQLKLGTD----VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           + G  +H  + + +L  +    +S++N+LI++Y K  KVD A  IF  +  + +++WNA+
Sbjct: 306 QMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAI 365

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNI-------------------------------KPDS 441
           + GY   GR+ EA ++F +M  KN+                               +P  
Sbjct: 366 LSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCD 425

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           F     + A + L  +   + +HA ++   +E ++ V  A+I MYAKCG V  A ++F  
Sbjct: 426 FAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVT 485

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M    + +WN MI   G HG G  A+ELF++ML+    P+ ITFL  ++ACSH+GLVE+G
Sbjct: 486 MPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKG 545

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            HYF S+ + YGI P  DHY  MVDL  RAG  + A   I  MP +PG  V+ A+L  C+
Sbjct: 546 RHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCR 605

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH N++LG +AA +LF+L P   G +VLL+NIYA    W+ +AKVR +M  + ++K P C
Sbjct: 606 IHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPAC 665

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E++N+VH F      HP+   +Y +LE L  E+K  GY+PDT  + HD+E   +E+ 
Sbjct: 666 SWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHA 725

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           LS+HSEKLA+ FG++   P +T+ + KN+R+CGDCHNA K++S V  REIIVRD  RFH 
Sbjct: 726 LSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHH 785

Query: 801 FKNGVCSCGDYW 812
           FKNG CSC DYW
Sbjct: 786 FKNGDCSCRDYW 797



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 255/560 (45%), Gaps = 97/560 (17%)

Query: 75  QTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +T L++ +C   +L     +F   P+  +    Y+ M+ GYA       A+     MR D
Sbjct: 82  RTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRD 141

Query: 133 DVAPVVYNYTYLLK-VCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTGVVNMYAK----- 185
           D  P  + +T +L  +   VG  ++  ++H  ++  G   +    +  ++++Y K     
Sbjct: 142 DFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201

Query: 186 ---CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN------------------------- 217
              C  +  A K+FD MP+RD ++W T++ G+ +N                         
Sbjct: 202 GIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMI 261

Query: 218 ------GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
                 G  + AL L  +M   G + D IT  +I+ A ANVGS ++GK +H Y ++   +
Sbjct: 262 SGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELN 321

Query: 272 S----IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA--- 324
                 ++VS AL+ +Y K  +V+ AR +F  M  RN+++WN++++ YV  G  EEA   
Sbjct: 322 PNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSF 381

Query: 325 ----------------------------MRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                                       +++F++M   G EP +     AL AC+ LG L
Sbjct: 382 FEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGAL 441

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
           E G  +H  L  L   + +S+ N++ISMY+KC  V+ A  +F  +    LVSWN+MI   
Sbjct: 442 ENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAAL 501

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR-----YAKWIHALVIRSC 471
            Q+G   +A+  F +M  + + PD  T ++V+ A +   ++      +   + +  I  C
Sbjct: 502 GQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPC 561

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-VTTWNVMIDGYGTHG---LG-KAA 526
            +        ++D++ + G    AR + D M  +     W  ++ G   HG   LG +AA
Sbjct: 562 EDH----YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617

Query: 527 VELFNKMLEGPTKPNDITFL 546
            +LF  M +     ND T++
Sbjct: 618 EQLFKLMPQ-----NDGTYV 632



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 203/427 (47%), Gaps = 44/427 (10%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C+++   R++   + K       L  T +++ + + + L+ A  VFE + + L A ++ M
Sbjct: 205 CSAMVSARKLFDEMPKR----DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAM 260

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + GY       +A++   +MR+  +      YT ++  C +VG  + GK++H  ++ N  
Sbjct: 261 ISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNEL 320

Query: 170 ----SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF----------- 214
               S  L     ++ +Y K  +++EA K+F  MP R++++WN I++G+           
Sbjct: 321 NPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKS 380

Query: 215 --------------------AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
                               AQNGF +  L L  +M  +G           L A + +G+
Sbjct: 381 FFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGA 440

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  G+ +H   +  G++S ++V  A++ MYAKCG VE A  VF  M S ++VSWNSMIAA
Sbjct: 441 LENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA 500

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGT 373
             + G+  +A+ +F +ML +GV P  +T +  L AC+  G +E+G  + + +L+   +  
Sbjct: 501 LGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITP 560

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVN---EALNYF 429
                  ++ ++ +      A  +   +  K     W A++ G   +G ++   EA    
Sbjct: 561 CEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620

Query: 430 CKMRSKN 436
            K+  +N
Sbjct: 621 FKLMPQN 627


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/686 (36%), Positives = 394/686 (57%), Gaps = 20/686 (2%)

Query: 8   QLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSG 67
           ++  FT +T  +      +  S   Y  SR    P  LLL  CT++  LR+   ++  +G
Sbjct: 28  RMRCFTFTTIQELNLPEDNDESSLNYAASR----PCFLLLSKCTNIDSLRQAHGVLTGNG 83

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL- 126
           L       TKLVSL+  +    DA  VF+ IP+    L+  +L+ Y       + + F  
Sbjct: 84  LMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYD 143

Query: 127 IRMR----YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           + M+    YDD+      ++  LK C +V ++  GK+IH Q IV   S D   +TG+++M
Sbjct: 144 LLMKHGFGYDDIV-----FSKALKACTEVQDLDNGKKIHCQ-IVKVPSFDNVVLTGLLDM 197

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG+I+ +YK+F+ +  R++V W +++AG+ +N   E  L L  RM E    G+  T 
Sbjct: 198 YAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTY 257

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            +++ A   + +L  GK  HG  +++G +    + T+L+DMY KCG +  AR VF+    
Sbjct: 258 GTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 317

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            ++V W +MI  Y   G+  EA+ +FQKM   G++P  VTI   L  C  +G+LE G  +
Sbjct: 318 VDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSI 377

Query: 363 HKLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGR 421
           H L   +K+G  D ++ N+L+ MY+KC +   A  +F     K +V+WN++I G++QNG 
Sbjct: 378 HGL--SIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 435

Query: 422 VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVM 479
           ++EAL  F +M ++++ P+  T+ S+  A A L  +     +HA  ++  F    +V V 
Sbjct: 436 IHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVG 495

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           TAL+D YAKCG   +AR +FD + E++  TW+ MI GYG  G  K ++ELF +ML+   K
Sbjct: 496 TALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQK 555

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN+ TF   +SACSH+G+V EG  YF+S+ KDY   P   HY  MVD+L RAG L +A D
Sbjct: 556 PNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALD 615

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            I+KMPI+P +  FGA L  C +H   +LGE    ++ +L PD+  Y+VL++N+YA+   
Sbjct: 616 IIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGR 675

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVE 685
           W +  +VR +M+++GL K  G S++E
Sbjct: 676 WSQAKEVRNLMKQRGLSKIAGHSIME 701


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 394/687 (57%), Gaps = 20/687 (2%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           T L+  C  +  +  G+ +H  LI+ GF  D+   T ++ MYAKCG +++A ++F+ M  
Sbjct: 34  TSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEI 93

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +DL +W++I+A +A+ G  E+A+ L  RM  EG   + +T    L   A+V  L  G+A+
Sbjct: 94  KDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 153

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   + +       +  +L++MY KC  +  AR VF+GMK+RNV S+ +MI+AYV+ G  
Sbjct: 154 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 213

Query: 322 EEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EA+ +F +M   + +EP   T    L A   LG+LE+G  VH+ L      T+V + N+
Sbjct: 214 AEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNA 273

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L++MY KC     A  +F  +  + ++SW +MI  YAQ+G   EALN F +M   +++P 
Sbjct: 274 LVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPS 330

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             +  S + A A L  +   + IH  V+ +    +  + T+L+ MYA+CG++  AR +F+
Sbjct: 331 GVSFSSALNACALLGALDEGREIHHRVVEANL-ASPQMETSLLSMYARCGSLDDARRVFN 389

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R   + N MI  +  HG  K A+ ++ KM +     + ITF+  + ACSH+ LV +
Sbjct: 390 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVAD 449

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
              +  SL  D+G+ P+++HY  MVD+LGR+GRL +A + ++ MP +     +  +L  C
Sbjct: 450 CRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGC 509

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           K H +++ GE+AA ++FEL P E   +V L+N+YAAA  +D   +VR  ME++G+ +   
Sbjct: 510 KRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVA 569

Query: 681 CSLVELKNEVHSFYSGSTKHPQS-------KRIYTFLETLIDEIKAAGYVPDTNSIHDVE 733
            S +E+ NE+H F SG     Q        +R+ + L  L++ +K AGYVPDT  ++  +
Sbjct: 570 VSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQ 629

Query: 734 DYV-----QENLLSSHSEKLAIAFGLLNSS-PGSTIHIR--KNLRVCGDCHNATKYISLV 785
             V     ++  L  HSE+LAIA+GL+ +  P  +  +R   + RVC  CH+A K +S +
Sbjct: 630 QGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDI 689

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
           T + I VRD  RFH F+ G CSCGD+W
Sbjct: 690 TEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/482 (33%), Positives = 258/482 (53%), Gaps = 10/482 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  CT L+ L   RR+   +I +G       +T L+ ++ K  SL DA RVFE +  K 
Sbjct: 36  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +++  YA+    + AV    RM  + V P V  +   L  C  V  +  G+ IH 
Sbjct: 96  LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++ +    D      ++NMY KC ++ EA K+F+ M  R++ S+  +++ + Q G    
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215

Query: 223 ALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           AL+L +RM + E    +  T  +IL AV  +G+L  G+ VH +    GFD+ V V  ALV
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY KCG    AR VFD M +RNV+SW SMIAAY + GNP+EA+ +F++M    VEP+ V
Sbjct: 276 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 332

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +   AL+ACA LG L+ G  +H  + +  L +   M  SL+SMY++C  +D A  +F+++
Sbjct: 333 SFSSALNACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRM 391

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + +   S NAMI  + Q+GR  +AL  + KM  + I  D  T VSV+ A +  S++   +
Sbjct: 392 KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCR 451

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            ++ +LV+       V     ++D+  + G +G A  L + M  +     W  ++ G   
Sbjct: 452 DFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKR 511

Query: 520 HG 521
           HG
Sbjct: 512 HG 513



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 233/436 (53%), Gaps = 11/436 (2%)

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           ++A   + G    AL+L   M E G   D   + S++ A   + +L  G+ +H + +  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           F + + + TAL+ MYAKCG ++ A+ VF+GM+ +++ +W+S+IAAY   G  E A+ +++
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           +M+ +GVEP  VT   AL  CA +  L  G  +H+ +   K+  D  + +SL++MY KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVI 448
           ++  A  +F  ++ + + S+ AMI  Y Q G   EAL  F +M + + I+P+++T  +++
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A+  L  +   + +H  +    F+ NV V  AL+ MY KCG+   AR +FD M  R+V 
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +W  MI  Y  HG  + A+ LF +M     +P+ ++F  A++AC+  G ++EG      +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            +     P M+   +++ +  R G L++A     +M      +   AM+ A   H     
Sbjct: 358 VEANLASPQME--TSLLSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHGR--- 411

Query: 629 GEKAANRLFELDPDEG 644
            +K A R++     EG
Sbjct: 412 -KKQALRIYRKMEQEG 426


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 353/592 (59%), Gaps = 34/592 (5%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L+ GK VH +   +G   +  +S  L+DMYAKCG +  A  VFD M  R++ SWN MI+
Sbjct: 134 ALKEGKQVHAHIKTSGSIGLY-ISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMIS 192

Query: 314 AYVEGGN-------------------------------PEEAMRIFQKMLDQGVEPTN-V 341
            YV+GGN                               PEEA+ +++ M       +N  
Sbjct: 193 GYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKC 252

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           TI  AL A A +  L  G  +H  + ++ L +D  +  SL+ MY KC  ++ A  IF K+
Sbjct: 253 TISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKM 312

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +VSW  MI  Y +NGR  E    F  + + NI P+ FT   V+ A A+L+     K
Sbjct: 313 EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGK 372

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IHA ++R  F+      +AL+ MY+KCG +  A+++F+++ +  + +W  ++ GY  HG
Sbjct: 373 QIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHG 432

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
               A+  F  +L+  TKP+ I F+  +SAC+H+GLV++G+ YF S+K+ +G+   +DHY
Sbjct: 433 QHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHY 492

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             ++DLL RAG+  EA   I +MPI+P   ++ A+LG C+IH N+EL ++AA  LFE++P
Sbjct: 493 ACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEP 552

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +    +V LANIYA+A M  + A +R  M+ +G+ K PG S +E++ EVH F  G   HP
Sbjct: 553 ENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHP 612

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +SK I  +L  L   +K  GYVPDTN + HDVE   +E  LS HSEKLA+AFG++++  G
Sbjct: 613 KSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSG 672

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I + KNLR C DCHNA K+IS +TGR+IIVRD +RFHCF+ G CSC DYW
Sbjct: 673 TPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 236/462 (51%), Gaps = 47/462 (10%)

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
           + L +AV  L R+      P    Y  LLK C     ++ GK++H  +  +G S+ L+  
Sbjct: 102 SRLREAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYIS 156

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH----- 231
             +++MYAKCG + +A K+FD M  RDL SWN +++G+ + G  E A +L  +M      
Sbjct: 157 NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNF 216

Query: 232 ---------------EEG-------RRGDF-----ITIVSILPAVANVGSLRIGKAVHGY 264
                          EE        ++ D+      TI S L A A + SL +GK +HG+
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            MR G DS   V  +L+DMY KCG +E AR +FD M+ R+VVSW +MI  Y++ G  EE 
Sbjct: 277 IMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEG 336

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
             +F+ +++  + P + T    L+ACADL   + G  +H  + ++   +  S  ++L+ M
Sbjct: 337 FALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHM 396

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           YSKC  ++ A  +F  L    L SW ++++GYAQ+G+ ++AL++F  +     KPD    
Sbjct: 397 YSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAF 456

Query: 445 VSVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM- 502
           + V+ A A   ++ +  ++ H++  +    + +     +ID+ A+ G    A ++ + M 
Sbjct: 457 IGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMP 516

Query: 503 --NERHVTTWNVMIDGYGTHG----LGKAAVELFNKMLEGPT 538
              ++++  W  ++ G   HG      +AA  LF    E P 
Sbjct: 517 IKPDKYI--WAALLGGCRIHGNLELAKRAAKSLFEIEPENPA 556



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 201/421 (47%), Gaps = 46/421 (10%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C    +LKE +++   I  SG    ++   +L+ ++ K  SL DA +VF+ +  + 
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSGSIGLYI-SNRLLDMYAKCGSLVDAEKVFDEMVHRD 183

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-------------- 148
              ++ M+ GY K  + + A +   +M   D     +++T ++  C              
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMPNRD----NFSWTAIISGCVQHNRPEEALELYR 239

Query: 149 ----------------------GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
                                   +  +  GK+IHG ++  G   D      +++MY KC
Sbjct: 240 LMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC 299

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G IEEA  +FD+M ERD+VSW T++  + +NG  E    L   +       +  T   +L
Sbjct: 300 GSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVL 359

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A++ +  +GK +H Y +R GFDS  + ++ALV MY+KCG +E A+ VF+ +   ++ 
Sbjct: 360 NACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLF 419

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKL 365
           SW S++  Y + G  ++A+  F+ +L  G +P  +  +  L ACA  G +++G+ + H +
Sbjct: 420 SWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSI 479

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMILGYAQNGRVNE 424
            ++  L   +     +I + ++  +   A  I +++  K     W A++ G   +G +  
Sbjct: 480 KEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLEL 539

Query: 425 A 425
           A
Sbjct: 540 A 540



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 142/291 (48%), Gaps = 4/291 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL   ++I   I++ GL    +    L+ ++ K  S+ +A  +F+ + ++    + TM+ 
Sbjct: 266 SLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIH 325

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y K    ++  +    +   ++ P  + +  +L  C D+     GK+IH  ++  GF  
Sbjct: 326 TYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDS 385

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
              A + +V+MY+KCG IE A  +F+ +P+ DL SW +++ G+AQ+G  + AL     + 
Sbjct: 386 FSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLL 445

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           + G + D I  + +L A A+ G +  G +  H    + G    ++    ++D+ A+ G+ 
Sbjct: 446 KSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQF 505

Query: 291 ETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
             A  + + M  + +   W +++      GN E A R  + + +  +EP N
Sbjct: 506 TEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE--IEPEN 554


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 392/698 (56%), Gaps = 8/698 (1%)

Query: 36  SRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQH--LFQTKLVSLFCKYNSLSD 90
           S +   P   LL  C     LK+ + +   ++KS   + H  +    +   + K + +  
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A R+F+ +  +    +  ++ G A+     D   F   M+   + P  + Y+ +L++C  
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +  I  G  +H Q+++ GF+   F  T ++NMYAK  +IE++YK+F+ M E ++VSWN +
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + GF  N     A DL  RM  EG   D  T + +  A+  +  +   K V GYA+  G 
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDG--MKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           DS   V TAL+DM +KCG ++ AR +F+   +  R    WN+MI+ Y+  G  E+A+ +F
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTNSLISMYSK 387
            KM    +   + T     +A A L  L  G  VH    +  L  + VS++N++ + Y+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  ++    +F++++ + L+SW +++  Y+Q    ++A+  F  MR++ I P+ FT  SV
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + + A L ++ Y + +H ++ +   + +  + +AL+DMYAKCG +G A+ +F+ ++    
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +W  +I G+  HG+   A++LF +M++   +PN +TFLC + ACSH GLVEEG+ YF  
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           +KK YG+ P M+HY  +VDLL R G LN+A +FI +MP+EP   V+  +LGAC++H NVE
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LGE AA ++     +    +VLL+N Y  +  +     +R +M+++G++K PGCS + + 
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
             +H FY+G  +HP+  +IY  LE L  ++ +   VPD
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPD 761


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/610 (40%), Positives = 357/610 (58%), Gaps = 7/610 (1%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNT +   A+      AL L  +M   G R +  T    L + A +    +G   HG   
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNV-VSWNSMIAAYVEGGNPEEA 324
           + G      V T L+ MY K   V+ AR VF+    SR + V +N++++ YV      +A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F++M ++GV   +VT++  + AC    +LE G  +H    +    +DVS+ N  I+M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  V+ A  +F ++  K L+SWNAM+ GYAQNG     L  +  M    + PD  T+
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           V V+ + A L        +   +  S F  N F+  ALI+MYA+CG +  A+A+FD M E
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R + +W  +I GYG HG G+ AV+LF +M+    +P+   F+C +SACSH+GL ++G+ Y
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +K++Y +EP  +HY  MVDLLGRAGRL EA   I+ MPI+P   V+GA+LGACKIHK
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           NVEL E A  R+ EL+P+  GY+VLL+NIY+ A+    + ++R +M++K L+K PGCS V
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENL--LS 742
           ELK  VH F  G   H QS  IY  LE L   I      P+ +   + E+  ++    + 
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD---NREESNKDGFTRVG 544

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLA+AFGLLN++ G+ + I KNLR+C DCH   K +S +  R++ VRD  RFH F+
Sbjct: 545 VHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFR 604

Query: 803 NGVCSCGDYW 812
           NG CSC DYW
Sbjct: 605 NGSCSCKDYW 614



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 224/455 (49%), Gaps = 6/455 (1%)

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           + L   ++T L+  AK      A+S   +M      P  + + + LK C  +     G +
Sbjct: 2   NALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 61

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-MPERDL-VSWNTIVAGFAQN 217
            HGQ+   G   + F  TG+++MY K   ++ A K+F+     R L V +N +V+G+  N
Sbjct: 62  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 121

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                A+ L  +M+EEG   + +T++ ++PA  +  +L +G ++H   ++ GFDS V+V 
Sbjct: 122 SKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 181

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
              + MY KCG V  A+ +FD M  + ++SWN+M++ Y + G     + +++ M   GV 
Sbjct: 182 NCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH 241

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  VT++  L +CA+LG    G  V   +      ++  + N+LI+MY++C  + +A  +
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  +TLVSW A+I GY  +G    A+  F +M    I+PD    V V+ A +   + 
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 361

Query: 458 RYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
                   ++ R+   E      + ++D+  + G +  A+ L + M  +     W  ++ 
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
               H   + A   F +++E   +P +I +   +S
Sbjct: 422 ACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 454



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 168/317 (52%), Gaps = 5/317 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI--PDKLDALYHTMLKGYAKFASLD 120
           I K G   +   QT L+S++CK + + +A +VFE      KL   Y+ ++ GY   +   
Sbjct: 66  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           DAV    +M  + V         L+  C     +  G  +H   +  GF  D+  +   +
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY KCG +  A K+FD MP + L+SWN +V+G+AQNG A   L+L   M   G   D +
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+V +L + AN+G+  +G  V      +GF S   ++ AL++MYA+CG +  A+ VFDGM
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             R +VSW ++I  Y   G+ E A+++F++M+  G+EP     +  L AC+  G  ++G+
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365

Query: 361 FVHKLLD---QLKLGTD 374
              K++    QL+ G +
Sbjct: 366 EYFKMMKRNYQLEPGPE 382


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/797 (32%), Positives = 406/797 (50%), Gaps = 120/797 (15%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           DV  + Y Y   L        I R   +H  ++ +GF  + F +  ++N+Y K   I  A
Sbjct: 2   DVRDLAYRYLTQLNHVSTTQIIARA--VHAHILTSGFKPNTFILNRLINIYCKSSNITYA 59

Query: 193 YKMFDRMPE---------------------------------RDLVSWNTIVAGFAQNGF 219
            K+FD++P+                                 RD VS+N ++  ++    
Sbjct: 60  RKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGND 119

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVST 278
              AL+L  +M   G   D  T  S+L A++ +    R  + +H   ++ G   I +V+ 
Sbjct: 120 GHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTN 179

Query: 279 ALVDMYAKCGR---------VETARLVFDGMKSRNV------------------------ 305
           AL+  Y  C           + +AR VFD      +                        
Sbjct: 180 ALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAAREL 239

Query: 306 ---------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD- 355
                    V+WN+MI+ YV  G  EEA   F++M   G++    T    + AC    + 
Sbjct: 240 LDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEK 299

Query: 356 ---------------------------------------LERGIFVHKLLDQLKLGTDVS 376
                                                   +R I   ++ D++ +  D+ 
Sbjct: 300 MGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPV-RDII 358

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
             N+++S Y   ++++ A  IFS++  + +++W  MI G AQNG   E L  F +M+S+ 
Sbjct: 359 SWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEG 418

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P  +     I A + L  +   + IH+ VIR   +  +    ALI MY++CG V +A 
Sbjct: 419 LEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAE 478

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
           ++F  M      +WN MI     HG G  A+ELF +M++    P+ ITFL  ++AC+H+G
Sbjct: 479 SVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAG 538

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           L++EG HYF ++   YGI P  DHY  ++DLL RAG   +A   I+ MP E G  ++ A+
Sbjct: 539 LIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEAL 598

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L  C+IH N+ELG +AA+RL EL P + G +++L+N+YAA   WD++A+VR +M ++G++
Sbjct: 599 LAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVK 658

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PGCS VE++N VH F     +HP+ + +YT+L+ L++E+K  GYVPDT  + HD+E  
Sbjct: 659 KEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESE 718

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E+ LS+HSEKLA+ +G++    G+TI + KNLR+CGDCHNA KYIS V  REI+VRD 
Sbjct: 719 HKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDR 778

Query: 796 HRFHCFKNGVCSCGDYW 812
            RFH FKNG CSCG+YW
Sbjct: 779 KRFHHFKNGECSCGNYW 795



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 39/323 (12%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ + + + L  A  + + +   +D  ++ M+ GY +    ++A     RM    + 
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280

Query: 136 PVVYNYTYLLKVCGD----VGEIRRGKEIHGQLI-------------VNGFSL------- 171
              Y YT L+  CG     +G    G+++HG ++             VN   +       
Sbjct: 281 EDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYD 340

Query: 172 ---------------DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
                          D+ +   V++ Y    +IEEA  +F  MPER++++W  +++G AQ
Sbjct: 341 RMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQ 400

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NGF E  L L  +M  EG           + A + +GSL  G+ +H   +R G DS ++ 
Sbjct: 401 NGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSA 460

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             AL+ MY++CG VE+A  VF  M   + VSWN+MIAA  + G+  +A+ +F++M+ + +
Sbjct: 461 GNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDI 520

Query: 337 EPTNVTIMEALHACADLGDLERG 359
            P  +T +  L AC   G ++ G
Sbjct: 521 LPDRITFLTILTACNHAGLIKEG 543



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 2/258 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S +     + +A  +F  +P++    +  M+ G A+    ++ +    +M+ + + P 
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y +   +  C  +G +  G++IH Q+I  G    L A   ++ MY++CG +E A  +F 
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFL 482

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP  D VSWN ++A  AQ+G    A++L  +M +E    D IT ++IL A  + G ++ 
Sbjct: 483 TMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKE 542

Query: 258 GKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAY 315
           G+        R G     +    L+D+  + G    A+ V   M        W +++A  
Sbjct: 543 GRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGC 602

Query: 316 VEGGNPEEAMRIFQKMLD 333
              GN E  ++   ++L+
Sbjct: 603 RIHGNMELGIQAADRLLE 620


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 392/698 (56%), Gaps = 8/698 (1%)

Query: 36  SRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQH--LFQTKLVSLFCKYNSLSD 90
           S +   P   LL  C     LK+ + +   ++KS   + H  +    +   + K + +  
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A R+F+ +  +    +  ++ G A+     D   F   M+   + P  + Y+ +L++C  
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           +  I  G  +H Q+++ GF+   F  T ++NMYAK  +IE++YK+F+ M E ++VSWN +
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + GF  N     A DL  RM  EG   D  T + +  A+  +  +   K V GYA+  G 
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDG--MKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           DS   V TAL+DM +KCG ++ AR +F+   +  R    WN+MI+ Y+  G  E+A+ +F
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-VSMTNSLISMYSK 387
            KM    +   + T     +A A L  L  G  VH    +  L  + VS++N++ + Y+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  ++    +F++++ + L+SW +++  Y+Q    ++A+  F  MR++ I P+ FT  SV
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + + A L ++ Y + +H ++ +   + +  + +AL+DMYAKCG +G A+ +F+ ++    
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +W  +I G+  HG+   A++LF +M++   +PN +TFLC + ACSH GLVEEG+ YF  
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           +KK YG+ P M+HY  +VDLL R G LN+A +FI +MP+EP   V+  +LGAC++H NVE
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LGE AA ++     +    +VLL+N Y  +  +     +R +M+++G++K PGCS + + 
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
             +H FY+G  +HP+  +IY  LE L  ++ +   VPD
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPD 761


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/559 (40%), Positives = 333/559 (59%), Gaps = 1/559 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G+ +H  +++    +  +V T+L+ +YA+CG +  A+ VFD M   + VSW ++I A
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y++ G+  EA+ + +     G+ P + T +  L ACA + DL  G  V +  +Q  +   
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  + + +Y KC ++ +A ++F K++ K  V+W AM+ GYA NG   EAL+ F  M++
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + ++PD + +   + A   L  +   +    +V    F  N  + TALIDMYAKCG+   
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  M ++ +  WN MI G G  G  K A  L  +M +   K ND TF+  + +C+H
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 433

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GL+++G  YF ++ K Y I P ++HYG +VDLL RAG L EA   I  MP+     + G
Sbjct: 434 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 493

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+LG CKIH+N EL E    +L  L+P   G +V+L+NIY+    W+  AK+R  M++KG
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 553

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
           ++K P CS VE + +VH F  G   HP S +IY  L+ L  E+K  GY P T  +  DVE
Sbjct: 554 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 613

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           D  +E+ L  HSEKLAIAF LL + PG TI + KNLRVC DCH A K IS +T REIIVR
Sbjct: 614 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 673

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFHCF++G CSC DYW
Sbjct: 674 DNNRFHCFRDGSCSCNDYW 692



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 1/350 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H + +      +   +T ++ +YA+CG +  A ++FD MP    VSW  ++  
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ +       G R D  T V +L A A V  L  G+ V   A + G    
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V+TA VD+Y KCG +  AR VFD M+ ++ V+W +M+  Y   G+P EA+ +F  M  
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +GV P    +  AL AC  LG L+ G    +++D  +   +  +  +LI MY+KC     
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F +++ K ++ WNAMILG    G    A     +M    +K +  T + ++ +   
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 433

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             +I+   ++ H +         +     ++D+ ++ G +  A  L D M
Sbjct: 434 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM 483



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 164/347 (47%), Gaps = 7/347 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++L+ +   L  A RVF+ +P      +  ++  Y     L +AV        + + 
Sbjct: 157 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 216

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  V ++  G+ +       G +  +F  T  V++Y KCG++ +A ++
Sbjct: 217 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 276

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M ++D V+W  +V G+A NG    ALDL   M  EG R D   +   L A   +G+L
Sbjct: 277 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 336

Query: 256 RIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +G+ A+         D+ V + TAL+DMYAKCG    A +VF  M+ ++++ WN+MI  
Sbjct: 337 DLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 395

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
               G+ + A  +  +M   GV+  + T +  L +C   G ++ G  + H +     +  
Sbjct: 396 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 455

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +     ++ + S+   +  A  +   +     +  NA+ILG    G
Sbjct: 456 RIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGG 498



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 12/282 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T  V L+ K   ++ A  VF+ + DK    +  M+ GYA      +A+ 
Sbjct: 247 QEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALD 306

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
             + M+ + V P  Y     L  C  +G +  G++    +  + F  +    T +++MYA
Sbjct: 307 LFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA 366

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG   EA+ +F +M ++D++ WN ++ G    G  + A  L+ +M + G + +  T + 
Sbjct: 367 KCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIG 426

Query: 245 ILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +L +  + G ++ G+   H           +     +VD+ ++ G ++ A  + D M   
Sbjct: 427 LLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP-- 484

Query: 304 NVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVEPTN 340
             +  N++I   + GG     N E A  +  +++   +EP N
Sbjct: 485 --MPANAVILGALLGGCKIHRNAELAEHVLTQLIR--LEPWN 522


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/696 (36%), Positives = 386/696 (55%), Gaps = 51/696 (7%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           + H  ++  G SL        + +++K        ++F  M  + +V  + ++    +  
Sbjct: 30  QAHAHILKTGISL-----PETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTC 84

Query: 219 FAELALDLVTRMH----EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
            A  AL    +MH      G   D + + S+L        L+  + V     + G    V
Sbjct: 85  AALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPG----V 140

Query: 275 NVSTALVDMYAKCGRVETARLVF----DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
             S+AL+  +A+ GRV+  + +F    D     N+VSWN MI+ +   G+  +A+ +FQ 
Sbjct: 141 VTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQN 200

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK- 389
           M  +G++P   ++   L A  DL     GI +H  + +  LG D  + ++LI MY KC  
Sbjct: 201 MHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCAC 260

Query: 390 ------------------------------KVDRAADIFSKLQGKTL--VSWNAMILGYA 417
                                          VD A ++F + +G  L  VSW +MI   +
Sbjct: 261 ASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCS 320

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           QNG+  EAL  F +M+ + +KP+S T+  ++PA   ++ + + K  H   +R+    +V+
Sbjct: 321 QNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVY 380

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V +ALIDMYAKCG +  +R  FDMM  R++ +WN ++ GY  HG    A+ +F  M    
Sbjct: 381 VGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCG 440

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            KP+ ++F C +SAC+  GL EEG  YF S+ +++G+E  M+HY  MV LLGR+GRL EA
Sbjct: 441 QKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEA 500

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           +  I++MP EP   V+GA+L +C++H  V+LGE AA R+FEL+P   G ++LL+NIYA+ 
Sbjct: 501 YAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASK 560

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
           +MW ++  VR +M  +GL+K PG S +E+KN+VH   +G + HPQ  +I   L  L  E+
Sbjct: 561 AMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEM 620

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           K +GYVP T+ +  DVE+  +E +L  HSEKLA+  GLLN+ PG  + + KNLR+C DCH
Sbjct: 621 KKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCH 680

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              K+IS    REI VRD +RFH FK GVCSCGDYW
Sbjct: 681 AVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 169/346 (48%), Gaps = 41/346 (11%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLDAL-YHT 108
           LK+ R +   + + G+    +  + L+S F +   + +   +F    D   +L+ + ++ 
Sbjct: 125 LKDARNVFDKLPQPGV----VTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNG 180

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ G+ +  S  DAV     M  + + P   + + +L   GD+     G +IH  +I  G
Sbjct: 181 MISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQG 240

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD------------------------- 203
              D F ++ +++MY KC    E   +F+ M E D                         
Sbjct: 241 LGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFK 300

Query: 204 --------LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
                   +VSW +++A  +QNG    AL+L   M  EG + + +TI  +LPA  N+ +L
Sbjct: 301 QFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAAL 360

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             GKA H +++R G  + V V +AL+DMYAKCGR+  +RL FD M +RN+VSWNS++A Y
Sbjct: 361 LHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGY 420

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
              G   EA+ IF+ M   G +P +V+    L AC   G  E G F
Sbjct: 421 AMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWF 466



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD--------------ALYHT 108
           +IK GL       + L+ ++ K    S+ + VF  + D++D               L   
Sbjct: 236 VIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEM-DEVDVGACNALVTGLSRNGLVDN 294

Query: 109 MLKGYAKFASLD--------------------DAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
            L+ + +F  +D                    +A+     M+ + V P       LL  C
Sbjct: 295 ALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC 354

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           G++  +  GK  H   + NG   D++  + +++MYAKCG++  +   FD MP R+LVSWN
Sbjct: 355 GNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++AG+A +G    A+++   M   G++ D ++   +L A    G    G        R 
Sbjct: 415 SLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474

Query: 269 -GFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
            G ++ +   + +V +  + GR+E A  +   M    +   W +++++
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSS 522


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/559 (40%), Positives = 333/559 (59%), Gaps = 1/559 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G+ +H  +++    +  +V T+L+ +YA+CG +  A+ VFD M   + VSW ++I A
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y++ G+  EA+ + +     G+ P + T +  L ACA + DL  G  V +  +Q  +   
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  + + +Y KC ++ +A ++F K++ K  V+W AM+ GYA NG   EAL+ F  M++
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + ++PD + +   + A   L  +   +    +V    F  N  + TALIDMYAKCG+   
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  M ++ +  WN MI G G  G  K A  L  +M +   K ND TF+  + +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GL+++G  YF ++ K Y I P ++HYG +VDLL RAG L EA   I  MP+     + G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 446

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+LG CKIH+N EL E    +L  L+P   G +V+L+NIY+    W+  AK+R  M++KG
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 506

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
           ++K P CS VE + +VH F  G   HP S +IY  L+ L  E+K  GY P T  +  DVE
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           D  +E+ L  HSEKLAIAF LL + PG TI + KNLRVC DCH A K IS +T REIIVR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 626

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFHCF++G CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 1/350 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H + +      +   +T ++ +YA+CG +  A ++FD MP    VSW  ++  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ +       G R D  T V +L A A V  L  G+ V   A + G    
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V+TA VD+Y KCG +  AR VFD M+ ++ V+W +M+  Y   G+P EA+ +F  M  
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +GV P    +  AL AC  LG L+ G    +++D  +   +  +  +LI MY+KC     
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F +++ K ++ WNAMILG    G    A     +M    +K +  T + ++ +   
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             +I+   ++ H +         +     ++D+ ++ G +  A  L D M
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM 436



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 164/347 (47%), Gaps = 7/347 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L++L+ +   L  A RVF+ +P      +  ++  Y     L +AV        + + 
Sbjct: 110 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 169

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  V ++  G+ +       G +  +F  T  V++Y KCG++ +A ++
Sbjct: 170 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 229

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M ++D V+W  +V G+A NG    ALDL   M  EG R D   +   L A   +G+L
Sbjct: 230 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 289

Query: 256 RIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +G+ A+         D+ V + TAL+DMYAKCG    A +VF  M+ ++++ WN+MI  
Sbjct: 290 DLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 348

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
               G+ + A  +  +M   GV+  + T +  L +C   G ++ G  + H +     +  
Sbjct: 349 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +     ++ + S+   +  A  +   +     +  NA+ILG    G
Sbjct: 409 RIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGG 451



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 12/282 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T  V L+ K   ++ A  VF+ + DK    +  M+ GYA      +A+ 
Sbjct: 200 QEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALD 259

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
             + M+ + V P  Y     L  C  +G +  G++    +  + F  +    T +++MYA
Sbjct: 260 LFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA 319

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG   EA+ +F +M ++D++ WN ++ G    G  + A  L+ +M + G + +  T + 
Sbjct: 320 KCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIG 379

Query: 245 ILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +L +  + G ++ G+   H           +     +VD+ ++ G ++ A  + D M   
Sbjct: 380 LLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP-- 437

Query: 304 NVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVEPTN 340
             +  N++I   + GG     N E A  +  +++   +EP N
Sbjct: 438 --MPANAVILGALLGGCKIHRNAELAEHVLTQLIR--LEPWN 475


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/713 (35%), Positives = 394/713 (55%), Gaps = 73/713 (10%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           D  A T +V+ Y   G I  A  +F++ P   RD V +N ++ GF+ N     A++L  +
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 230 MHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           M  EG + D  T  S+L  +A V    +     H  A+++G   I +VS ALV +Y+KC 
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198

Query: 289 R----VETARLVFDGMKSRNVVSW--------------------------------NSMI 312
                + +AR VFD +  ++  SW                                N+MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + YV  G  +EA+ + ++M+  G+E    T    + ACA  G L+ G  VH  + + +  
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-RED 317

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                 NSL+S+Y KC K D A  IF K+  K LVSWNA++ GY  +G + EA   F +M
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377

Query: 433 RSKNI-------------------------------KPDSFTMVSVIPALAELSVIRYAK 461
           + KNI                               +P  +     I + A L      +
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
             HA +++  F+ ++    ALI MYAKCG V  AR +F  M      +WN +I   G HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            G  AV+++ +ML+   +P+ IT L  ++ACSH+GLV++G  YF S++  Y I P  DHY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             ++DLL R+G+ ++A   I+ +P +P   ++ A+L  C++H N+ELG  AA++LF L P
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  G ++LL+N++AA   W+++A+VR +M  +G++K   CS +E++ +VH+F    T HP
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE-DYVQENLLSSHSEKLAIAFGLLNSSP 759
           +++ +Y +L+ L  E++  GYVPDT+ + HDVE D  +E++L++HSEK+A+AFGL+   P
Sbjct: 678 EAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPP 737

Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           G+TI I KNLR CGDCHN  +++S V  R+II+RD  RFH F+NG CSCG++W
Sbjct: 738 GTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 258/573 (45%), Gaps = 75/573 (13%)

Query: 75  QTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +T +VS +C    ++ A  VFE  P+  +   +Y+ M+ G++       A++   +M+++
Sbjct: 83  RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142

Query: 133 DVAPVVYNYTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--- 188
              P  + +  +L     V +  ++  + H   + +G          +V++Y+KC     
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202

Query: 189 -IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL------------------------- 222
            +  A K+FD + E+D  SW T++ G+ +NG+ +L                         
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262

Query: 223 -------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                  AL++V RM   G   D  T  S++ A A  G L++GK VH Y +R   D   +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV------------------- 316
              +LV +Y KCG+ + AR +F+ M ++++VSWN++++ YV                   
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 317 ------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
                       E G  EE +++F  M  +G EP +     A+ +CA LG    G   H 
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            L ++   + +S  N+LI+MY+KC  V+ A  +F  +     VSWNA+I    Q+G   E
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALI 483
           A++ + +M  K I+PD  T+++V+ A +   ++    K+  ++               LI
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561

Query: 484 DMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           D+  + G    A ++ + +  +     W  ++ G   HG  +  +   +K+  G    +D
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF-GLIPEHD 620

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            T++   +  + +G  EE +     L +D G++
Sbjct: 621 GTYMLLSNMHAATGQWEE-VARVRKLMRDRGVK 652



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 173/394 (43%), Gaps = 78/394 (19%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS----------- 302
           SL++ +AVHG  +  GF    ++   L+D+Y K   +  AR +FD +             
Sbjct: 29  SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88

Query: 303 ----------------------RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
                                 R+ V +N+MI  +    +   A+ +F KM  +G +P N
Sbjct: 89  GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148

Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK----VDRAA 395
            T    L   A + D E+  +  H    +   G   S++N+L+S+YSKC      +  A 
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208

Query: 396 DIFSKLQGK--------------------------------TLVSWNAMILGYAQNGRVN 423
            +F ++  K                                 LV++NAMI GY   G   
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM-TAL 482
           EAL    +M S  I+ D FT  SVI A A   +++  K +HA V+R   E   F    +L
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSL 326

Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           + +Y KCG    ARA+F+ M  + + +WN ++ GY + G    A  +F +M E     N 
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE----KNI 382

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           ++++  IS  + +G  EEG+  F+ +K++ G EP
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 56/291 (19%)

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK--LQGKTLVSWNAMILGYAQ 418
           +  +L D++     ++ T +++S Y     +  A  +F K  +  +  V +NAMI G++ 
Sbjct: 67  YARQLFDEISEPDKIART-TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA-----ELSVIRYAKWIHALVIRSCFE 473
           N     A+N FCKM+ +  KPD+FT  SV+  LA     E   +++    HA  ++S   
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAG 181

Query: 474 KNVFVMTALIDMYAKCGA----VGTARALFDMMNERHVTTW------------------- 510
               V  AL+ +Y+KC +    + +AR +FD + E+   +W                   
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241

Query: 511 -------------NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
                        N MI GY   G  + A+E+  +M+    + ++ T+   I AC+ +GL
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301

Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHY-GAMVDLLGRAGRLNEAWDFIQKMP 605
           ++ G  +H +   ++D+       H+  ++V L  + G+ +EA    +KMP
Sbjct: 302 LQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMP 347


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/562 (42%), Positives = 352/562 (62%), Gaps = 7/562 (1%)

Query: 258 GKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           G+ +H  A+R+G F S    ++AL+ MY  C R   AR  FD + + N V   +M +  +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTD 374
                   + IF+ M+  G           +   A     +RGI   +H L+ ++ L   
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 375 VSMTNSLISMYSKCKKVD-RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
             + N++I  Y+K    D  AA     +  + +VSWN MI  YAQNG   EAL  + KM 
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKML 286

Query: 434 --SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
               +++ ++ T+ +V+ A A    I+  K IH  V+R   E NV+V T+++DMY+KCG 
Sbjct: 287 IVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGK 346

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           V  A   F  +  +++ +W+ MI GYG HG G+ A+ +F  M +   KPN ITF+  ++A
Sbjct: 347 VEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAA 406

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           CSH+GL+ EG +++ ++K ++GIEP ++HYG MVDLLGRAG L+EA+  I++M ++P   
Sbjct: 407 CSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAA 466

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           ++GA+L AC+I+KNVEL +  A RLFELD    GY+VLL+NIYA A MW ++ ++R +++
Sbjct: 467 LWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVK 526

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
            +G++K PG S VELK + H FY G   HPQ K IY +LE L++ I  AGYVP+T S+ H
Sbjct: 527 TRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLH 586

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           D++   +E++L  HSEKLA+AF L+NS  GS IH+ KNLRVC DCH A K I+ +TGREI
Sbjct: 587 DLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREI 646

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           I+RD+ RFH FK+G+CSCGDYW
Sbjct: 647 IIRDLKRFHHFKDGLCSCGDYW 668



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 180/367 (49%), Gaps = 10/367 (2%)

Query: 157 GKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           G+++H   + +G F  D +  + +++MY  C +  +A + FD +P  + V    + +G  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 216 QNGFAELALDLVTRMHEEGRRG--DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +N      L +   M   G  G  D    +  L A A V    I   +H    + G D  
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 274 VNVSTALVDMYAKCG--RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
             V+  ++D YAK G   +  AR +FD M  R+VVSWN+MIA Y + G   EA+ ++ KM
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 332 LDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           L  G  V    VT+   L ACA  G ++ G  +H  + ++ L  +V +  S++ MYSKC 
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           KV+ A   F K++GK ++SW+AMI GY  +G   EAL+ F  MR   +KP+  T ++V+ 
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 450 ALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HV 507
           A +   ++   + W + +      E  V     ++D+  + G +  A  L   M  +   
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 508 TTWNVMI 514
             W  ++
Sbjct: 466 ALWGALL 472



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 59  ILPLIIKSGLCDQHLFQTKLVSLFCKY--NSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           I  L+ K GL  Q      ++  + K   + L  A ++F+ + D+    ++TM+  YA+ 
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQN 272

Query: 117 ASLDDAVSFLIRMRY--DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
               +A+    +M     DV       + +L  C   G I+ GK IH Q++  G   +++
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
             T VV+MY+KCG++E A+K F ++  ++++SW+ ++AG+  +G+ + AL + T M + G
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHG-YAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
            + ++IT +++L A ++ G L  G+  +       G +  V     +VD+  + G ++ A
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEA 452

Query: 294 RLVFDGMKSR-NVVSWNSMIAA 314
             +   MK + +   W ++++A
Sbjct: 453 YGLIKEMKVKPDAALWGALLSA 474


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 350/594 (58%), Gaps = 36/594 (6%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L++G  VH + +  G      V + +V  YA  G ++++  VF+G+   + + +NSMI A
Sbjct: 86  LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRA 145

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  E  +  +  M   G      T    L +  +L  +  G  VH L+ ++ L  D
Sbjct: 146 YARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD 205

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + +  SLI +Y KC +++ A  +F  +  + + SWNA++ GY ++G ++ AL  F +M  
Sbjct: 206 LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPW 265

Query: 435 KNI---------------------------------KPDSFTMVSVIPALAELSVIRYAK 461
           +NI                                 +P+  T++SV+PA A+LS +   +
Sbjct: 266 RNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGR 325

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN--ERHVTTWNVMIDGYGT 519
            IH L  R     N  V+ AL  MYAKCG++  AR  FD +N  E+++  WN MI  Y +
Sbjct: 326 QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 385

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           +G G  AV  F +M++   +P+DITF   +S CSHSGLV+ G+ YF  +   Y I P ++
Sbjct: 386 YGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVE 445

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  + DLLGRAGRL EA   + +MP+  G +++G++L AC+ H+N+E+ E AA +LF L
Sbjct: 446 HYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVL 505

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +P+  G +VLL+N+YA A  W ++ K+R I++ +G +K+PGCS +E+  + H F  G T 
Sbjct: 506 EPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTS 565

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQ K IY FLE L +++KAAGY PDT+ + HD+ +  +E  L +HSEKLA+AFG+LN+ 
Sbjct: 566 HPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTP 625

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             + + + KNLR+CGDCH A  +IS + GRE+IVRD++RFH FK G CSCGDYW
Sbjct: 626 AETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 190/403 (47%), Gaps = 36/403 (8%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P + +Y  + +    +  ++ G ++H  +++ G        + +V  YA  G I+ +  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ + E   + +N+++  +A+ GFAE  +     MH  G  GD+ T   +L +   + S+
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +GK VHG  +R G    + V+T+L+ +Y KCG +  A  VFD M  R+V SWN+++A Y
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247

Query: 316 VEGGNPEEAMRIFQKML---------------------------------DQGVEPTNVT 342
            + G  + A+ IF++M                                  D GV P  VT
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL- 401
           IM  L ACA L  LERG  +H+L  ++ L ++ S+  +L +MY+KC  +  A + F KL 
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367

Query: 402 -QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
              K L++WN MI  YA  G   +A++ F +M    I+PD  T   ++   +   ++   
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427

Query: 461 -KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
            K+ + +         V     + D+  + G +  A  L   M
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM 470



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 193/390 (49%), Gaps = 39/390 (10%)

Query: 6   QCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIK 65
           +C +S  T S   Q L +    LS     P   Y  P    L     LK   ++   ++ 
Sbjct: 43  KCSISPLTISATLQNLLQ---PLSAPGPPPILSYA-PVFQFLTGLNMLKLGHQVHAHMLL 98

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
            GL    L  +K+V+ +     +  +  VF  I +    L+++M++ YA++   +  V+ 
Sbjct: 99  RGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVAT 158

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M         + + ++LK   ++  +  GK +HG ++  G   DL+  T ++ +Y K
Sbjct: 159 YFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGK 218

Query: 186 CGQIEEAYKMFD-------------------------------RMPERDLVSWNTIVAGF 214
           CG+I +A K+FD                               RMP R++VSW T+++G+
Sbjct: 219 CGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGY 278

Query: 215 AQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           +Q+G A+ AL L   M +E  G R +++TI+S+LPA A + +L  G+ +H  A R G +S
Sbjct: 279 SQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS 338

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
             +V  AL  MYAKCG +  AR  FD +    +N+++WN+MI AY   G+  +A+  F++
Sbjct: 339 NASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFRE 398

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGI 360
           M+  G++P ++T    L  C+  G ++ G+
Sbjct: 399 MIQAGIQPDDITFTGLLSGCSHSGLVDVGL 428



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 8/270 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
           L++ + K   +  A  +FE +P +    + TM+ GY++      A+S    M  +D  V 
Sbjct: 243 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVR 302

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       +L  C  +  + RG++IH      G + +   +  +  MYAKCG + +A   
Sbjct: 303 PNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNC 362

Query: 196 FDRM--PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           FD++   E++L++WNT++  +A  G    A+     M + G + D IT   +L   ++ G
Sbjct: 363 FDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG 422

Query: 254 SLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSM 311
            + +G K  +  +     +  V     + D+  + GR+ E ++LV +         W S+
Sbjct: 423 LVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSL 482

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           +AA  +  N E A    +K+    +EP N 
Sbjct: 483 LAACRKHRNLEMAETAARKLFV--LEPENT 510


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/663 (39%), Positives = 376/663 (56%), Gaps = 5/663 (0%)

Query: 155 RRGKEIHGQ-LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           R G+  H + L +   +L  F    +VN+Y+K      A       P   +VS+   ++G
Sbjct: 34  RLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISG 93

Query: 214 FAQNGFAELALDLVTRMHEEG-RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-D 271
            AQ+     AL     M   G R  DF    +   A +       G  +H  A+R G+  
Sbjct: 94  AAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLP 153

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
               VS A +DMY K G +  AR +FD M +RNVV+WN+++   V  G P E +  +  +
Sbjct: 154 DDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGL 213

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
              G  P  V++    +ACA + +L  G   +  + +   G DVS++NS++  Y KC+ V
Sbjct: 214 RGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCV 273

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
            +A  +F  +  +  VSW +M++ YAQNG   EA   +   R    +P  F + SV+   
Sbjct: 274 GKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTC 333

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L  +   + +HA+ +RSC + N+FV +AL+DMY KCG +  A  +F  M +R++ TWN
Sbjct: 334 AGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWN 393

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEG-PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
            MI GY   G    A+ +F+KM+ G  T PN IT +  ++ACS  GL +EG   F ++K 
Sbjct: 394 AMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKW 453

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
            +GIEP ++HY  +VDLL RAG    A+  IQ MP+ P I+V+GA+LG CK+H   ELG 
Sbjct: 454 RFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGR 513

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA +LFELDP + G HVLL+N+ A+A  W +   VR  M+  G++K PG S +  KN V
Sbjct: 514 IAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVV 573

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLA 749
           H F +  T H  ++ I   L  L  +++AAGY+PDT  +++D+E+  +E+ +  HSEKLA
Sbjct: 574 HVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLA 633

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCG 809
           +AFGL+   PG  I I KNLR+C DCH A K+IS + GREIIVRD + FH FKN  CSC 
Sbjct: 634 LAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCK 693

Query: 810 DYW 812
           DYW
Sbjct: 694 DYW 696



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 171/358 (47%), Gaps = 5/358 (1%)

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
           L D        + ++ K   L+ A R+F+ +P++    ++ ++          + V    
Sbjct: 152 LPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYF 211

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
            +R     P V +       C  +  +  G++ +G +   GF  D+     VV+ Y KC 
Sbjct: 212 GLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCR 271

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            + +A  +FD M  R+ VSW ++V  +AQNG  E A  +       G       + S+L 
Sbjct: 272 CVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLT 331

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
             A +  L +G+A+H  A+R+  DS + V++ALVDMY KCG +E A  VF  M  RN+V+
Sbjct: 332 TCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVT 391

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           WN+MI  Y   G+   A+ +F KM + Q   P  +T++  L AC+  G  + G  + + +
Sbjct: 392 WNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTM 451

Query: 367 DQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGR 421
            + + G +  + +   ++ +  +    +RA  I   +  +  +S W A++ G   +G+
Sbjct: 452 -KWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 3/286 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           T+L    +    + K G          +V  + K   +  A  VF+ +  + +  + +M+
Sbjct: 236 TNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMV 295

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             YA+  + ++A    +  R     P  +  + +L  C  +  +  G+ +H   + +   
Sbjct: 296 VAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCID 355

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            ++F  + +V+MY KCG IE+A ++F  MP+R+LV+WN ++ G+A  G A  AL +  +M
Sbjct: 356 SNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKM 415

Query: 231 -HEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
              +    ++IT+V++L A +  G  + G +       R G +  +     +VD+  + G
Sbjct: 416 IMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAG 475

Query: 289 RVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD 333
             E A  +  GM  R  +S W +++      G  E      +K+ +
Sbjct: 476 MEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFE 521


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/657 (36%), Positives = 368/657 (56%), Gaps = 33/657 (5%)

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           ++ A  +F  +P       N ++  F++    E  L L   +   G   D  +   +L A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 249 VANVGSLRIGKAVHGYAMRAGF-DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           V+ + +L +G  +HG A + GF  +   + +AL+ MYA CGR+  AR +FD M  R+VV+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN MI  Y +  + +  ++++++M   G EP  + +   L ACA  G+L  G  +H+ + 
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAAD------------------------------- 396
                    +  SL++MY+ C  +  A +                               
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           IF ++  K LV W+AMI GYA++ +  EAL  F +M+ + I PD  TM+SVI A A +  
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           +  AKWIH    ++ F + + +  ALIDMYAKCG +  AR +F+ M  ++V +W+ MI+ 
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 424

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           +  HG   +A+ LF++M E   +PN +TF+  + ACSH+GLVEEG  +F+S+  ++ I P
Sbjct: 425 FAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISP 484

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
             +HYG MVDL  RA  L +A + I+ MP  P + ++G+++ AC+ H  +ELGE AA RL
Sbjct: 485 QREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRL 544

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EL+PD  G  V+L+NIYA    WD +  VR +M+ KG+ K   CS +E+ NEVH F   
Sbjct: 545 LELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMA 604

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLL 755
              H QS  IY  L+ ++ ++K  GY P T+ I  D+E+  ++ ++  HSEKLA+ +GL+
Sbjct: 605 DRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLI 664

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
                S I I KNLR+C DCH+  K +S V   EI++RD  RFH F  G+CSC DYW
Sbjct: 665 GERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 170/624 (27%), Positives = 300/624 (48%), Gaps = 90/624 (14%)

Query: 34  IPSRIYRHPSAL-LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           + +R+   PS   LL  C +L+ +++I   I++S + + +L   KLV   C   S S +A
Sbjct: 5   MSTRLIPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSA 64

Query: 93  -----RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
                 +F  IP+      + +L+ +++  + ++ +S  + +R +      +++  LLK 
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 148 CGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
              +  +  G EIHG     GF   D F  + ++ MYA CG+I +A  +FD+M  RD+V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN ++ G++QN   +  L L   M   G   D I + ++L A A+ G+L  GKA+H +  
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244

Query: 267 RAGFDSIVNVSTALVDMYAKCGR-------------------------------VETARL 295
             GF    ++ T+LV+MYA CG                                V+ AR 
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           +FD M  +++V W++MI+ Y E   P EA+++F +M  + + P  +T++  + ACA++G 
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L +  ++H   D+   G  + + N+LI MY+KC  + +A ++F  +  K ++SW++MI  
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 424

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +A +G  + A+  F +M+ +NI+P+  T + V+ A +           HA          
Sbjct: 425 FAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACS-----------HA---------- 463

Query: 476 VFVMTALIDMYAKCGAVGTARALF-DMMNERHVTT----WNVMIDGYGTHGLGKAAVELF 530
                         G V   +  F  M+NE  ++     +  M+D Y      + A+EL 
Sbjct: 464 --------------GLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELI 509

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
             M   P  PN I +   +SAC + G +E G    T L +   +EP  DH GA+V +L  
Sbjct: 510 ETM---PFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE---LEP--DHDGALV-VLSN 560

Query: 591 AGRLNEAWD---FIQKMPIEPGIT 611
                + WD    ++K+    G++
Sbjct: 561 IYAKEKRWDDVGLVRKLMKHKGVS 584


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/569 (40%), Positives = 354/569 (62%), Gaps = 6/569 (1%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNV 305
           ++   S R    +  YA+++  +  V+ +T L++   +      +  AR +FD M   ++
Sbjct: 38  ISKCNSERELMQIQAYAIKSHQED-VSFNTKLINFCTESPTESSMSYARHLFDAMSEPDI 96

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V +NS+   Y    NP E   +F ++L+  + P N T    L ACA    LE G  +H L
Sbjct: 97  VIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCL 156

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +L +  +V +  +LI+MY++C+ VD A  +F ++    +V +NAMI GYA+  R NEA
Sbjct: 157 SMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 216

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L+ F +M+ KN+KP+  T++SV+ + A L  +   KWIH    +  F K V V TALIDM
Sbjct: 217 LSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDM 276

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           +AKCG++  A ++F+ M  +    W+ MI  Y  HG  + ++ +F +M     +P++ITF
Sbjct: 277 FAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITF 336

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  ++ACSH+GLVEEG  YF+ +  ++GI P + HYG+MVDLLGRAG L +A++FI K+P
Sbjct: 337 LGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLP 396

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I P   ++  +L AC  H N+EL EK + R+ ELD   GG +V+L+N+YA    W+ +  
Sbjct: 397 ISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDS 456

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R +M+ +   K PGCS +E+ N VH F+SG      + +++  L+ ++ E+K AGYVPD
Sbjct: 457 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPD 516

Query: 726 TNSI--HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           T+ +   D+ D  +E  L  HSEKLAIAFGLLN+ PG+TI + KNLRVC DCH+A K IS
Sbjct: 517 TSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLIS 576

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+ GR++++RD+ RFH F++G CSC D+W
Sbjct: 577 LIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 203/375 (54%), Gaps = 8/375 (2%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN----SLSDAARVFEPIPD 100
           LL+  C S +EL +I    IKS   D   F TKL++ FC  +    S+S A  +F+ + +
Sbjct: 36  LLISKCNSERELMQIQAYAIKSHQEDVS-FNTKLIN-FCTESPTESSMSYARHLFDAMSE 93

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               +++++ +GY++  +  +  +  + +  DD+ P  Y +  LLK C     +  G+++
Sbjct: 94  PDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQL 153

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   +++    ++NMY +C  ++ A  +FDR+ E  +V +N ++ G+A+    
Sbjct: 154 HCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRP 213

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL L   M  +  + + IT++S+L + A +GSL +GK +H YA + GF   V V+TAL
Sbjct: 214 NEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTAL 273

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DM+AKCG ++ A  +F+ M+ ++  +W++MI AY   G  E +M +F++M  + V+P  
Sbjct: 274 IDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDE 333

Query: 341 VTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +T +  L+AC+  G +E G  +   ++ +  +   +    S++ +  +   ++ A +   
Sbjct: 334 ITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFID 393

Query: 400 KLQ-GKTLVSWNAMI 413
           KL    T + W  ++
Sbjct: 394 KLPISPTPMLWRILL 408



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 204/423 (48%), Gaps = 17/423 (4%)

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A +F   ++ D V P   N   L+  C    E+ + +       +     D+   T ++N
Sbjct: 15  AETFTKPLKIDTVNPNPPNPILLISKCNSERELMQIQ----AYAIKSHQEDVSFNTKLIN 70

Query: 182 MYAKC---GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
              +      +  A  +FD M E D+V +N+I  G++++       +L   + E+    D
Sbjct: 71  FCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPD 130

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T  S+L A A   +L  G+ +H  +M+ G D  V V   L++MY +C  V+ AR VFD
Sbjct: 131 NYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFD 190

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +    VV +N+MI  Y     P EA+ +F++M  + ++P  +T++  L +CA LG L+ 
Sbjct: 191 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDL 250

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G ++H+   +      V +  +LI M++KC  +D A  IF  ++ K   +W+AMI+ YA 
Sbjct: 251 GKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYAN 310

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI----RYAKW-IHALVIRSCFE 473
           +G+   ++  F +MRS+N++PD  T + ++ A +   ++     Y  W +H   I    +
Sbjct: 311 HGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIK 370

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNK 532
                  +++D+  + G +  A    D +        W +++    +H   + A ++  +
Sbjct: 371 H----YGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSER 426

Query: 533 MLE 535
           +LE
Sbjct: 427 ILE 429


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/579 (41%), Positives = 351/579 (60%), Gaps = 7/579 (1%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T   ++ + A   SL  G  VH   + +GFD    ++T L++MY + G ++ A  VFD  
Sbjct: 80  TFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDET 139

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA----DLGDL 356
           + R +  WN++  A    G+ +E + ++ +M   G      T    L AC      +  L
Sbjct: 140 RERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPL 199

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
            +G  +H  + +     ++ +  +L+ +Y+K   V  A  +F  +  K  VSW+AMI  +
Sbjct: 200 RKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 417 AQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           A+N    +AL  F  M   + N  P+S TMV+++ A A L+ +   K IH  ++R   + 
Sbjct: 260 AKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDS 319

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
            + V+ ALI MY +CG V   + +FD M +R V +WN +I  YG HG GK A+++F  M+
Sbjct: 320 ILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMI 379

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
                P+ I+F+  + ACSH+GLVEEG   F S+   Y I P M+HY  MVDLLGRA RL
Sbjct: 380 HQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 439

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
            EA   I+ M  EPG TV+G++LG+C+IH NVEL E+A+  LFEL+P   G +VLLA+IY
Sbjct: 440 GEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIY 499

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
           A A +W +   V  ++E +GLQK PGCS +E+K +V+SF S    +PQ + I+  L  L 
Sbjct: 500 AEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLS 559

Query: 715 DEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
           +E+KA GYVP TN + +D+++  +E ++  HSEKLA+AFGL+N++ G TI IRKNLR+C 
Sbjct: 560 NEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCE 619

Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           DCH  TK+IS    REI+VRD++RFH F++GVCSCGDYW
Sbjct: 620 DCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 231/471 (49%), Gaps = 18/471 (3%)

Query: 60  LPLIIKSGLCDQHLFQTKLVS--LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           +P  ++      HL  T  VS  +   + SL+ +A +   I    + L  ++ KG     
Sbjct: 6   IPQFVRHVPSQSHLCYTSHVSSRVPVSFVSLNPSANLINDINSNNNQLIQSLCKG----G 61

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           +L  A+  L      +  P    + +L+  C     +  G ++H  L+ +GF  D F  T
Sbjct: 62  NLKQALHLLC----CEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLAT 117

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            ++NMY + G I+ A K+FD   ER +  WN +    A  G  +  LDL  +M+  G   
Sbjct: 118 KLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPS 177

Query: 238 DFITIVSILPAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           D  T   +L A      +V  LR GK +H + +R G+++ ++V T L+D+YAK G V  A
Sbjct: 178 DRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYA 237

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACA 351
             VF  M ++N VSW++MIA + +   P +A+ +FQ M+ +     P +VT++  L ACA
Sbjct: 238 NSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACA 297

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            L  LE+G  +H  + + +L + + + N+LI+MY +C +V     +F  ++ + +VSWN+
Sbjct: 298 GLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNS 357

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRS 470
           +I  Y  +G   +A+  F  M  + + P   + ++V+ A +   ++   K +  +++ + 
Sbjct: 358 LISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKY 417

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTH 520
                +     ++D+  +   +G A  L  DM  E   T W  ++     H
Sbjct: 418 RIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIH 468



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 140/302 (46%), Gaps = 15/302 (4%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L VC  L++ + I   I++ G        T L+ ++ K+ S+S A  VF  +P K    +
Sbjct: 194 LSVC-PLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
             M+  +AK      A+     M ++  +  P       +L+ C  +  + +GK IHG +
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYI 312

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +       L  +  ++ MY +CG++    ++FD M +RD+VSWN++++ +  +GF + A+
Sbjct: 313 LRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAI 372

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK-----AVHGYAMRAGFDSIVNVSTA 279
            +   M  +G    +I+ +++L A ++ G +  GK      +  Y +  G +        
Sbjct: 373 QIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHY----AC 428

Query: 280 LVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +VD+  +  R+ E  +L+ D         W S++ +     N E A R    + +  +EP
Sbjct: 429 MVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFE--LEP 486

Query: 339 TN 340
            N
Sbjct: 487 RN 488



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 11/215 (5%)

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N +I    + G + +AL+  C        P   T   +I + A+ + + Y   +H  ++ 
Sbjct: 51  NQLIQSLCKGGNLKQALHLLCC----EPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVD 106

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
           S F+++ F+ T LI+MY + G++  A  +FD   ER +  WN +       G GK  ++L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDL 166

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGL----VEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           + +M    T  +  T+   + AC  S L    + +G      + + +G E  +     ++
Sbjct: 167 YIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILR-HGYEANIHVMTTLL 225

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           D+  + G ++ A      MP +  ++ + AM+ AC
Sbjct: 226 DVYAKFGSVSYANSVFCAMPTKNFVS-WSAMI-AC 258


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/728 (32%), Positives = 401/728 (55%), Gaps = 8/728 (1%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPS-----ALLLEVCTSLKEL---RRILPLIIK 65
           NS  +  LH   +  S   ++  R  + P      A++L+ C+ +++     ++  L I+
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQ 166

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
            G  +  +  + LV ++ K   L DA RVF  +P++    +  ++ GY +     + +  
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M    +      Y  + + C  +   + G ++HG  + + F+ D    T  ++MYAK
Sbjct: 227 FKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAK 286

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           C ++ +A+K+F+ +P     S+N I+ G+A+      ALD+   +       D I++   
Sbjct: 287 CERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGA 346

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A + +     G  +HG A++ G    + V+  ++DMY KCG +  A L+F+ M+ R+ 
Sbjct: 347 LTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDA 406

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN++IAA+ +     + + +F  ML   +EP + T    + ACA    L  G  +H  
Sbjct: 407 VSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGR 466

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           + +  +G D  + ++L+ MY KC  +  A  I ++L+ KT VSWN++I G++   +   A
Sbjct: 467 IIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
             YF +M    I PD++T  +V+   A ++ I   K IHA +++     +V++ + L+DM
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM 586

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y+KCG +  +R +F+   +R   TW+ MI  Y  HGLG+ A+ LF +M     KPN   F
Sbjct: 587 YSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIF 646

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  + AC+H G V++G+HYF  +   YG++P M+HY  MVDLLGR+G++NEA   I+ MP
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMP 706

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
            E    ++  +L  CK+  NVE+ EKA N L +LDP +   +VLLAN+YA   MW ++AK
Sbjct: 707 FEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAK 766

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R+IM+   L+K PGCS +E+++EVH+F  G   HP+S+ IY     L+DE+K AGYVPD
Sbjct: 767 MRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPD 826

Query: 726 TNSIHDVE 733
            + + D E
Sbjct: 827 IDFMLDEE 834



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 315/631 (49%), Gaps = 48/631 (7%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C++LK L   +++   +I +G          L+  +CK + ++ A +VF+ +P + 
Sbjct: 12  ILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRD 71

Query: 103 DALYHTMLKGYAKFASLD------------DAVSF-------------------LIRMRY 131
              ++T++ GYA   ++             D VS+                    +RMR 
Sbjct: 72  VISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             +      +  +LK C  + +   G ++H   I  GF  D+   + +V+MY+KC ++++
Sbjct: 132 LKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDD 191

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A+++F  MPER+LV W+ ++AG+ QN      L L   M + G      T  S+  + A 
Sbjct: 192 AFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251

Query: 252 VGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + + ++G  +HG+A+++ F  DSI+   TA +DMYAKC R+  A  VF+ + +    S+N
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSII--GTATLDMYAKCERMFDAWKVFNTLPNPPRQSYN 309

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           ++I  Y       +A+ IFQ +    +    +++  AL AC+ +     GI +H L  + 
Sbjct: 310 AIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC 369

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            LG ++ + N+++ MY KC  +  A  IF +++ +  VSWNA+I  + QN  + + L+ F
Sbjct: 370 GLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
             M    ++PD FT  SV+ A A    + Y   IH  +I+S    + FV +AL+DMY KC
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKC 489

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A  +   + E+   +WN +I G+ +    + A   F++MLE    P++ T+   +
Sbjct: 490 GMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVL 549

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA--MVDLLGRAGRLNEAWDFIQKMPIE 607
             C++   +E G      + K   ++   D Y A  +VD+  + G + ++    +K P  
Sbjct: 550 DVCANMATIELGKQIHAQILK---LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKR 606

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFE 638
             +T + AM+ A   H    LGEKA N LFE
Sbjct: 607 DYVT-WSAMICAYAYHG---LGEKAIN-LFE 632



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 289/613 (47%), Gaps = 91/613 (14%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           ++++L+ C ++  +  GK++H Q+IV GF   ++    ++  Y K  ++  A+K+FDRMP
Sbjct: 9   FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68

Query: 201 ERDLVSWNTIVAGFA-------------------------------QNGFAELALDLVTR 229
           +RD++SWNT++ G+A                                NG    ++++  R
Sbjct: 69  QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M       D+ T   IL A + +    +G  VH  A++ GF++ V   +ALVDMY+KC +
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ A  VF  M  RN+V W+++IA YV+     E +++F+ ML  G+  +  T      +
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA L   + G  +H    +     D  +  + + MY+KC+++  A  +F+ L      S+
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY---AKWIHAL 466
           NA+I+GYA+  +  +AL+ F  ++  N+    F  +S+  AL   SVI+       +H L
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNNL---GFDEISLSGALTACSVIKRHLEGIQLHGL 365

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
            ++     N+ V   ++DMY KCGA+  A  +F+ M  R   +WN +I  +  +      
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS-----LKKDYGIEPVMDHY 581
           + LF  ML    +P+D T+   + AC+     ++ ++Y T      +K   G++  +   
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAG----QQALNYGTEIHGRIIKSGMGLDWFVG-- 479

Query: 582 GAMVDLLGRAGRLNEA--------------WDFI------QK--------------MPIE 607
            A+VD+ G+ G L EA              W+ I      QK              M I 
Sbjct: 480 SALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGII 539

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P    +  +L  C     +ELG++   ++ +L         L +++Y A+++ D  +K  
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQ--------LHSDVYIASTLVDMYSKCG 591

Query: 668 TIMEKKGL-QKTP 679
            + + + + +K P
Sbjct: 592 NMQDSRLMFEKAP 604



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 237/563 (42%), Gaps = 87/563 (15%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T   IL   +N+ +L  GK VH   +  GF   + V+  L+  Y K  ++  A  VFD 
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH----------- 348
           M  R+V+SWN++I  Y   GN   A  +F  M ++ V   N  +   LH           
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 349 --------------------ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
                               AC+ + D   G+ VH L  Q+    DV   ++L+ MYSKC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           KK+D A  +F ++  + LV W+A+I GY QN R  E L  F  M    +     T  SV 
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            + A LS  +    +H   ++S F  +  + TA +DMYAKC  +  A  +F+ +      
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTS 567
           ++N +I GY     G  A+++F  +       ++I+   A++ACS      EGI  +  +
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLA 366

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEA--------------WDFI------------ 601
           +K   G    + +   ++D+ G+ G L EA              W+ I            
Sbjct: 367 VKCGLGFNICVAN--TILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 602 --------QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
                    +  +EP    +G+++ AC   + +  G +   R+ +          +  + 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSG--------MGLDW 476

Query: 654 YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV--HSFYSGSTKHPQSKRIYTFLE 711
           +  +++ D   K   +ME + +      + +E K  V  +S  SG +   QS+    +  
Sbjct: 477 FVGSALVDMYGKCGMLMEAEKIH-----ARLEEKTTVSWNSIISGFSSQKQSENAQRYFS 531

Query: 712 TLIDEIKAAGYVPDTNSIHDVED 734
            +++     G +PD  +   V D
Sbjct: 532 QMLE----MGIIPDNYTYATVLD 550


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/573 (40%), Positives = 353/573 (61%), Gaps = 6/573 (1%)

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF-DSI 273
           +  G    ALDL+ R        D+     +L     +G +  G+ VH + + + F D+ 
Sbjct: 66  SDGGTGLYALDLIQR---GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + +   +V+MYAKCG ++ AR +FD M ++++V+W ++IA + +   P +A+ +F +ML 
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G++P + T+   L A      L+ G  +H    +    + V + ++L+ MY++C  +D 
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A   F  +  K+ VSWNA+I G+A+ G    AL+   KM+ KN +P  FT  SV  A A 
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           +  +   KW+HA +I+S  +   F+   L+DMYAK G++  A+ +FD + +  V +WN M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           + G   HGLGK  ++ F +ML    +PN+I+FLC ++ACSHSGL++EG++YF  +KK Y 
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YK 421

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           +EP + HY   VDLLGR G L+ A  FI++MPIEP   V+GA+LGAC++HKN+ELG  AA
Sbjct: 422 VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAA 481

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
            R FELDP + G  +LL+NIYA+A  W  +AKVR +M++ G++K P CS VE++N VH F
Sbjct: 482 ERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLF 541

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAF 752
            +    HPQ K I    E +  +IK  GYVPDT+ +   V+   +E  L  HSEKLA+AF
Sbjct: 542 VANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAF 601

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLV 785
            LLN+  GS I I+KN+RVCGDCH A K++S +
Sbjct: 602 ALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 213/386 (55%), Gaps = 5/386 (1%)

Query: 139 YN-YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKM 195
           YN Y+ LLK C  +G++ +G+ +H  L+ + F LD  L     +VNMYAKCG +++A +M
Sbjct: 87  YNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD MP +D+V+W  ++AGF+QN     AL L  +M   G + +  T+ S+L A  +   L
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL 205

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G  +H + ++ G+ S V V +ALVDMYA+CG ++ A+L FDGM +++ VSWN++I+ +
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
              G  E A+ +  KM  +  +PT+ T      ACA +G LE+G +VH  + +  L    
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + N+L+ MY+K   +D A  +F +L    +VSWN M+ G AQ+G   E L+ F +M   
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI 385

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I+P+  + + V+ A +   ++    +   L+ +   E +V      +D+  + G +  A
Sbjct: 386 GIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRA 445

Query: 496 -RALFDMMNERHVTTWNVMIDGYGTH 520
            R + +M  E     W  ++     H
Sbjct: 446 ERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 197/373 (52%), Gaps = 5/373 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           LL+ CT L ++   R +   ++ S   D HL  Q  +V+++ K   L DA R+F+ +P K
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  ++ G+++     DA+    +M    + P  +  + LLK  G    +  G ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              +  G+   ++  + +V+MYA+CG ++ A   FD MP +  VSWN +++G A+ G  E
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L+ +M  +  +    T  S+  A A++G+L  GK VH + +++G   I  +   L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAK G ++ A+ VFD +   +VVSWN+M+    + G  +E +  F++ML  G+EP  +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           + +  L AC+  G L+ G++  +L+ + K+  DV    + + +  +   +DRA     ++
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452

Query: 402 Q-GKTLVSWNAMI 413
               T   W A++
Sbjct: 453 PIEPTAAVWGALL 465


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 339/584 (58%), Gaps = 36/584 (6%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H    R G D    ++  L   YA  GR++ +  +F   ++ +V  W ++I  +   G 
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            E+A+  + +ML QGVEP   T    L  C     +E G  +H    +L   +D+ +   
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTG 164

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVS-------------------------------W 409
           L+ +Y++   V  A  +F  +  K+LVS                               W
Sbjct: 165 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 224

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N MI GY QNG  NEAL  F +M     KP+  T++SV+ A  +L  +   +W+H+ +  
Sbjct: 225 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 284

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
           +  + NV V TAL+DMY+KCG++  AR +FD ++++ V  WN MI GY  HG  + A++L
Sbjct: 285 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 344

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F  M      P +ITF+  +SAC HSG V EG   F  +K +YGIEP ++HYG MV+LLG
Sbjct: 345 FKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLG 404

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG + +A++ ++ M IEP   ++G +LGAC++H  + LGEK    L + +    G ++L
Sbjct: 405 RAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYIL 464

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYAA   WD +A++RT+M+  G++K PGCS +E+ N+VH F +G   HP+ K IY  
Sbjct: 465 LSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMM 524

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           LE +   +K+ GY P T+ + HD+ +  +E  L  HSEKLAIAFGL+N+ PG+TI I KN
Sbjct: 525 LEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKN 584

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVC DCH  TK IS +TGR+I+VRD +RFH F NG CSCGDYW
Sbjct: 585 LRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 38/392 (9%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A+L++   ++  L +I  ++ + GL    +   KL   +     L  +  +F    +   
Sbjct: 34  AVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSV 93

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             +  ++ G+A     + A++F  +M    V P  + ++ +LK+C     I  GK +H Q
Sbjct: 94  FFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQ 149

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS----------------- 206
            +  GF  DL+  TG++++YA+ G +  A ++FD MPE+ LVS                 
Sbjct: 150 AVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAA 209

Query: 207 --------------WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
                         WN ++ G+ QNG    AL L  RM +   + + +T++S+L A   +
Sbjct: 210 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQL 269

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G+L  G+ VH Y    G    V+V TALVDMY+KCG +E ARLVFD +  ++VV+WNSMI
Sbjct: 270 GALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMI 329

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLK 370
             Y   G  +EA+++F+ M   G+ PTN+T +  L AC   G +  G  IF +K+ D+  
Sbjct: 330 VGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYG 388

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +   +     ++++  +   V++A ++   + 
Sbjct: 389 IEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 420



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 150/310 (48%), Gaps = 31/310 (10%)

Query: 62  LIIKSGLCD-----------QHLFQT----KLVSL------FCKYNSLSDAARV-FEPIP 99
           L +++GL D           Q LF T     LVSL      + K+  L DAARV F+ + 
Sbjct: 159 LYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGEL-DAARVLFDGME 217

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           ++    ++ M+ GY +    ++A+    RM      P       +L  CG +G +  G+ 
Sbjct: 218 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 277

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  +  NG   ++   T +V+MY+KCG +E+A  +FD++ ++D+V+WN+++ G+A +GF
Sbjct: 278 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 337

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM-RAGFDSIVNVST 278
           ++ AL L   M   G     IT + IL A  + G +  G  +        G +  +    
Sbjct: 338 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYG 397

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNV----VSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            +V++  + G VE A   ++ +K+ N+    V W +++ A    G      +I + ++DQ
Sbjct: 398 CMVNLLGRAGHVEQA---YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQ 454

Query: 335 GVEPTNVTIM 344
            +  +   I+
Sbjct: 455 NLANSGTYIL 464


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/682 (36%), Positives = 375/682 (54%), Gaps = 59/682 (8%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE------EAYKMF-- 196
           L+ C  + ++   K++H Q+  NG       +T +VN  A+    E      +A+++F  
Sbjct: 32  LRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKE 88

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D   +  L   N+++ G++  G    A+ L  RM   G   +  T   +L     + +  
Sbjct: 89  DVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFC 148

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            G  VHG  ++ G +  V +   L+  YA+CG ++    VF+GM  RNVVSW S+I  Y 
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
            G  P+EA+ +F +ML++                                          
Sbjct: 209 RGDRPKEAVSLFFEMLNK-----------------------------------------V 227

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           M N+L+ MY KC  +D A  +F +   + LV +N ++  YA+ G   EAL    +M  + 
Sbjct: 228 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 287

Query: 437 IKPDSFTMVSVIPALAELSVIRYAK-----WIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
            +PD  TM+S I A A+L  + Y K     W+H  + ++    ++ + TAL+DM+A+CG 
Sbjct: 288 PRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGD 347

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
             +A  +F+ M ER V+ W   I      G G+ A  LFN+ML    KP+ + F+  ++A
Sbjct: 348 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 407

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           CSH G VE+G+H F SL +D+GI P ++HYG MVDLLGRAG L EA+D I+ MP+EP   
Sbjct: 408 CSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 466

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           V+G++L AC++HKNVE+   AA R+ EL P   G HVLL+NIYA+A  W  +A+VR  + 
Sbjct: 467 VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLR 526

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-TNSIH 730
           +KG++K PG S V++   +H F SG   HP+   I   L+ +      AG++PD +N + 
Sbjct: 527 EKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLL 586

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           DV++  +E LLS HSEKLAIAFGL+ +     I + KNLR+C DCH+  K  S++  REI
Sbjct: 587 DVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREI 646

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           IVRD +RFH F+ G+CSC DYW
Sbjct: 647 IVRDNNRFHFFRQGLCSCCDYW 668



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 233/523 (44%), Gaps = 96/523 (18%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSL---FCKYNSLSDAARVFEPIPDKL- 102
           L  C +L +L+++   I K+GL       TKLV+         SL  A + FE   + + 
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91

Query: 103 --DALY--HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
             DAL+  +++++GY+      +A+   +RM    V P  Y + ++L  C  +     G 
Sbjct: 92  SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGI 151

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++HG ++  G   D+F    +++ YA+CG ++  +K+F+ M ER++VSW +++ G+A+  
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A+ L   M  +                                       +VN   
Sbjct: 212 RPKEAVSLFFEMLNK--------------------------------------VMVN--- 230

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALVDMY KCG ++ A+ +FD    RN+V +N++++ Y   G   EA+ I  +ML QG  P
Sbjct: 231 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 290

Query: 339 TNVTIMEALHACADLGDLE-----RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
             VT++ A+ A A L DL       G +VH  +++  +  D+ +  +L+ M+++C     
Sbjct: 291 DRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 350

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F+K+  + + +W A I   A  G    A   F +M  + +KPD    V V+ A + 
Sbjct: 351 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS- 409

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT---- 509
                     H                         G V     +F +M +  ++     
Sbjct: 410 ----------HG------------------------GQVEQGLHIFSLMEDHGISPQIEH 435

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           +  M+D  G  GL + A +L   M   P +PND+ +   ++AC
Sbjct: 436 YGCMVDLLGRAGLLREAFDLIKSM---PMEPNDVVWGSLLAAC 475


>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/569 (40%), Positives = 350/569 (61%), Gaps = 6/569 (1%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNV 305
           ++   SLR    +  YA+++  + +  V+  L++   +      +  AR +F+ M   ++
Sbjct: 36  ISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDI 94

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V +NSM   Y    NP E   +F ++L+ G+ P N T    L ACA    LE G  +H L
Sbjct: 95  VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +L L  +V +  +LI+MY++C+ VD A  +F ++    +V +NAMI GYA+  R NEA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEA 214

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L+ F +M+ K +KP+  T++SV+ + A L  +   KWIH    +  F K V V TALIDM
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           +AKCG++  A ++F+ M  +    W+ MI  Y  HG  + ++ +F +M     +P++ITF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L  ++ACSH+G VEEG  YF+ +   +GI P + HYG+MVDLL  AG L +A++FI K+P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLP 394

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           I P   ++  +L AC  H N++L EK + R+FELD   GG +V+L+N+YA    W+ +  
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDS 454

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R +M+ +   K PGCS +E+ N VH F+SG      + +++  L+ ++ E+K +GYVPD
Sbjct: 455 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514

Query: 726 TNSI--HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           T+ +   ++ D  +E  L  HSEKLAI FGLLN+ PG+TI + KNLRVC DCHNA K IS
Sbjct: 515 TSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLIS 574

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+ GR+++ RD+ RFH F++G CSCGD+W
Sbjct: 575 LIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 220/408 (53%), Gaps = 9/408 (2%)

Query: 24  HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
           H  T ++ + I +   ++P  LL+  C SL+EL +I    IKS + D   F  KL++ FC
Sbjct: 14  HAETFTKHSKIDTVNTQNP-ILLISKCNSLRELMQIQAYAIKSHIEDVS-FVAKLIN-FC 70

Query: 84  KYN----SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
             +    S+S A  +FE + +    ++++M +GY++F +  +  S  + +  D + P  Y
Sbjct: 71  TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            +  LLK C     +  G+++H   +  G   +++    ++NMY +C  ++ A  +FDR+
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRI 190

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            E  +V +N ++ G+A+      AL L   M  +  + + IT++S+L + A +GSL +GK
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H YA +  F   V V+TAL+DM+AKCG ++ A  +F+ M+ ++  +W++MI AY   G
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMT 378
             E++M +F++M  + V+P  +T +  L+AC+  G +E G  +  +++ +  +   +   
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370

Query: 379 NSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEA 425
            S++ + S    ++ A +   KL    T + W  ++   + +  ++ A
Sbjct: 371 GSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 179/346 (51%), Gaps = 2/346 (0%)

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A  +F+ M E D+V +N++  G+++         L   + E+G   D  T  S+L A A 
Sbjct: 82  ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
             +L  G+ +H  +M+ G D  V V   L++MY +C  V++AR VFD +    VV +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAM 201

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  Y     P EA+ +F++M  + ++P  +T++  L +CA LG L+ G ++HK   +   
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
              V +  +LI M++KC  +D A  IF K++ K   +W+AMI+ YA +G+  +++  F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           MRS+N++PD  T + ++ A +    +    K+   +V +     ++    +++D+ +  G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAG 381

Query: 491 AVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKMLE 535
            +  A    D +        W +++    +H     A ++  ++ E
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/693 (35%), Positives = 382/693 (55%), Gaps = 36/693 (5%)

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
           RG+   G  +    +        V+  + +  +  +A  +FD  P R    W   ++G A
Sbjct: 28  RGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCA 87

Query: 216 QNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           + G     +     M  EG    +   + +++   A +G +  GK VHG+ +R G    V
Sbjct: 88  RRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDV 147

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            +  A++DMYAKCG+ E AR VF  M  R+ VSWN  I A ++ G+   +M++F +   +
Sbjct: 148 VLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR 207

Query: 335 GVEPTNVTI---MEALHACADLGDLER----------------------------GIFVH 363
                N  I   M + HA   L  L R                            G  +H
Sbjct: 208 DTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLH 267

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF---SKLQGKTLVSWNAMILGYAQNG 420
             +    L  D  + +SL+ MY KC  ++ AA +F   S L      +W+ M+ GY QNG
Sbjct: 268 GRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNG 327

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           R  EAL+ F +M  + +  D FT+ SV  A A + ++   + +H  V +  ++ +  + +
Sbjct: 328 REEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLAS 387

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           A++DMYAKCG +  AR++FD    +++  W  M+  Y +HG G+ A+ELF +M      P
Sbjct: 388 AIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTP 447

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N+IT +  +SACSH GLV EG  YF  ++++YGI P ++HY  +VDL GR+G L++A +F
Sbjct: 448 NEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNF 507

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I++  I     V+  +L AC++H++ E  + A+ +L +L+  + G +V+L+NIYA  + W
Sbjct: 508 IEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKW 567

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
               ++R  M+++ ++K PG S + LKN VH+F +G   HPQS  IY +LE L++ +K  
Sbjct: 568 HDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEI 627

Query: 721 GYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GY   T+  +HDVED  +E  L  HSEKLAIAFG++++  G+ + I KNLRVC DCH A 
Sbjct: 628 GYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAI 687

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KYISL TGREI+VRD++RFH FK+  CSC D+W
Sbjct: 688 KYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 231/487 (47%), Gaps = 45/487 (9%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-D 133
           +  ++  + +     DA  VF+  P +   ++   + G A+     D +     M  + +
Sbjct: 48  RASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGE 107

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
             P  +    +++ C  +G++  GK +HG ++ NG  LD+     V++MYAKCGQ E A 
Sbjct: 108 ATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERAR 167

Query: 194 K-------------------------------MFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +                               +FD  P RD  SWNTI++G  ++G A  
Sbjct: 168 RVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD 227

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL  + RM + G   +  T  +       +    +G+ +HG  + A  +    V ++L+D
Sbjct: 228 ALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMD 287

Query: 283 MYAKCGRVETARLVFDGMK--SRNV-VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           MY KCG +E A  VFD     +R++  +W++M+A YV+ G  EEA+ +F++ML +GV   
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAAD 347

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T+     ACA++G +E+G  VH  +++L    D  + ++++ MY+KC  ++ A  IF 
Sbjct: 348 RFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFD 407

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           +   K +  W +M+  YA +G+   A+  F +M ++ + P+  T+V V+ A + + ++  
Sbjct: 408 RACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSE 467

Query: 460 AKWIHALVIRSCFEKNVFVMT-----ALIDMYAKCGAVGTARALFDMMNERH-VTTWNVM 513
            +    L  +   E+   V +      ++D+Y + G +  A+   +  N  H    W  +
Sbjct: 468 GE----LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTL 523

Query: 514 IDGYGTH 520
           +     H
Sbjct: 524 LSACRLH 530



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 150/283 (53%), Gaps = 8/283 (2%)

Query: 39  YRHPSALLLEVCTSLKEL-RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE- 96
           Y + +A +L     L +L R++   ++ + L      ++ L+ ++CK   L  AA VF+ 
Sbjct: 245 YTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH 304

Query: 97  --PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
             P+   ++  + TM+ GY +    ++A+    RM  + VA   +  T +   C +VG +
Sbjct: 305 WSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMV 364

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
            +G+++HG +    + LD    + +V+MYAKCG +E+A  +FDR   +++  W +++  +
Sbjct: 365 EQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSY 424

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           A +G   +A++L  RM  E    + IT+V +L A ++VG +  G+ ++   M+  +  + 
Sbjct: 425 ASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE-LYFKQMQEEYGIVP 483

Query: 275 NVS--TALVDMYAKCGRVETAR-LVFDGMKSRNVVSWNSMIAA 314
           ++     +VD+Y + G ++ A+  + +   +   + W ++++A
Sbjct: 484 SIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSA 526


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/687 (35%), Positives = 393/687 (57%), Gaps = 20/687 (2%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
           T L+  C  +  +  G+ +H  LI+ GF  D+   T ++ MYAKCG +++A ++F+ M  
Sbjct: 14  TSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEI 73

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           +DL +W++I++ +A+ G  E+A+ L  RM  EG   + +T    L   A+V  L  G+A+
Sbjct: 74  KDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 133

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   + +       +  +L++MY KC  +  AR VF+GMK+RNV S+ +MI+AYV+ G  
Sbjct: 134 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 193

Query: 322 EEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EA+ +F +M   + +EP   T    L A   LG+LE+G  VH+ L      T+V + N+
Sbjct: 194 AEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNA 253

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L++MY KC     A  +F  +  + ++SW +MI  YAQ+G   EALN F +M   +++P 
Sbjct: 254 LVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPS 310

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             +  S + A A L  +   + IH  V+ +    +  + T+L+ MYA+CG++  AR +F+
Sbjct: 311 GVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDARRVFN 369

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R   + N MI  +  HG  K A+ ++ +M +     + ITF+  + ACSH+ LV +
Sbjct: 370 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVAD 429

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
              +F SL  D+G+ P+++HY  MVD+LGR+GRL +A + ++ MP +     +  +L  C
Sbjct: 430 CRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGC 489

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           K H ++  GE+AA ++FEL P E   +V L+N+YAAA  +D   +VR  ME++G+     
Sbjct: 490 KRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVA 549

Query: 681 CSLVELKNEVHSFYSGSTKHPQS-------KRIYTFLETLIDEIKAAGYVPDTNSIH--- 730
            S +E+ NE+H F SG     Q        +R+ + L  L++ +K AGYVPDT  ++   
Sbjct: 550 VSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTREVYLEQ 609

Query: 731 --DVEDYVQENLLSSHSEKLAIAFGLLNS-SPGSTIHIR--KNLRVCGDCHNATKYISLV 785
                +  ++  L  HSE+LAIA+GL+ +  P  +  +R   + RVC DCH+A K +S +
Sbjct: 610 QGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIKLLSDI 669

Query: 786 TGREIIVRDMHRFHCFKNGVCSCGDYW 812
             + I VRD +RFH F+ G CSCGD+W
Sbjct: 670 IEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 257/482 (53%), Gaps = 10/482 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  CT L+ L   RR+   +I +G       +T L+ ++ K  SL DA RVFE +  K 
Sbjct: 16  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +++  YA+    + AV    RM  + V P V  +   L  C  V  +  G+ IH 
Sbjct: 76  LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +++ +    D      ++NMY KC ++ EA K+F+ M  R++ S+  +++ + Q G    
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195

Query: 223 ALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           AL+L +RM + E    +  T  +IL AV  +G+L  G+ VH +    GFD+ V V  ALV
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            MY KCG    AR VFD M +RNV+SW SMIAAY + GNP+EA+ +F++M    VEP+ V
Sbjct: 256 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGV 312

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +   AL+ACA LG L+ G  +H  + +  L +   M  SL+SMY++C  +D A  +F+++
Sbjct: 313 SFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDDARRVFNRM 371

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + +   S NAMI  + Q+GR  +AL  + +M  + I  D  T VSV+ A +  S++   +
Sbjct: 372 KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCR 431

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGT 519
            +  +LV+       V     ++D+  + G +G A  L + M  +     W  ++ G   
Sbjct: 432 DFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKR 491

Query: 520 HG 521
           HG
Sbjct: 492 HG 493



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 225/416 (54%), Gaps = 11/416 (2%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M E G   D   + S++ A   + +L  G+ +H + +  GF + + + TAL+ MYAKCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ A+ VF+GM+ +++ +W+S+I+AY   G  E A+ ++++M+ +GVEP  VT   AL  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA +  L  G  +H+ +   K+  D  + +SL++MY KC ++  A  +F  ++ + + S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 410 NAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
            AMI  Y Q G   EAL  F +M + + I+P+++T  +++ A+  L  +   + +H  + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
              F+ NV V  AL+ MY KCG+   AR +FD M  R+V +W  MI  Y  HG  + A+ 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF +M     +P+ ++F  A++AC+  G ++EG      + + +   P M+   +++ + 
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
            R G L++A     +M      +   AM+ A   H      +K A R++     EG
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHGR----KKQALRIYRRMEQEG 406


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/647 (37%), Positives = 383/647 (59%), Gaps = 26/647 (4%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +  +  G+V+ Y K G I EA K+FD+MPER++VSW ++V G+ Q G  + A  L  RM 
Sbjct: 77  NTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP 136

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI----VNVSTALVDMYAKC 287
           E+    + ++   +L  +   G  R+ +A      R  FD I    V  ST ++      
Sbjct: 137 EK----NVVSWTVMLGGLIEDG--RVDEA------RRLFDMIPVKDVVASTNMIGGLCSE 184

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           GR+  AR +FD M  RNVV+W SMI+ Y      + A ++F+ M D+      VT    L
Sbjct: 185 GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAML 240

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
                 G +     + K +        V+  N +I  +    +V +A  +F +++ K   
Sbjct: 241 KGYTRSGRINEAAELFKAMPV----KPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDG 296

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           +W+A+I  Y + G   EAL  F  M+ + ++P+  +++S++     L+ + + + +H+ +
Sbjct: 297 TWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQL 356

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +RS F+ +++V + LI MY KCG + T + +FD  + + +  WN +I GY  HG G+ A+
Sbjct: 357 VRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKAL 416

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           E+F++M      P++ITF+  +SAC ++G V+EG+  F S+K  Y ++   +HY  MVDL
Sbjct: 417 EVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDL 476

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG+LNEA + I+ MP+E    V+GA+L AC+ HKN++L E AA +L +L+P   G +
Sbjct: 477 LGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPY 536

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY-SGSTKHPQSKRI 706
           +LL+N+YA+ S W  +A++R  M  + + K+PGCS +E+ N+VH F   GS  HP+ + I
Sbjct: 537 ILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMI 596

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
              LE L   ++ AGY PD + + HDV++  + + L  HSEK+A+A+GLL    G  I +
Sbjct: 597 MKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRV 656

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVCGDCH+A K I+ VTGREII+RD +RFH FK+G+CSC D+W
Sbjct: 657 MKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 212/445 (47%), Gaps = 18/445 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS + K   +S+A +VF+ +P++    + +M++GY +   +D+A     RM   +V   
Sbjct: 84  LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV-- 141

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L    + G +   + +   + V     D+ A T ++      G++ EA ++FD
Sbjct: 142 --SWTVMLGGLIEDGRVDEARRLFDMIPVK----DVVASTNMIGGLCSEGRLSEAREIFD 195

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP+R++V+W ++++G+A N   ++A  L   M ++      +T  ++L      G  RI
Sbjct: 196 EMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNE----VTWTAMLKGYTRSG--RI 249

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            +A   +  +A     V     ++  +   G V  AR VFD MK ++  +W+++I  Y  
Sbjct: 250 NEAAELF--KAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYER 307

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F  M  +GV P   +I+  L  C  L  L+ G  VH  L +     D+ +
Sbjct: 308 KGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYV 367

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
           ++ LI+MY KC  +     +F +   K +V WN++I GYAQ+G   +AL  F +M S   
Sbjct: 368 SSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGA 427

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            PD  T + V+ A      ++    I  ++  +   ++       ++D+  + G +  A 
Sbjct: 428 APDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAM 487

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTH 520
            L + M  E     W  ++    TH
Sbjct: 488 NLIENMPVEADAIVWGALLSACRTH 512



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 178/363 (49%), Gaps = 14/363 (3%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           + E RR+  +I    +    +  T ++   C    LS+A  +F+ +P +    + +M+ G
Sbjct: 156 VDEARRLFDMIPVKDV----VASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISG 211

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           YA    +D A      M   D   V +  T +LK     G I    E+   + V   +  
Sbjct: 212 YAMNNKVDVARKLFEVM--PDKNEVTW--TAMLKGYTRSGRINEAAELFKAMPVKPVA-- 265

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
             A  G++  +   G++ +A  +FD+M E+D  +W+ ++  + + GF   AL L + M  
Sbjct: 266 --ACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQR 323

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
           EG R +F +I+SIL    ++ SL  G+ VH   +R+ FD  + VS+ L+ MY KCG + T
Sbjct: 324 EGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVT 383

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
            + VFD   S+++V WNS+IA Y + G  E+A+ +F +M   G  P  +T +  L AC  
Sbjct: 384 GKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGY 443

Query: 353 LGDLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWN 410
            G ++ G+ +   +  + ++         ++ +  +  K++ A ++   +  +   + W 
Sbjct: 444 TGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 503

Query: 411 AMI 413
           A++
Sbjct: 504 ALL 506



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 171/393 (43%), Gaps = 55/393 (13%)

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
           ++ +A+ GQI+ A  +FD +  + + SWN IVAG+  N     A  L  +M E       
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER------ 76

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
                      N  S                         LV  Y K G +  AR VFD 
Sbjct: 77  -----------NTISW----------------------NGLVSGYVKNGMISEARKVFDK 103

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  RNVVSW SM+  YV+ G  +EA  +F +M ++ V   + T+M  L    + G ++  
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNV--VSWTVM--LGGLIEDGRVDEA 159

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
               +L D + +   V+ TN +  + S+  ++  A +IF ++  + +V+W +MI GYA N
Sbjct: 160 ---RRLFDMIPVKDVVASTNMIGGLCSE-GRLSEAREIFDEMPQRNVVAWTSMISGYAMN 215

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            +V+ A   F  M  KN      T  +++        I  A    A + ++   K V   
Sbjct: 216 NKVDVARKLFEVMPDKN----EVTWTAMLKGYTRSGRINEA----AELFKAMPVKPVAAC 267

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             +I  +   G VG AR +FD M E+   TW+ +I  Y   G    A+ LF+ M     +
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           PN  + +  +S C     ++ G    + L + +
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 52/391 (13%)

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           R+ F S   ++   +  +A+ G+++ AR +FD ++S+ V SWN+++A Y     P EA +
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTDVSMTNSLISM 384
           +F KM ++     N  +          G ++ G+     K+ D++     VS T S++  
Sbjct: 69  LFDKMPERNTISWNGLVS---------GYVKNGMISEARKVFDKMPERNVVSWT-SMVRG 118

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y +   +D A  +F ++  K +VSW  M+ G  ++GRV+EA   F  +  K++   S  M
Sbjct: 119 YVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVA-STNM 177

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           +  + +   LS  R        +     ++NV   T++I  YA    V  AR LF++M +
Sbjct: 178 IGGLCSEGRLSEARE-------IFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-------SGL 557
           ++  TW  M+ GY   G    A ELF  M   P KP        ++AC+        +G 
Sbjct: 231 KNEVTWTAMLKGYTRSGRINEAAELFKAM---PVKP--------VAACNGMIMGFGLNGE 279

Query: 558 VEEGIHYFTSLK-KDYGIEPVMDHYGAMVDLLGRAGRLNEA---WDFIQKMPIEPGITVF 613
           V +    F  +K KD G       + A++ +  R G   EA   +  +Q+  + P     
Sbjct: 280 VGKARWVFDQMKEKDDGT------WSALIKIYERKGFELEALALFSLMQREGVRPNFPSI 333

Query: 614 GAMLGACKIHKNVELGEKAANRL----FELD 640
            ++L  C    +++ G +  ++L    F+LD
Sbjct: 334 ISILSVCGSLASLDHGRQVHSQLVRSHFDLD 364



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 8/179 (4%)

Query: 42  PSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           PS + +L VC SL  L   R++   +++S         + L++++ K   L    RVF+ 
Sbjct: 331 PSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDR 390

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
              K   ++++++ GYA+    + A+     M     AP    +  +L  CG  G+++ G
Sbjct: 391 FSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEG 450

Query: 158 KEIHGQLIVNGFSLDLFA--MTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
            EI  + + + + +D        +V++  + G++ EA  + + MP E D + W  +++ 
Sbjct: 451 LEIF-ESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/786 (32%), Positives = 416/786 (52%), Gaps = 106/786 (13%)

Query: 132 DDVAPVVYNYTYLLKVCGDV--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           D V  +   Y   L++C  +    ++  + +HG +I  GF      +  ++++Y K  ++
Sbjct: 6   DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSEL 65

Query: 190 EEAYKMFDRMPE---------------------------------RDLVSWNTIVAGFAQ 216
           + A ++FD + E                                 RD V +N ++ GF+ 
Sbjct: 66  DYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSH 125

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVN 275
           N     A++L  +M  EG + D  T  S+L  +A  V   +     H  A+++G   + +
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTS 185

Query: 276 VSTALVDMYAKCGR----VETARLVFDGMKSRNVVSW----------------------- 308
           VS ALV +Y++C      + +AR VFD +  ++  SW                       
Sbjct: 186 VSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGM 245

Query: 309 ---------NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
                    N+MI+ YV  G  +EA+ + ++M+  G+E    T    + ACA+   L+ G
Sbjct: 246 DENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLG 305

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH  + + +        NSL+++Y KC K + A  IF K+  K LVSWNA++ GY  +
Sbjct: 306 KQVHAYVLR-REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSS 364

Query: 420 GRVNEALNYFCKMRSKNI-------------------------------KPDSFTMVSVI 448
           G + EA   F +M+ KNI                               +P  +     I
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            + A L      +  HA +++  F+ ++    ALI MYAKCG V  A+ +F  M      
Sbjct: 425 KSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +WN +I   G HG G  AV+++ +ML+   +P+ ITFL  ++ACSH+GLV++G  YF S+
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSM 544

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
           +  Y I P  DHY  ++DLL R+G+ +EA   I+ +P +P   ++ A+L  C++H N+EL
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMEL 604

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G  AA++LF L P+  G ++LL+N+YAA   W+++A+VR +M  +G++K   CS +E++ 
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE-DYVQENLLSSHSE 746
           +VH+F    T HP+++ +Y +L+ L  E++  GYVPDT+ + HDVE D  +E++L++HSE
Sbjct: 665 QVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSE 724

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           K+A+AFGL+   PG+TI I KNLR CGDCHN  +++S V  R+II+RD  RFH F+NG C
Sbjct: 725 KIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGEC 784

Query: 807 SCGDYW 812
           SCG++W
Sbjct: 785 SCGNFW 790



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 258/573 (45%), Gaps = 75/573 (13%)

Query: 75  QTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +T +VS +C    ++ A  VFE  P+  +   +Y+ M+ G++       A++   +M+++
Sbjct: 83  RTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142

Query: 133 DVAPVVYNYTYLLK-VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--- 188
              P  + Y  +L  +   V + ++  + H   + +G          +V++Y++C     
Sbjct: 143 GFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202

Query: 189 -IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL------------------------- 222
            +  A K+FD +PE+D  SW T++ G+ +NG  +L                         
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262

Query: 223 -------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
                  AL++V RM   G   D  T  S++ A AN   L++GK VH Y +R   D   +
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFH 321

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV------------------- 316
              +LV +Y KCG+   AR +F+ M ++++VSWN++++ YV                   
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 317 ------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
                       E G  EE +++F  M  +G EP +     A+ +CA LG    G   H 
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHA 441

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            L ++   + +S  N+LI+MY+KC  V+ A  +F  +     VSWNA+I    Q+G   E
Sbjct: 442 QLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVE 501

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALI 483
           A++ + +M  K I+PD  T ++V+ A +   ++    K+ +++               LI
Sbjct: 502 AVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLI 561

Query: 484 DMYAKCGAVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           D+  + G    A ++ + +  +     W  ++ G   HG  +  +   +K+  G    +D
Sbjct: 562 DLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF-GLIPEHD 620

Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            T++   +  + +G  EE +     L +D G++
Sbjct: 621 GTYMLLSNMYAATGQWEE-VARVRKLMRDRGVK 652



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 41/286 (14%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA----------- 122
           F   LV+L+ K    ++A  +FE +P K    ++ +L GY     + +A           
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381

Query: 123 -VSFLIR-------------------MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            +S++I                    M+ +   P  Y ++  +K C  +G    G++ H 
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHA 441

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           QL+  GF   L A   ++ MYAKCG +EEA ++F  MP  D VSWN ++A   Q+G    
Sbjct: 442 QLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVE 501

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG-----YAMRAGFDSIVNVS 277
           A+D+   M ++G R D IT +++L A ++ G +  G+         Y +  G D      
Sbjct: 502 AVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYAR-- 559

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
             L+D+  + G+   A  + + +  +     W ++++     GN E
Sbjct: 560 --LIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME 603


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/592 (41%), Positives = 355/592 (59%), Gaps = 15/592 (2%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           T+LKG A        V F  R  Y        ++ YLL  C  + ++ R   IH  ++ N
Sbjct: 8   TLLKGLAPIKR----VLFDFRTNYHS-----RSFNYLLNCCSSLPDLSR---IHALVVTN 55

Query: 168 GFSLDLFAMTGVVNMYAKC--GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           G   +L   T ++ + A C    ++ A KMFD+MP+RD+  WNT++ G+A  G  E AL 
Sbjct: 56  GCGQNLLLSTKLI-ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALA 114

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L + MH  G   D  T   ++ + A + +LR GK VH   ++ GFDS V V ++LV MY+
Sbjct: 115 LYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYS 174

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           + G      LVF  M  RN+VSW ++IA YV+    +E + +F++M+  G +P  VT++ 
Sbjct: 175 QSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVS 234

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            L ACA L  L  G  +H    +L +  DVS+TN+LI++Y KC  V+ A  +F  +  + 
Sbjct: 235 VLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQN 294

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           LVSWNAMI  Y QN     A+  F +M+++ +  D  TMVSVI A A L  +   +W+H 
Sbjct: 295 LVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHE 354

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
           LV R   E NV +  ALIDMYAKCG +  AR +F+ +  R V +W  MI    +HG G+ 
Sbjct: 355 LVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGED 414

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A++LF++M +   KPN  TF    +AC HSGLVEEG  +F S+ +DY I P ++H   MV
Sbjct: 415 ALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMV 474

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG L EA++FI KMP+EP ++V+GA+LG+C+IH N+EL E  A +LF LDP    
Sbjct: 475 DLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVT 534

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           ++VL++NIYA A  W+  A++R +ME++ L+K PG SLVE+    H+F SGS
Sbjct: 535 FYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGS 586



 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 161/508 (31%), Positives = 282/508 (55%), Gaps = 5/508 (0%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR-VFEPIPDKLDA 104
           LL  C+SL +L RI  L++ +G     L  TKL+   C      D AR +F+ +P +   
Sbjct: 35  LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVF 94

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           L++T+++GYA     ++A++    M    + P  Y + ++++ C  +  +R GKE+H  +
Sbjct: 95  LWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI 154

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           + +GF  D+F  + +V MY++ G+      +F  M  R++VSW  ++AG+ QN + +  L
Sbjct: 155 VKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGL 214

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            +   M   G + + +T+VS+LPA A +  L +GK +HGY ++ G D  V+++ AL+ +Y
Sbjct: 215 GVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALY 274

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG VETAR +FDGM  +N+VSWN+MIAAY +      A+++F++M  + V+   +T++
Sbjct: 275 GKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMV 334

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             + ACA LG L  G ++H+L+ +  L  +VS+TN+LI MY+KC  +D A ++F +L  +
Sbjct: 335 SVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCR 394

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWI 463
           ++VSW +MI   A +G   +AL  F +M+ + +KP+SFT  +V  A     ++    K  
Sbjct: 395 SVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHF 454

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGL 522
            +++        V     ++D+  + G++  A    D M  E  V+ W  ++     H  
Sbjct: 455 ESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSN 514

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAIS 550
            + A  +  K+      P  +TF   +S
Sbjct: 515 LELAELVAEKLF--LLDPQTVTFYVLMS 540


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/661 (36%), Positives = 369/661 (55%), Gaps = 76/661 (11%)

Query: 228 TRMHEEGRRGDFITIVSILP-AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
           + +H   R   F     +LP A  +  +L + +A+H  A  +G      V+++L+  Y +
Sbjct: 5   SSLHHFLRHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLR 64

Query: 287 CGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVT- 342
            G    AR +FDGM    R VV W++++AA+   G+ E A R+ ++M  D GVEP  +T 
Sbjct: 65  LGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITW 124

Query: 343 -----------------------------------IMEALHACADLGDLERGIFVHKLLD 367
                                              +  AL A  D+G +  G  +H    
Sbjct: 125 NGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAV 184

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA---------- 417
           +     D  +  +LI MY KC +      +F +     + S NA+I G +          
Sbjct: 185 KAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALR 244

Query: 418 -------------------------QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
                                    QNG+  EA+ +F +M+++  +P+S T+  V+PA A
Sbjct: 245 LFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFA 304

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            ++ + + +  H   +R  F  +V+V +AL+DMYAKCG V  AR +FD M  R+V +WN 
Sbjct: 305 NVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNA 364

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI GY  +G    AV +F+ ML+   KP+ +TF C ++AC+ +GL EEG HYF  +  +Y
Sbjct: 365 MIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEY 424

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G+ P M+HY  MV LLGRAG+L+EA+D I  MP EP   ++G++LG+C++H NV+L E A
Sbjct: 425 GVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVA 484

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A +LF L+P+  G +VLL+NIYA+  MWD++ +VR +M+  GL+K  GCS +E+KN+VH 
Sbjct: 485 AEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHM 544

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
             +G   HP    I   +  L  +++  G+VP T+ + HDVE+  ++++L+ HSEKLA+A
Sbjct: 545 LLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVA 604

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
            GL+++SPG+T+ + KNLR+CGDCH A K+IS   GREI VRD +RFH F  G CSCGD+
Sbjct: 605 LGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDF 664

Query: 812 W 812
           W
Sbjct: 665 W 665



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 194/451 (43%), Gaps = 77/451 (17%)

Query: 26  HTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           H   +    P   +  P+A   + C +L   R +  +   SGL       + L+  + + 
Sbjct: 8   HHFLRHVSFPPDPHLLPTAF--KSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRL 65

Query: 86  NSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYT 142
            +  +A  +F+  P P +    +  ++  +A     + A   L  MR D  V P V  + 
Sbjct: 66  GTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWN 125

Query: 143 YL------------------------------------LKVCGDVGEIRRGKEIHGQLIV 166
            L                                    L   GDVG +  G+++HG  + 
Sbjct: 126 GLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVK 185

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD----------------------------- 197
            G   D   +T +++MY KCGQ  E  ++FD                             
Sbjct: 186 AGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRL 245

Query: 198 ------RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
                 R  E ++VSW +IVA   QNG    A++    M  +G   + +TI  +LPA AN
Sbjct: 246 FKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFAN 305

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           V +L  G++ H +A+R GF   V VS+ALVDMYAKCGRV+ AR++FD M SRNVVSWN+M
Sbjct: 306 VAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAM 365

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLK 370
           I  Y   G    A+ +F  ML    +P  VT    L AC   G  E G  +  ++ ++  
Sbjct: 366 IGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYG 425

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +   +     ++++  +  K+D A D+ S +
Sbjct: 426 VSPRMEHYACMVTLLGRAGKLDEAYDLISDM 456



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 41/318 (12%)

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMP-----ERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           + +V  +A  G  E A+++ + M      E ++++WN +V+G  ++G A  A+  +  MH
Sbjct: 89  SALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMH 148

Query: 232 EEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            EG  R D   +   L AV +VG + +G+ +HGYA++AG  +   V TAL+DMY KCG+ 
Sbjct: 149 GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQA 208

Query: 291 ETARLVFD---------------GMKSR--------------------NVVSWNSMIAAY 315
                VFD               G+                       NVVSW S++A  
Sbjct: 209 AEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACC 268

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
           V+ G   EA+  F++M  QG EP +VTI   L A A++  L  G   H    +     DV
Sbjct: 269 VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV 328

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            ++++L+ MY+KC +V  A  IF  +  + +VSWNAMI GYA  G    A+  F  M   
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 436 NIKPDSFTMVSVIPALAE 453
             KPD  T   ++ A  +
Sbjct: 389 KQKPDMVTFTCLLAACTQ 406



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 10/225 (4%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +AV F   M+     P       +L    +V  +  G+  H   +  GF  D++  + +V
Sbjct: 276 EAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALV 335

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MYAKCG++++A  +FD M  R++VSWN ++ G+A  G A  A+ +   M +  ++ D +
Sbjct: 336 DMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMV 395

Query: 241 TIVSILPAVANVGSLRIG----KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RL 295
           T   +L A    G    G    K +H      G    +     +V +  + G+++ A  L
Sbjct: 396 TFTCLLAACTQAGLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDL 452

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           + D     +   W S++ +    GN + A    +K+    +EP N
Sbjct: 453 ISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFH--LEPEN 495



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 8/157 (5%)

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
           + +L++F  +R  +  PD   + +   +   L +   A+ +HA+   S   ++ FV ++L
Sbjct: 4   SSSLHHF--LRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSL 58

Query: 483 IDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTK 539
           +  Y + G  G ARALFD M   +R V  W+ ++  +   G  + A  L  +M  +G  +
Sbjct: 59  LHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVE 118

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           PN IT+   +S  + SG   + +    ++  +  + P
Sbjct: 119 PNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRP 155



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           ++ G        + LV ++ K   + DA  +F+ +  +    ++ M+ GYA +    +AV
Sbjct: 320 LRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAV 379

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG----KEIHGQLIVNGFSLDLFAMTGV 179
                M      P +  +T LL  C   G    G    KE+H +    G S  +     +
Sbjct: 380 WMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEY---GVSPRMEHYACM 436

Query: 180 VNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELA 223
           V +  + G+++EAY +   MP E D   W +++     +G  +LA
Sbjct: 437 VTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 368/643 (57%), Gaps = 49/643 (7%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ-NGFAELALDLVTRM 230
           D+ ++   +  + +   +E A  +F++M  R  V+WNT+++G+ +  G  + A +L  ++
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            E       I +V  L +          KA   +  +     I + +T L+  +A+ G++
Sbjct: 132 PEPDSVSYNIMLVCYLRSYG-------VKAALAFFNKMPVKDIASWNT-LISGFAQNGQM 183

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + A  +F  M  +N VSW++MI+ YVE G+ E A  +++          NV +       
Sbjct: 184 QKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYK----------NVGM------- 226

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
                                   V +  ++++ Y K  KV+ A  IF ++  K LV+WN
Sbjct: 227 ----------------------KSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWN 264

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           +MI GY +N R  + L  F  M    ++P+  ++ SV+   + LS +   + +H LV +S
Sbjct: 265 SMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS 324

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
              K+    T+LI MY KCG + +A  LF  M  + V TWN MI GY  HG G+ A+ LF
Sbjct: 325 PLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLF 384

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           +KM  G  KP+ ITF+  I AC+H+G V+ G+ YF S+KK++GIE    HY  ++DLLGR
Sbjct: 385 DKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGR 444

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGRL+EA   I++MP  P   ++G +LGAC+IHKN++L E AA  L  LDP     +V L
Sbjct: 445 AGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQL 504

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           ANIYAA + WD++AKVR +M++  + K PG S +E+K+  H F S    HP+   I+  L
Sbjct: 505 ANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKL 564

Query: 711 ETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
             L  ++K AGYVPD   ++HDVE+  +E LL  HSEKLAIAFGL+ ++PG+ I + KNL
Sbjct: 565 NELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNL 624

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH A K+IS +  REIIVRD  RFH F+NG CSCGDYW
Sbjct: 625 RVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 172/356 (48%), Gaps = 14/356 (3%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A   F  +P K  A ++T++ G+A+   +  A           V P     ++   + G 
Sbjct: 155 ALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLF------SVMPEKNGVSWSAMISGY 208

Query: 151 V--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           V  G++   +E++  + +    ++   +TG    Y K G++E A ++F RM  ++LV+WN
Sbjct: 209 VEHGDLEAAEELYKNVGMKSVVVETAMLTG----YMKFGKVELAERIFQRMAVKNLVTWN 264

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++AG+ +N  AE  L +   M E   R + +++ S+L   +N+ +L +G+ +H    ++
Sbjct: 265 SMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS 324

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                    T+L+ MY KCG +++A  +F  M  ++V++WN+MI+ Y + G   +A+ +F
Sbjct: 325 PLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLF 384

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSK 387
            KM +  ++P  +T +  + AC   G ++ G+ +   +  +  +         +I +  +
Sbjct: 385 DKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGR 444

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
             ++D A  +  ++      +    +LG  +  + N  L  F      N+ P S T
Sbjct: 445 AGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHK-NLDLAEFAARNLLNLDPTSAT 499



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 117/220 (53%), Gaps = 1/220 (0%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +T +++ + K+  +  A R+F+ +  K    +++M+ GY +    +D +     M    V
Sbjct: 232 ETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV 291

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P   + + +L  C ++  +  G+++H  +  +  S D  A T +++MY KCG ++ A+K
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F  MP +D+++WN +++G+AQ+G    AL L  +M     + D+IT V+++ A  + G 
Sbjct: 352 LFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411

Query: 255 LRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           + +G +         G ++     T ++D+  + GR++ A
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEA 451



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 135/336 (40%), Gaps = 77/336 (22%)

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-NGRVNEALNYF- 429
            +DV   N  I+ + +   ++ A ++F K+  +T V+WN M+ GY +  G+V EA   F 
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 430 ---------------CKMRSKNIKP------------------------------DSFTM 444
                          C +RS  +K                                +F +
Sbjct: 130 KIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDL 189

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFE-----------KNVFVMTALIDMYAKCGAVG 493
            SV+P   E + + ++  I   V     E           K+V V TA++  Y K G V 
Sbjct: 190 FSVMP---EKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVE 246

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  M  +++ TWN MI GY  +   +  +++F  M+E   +PN ++    +  CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 554 HSGLVEEG--IHYFTS---LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +   +  G  +H   S   L KD           +++ +  + G L+ AW    +MP + 
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKD------TTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 609 GITVFGAMLGACKIH----KNVELGEKAANRLFELD 640
            IT + AM+     H    K + L +K  N   + D
Sbjct: 361 VIT-WNAMISGYAQHGAGRKALHLFDKMRNGTMKPD 395



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 31  RAYIPSRIYRHPSAL--LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           +  I SR+  +P +L  +L  C++L  L   R++  L+ KS L       T L+S++CK 
Sbjct: 284 KTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC 343

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
             L  A ++F  +P K    ++ M+ GYA+  +   A+    +MR   + P    +  ++
Sbjct: 344 GDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVI 403

Query: 146 KVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
             C   G +  G +    +    G        T V+++  + G+++EA  +   MP
Sbjct: 404 LACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/739 (33%), Positives = 412/739 (55%), Gaps = 5/739 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++ SGL         L+++F     + DA R+F+ + ++    ++ M+  Y+        
Sbjct: 171 VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC 230

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
              L  MR+ +V P V     L+ VC     +  G  IH   + +G    +  +  +VNM
Sbjct: 231 FIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNM 290

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFI 240
           Y+  G+++EA  +F  M  RD++SWNT+++ + Q+     AL+ + ++   +EG   + +
Sbjct: 291 YSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP-PNSM 349

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  S L A ++  +L  G+ +H   ++    +++ +  +L+ MY+KC  +E    VF+ M
Sbjct: 350 TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM 409

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER-G 359
              +VVS N +   Y    +   AMR+F  M   G++P  +T++     C  LGDL   G
Sbjct: 410 PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYG 469

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           + +H  + Q  L +D  +TNSLI+MY+ C  ++ +  IFS++  K+++SWNA+I    ++
Sbjct: 470 MPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH 529

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR  EA+  F   +    K D F +   + + A L+ +     +H L +++  + +  V+
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            A +DMY KCG +            R    WN +I GY  +G  K A + F  M+    K
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ +TF+  +SACSH+GL+++G+ Y+ S+   +G+ P + H   +VDLLGR G+  EA  
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI +MP+ P   ++ ++L + + HKN+++G KAA  L ELDP +   +VLL+N+YA  + 
Sbjct: 710 FIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNAR 769

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W  + K+R+ M+   L K P CS ++LKNEV +F  G   H  +++IY  L+ ++ +++ 
Sbjct: 770 WVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLRE 829

Query: 720 AGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GYV DT+S +HD ++  +E+ L +HSEKLA+A+GLL    GSTI I KNLRVC DCH  
Sbjct: 830 VGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLV 889

Query: 779 TKYISLVTGREIIVRDMHR 797
            K +S+V  REI++RD +R
Sbjct: 890 FKLVSMVFHREIVLRDPYR 908



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 266/540 (49%), Gaps = 5/540 (0%)

Query: 59  ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFAS 118
           I  L  ++GL       T L+ L+     + +A R+F  +P +    +  ++   +    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           +++A+    RMR + V         ++ +CG + +   G ++   ++V+G    +     
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           ++ M+    ++++A ++FDRM ERD +SWN +++ ++          +++ M     + D
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T+ S++   A+   + +G  +H   + +G    V +  ALV+MY+  G+++ A  +F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDL 356
            M  R+V+SWN+MI++YV+  +  EA+    ++L  D+G  P ++T   AL AC+    L
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALGACSSPEAL 364

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G  +H ++ Q  L   + + NSL++MYSKC  ++    +F  +    +VS N +  GY
Sbjct: 365 MNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR-YAKWIHALVIRSCFEKN 475
           A    V  A+  F  MR   IKP+  TM+++      L  +  Y   +HA V ++    +
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            ++  +LI MYA CG + ++  +F  +N + V +WN +I     HG G+ A++LF     
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              K +       +S+ ++   +EEG+     L    G++       A +D+ G+ G+++
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGKMD 603



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 236/530 (44%), Gaps = 18/530 (3%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR- 156
           +P +  + ++T + G A+      A + L  MR  DV    +    L+  C   G     
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 157 --GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G  IH      G   +++  T ++++Y   G +  A ++F  MP+R++VSW  I+   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           + NG  E AL    RM +EG   +   + +++     +     G  V  + + +G  + V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
           +V+ +L+ M+    RV+ A  +FD M+ R+ +SWN+MI+ Y       +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            V+P   T+   +  CA    +  G  +H L     L   V + N+L++MYS   K+D A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAE 453
             +F  +  + ++SWN MI  Y Q+    EAL    + +++    P+S T  S + A + 
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
              +   + IHA++++   +  + +  +L+ MY+KC ++     +F+ M    V + NV+
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE---GIHYFTS--- 567
             GY        A+ +F+ M     KPN IT +     C   G +      +H + +   
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 568 -LKKDYGIEPVMDHYGAMVDLLGRAG---RLNE----AWDFIQKMPIEPG 609
            L  +Y    ++  Y    DL    G   R+N     +W+ I    +  G
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHG 530


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/605 (39%), Positives = 350/605 (57%), Gaps = 34/605 (5%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           +V  L A A   S  IGK +H + ++ G D   ++S  L++MY KCG ++ A  +F+ + 
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGI 360
            R+ +SW S++ A  +   P   + +F  M  Q G++P +      + ACA LG +++G 
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            VH       +  D  + +SL+ MY+KC   D    +F  +  K  +SW AMI GYAQ+G
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185

Query: 421 RVNEALNYFCKMRSKNIKP--------------------------------DSFTMVSVI 448
           R  +A+  F KM  KN+                                  D F + S+I
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A A L+V+   K IH LVI   +E ++FV  AL+DMYAKC  V  A+ +F  M +R + 
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIV 305

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +W  +I G   HGL + A+ L+N+ML    KPN++TF+  I ACSH GLV +G ++F S+
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            KDYGI P + HY  ++DLL R+G L EA + I+ MP +P    + A+L AC  H+N  +
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLI 425

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G + A+ L  L P++   ++LL+NIYA+A+MW+ ++KVR +M    ++K PG S + L  
Sbjct: 426 GIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGK 485

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEK 747
           E   F +G T HP  + I+  LE L  E+K  GY+PDT+S+ HD+E   +E  L  HSE+
Sbjct: 486 ESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSER 545

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
           LA+A+GLL   PG  +HI KNLRVCGDCH   K+IS++  REI+VRD +R+H FK+G CS
Sbjct: 546 LAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCS 605

Query: 808 CGDYW 812
           C ++W
Sbjct: 606 CNNFW 610



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 214/446 (47%), Gaps = 36/446 (8%)

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
            Y L+ C        GK++H  +I  G          ++NMY KCG I++A  +F+++P 
Sbjct: 7   VYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH 66

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           RD +SW +I+    Q     L L +   M  ++G + D      ++ A A +G+++ GK 
Sbjct: 67  RDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQ 126

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH   + +       V ++LVDMYAKCG  +  R+VFD + S+N +SW +MI+ Y + G 
Sbjct: 127 VHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGR 186

Query: 321 PEEAMRIFQK-------------------------------MLDQGVEPTNVTIMEA-LH 348
             +A+++FQK                               M  +G++  +  I+ + + 
Sbjct: 187 KLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIG 246

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           A A+L  L  G  +H L+  L   + + ++N+L+ MY+KC  V  A  IF ++  + +VS
Sbjct: 247 ASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVS 306

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W ++I+G AQ+G   EAL+ + +M S  +KP+  T V +I A + + ++   ++    +I
Sbjct: 307 WTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMI 366

Query: 469 RSC-FEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAA 526
           +      ++   T L+D+ ++ G +  A  L   M  +    TW  ++     H      
Sbjct: 367 KDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIG 426

Query: 527 VELFNKMLE-GPTKPNDITFLCAISA 551
           + + + +L   P  P+    L  I A
Sbjct: 427 IRVADHLLSLKPEDPSTYILLSNIYA 452



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 189/387 (48%), Gaps = 37/387 (9%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG--YAKFASLD 120
           IIK+G+         L++++ K   + DA  +F  +P +    + ++L     A    L 
Sbjct: 29  IIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLT 88

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
            ++ F    + D + P  Y +  L+K C  +G +++GK++H   IV+  S D    + +V
Sbjct: 89  LSM-FPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLV 147

Query: 181 NMYAKCGQIE-------------------------------EAYKMFDRMPERDLVSWNT 209
           +MYAKCG  +                               +A ++F +MP ++L+SW  
Sbjct: 148 DMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTA 207

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRR-GDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++G  Q+G    +  L   M  +G    D   + SI+ A AN+  L +GK +H   +  
Sbjct: 208 LISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILL 267

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G++S + VS ALVDMYAKC  V  A+ +F  M  R++VSW S+I    + G  EEA+ ++
Sbjct: 268 GYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLY 327

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSK 387
            +ML  G++P  VT +  ++AC+ +G + +G  F + ++    +   +     L+ + S+
Sbjct: 328 NRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSR 387

Query: 388 CKKVDRAADIFSKLQGKT-LVSWNAMI 413
              ++ A ++   +  K    +W A++
Sbjct: 388 SGHLEEAENLIKAMPFKPDEATWAALL 414



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 2/159 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I  L+I  G          LV ++ K + +  A ++F  +  +    + +++ G A+ 
Sbjct: 258 KQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQH 317

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFA 175
              ++A+S   RM    + P    +  L+  C  VG + +G+     +I + G +  L  
Sbjct: 318 GLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQH 377

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
            T ++++ ++ G +EEA  +   MP + D  +W  +++ 
Sbjct: 378 YTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA 416


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 351/569 (61%), Gaps = 1/569 (0%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL   A  G++   KA HG  +R   +  V +   L++ Y+KCG VE AR VFDGM  R+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +VSWN+MI  Y       EA+ IF +M ++G + +  TI   L AC    D      +H 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L  +  +  ++ +  +L+ +Y+KC  +  A  +F  +Q K+ V+W++M+ GY QN    E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  + + +  +++ + FT+ SVI A + L+ +   K +HA++ +S F  NVFV ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG++  +  +F  + E+++  WN +I G+  H   K  + LF KM +    PN++T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F   +S C H+GLVEEG  +F  ++  YG+ P + HY  MVD+LGRAG L+EA++ I+ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P +P  +++G++L +C+++KN+EL E AA +LFEL+P+  G HVLL+NIYAA   W+++A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           K R ++    ++K  G S +++K++VH+F  G + HP+ + I + L+ L+ + +  GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546

Query: 725 DT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
              + +HDVE   +E LL  HSEKLA+ FGL+     S + I KNLR+C DCH   K  S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + T R IIVRD++RFH F +G CSCGD+W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 209/393 (53%), Gaps = 13/393 (3%)

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTY--------LLKVCGDVGEIRRGKEIHGQLIVNG 168
           +SL   +S L     ++V+P  Y+  +        +L++C   G +   K  HG++I   
Sbjct: 32  SSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRID 91

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
              D+  +  ++N Y+KCG +E A ++FD M ER LVSWNT++  + +N     ALD+  
Sbjct: 92  LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151

Query: 229 RMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            M  EG +    TI S+L A   N  +L   K +H  +++   D  + V TAL+D+YAKC
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKC 210

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G ++ A  VF+ M+ ++ V+W+SM+A YV+  N EEA+ ++++     +E    T+   +
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            AC++L  L  G  +H ++ +   G++V + +S + MY+KC  +  +  IFS++Q K L 
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            WN +I G+A++ R  E +  F KM+   + P+  T  S++       ++   +    L 
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL- 389

Query: 468 IRSCF--EKNVFVMTALIDMYAKCGAVGTARAL 498
           +R+ +    NV   + ++D+  + G +  A  L
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 157/289 (54%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++ + K   +  A +VF+ + ++    ++TM+  Y +     +A+   + MR +     
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            +  + +L  CG   +    K++H   +     L+L+  T ++++YAKCG I++A ++F+
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ++  V+W+++VAG+ QN   E AL L  R        +  T+ S++ A +N+ +L  
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H    ++GF S V V+++ VDMYAKCG +  + ++F  ++ +N+  WN++I+ + +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
              P+E M +F+KM   G+ P  VT    L  C   G +E G    KL+
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 151/295 (51%), Gaps = 9/295 (3%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           C +L E +++  L +K+ + D +L+  T L+ L+ K   + DA +VFE + DK    + +
Sbjct: 176 CDAL-ECKKLHCLSVKTCI-DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+ GY +  + ++A+    R +   +    +  + ++  C ++  +  GK++H  +  +G
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           F  ++F  +  V+MYAKCG + E+Y +F  + E++L  WNTI++GFA++   +  + L  
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAK 286
           +M ++G   + +T  S+L    + G +  G+      MR  +    NV   + +VD+  +
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGR 412

Query: 287 CGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            G +  A  +   +      S W S++A+     N E A    +K+ +  +EP N
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE--LEPEN 465


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/581 (41%), Positives = 344/581 (59%), Gaps = 3/581 (0%)

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN-VSTALVDMYAKCGRVETA 293
           R  DF    +   A +      IG  +H  A+R G+  +   VS A +DMY K GR++ A
Sbjct: 7   RPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLA 66

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +F  M +RNVV+WN+++   V  G P E +  +  + + G  P  V+     +ACA  
Sbjct: 67  RHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGA 126

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             L  G   H  + +     DVS+ NS++  Y KC+   +A  +F  +  +  VSW +M+
Sbjct: 127 MYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMV 186

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
             YAQNG   EA   +   R    +P  F + S +   A L  +   + +HA+ +RSC +
Sbjct: 187 AAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCID 246

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            N+FV +AL+DMY KCG V  A  +F    +R++ TWN MI GY   G  + A+ +F+ M
Sbjct: 247 ANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDM 306

Query: 534 LE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           +  G T PN IT +  I++CS  GL ++G   F ++++ +GIEP  +HY  +VDLLGRAG
Sbjct: 307 IRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAG 366

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
              +A++ IQ MP+ P I+V+GA+LGACK+H   ELG  AA +LFELDP + G HVLL+N
Sbjct: 367 MEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSN 426

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           ++A+A  W +   +R  M+  G++K PGCS V  KN VH F +  TKH     I   L  
Sbjct: 427 MFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSK 486

Query: 713 LIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
           L  +++AAGY+PDT  S++D+E+  +E+ +  HSEKLA+AFGL+   PG  I I KNLR+
Sbjct: 487 LRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRI 546

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           C DCH A K+IS + GREIIVRD +RFH FK   CSCGDYW
Sbjct: 547 CVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 3/347 (0%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           + ++ K   L  A  +F  +P++    ++ ++          + +     +R     P V
Sbjct: 54  LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 113

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
            +       C     +  G++ HG ++  GF +D+  +  +V+ Y KC    +A  +FD 
Sbjct: 114 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 173

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M  R+ VSW ++VA +AQNG  E A          G       + S L   A +  L +G
Sbjct: 174 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 233

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           +A+H  A+R+  D+ + V++ALVDMY KCG VE A  +F     RN+V+WN+MI  Y   
Sbjct: 234 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 293

Query: 319 GNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVS 376
           G+ + A+ +F  M+  G   P  +T++  + +C+  G  + G      + ++  +     
Sbjct: 294 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 353

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRV 422
               ++ +  +    ++A ++   +  +  +S W A++     +G+ 
Sbjct: 354 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKT 400



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 3/275 (1%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
            ++K G          +V  + K      A  VF+ +  +    + +M+  YA+  + ++
Sbjct: 138 FVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEE 197

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A +  +  R     P  +  +  L  C  +  +  G+ +H   + +    ++F  + +V+
Sbjct: 198 AFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVD 257

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFI 240
           MY KCG +E+A ++F   P+R+LV+WN ++ G+A  G A+ AL +   M   G    ++I
Sbjct: 258 MYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYI 317

Query: 241 TIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           T+V+++ + +  G  + G +       R G +        +VD+  + G  E A  V  G
Sbjct: 318 TLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQG 377

Query: 300 MKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD 333
           M  R  +S W +++ A    G  E      +K+ +
Sbjct: 378 MPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 412


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/632 (37%), Positives = 373/632 (59%), Gaps = 7/632 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I  G    H+  T  V+ +     ++ A ++F+ +P      Y+ +++ Y +     DA
Sbjct: 41  VITGGRVSGHILSTLSVT-YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDA 99

Query: 123 VSFLIRMRYDDV--APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           ++  IRM  + +   P  Y Y ++ K  G++  I  G  IHG+++ + F +D +    ++
Sbjct: 100 INVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALL 159

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY   G++E A  +FD M  RD++SWNT+++G+ +NG+   AL +   M  EG   D  
Sbjct: 160 AMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHA 219

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TIVS+LP   ++  L +G+ VH           + V  ALV+MY KCGR++ AR VF  M
Sbjct: 220 TIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRM 279

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           + R+V++W  MI  Y+E G+ E A+ + + M  +GV P  VTI   + AC D   L  G 
Sbjct: 280 ERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGK 339

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H    + K+ +D+ +  SLISMY+KCK +D    +FS         W+A+I G  QN 
Sbjct: 340 CLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNE 399

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            V +AL+ F +MR ++++P+  T+ S++PA A L+ +R    IH  + ++ F  ++   T
Sbjct: 400 LVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAAT 459

Query: 481 ALIDMYAKCGAVGTARALFDMMNERH----VTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            L+ +Y+KCG + +A  +F+ + E+H    V  W  +I GYG HG G  A+++F +M+  
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN+ITF  A++ACSHSGLVEEG+  F+ + + Y      +HY  +VDLLGRAGRL+E
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A++ I  +P EP  T++GA+L AC  H+NV+LGE AAN+LFEL+P+  G +VLLANIYAA
Sbjct: 580 AYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
              W  + KVR +ME  GL+K PG S +E+++
Sbjct: 640 LGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 359/643 (55%), Gaps = 49/643 (7%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN-GFAELALDLVTRM 230
           ++ A   ++  Y +CG I+ A ++F+ M  +  V+WN+I+A FA+  G  E A  L  ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            +                  N  S  I  A H + +                       V
Sbjct: 100 PQ-----------------PNTVSYNIMLACHWHHLG----------------------V 120

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
             AR  FD M  ++V SWN+MI+A  + G   EA R+F  M ++     +  +     AC
Sbjct: 121 HDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMV-SGYVAC 179

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
            DL       +   +         V    ++I+ Y K  +V+ A  +F ++  +TLV+WN
Sbjct: 180 GDLDAAVECFYAAPM-------RSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWN 232

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           AMI GY +NGR  + L  F  M    +KP++ ++ SV+   + LS ++  K +H LV + 
Sbjct: 233 AMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC 292

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
               +    T+L+ MY+KCG +  A  LF  +  + V  WN MI GY  HG GK A+ LF
Sbjct: 293 PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLF 352

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           ++M +   KP+ ITF+  + AC+H+GLV+ G+ YF ++++D+GIE   +HY  MVDLLGR
Sbjct: 353 DEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGR 412

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AG+L+EA D I+ MP +P   ++G +LGAC+IHKN+ L E AA  L ELDP     +V L
Sbjct: 413 AGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQL 472

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           AN+YAA + WD +A +R  M+   + K PG S +E+ + VH F S    HP+   I+  L
Sbjct: 473 ANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKL 532

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           + L  ++K AGYVPD   + HDV + ++E LL  HSEKLAIAFGLL    G  I + KNL
Sbjct: 533 KDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNL 592

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH+ATKYIS + GREIIVRD  RFH FK+G CSC DYW
Sbjct: 593 RVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 195/413 (47%), Gaps = 31/413 (7%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++FE IP      Y+ ML  +     + DA  F   M   DVA      + L +V G 
Sbjct: 92  ARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQV-GL 150

Query: 151 VGEIRR-------GKEIHGQLIVNGF----SLD-------------LFAMTGVVNMYAKC 186
           +GE RR          +    +V+G+     LD             +   T ++  Y K 
Sbjct: 151 MGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKF 210

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G++E A ++F  M  R LV+WN ++AG+ +NG AE  L L   M E G + + +++ S+L
Sbjct: 211 GRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVL 270

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
              +N+ +L++GK VH    +    S     T+LV MY+KCG ++ A  +F  +  ++VV
Sbjct: 271 LGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVV 330

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKL 365
            WN+MI+ Y + G  ++A+R+F +M  +G++P  +T +  L AC   G ++ G+ + + +
Sbjct: 331 CWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTM 390

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
                + T       ++ +  +  K+  A D+   +  K   +    +LG     R+++ 
Sbjct: 391 RRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGAC---RIHKN 447

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           LN   +  +KN+     T+ +    LA +   +  +W H   IR   + N  V
Sbjct: 448 LN-LAEFAAKNLLELDPTIATGYVQLANVYAAQ-NRWDHVASIRRSMKDNNVV 498



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 118/219 (53%), Gaps = 1/219 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ + K+  +  A R+F+ +  +    ++ M+ GY +    +D +     M    V 
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK 260

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P   + T +L  C ++  ++ GK++H  +     S D  A T +V+MY+KCG +++A+++
Sbjct: 261 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWEL 320

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F ++P +D+V WN +++G+AQ+G  + AL L   M +EG + D+IT V++L A  + G +
Sbjct: 321 FIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380

Query: 256 RIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETA 293
            +G        R  G ++       +VD+  + G++  A
Sbjct: 381 DLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEA 419



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)

Query: 42  PSALLLEV----CTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           P+AL L      C++L  L   +++  L+ K  L       T LVS++ K   L DA  +
Sbjct: 261 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWEL 320

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           F  IP K    ++ M+ GYA+  +   A+     M+ + + P    +  +L  C   G +
Sbjct: 321 FIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380

Query: 155 RRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
             G +    +  + G          +V++  + G++ EA  +   MP
Sbjct: 381 DLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMP 427


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/643 (38%), Positives = 369/643 (57%), Gaps = 49/643 (7%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ-NGFAELALDLVTRM 230
           D+ ++   +  + +   +E A  +F++M  R  V+WNT+++G+ +  G  + A +L  ++
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            E       I +V  L +     +L        +  +     I + +T L+  +A+ G++
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAAL-------AFFNKMPVKDIASWNT-LISGFAQNGQM 183

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + A  +F  M  +N VSW++MI+ YVE G+ E A  +++          NV +       
Sbjct: 184 QKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYK----------NVGM------- 226

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
                                   V +  ++++ Y K  KV+ A  IF ++  K LV+WN
Sbjct: 227 ----------------------KSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWN 264

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           +MI GY +N R  + L  F  M    ++P+  ++ SV+   + LS +   + +H LV +S
Sbjct: 265 SMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS 324

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
              K+    T+LI MY KCG + +A  LF  M  + V +WN MI GY  HG G+ A+ LF
Sbjct: 325 PLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLF 384

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           +KM  G  KP+ ITF+  I AC+H+G V+ G+ YF S+KK++GIE    HY  ++DLLGR
Sbjct: 385 DKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGR 444

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGRL+EA   I++MP +P   ++G +LGAC+IHKN++L E AA  L  LDP     +V L
Sbjct: 445 AGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQL 504

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           ANIYAA + WD++AKVR +M++  + K PG S +E+K+  H F S    HP+   I+  L
Sbjct: 505 ANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKL 564

Query: 711 ETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
             L  ++K AGYVPD   ++HDVE+  +E LL  HSEKLAIAFGL+ ++PG+ I + KNL
Sbjct: 565 NELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNL 624

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH A K+IS +  REIIVRD  RFH F+NG CSCGDYW
Sbjct: 625 RVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 173/356 (48%), Gaps = 14/356 (3%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A   F  +P K  A ++T++ G+A+   +  A           V P     ++   + G 
Sbjct: 155 ALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLF------SVMPEKNGVSWSAMISGY 208

Query: 151 V--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           V  G++   +E++  + +    ++   +TG    Y K G++E A ++F RM  ++LV+WN
Sbjct: 209 VEHGDLEAAEELYKNVGMKSVVVETAMLTG----YMKFGKVELAERIFQRMAVKNLVTWN 264

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++AG+ +N  AE  L +   M E   R + +++ S+L   +N+ +L +G+ +H    ++
Sbjct: 265 SMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS 324

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
                    T+L+ MY KCG +++A  +F  M  ++V+SWN+MI+ Y + G   +A+ +F
Sbjct: 325 PLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLF 384

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSK 387
            KM +  ++P  +T +  + AC   G ++ G+ +   +  +  +         +I +  +
Sbjct: 385 DKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGR 444

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
             ++D A  +  ++  K   +    +LG  +  + N  L  F      N+ P S T
Sbjct: 445 AGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHK-NLDLAEFAARNLLNLDPTSAT 499



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 117/220 (53%), Gaps = 1/220 (0%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +T +++ + K+  +  A R+F+ +  K    +++M+ GY +    +D +     M    V
Sbjct: 232 ETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV 291

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P   + + +L  C ++  +  G+++H  +  +  S D  A T +++MY KCG ++ A+K
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F  MP +D++SWN +++G+AQ+G    AL L  +M     + D+IT V+++ A  + G 
Sbjct: 352 LFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411

Query: 255 LRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           + +G +         G ++     T ++D+  + GR++ A
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEA 451



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 136/336 (40%), Gaps = 77/336 (22%)

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ-NGRVNE------ 424
            +DV   N  I+ + +   ++ A ++F K+  +T V+WN M+ GY +  G+V E      
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 425 -------------------------ALNYFCKMRSKNIKP---------------DSFTM 444
                                    AL +F KM  K+I                  +F +
Sbjct: 130 KIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDL 189

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFE-----------KNVFVMTALIDMYAKCGAVG 493
            SV+P   E + + ++  I   V     E           K+V V TA++  Y K G V 
Sbjct: 190 FSVMP---EKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVE 246

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F  M  +++ TWN MI GY  +   +  +++F  M+E   +PN ++    +  CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 554 HSGLVEEG--IHYFTS---LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           +   +  G  +H   S   L KD           +++ +  + G L+ AW    +MP + 
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKD------TTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 609 GITVFGAMLGACKIH----KNVELGEKAANRLFELD 640
            I+ + AM+     H    K + L +K  N   + D
Sbjct: 361 VIS-WNAMISGYAQHGAGRKALHLFDKMRNGTMKPD 395



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 6/176 (3%)

Query: 31  RAYIPSRIYRHPSAL--LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           +  I SR+  +P +L  +L  C++L  L   R++  L+ KS L       T L+S++CK 
Sbjct: 284 KTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC 343

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL 145
             L  A ++F  +P K    ++ M+ GYA+  +   A+    +MR   + P    +  ++
Sbjct: 344 GDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVI 403

Query: 146 KVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
             C   G +  G +    +    G        T V+++  + G+++EA  +   MP
Sbjct: 404 LACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/782 (34%), Positives = 426/782 (54%), Gaps = 36/782 (4%)

Query: 46  LLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C+S   L E + I    + +G+ +  +    +V+L+ K   + +A  VFE +P++ 
Sbjct: 133 VLTACSSAGALNEGKAIHDCAVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFERLPERN 191

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              ++ ++   A+     DA+     M  D  V P    +  ++  C ++ ++ RGK  H
Sbjct: 192 LVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTH 251

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            ++I  GF   LF    +VNMY KCG ++ A  +F++M  R++VSW  ++  +AQ GF  
Sbjct: 252 ERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIR 311

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A DL  RM  E    + +T ++++ +      L   + +H + + +GFDS   +   LV
Sbjct: 312 AAFDLYKRMDCEP---NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLV 368

Query: 282 DMYAKCGRVETARLVFDGMKSR--NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            MY KCG V++A  +F+ +K R  N V+WN+MI+   + G  ++A+  F KM  +GV P 
Sbjct: 369 TMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPN 428

Query: 340 NVTIMEALHACADLGDLERGIFVHK--LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           +VT + +L AC+ L DL RG  +H   LL+ +    + +++N++I+MY KC  +D A D 
Sbjct: 429 SVTYLASLEACSSLNDLTRGRQLHARILLENIH---EANLSNAVINMYGKCGSLDEAMDE 485

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F+K+  + +VSWN MI  YAQ+G   +AL +F +M  +    D  T +  I A   +  +
Sbjct: 486 FAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSL 545

Query: 458 RYAKWIHALVIRS--CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
              K IH++V  +  C E++  V TAL+ MYA+CG++  A+++F   + R++ TW+ +I 
Sbjct: 546 ALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIA 605

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
               HG    A++LF +M    TKP+ +TF   ++ACS  G+V++G+ YF S+ +DY I 
Sbjct: 606 ACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIP 665

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
              DH+G MVDLLGRAG L EA   ++K P      V   +LGAC +H +VE G + A  
Sbjct: 666 ASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCALAHAV---LLGACHVHGDVERGIRIAQS 722

Query: 636 LFELDPDEGGYH----VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC-SLVELKNEV 690
             ELD            +LA +Y AA  W+  A+VR  +E +  ++ PG  S +E+KN V
Sbjct: 723 ALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRV 782

Query: 691 HSFYSGSTK--HPQSKRIYTFLETLID-EIKAAGYVPDTNSIHDVEDYVQENLLSSHSEK 747
           H F     +   P+  +I   L+ L    ++  G   D N+   +       L   HSEK
Sbjct: 783 HEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICKDENARAHI-------LGCCHSEK 835

Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK-NGVC 806
           +AI FG++++  G  I I KNLR C DCH   K++S    REI VRD +  HCF+ NG C
Sbjct: 836 VAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFQTNGSC 895

Query: 807 SC 808
           SC
Sbjct: 896 SC 897



 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 209/646 (32%), Positives = 326/646 (50%), Gaps = 57/646 (8%)

Query: 20  TLHEHKHTL--SQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLF 74
           +L  H + L  S  +  P+R      A LL+ CT  K     + +   I+ SG       
Sbjct: 9   SLQTHINQLKKSSESLQPARY-----ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYI 63

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           Q  L+ ++ K   L DA  VFE +P+     +  ++  YAK   L + +    +M+ D  
Sbjct: 64  QNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGT 123

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P  + ++ +L  C   G +  GK IH   ++ G    +     +VN+Y KCG++ EA  
Sbjct: 124 KPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQVVG-NAIVNLYGKCGRVHEAKA 182

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVG 253
           +F+R+PER+LVSWN ++A  AQNG  + A+ +   M  +G  R +  T VS++ A +N+ 
Sbjct: 183 VFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLL 242

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  GK+ H   +R GFDS + V  +LV+MY KCG V+ ARLVF+ M SRNVVSW  MI 
Sbjct: 243 DLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIW 302

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY + G    A  ++++M     EP  VT M  + +C    DL R   +H  +      +
Sbjct: 303 AYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDS 359

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKT--LVSWNAMILGYAQNGRVNEALNYFCK 431
           D  +   L++MY KC  VD A  IF  L+ ++   V+WNAMI G AQ+G   +AL  F K
Sbjct: 360 DAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWK 419

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA-LVIRSCFEKNVFVMTALIDMYAKCG 490
           M  + ++P+S T ++ + A + L+ +   + +HA +++ +  E N  +  A+I+MY KCG
Sbjct: 420 MELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEAN--LSNAVINMYGKCG 477

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAI 549
           ++  A   F  M ER V +WN MI  Y  HG G+ A+E F +M LEG T  +  T+L AI
Sbjct: 478 SLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTT-DRATYLGAI 536

Query: 550 SACSH--SGLVEEGIHYFTS-----LKKDYGIEPVM-------------------DH--- 580
            AC    S  + + IH   +     L++D G+   +                    H   
Sbjct: 537 DACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRN 596

Query: 581 ---YGAMVDLLGRAGRLNEAWDFIQKMPIE---PGITVFGAMLGAC 620
              +  ++    + GR NEA D  ++M ++   P    F  ++ AC
Sbjct: 597 LVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAAC 642



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 161/487 (33%), Positives = 275/487 (56%), Gaps = 12/487 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL+ C +      GK +H  ++ +G  ++ +    ++ MYAKCG +E+A ++F+ +P
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
             ++ SW  ++  +A+ G     L L  +M  +G + D     ++L A ++ G+L  GKA
Sbjct: 89  NPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H  A+ AG ++ V V  A+V++Y KCGRV  A+ VF+ +  RN+VSWN++IAA  + G+
Sbjct: 149 IHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 321 PEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
            ++AM++F  M LD  V P + T +  + AC++L DL RG   H+ + +    + + + N
Sbjct: 208 CKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL++MY KC  VDRA  +F K+  + +VSW  MI  YAQ G +  A + + +M   + +P
Sbjct: 268 SLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEP 324

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           ++ T ++V+ +      +  A+ IHA ++ S F+ +  +   L+ MY KCG+V +A ++F
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIF 384

Query: 500 DMMNER--HVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSHSG 556
           + + ER  +  TWN MI G   HG  K A+E F KM LEG  +PN +T+L ++ ACS   
Sbjct: 385 ENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEG-VRPNSVTYLASLEACSSLN 443

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            +  G      +  +   E  + +  A++++ G+ G L+EA D   KMP E  +  +  M
Sbjct: 444 DLTRGRQLHARILLENIHEANLSN--AVINMYGKCGSLDEAMDEFAKMP-ERDVVSWNTM 500

Query: 617 LGACKIH 623
           +     H
Sbjct: 501 IATYAQH 507


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 350/592 (59%), Gaps = 38/592 (6%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR--LVFDGMKSRNVVSWNSMIAAYV 316
           K VH + +R G      V T L+ M  K      +   LVF  +   N   W +MI  Y 
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK-LGTDV 375
             G   E+   + +M   GV P + T      AC    +++ G  VH     +    +D+
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 376 SMTNSLISMYSKC------KKV-------------------------DRAADIFSKLQGK 404
            + NS+I +Y KC      +KV                         + A+ +F  L  K
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W AM+ GYAQNGR  EAL YF KM+   ++ D  T+  VI A A+L  +++A WI 
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298

Query: 465 ALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +  RS F    NV V +ALIDMY+KCG+   A  +F++M ER+V +++ MI GY  HG 
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGR 358

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
             +A++LF+ ML+   +PN +TF+  +SACSH+GLVE+G   F  ++K +G+ P  DHY 
Sbjct: 359 AHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYA 418

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGRAG L EA D ++ MP+EP   V+GA+LGAC+IH N ++ + AAN LF+L+P+
Sbjct: 419 CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPN 478

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN-EVHSFYSGSTKHP 701
             G ++LL+NIYA+A  W++++K+R ++ +KG +K PGCS  E KN E+H F++G T HP
Sbjct: 479 GIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHP 538

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +S  I   L+ LI+ +++ GY P+  S  +D+ D  +E +L SHSEKLA+A+GLL +  G
Sbjct: 539 RSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAG 598

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI I KN+R+C DCHN     S +TGREIIVRD  RFH F NG CSCG++W
Sbjct: 599 DTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 192/394 (48%), Gaps = 46/394 (11%)

Query: 12  FTNSTPTQTLHEHKHTLSQRA---YIPSRIYRHPSALL-------LEVCTSLKELRRILP 61
           F+ +  T +   H   L  R    +IP    +H   LL       L  CT   +++++  
Sbjct: 4   FSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHA 63

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSL--SDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
            II++GL       TKL+ +  K +    S    VF  +      L+  M++GYA    L
Sbjct: 64  HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLL 123

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ-LIVNGFSLDLFAMTG 178
            ++ +F  RMR D V PV + ++ L K CG    +  GK++H Q +++ GF+ DL+    
Sbjct: 124 SESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNS 183

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVS-------------------------------W 207
           ++++Y KCG +  A K+FD M ERD+VS                               W
Sbjct: 184 MIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAW 243

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
             +V G+AQNG  + AL+   +M + G   D +T+  ++ A A +G+++    +   A R
Sbjct: 244 TAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAER 303

Query: 268 AGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +GF    N  V +AL+DMY+KCG  + A  VF+ MK RNV S++SMI  Y   G    A+
Sbjct: 304 SGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSAL 363

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++F  ML   + P  VT +  L AC+  G +E+G
Sbjct: 364 QLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 201/443 (45%), Gaps = 50/443 (11%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM--FDRMPE 201
           L+ +  D     + K++H  +I NG S   + +T ++ M  K      +Y +  F ++  
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +   W  ++ G+A  G    + +  TRM  +G      T  ++  A     ++ +GK V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164

Query: 262 HGYA-MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV---- 316
           H    +  GF S + V  +++D+Y KCG +  AR VFD M  R+VVSW  +I AY     
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224

Query: 317 ---------------------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                                      + G P+EA+  FQKM D G+E   VT+   + A
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284

Query: 350 CADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           CA LG ++   ++  + ++   G   +V + ++LI MYSKC   D A  +F  ++ + + 
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           S+++MILGYA +GR + AL  F  M    I+P+  T + ++ A +   ++   + + A +
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404

Query: 468 IRSCFEKNVFVMTA------LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
                EK   V  +      ++D+  + G +  A  L   M  E +   W  ++     H
Sbjct: 405 -----EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH 459

Query: 521 GLGKAAVELFNKMLEGPTKPNDI 543
           G    A    N++ +   +PN I
Sbjct: 460 GNPDIAQIAANELFK--LEPNGI 480



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 47/320 (14%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD-----I 397
           +M  LH C     +++   VH  + +  L     +   LI M +K   VD         +
Sbjct: 45  LMSILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTK---VDVPMGSYPLLV 98

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++       W AMI GYA  G ++E+ N++ +MR   + P SFT  ++  A      +
Sbjct: 99  FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158

Query: 458 RYAKWIHA-LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT------- 509
              K +HA  ++   F  +++V  ++ID+Y KCG +G AR +FD M+ER V +       
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 510 ------------------------WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
                                   W  M+ GY  +G  K A+E F KM +   + +++T 
Sbjct: 219 YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQK 603
              ISAC+  G V+   ++   + +  G  P  +     A++D+  + G  +EA+   + 
Sbjct: 279 AGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337

Query: 604 MPIEPGITVFGAMLGACKIH 623
           M  E  +  + +M+    +H
Sbjct: 338 MK-ERNVFSYSSMILGYAMH 356



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ ++ K  S  +A +VFE + ++    Y +M+ GYA       A+     M   ++ 
Sbjct: 316 SALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIR 375

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQL---IVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           P    +  +L  C   G + +G+++  ++        S D +A   +V++  + G +EEA
Sbjct: 376 PNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC--MVDLLGRAGCLEEA 433

Query: 193 YKMFDRMP-ERDLVSWNTIVAGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSI 245
             +   MP E +   W  ++     +G    A++A + + ++   G  G++I + +I
Sbjct: 434 LDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNG-IGNYILLSNI 489


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/559 (40%), Positives = 331/559 (59%), Gaps = 1/559 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G+ +H  +++    +  +V T+L+ +YAKCG +  A+ VFD M   + V W ++I A
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y++ G+  EA+ + +     G+ P + T +  L ACA + DL  G  V +  +Q  +   
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V +  + + +Y KC ++ +A ++F K++ K  V+W AM+ GYA NG   EAL+ F  M++
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + +KPD + +   + A   L  +   +    +V    F  N  + TALIDMYAKCG+   
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  M ++ +  WN MI G G  G  K A  L  +M +   K ND TF+  + +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +GL+++G  YF ++ K Y I P ++HYG MVDLL RAG L EA   +  MP+     + G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 446

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A+LG CKIH+N EL E    +L  L+P   G +V+L+NIY+    W+  AK+R  M+ KG
Sbjct: 447 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 506

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
           ++K P CS VE + +VH F  G   HP S +IY  L+ L  E+K  GY P T  +  DVE
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           D  +E+ L  HSEKLAIAF LL + PG TI + KNLRVC DCH A K +S +T REIIVR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 626

Query: 794 DMHRFHCFKNGVCSCGDYW 812
           D +RFHCF++G CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 1/350 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H + +      +   +T ++++YAKCG +  A ++FD MP    V W  ++  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ +       G R D  T V +L A A +  L  G+ V   A + G    
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V+TA VD+Y KCG +  AR VFD M+ ++ V+W +M+  Y   G+P EA+ +F  M  
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G++P    +  AL AC  LG L+ G    +++D  +   +  +  +LI MY+KC     
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F +++ K ++ WNAMILG    G    A     +M    +K +  T + ++ +   
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             +I+   ++ H +         +     ++D+ ++ G +  A  L D M
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 436



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 7/347 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+SL+ K   L  A RVF+ +P      +  ++  Y     L +AV        + + 
Sbjct: 110 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 169

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  + ++  G+ +       G +  +F  T  V++Y KCG++ +A ++
Sbjct: 170 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 229

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M  +D V+W  +V G+A NG    ALDL   M  EG + D   +   L A   +G+L
Sbjct: 230 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 289

Query: 256 RIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +G+ A+         D+ V + TAL+DMYAKCG    A +VF  M+ ++++ WN+MI  
Sbjct: 290 DLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 348

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
               G+ + A  +  +M   GV+  + T +  L +C   G ++ G  + H +     +  
Sbjct: 349 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +     ++ + S+   +  A  +   +     +  NA+ILG    G
Sbjct: 409 RIEHYGCMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGG 451



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 12/282 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T  V L+ K   ++ A  VF+ +  K    +  M+ GYA      +A+ 
Sbjct: 200 QEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALD 259

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
             + M+ + + P  Y     L  C  +G +  G++    +  + F  +    T +++MYA
Sbjct: 260 LFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA 319

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG   EA+ +F +M ++D++ WN ++ G    G  ++A  LV +M + G + +  T + 
Sbjct: 320 KCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIG 379

Query: 245 ILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +L +  + G ++ G+   H           +     +VD+ ++ G ++ A  + D M   
Sbjct: 380 LLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP-- 437

Query: 304 NVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVEPTN 340
             +  N++I   + GG     N E A  + ++++   +EP N
Sbjct: 438 --MPANAVILGALLGGCKIHRNTELAEHVLKQLI--LLEPWN 475


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 350/585 (59%), Gaps = 38/585 (6%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R G      ++  L   YA  GR++ +  VF+     NV S++++I ++V+   
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD------ 374
            + A   + +ML  GVEP   T    L +C+    LE G  +H    +L LG+D      
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTG 181

Query: 375 --------------------------VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
                                     VS+T ++++ YSK  ++D+A  +F  ++ + +V 
Sbjct: 182 LVDVYARGGDVVCARQLFDKMPERSLVSLT-TMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WN MI GYAQ+G  NE+L  F +M      P+  T+++V+ A  +L  +   +WIH+ + 
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
               + NV V TALIDMY+KCG++  AR +FD + ++ V  WN MI GY  HG  + A++
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF +M E   KP DITF+  +SAC H GLVEEG  +F  ++  YGIEP ++HYG MV+LL
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAG L EA+  ++ M I     ++G +LG C++H N++LGE+ A  L +      G +V
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+N+YAA   W+ +AK+RT+M++ G++K  GCS +E+ N+VH F +G  KHP+SK IY 
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            L  +   +KA GY P T+ + HD+ +  +E  L  HSEKLAIAFGL+++ PG+T+ I K
Sbjct: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVC DCH   K IS +TGR+I++RD +RFH F++G+CSCGDYW
Sbjct: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 187/383 (48%), Gaps = 36/383 (9%)

Query: 44  ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           A L++   S+  L +I   +++ GL    +   KL   +     L  +  VF    +   
Sbjct: 51  ASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNV 110

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             +  ++  + +    D A  +  +M    V P  + ++ +LK C     +  GK +H Q
Sbjct: 111 FSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQ 166

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS----------------- 206
            I  G   DL+  TG+V++YA+ G +  A ++FD+MPER LVS                 
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226

Query: 207 --------------WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
                         WN ++ G+AQ+G    +L L  RM       + +T++++L A   +
Sbjct: 227 RSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQL 286

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G+L  G+ +H Y    G    V+V TAL+DMY+KCG +E ARLVFD ++ ++VV+WNSMI
Sbjct: 287 GALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMI 346

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKL 371
             Y   G  + A+++F++M + G +PT++T +  L AC   G +E G    +L+ D+  +
Sbjct: 347 VGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGI 406

Query: 372 GTDVSMTNSLISMYSKCKKVDRA 394
              +     ++++  +   ++ A
Sbjct: 407 EPKIEHYGCMVNLLGRAGHLEEA 429



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 206/450 (45%), Gaps = 39/450 (8%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           +IH  L+  G   +      +   YA  G+++ +  +F+   E ++ S++ I+    Q+ 
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             + A    ++M   G   +  T  S+L +     SL  GK +H  A++ G  S + V T
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 279 ALVDMYA-------------------------------KCGRVETARLVFDGMKSRNVVS 307
            LVD+YA                               K G ++ AR +F+GMK R+VV 
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN MI  Y + G P E++++F++ML     P  VT++  L AC  LG LE G ++H  ++
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
              +  +V +  +LI MYSKC  ++ A  +F +++ K +V+WN+MI+GYA +G    AL 
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI-RSCFEKNVFVMTALIDMY 486
            F +M     KP   T + ++ A     ++   +    L+  +   E  +     ++++ 
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 487 AKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
            + G +  A  L  +M        W  ++     H   K   E+  K L      N  T+
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEI-AKFLVDQKLANSGTY 479

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           +   +  + +G   EG+    +L K++GIE
Sbjct: 480 VLLSNMYAATG-NWEGVAKMRTLMKEHGIE 508



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 136/271 (50%), Gaps = 2/271 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ + K   L  A  +FE + ++    ++ M+ GYA+    ++++    RM      
Sbjct: 211 TTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI 270

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P       +L  CG +G +  G+ IH  +   G  +++   T +++MY+KCG +E+A  +
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDR+ ++D+V+WN+++ G+A +GF++ AL L   M E G +   IT + IL A  + G +
Sbjct: 331 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLV 390

Query: 256 RIGKAVHGYAM-RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIA 313
             G++       + G +  +     +V++  + G +E A  +   M  + + V W +++ 
Sbjct: 391 EEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG 450

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
                 N +    I + ++DQ +  +   ++
Sbjct: 451 CCRLHVNIKLGEEIAKFLVDQKLANSGTYVL 481


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/733 (35%), Positives = 393/733 (53%), Gaps = 75/733 (10%)

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
           R+F  I +    +++ M++ Y +  S   A +    M  + +    Y Y  L++ C    
Sbjct: 33  RIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRR 92

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
                K++H  ++  GF  D++    ++N ++ C  + +A ++F+     D VSWN+I+A
Sbjct: 93  SEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILA 152

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+ + G  E A  +  +M E                                       S
Sbjct: 153 GYIEIGNVEEAKHIYHQMPER--------------------------------------S 174

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           I+  S +++ ++   G V  A  +FD M  +++V+W+++IA + +    EEA+R F  M 
Sbjct: 175 II-ASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 233

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD--VSMTNSLISMYSKCKK 390
             GV    V  + AL ACA+L  +  G  +H L   LK+GT+  +++ N+LI MYSKC  
Sbjct: 234 KIGVMVDEVVAVSALSACANLLVVNMGKLIHSL--SLKIGTESYINLQNALIYMYSKCGD 291

Query: 391 -------------------------------VDRAADIFSKLQGKTLVSWNAMILGYAQN 419
                                          VD A  IF  +  K +VSW++MI GYAQN
Sbjct: 292 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 351

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              +E L  F +M+    KPD  T+VSVI A A L+ +   KW+HA + R+    NV + 
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG 411

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           T LIDMY KCG V TA  +F  M E+ ++TWN +I G   +GL ++++++F+ M +    
Sbjct: 412 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 471

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           PN+ITF+  + AC H GLV+EG H+F S+  D+ I+P + HYG MVDLLGRAG+L EA +
Sbjct: 472 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            + +MP+ P +  +GA+LGACK H + E+G +   +L EL PD  G+HVLL+NIYA+   
Sbjct: 532 LLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGK 591

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD + ++R +M K  + K PGCS++E    +H F +G   HP    I   L  +  ++K 
Sbjct: 592 WDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 651

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
            GY PD N +  DV++  +E+ L  HSEKLAIAFGL+N SP + I I KNLR+C DCH A
Sbjct: 652 EGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTA 711

Query: 779 TKYISLVTGREII 791
            K IS    R+I+
Sbjct: 712 AKLISKAFCRKIV 724



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 43/381 (11%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR-----YD 132
           ++ LF     + +A ++F+ + +K    +  ++  + +    ++A+   + M       D
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +V  V       L  C ++  +  GK IH   +  G    +     ++ MY+KCG I  A
Sbjct: 241 EVVAVS-----ALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 295

Query: 193 YKMFDRMPERDLVSWN-------------------------------TIVAGFAQNGFAE 221
            K+FD     DL+SWN                               ++++G+AQN   +
Sbjct: 296 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD 355

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
             L L   M   G + D  T+VS++ A A + +L  GK VH Y  R G    V + T L+
Sbjct: 356 ETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 415

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KCG VETA  VF GM  + + +WN++I      G  E ++ +F  M    V P  +
Sbjct: 416 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 475

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T M  L AC  +G ++ G    + ++   K+  +V     ++ +  +  K+  A ++ ++
Sbjct: 476 TFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR 535

Query: 401 L-QGKTLVSWNAMILGYAQNG 420
           +     + +W A++    ++G
Sbjct: 536 MPMTPDVATWGALLGACKKHG 556



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 136/259 (52%), Gaps = 4/259 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K N + +A  +F+ +P+K    + +M+ GYA+    D+ ++    M+     P 
Sbjct: 313 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 372

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 ++  C  +  + +GK +H  +  NG ++++   T +++MY KCG +E A ++F 
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M E+ + +WN ++ G A NG  E +LD+ + M +     + IT + +L A  ++G +  
Sbjct: 433 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 492

Query: 258 GKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
           G+  H Y+M        NV     +VD+  + G+++ A  + + M  + +V +W +++ A
Sbjct: 493 GQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 551

Query: 315 YVEGGNPEEAMRIFQKMLD 333
             + G+ E   R+ +K+++
Sbjct: 552 CKKHGDSEMGRRVGRKLIE 570


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/650 (36%), Positives = 374/650 (57%), Gaps = 21/650 (3%)

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFI 240
           MY KCG+++ A ++F  M +R++VSW  ++ GF ++G A   L L+  M        +  
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+ + L A   VG    G  +HG  +RAG+     V+++LV +Y+K GR+  AR VFDG 
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 301 K-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLE 357
                + +WN+M++ Y   G+  +A+ +F++M   +   +P   T    L AC+ LG   
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 358 RGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            G  VH  +      T  +  +  +L+ MY KC+++  A  +F +L+ K ++ W A+++G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           +AQ G+V EAL  F +      +PDS  + SV+  LA+ +++   + +H   I+     +
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
           V    +++DMY KCG    A  +F  M   +V +W  M++G G HGLG+ AV LF +M  
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
           G  +P+++T+L  +SACSH+GLV+E   YF+ +++D  + P  +HY  MVDLLGRAG L 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           EA D I+ MP+EP + V+  +L AC++HK+V +G +A + L  +D D    +V L+N+ A
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK---HPQS---KRIYTF 709
            A  W +  KVR  M ++GL+K  GCS VE+  EVH FY G  +   HPQ+   +R+   
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 710 LETLIDEIKAAGYVPDTN--SIHDVEDYVQENLLSSHSEKLAIAFGLLNS-----SPGST 762
           +ET + E    GY  D    ++HDV++  +   L +HSE+LA+   LL +       G  
Sbjct: 541 METRMRE--QLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEP 598

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I + KNLRVCGDCH   K +S V  R ++VRD +RFH F++G CSC DYW
Sbjct: 599 IRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 12/476 (2%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY-DDVAPVVY 139
           ++ K   L  A  VF  + D+    +  ++ G+ +       +  L  MR   + AP  Y
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
             +  LK C  VG+   G  IHG  +  G+       + +V +Y+K G+I +A ++FD  
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 200 P-ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLR 256
                + +WN +V+G+A  G    AL +   M  HE   + D  T  S+L A + +G+ R
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 257 IGKAVHGYAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            G  VH     +GF +  N  ++ ALVDMY KC R+  A  VF+ ++ +NV+ W +++  
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           + + G   EA+ +F++    G  P +  +   +   AD   +E+G  VH    +   GTD
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS  NS++ MY KC   D A  +F +++   +VSW  M+ G  ++G   EA+  F +MR+
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVG 493
             ++PD  T ++++ A +   ++   +   + + R             ++D+  + G + 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 494 TARALFDMMN-ERHVTTWNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDITF 545
            AR L   M  E  V  W  ++     H    +G+ A ++   M +G    N +T 
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM-DGDNPVNYVTL 475



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 5/301 (1%)

Query: 59  ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP-DKLDALYHTMLKGYAKFA 117
           I  L +++G  +  +  + LV ++ K   + DA RVF+        A ++ M+ GYA   
Sbjct: 81  IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140

Query: 118 SLDDAVSFLIRMRYDDVA--PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
              DA+     MR  +    P  + +  LLK C  +G  R G ++H  +  +GFS    A
Sbjct: 141 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 200

Query: 176 M--TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           +    +V+MY KC ++  A ++F+R+  ++++ W  +V G AQ G    AL+L  R    
Sbjct: 201 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 260

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G R D   + S++  +A+   +  G+ VH Y ++    + V+   ++VDMY KCG  + A
Sbjct: 261 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 320

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F  M++ NVVSW +M+    + G   EA+ +F++M   GVEP  VT +  L AC+  
Sbjct: 321 ERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHA 380

Query: 354 G 354
           G
Sbjct: 381 G 381


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/559 (40%), Positives = 331/559 (59%), Gaps = 1/559 (0%)

Query: 255  LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            LR G+ +H  +++    +  +V T+L+ +YAKCG +  A+ VFD M   + V W ++I A
Sbjct: 542  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601

Query: 315  YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            Y++ G+  EA+ + +     G+ P + T +  L ACA + DL  G  V +  +Q  +   
Sbjct: 602  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 661

Query: 375  VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            V +  + + +Y KC ++ +A ++F K++ K  V+W AM+ GYA NG   EAL+ F  M++
Sbjct: 662  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 721

Query: 435  KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            + +KPD + +   + A   L  +   +    +V    F  N  + TALIDMYAKCG+   
Sbjct: 722  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 781

Query: 495  ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
            A  +F  M ++ +  WN MI G G  G  K A  L  +M +   K ND TF+  + +C+H
Sbjct: 782  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 841

Query: 555  SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            +GL+++G  YF ++ K Y I P ++HYG MVDLL RAG L EA   +  MP+     + G
Sbjct: 842  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 901

Query: 615  AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            A+LG CKIH+N EL E    +L  L+P   G +V+L+NIY+    W+  AK+R  M+ KG
Sbjct: 902  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 961

Query: 675  LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
            ++K P CS VE + +VH F  G   HP S +IY  L+ L  E+K  GY P T  +  DVE
Sbjct: 962  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1021

Query: 734  DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
            D  +E+ L  HSEKLAIAF LL + PG TI + KNLRVC DCH A K +S +T REIIVR
Sbjct: 1022 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1081

Query: 794  DMHRFHCFKNGVCSCGDYW 812
            D +RFHCF++G CSC DYW
Sbjct: 1082 DNNRFHCFRDGSCSCNDYW 1100



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 1/350 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H + +      +   +T ++++YAKCG +  A ++FD MP    V W  ++  
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ +       G R D  T V +L A A +  L  G+ V   A + G    
Sbjct: 602 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 661

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V+TA VD+Y KCG +  AR VFD M+ ++ V+W +M+  Y   G+P EA+ +F  M  
Sbjct: 662 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 721

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G++P    +  AL AC  LG L+ G    +++D  +   +  +  +LI MY+KC     
Sbjct: 722 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 781

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F +++ K ++ WNAMILG    G    A     +M    +K +  T + ++ +   
Sbjct: 782 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 841

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             +I+   ++ H +         +     ++D+ ++ G +  A  L D M
Sbjct: 842 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 891



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 7/347 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+SL+ K   L  A RVF+ +P      +  ++  Y     L +AV        + + 
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 624

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  + ++  G+ +       G +  +F  T  V++Y KCG++ +A ++
Sbjct: 625 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 684

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M  +D V+W  +V G+A NG    ALDL   M  EG + D   +   L A   +G+L
Sbjct: 685 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 744

Query: 256 RIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +G+ A+         D+ V + TAL+DMYAKCG    A +VF  M+ ++++ WN+MI  
Sbjct: 745 DLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 803

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
               G+ + A  +  +M   GV+  + T +  L +C   G ++ G  + H +     +  
Sbjct: 804 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 863

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +     ++ + S+   +  A  +   +        NA+ILG    G
Sbjct: 864 RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA----NAVILGALLGG 906



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 12/282 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T  V L+ K   ++ A  VF+ +  K    +  M+ GYA      +A+ 
Sbjct: 655 QEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALD 714

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
             + M+ + + P  Y     L  C  +G +  G++    +  + F  +    T +++MYA
Sbjct: 715 LFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA 774

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG   EA+ +F +M ++D++ WN ++ G    G  ++A  LV +M + G + +  T + 
Sbjct: 775 KCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIG 834

Query: 245 ILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +L +  + G ++ G+   H           +     +VD+ ++ G ++ A  + D M   
Sbjct: 835 LLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP-- 892

Query: 304 NVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVEPTN 340
             +  N++I   + GG     N E A  + ++++   +EP N
Sbjct: 893 --MPANAVILGALLGGCKIHRNTELAEHVLKQLIL--LEPWN 930


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/704 (34%), Positives = 387/704 (54%), Gaps = 49/704 (6%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +HG     G    L +   ++ +Y K   ++ A+K+FD +  ++  +W  +++GFA+ 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 218 -GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
            G +EL   L   M  +G   +  T+ S+L   +   +++ GK +H + +R G    V +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK------ 330
             +++D+Y KC   E A   F+ M  ++VVSWN MI AY+  G+ E+++ +F+       
Sbjct: 172 ENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV 231

Query: 331 -------------------------MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
                                    M+  G E + VT   AL   + L  +E G  +H  
Sbjct: 232 VSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGR 291

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS----------------KLQGKTLVSW 409
           +    L +D  + +SL+ MY KC ++D+A+ I                  K     +VSW
Sbjct: 292 VLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           ++M+ GY  NG+  + +  F  M  + I  D  T+ ++I A A   ++ + K IHA + +
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                + +V ++LIDMY+K G++  A  +F+ + E +V  W  MI G   HG GK A+ L
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISL 471

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F  ML     PN++TF+  ++ACSH GL+EEG  YF  +K  Y I P ++HY +MV+L G
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYG 531

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG L EA +FI +  I    +V+ + L +C++HKN  +G+  +  L +  P +   ++L
Sbjct: 532 RAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYIL 591

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+N+ ++   WD+ A VR++M ++G++K PG S V+LK+++HSF  G   HPQ K IY++
Sbjct: 592 LSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSY 651

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L++LI  +K  GY  D   +  DVE+   E L+S HSEKLA+ F ++N+SP + I I KN
Sbjct: 652 LDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKN 711

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR+C DCHN  KY S +  REIIVRD HRFH FK   CSCG+YW
Sbjct: 712 LRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 256/536 (47%), Gaps = 67/536 (12%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR-MRYDDVAP 136
           L++L+ K ++L  A ++F+ I  K    +  ++ G+A+ A   + V  L R M+ D   P
Sbjct: 73  LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP 132

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC---------- 186
             Y  + +LK C     I+ GK IH  ++ NG   D+     ++++Y KC          
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192

Query: 187 ---------------------GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
                                G +E++ +MF   P +D+VSWNTI+ G  Q G+  LAL+
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
            +  M   G     +T    L  V+++  + +G+ +HG  +  G +S   + ++LV+MY 
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYG 312

Query: 286 KCGRVETARLVFDGM-----------------KSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           KCGR++ A  +   +                 K+R +VSW+SM++ YV  G  E+ M+ F
Sbjct: 313 KCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKAR-MVSWSSMVSGYVWNGKYEDGMKTF 371

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           + M+ + +     T+   + ACA+ G LE G  +H  + ++ L  D  + +SLI MYSK 
Sbjct: 372 RSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKS 431

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             +D A  IF +++   +V W +MI G A +G+  EA++ F  M +  I P+  T V V+
Sbjct: 432 GSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVL 491

Query: 449 PALAELSVI----RYAKWIHALVIRSCFEKNVFV--MTALIDMYAKCGAVGTARALFDMM 502
            A + + +I    RY +     +++  +  N  V   T+++++Y + G +  A+      
Sbjct: 492 NACSHVGLIEEGCRYFR-----MMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFEN 546

Query: 503 NERHVTT-WNVMIDGYGTH---GLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           +  H T+ W   +     H    +GK+  E+   +   P+ P+    L  + + +H
Sbjct: 547 SISHFTSVWRSFLSSCRLHKNFNMGKSVSEML--LQSAPSDPDAYILLSNMCSSNH 600



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 205/447 (45%), Gaps = 62/447 (13%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S L +  ++GS    +A+HG+  + G   I+N +  L+ +Y K   ++ A  +FD +  +
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96

Query: 304 NVVSWNSMIAAYVE-GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           N  +W  +I+ +    G+ E    +F++M   G  P   T+   L  C+   +++ G  +
Sbjct: 97  NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
           H  + +  +G DV + NS++ +Y KCK+ + A   F  +  K +VSWN MI  Y + G V
Sbjct: 157 HAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDV 216

Query: 423 NEALNYFCKMRSKNI---------------------------------KPDSFTMVSVIP 449
            ++L  F    +K++                                  P +F++  ++ 
Sbjct: 217 EKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALIL- 275

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM------- 502
            ++ LS++   + +H  V+      + ++ ++L++MY KCG +  A  +   +       
Sbjct: 276 -VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRK 334

Query: 503 ---------NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
                     +  + +W+ M+ GY  +G  +  ++ F  M+      +  T    ISAC+
Sbjct: 335 GNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACA 394

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           ++G++E G      ++K   I   +D Y   +++D+  ++G L++A    +++  EP + 
Sbjct: 395 NAGILEFGKQIHAYIQK---IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVV 450

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFE 638
           ++ +M+  C +H       K A  LFE
Sbjct: 451 LWTSMISGCALHGQ----GKEAISLFE 473



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 3/138 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I   I K GL       + L+ ++ K  SL DA  +FE I +    L+ +M+ G A  
Sbjct: 403 KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL--DLF 174
               +A+S    M    + P    +  +L  C  VG I  G   + +++ + + +  ++ 
Sbjct: 463 GQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR-YFRMMKDTYHINPEVE 521

Query: 175 AMTGVVNMYAKCGQIEEA 192
             T +VN+Y + G + EA
Sbjct: 522 HYTSMVNLYGRAGHLIEA 539


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/685 (35%), Positives = 388/685 (56%), Gaps = 4/685 (0%)

Query: 44  ALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A ++  CT L  L + L L   ++K G        T L+  + K   + +A  +F+ +  
Sbjct: 158 ASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKV 217

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  ++ GYAK    + ++    +MR  DV P  Y  + +L  C  +  +  GK+I
Sbjct: 218 KTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQI 277

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG ++  GF +D+  + G+++ Y KC +++   K+F+R+ ++D+VSW T++AG  QN F 
Sbjct: 278 HGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFH 337

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+DL   M  +G + D     S+L +  ++ +L+ G+ VH YA++   D+   V   L
Sbjct: 338 GDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGL 397

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKC  +  AR VFD + + NVVS+N+MI  Y       EA+ +F++M      PT 
Sbjct: 398 IDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTL 457

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T +  L   + L  LE    +H L+ +  +  D    ++LI +YSKC  V  A  +F +
Sbjct: 458 LTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEE 517

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  + +V WNAM  GY+Q     E+L  +  ++   +KP+ FT  +VI A + ++ +R+ 
Sbjct: 518 IYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHG 577

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           +  H  VI+   + + FV  +L+DMYAKCG++  +   F   N+R +  WN MI  Y  H
Sbjct: 578 QQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQH 637

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A+E+F +M+    KPN +TF+  +SACSH+GL++ G H+F S+ K +GIEP +DH
Sbjct: 638 GDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDH 696

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MV LLGRAG++ EA +F++KMPI+P   V+ ++L AC++  +VELG  AA      D
Sbjct: 697 YACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCD 756

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P + G ++LL+NI+A+  MW  +  VR  M+   + K PG S +E+ NEVH F +  T H
Sbjct: 757 PADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAH 816

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPD 725
             S  I   L+ LI +IK  GYVP+
Sbjct: 817 RDSTLISLVLDNLILQIKGFGYVPN 841



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 279/521 (53%), Gaps = 2/521 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR-MRYDDVAP 136
           L+  + K N  SDA ++F+ +P +    + +M+  Y +     +A+    R MR     P
Sbjct: 93  LLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKP 152

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             Y    +++ C  +G + +  ++HG ++  GF  D++  T +++ YAK G ++EA  +F
Sbjct: 153 NEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIF 212

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D +  +  V+W  I+AG+A+ G +E++L L  +M E     D   I S+L A + +  L 
Sbjct: 213 DGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLE 272

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            GK +HGY +R GFD  V+V   ++D Y KC +V+T R +F+ +  ++VVSW +MIA  +
Sbjct: 273 GGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCM 332

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           +     +AM +F +M+ +G +P        L++C  L  L++G  VH    ++ +  D  
Sbjct: 333 QNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDF 392

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N LI MY+KC  +  A  +F  +    +VS+NAMI GY++  ++ EAL+ F +MR   
Sbjct: 393 VKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSL 452

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
             P   T VS++   + L ++  +  IH L+I+     + F  +ALID+Y+KC  VG AR
Sbjct: 453 SPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDAR 512

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +F+ + +R +  WN M  GY      + +++L+  +     KPN+ TF   I+A S+  
Sbjct: 513 LVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIA 572

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +  G  +   + K  G++       ++VD+  + G + E+
Sbjct: 573 SLRHGQQFHNQVIK-MGLDDDPFVTNSLVDMYAKCGSIEES 612



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 222/391 (56%), Gaps = 2/391 (0%)

Query: 158 KEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           K+IH  ++V GF   D+F +  +++ Y+K     +A K+FD MP R+LV+W+++V+ + Q
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 217 NGFAELALDLVTR-MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           +G++  AL L  R M     + +   + S++ A   +G+L     +HG+ ++ GF   V 
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V T+L+D YAK G V+ ARL+FDG+K +  V+W ++IA Y + G  E ++++F +M +  
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           V P    I   L AC+ L  LE G  +H  + +     DVS+ N +I  Y KC KV    
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F++L  K +VSW  MI G  QN    +A++ F +M  K  KPD+F   SV+ +   L 
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            ++  + +HA  I+   + + FV   LIDMYAKC ++  AR +FD++   +V ++N MI+
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           GY        A++LF +M    + P  +TF+
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 12/216 (5%)

Query: 459 YAKWIHA-LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
           Y K IHA +V+    + +VF++  L+  Y+K      A+ LFD M  R++ TW+ M+  Y
Sbjct: 69  YYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMY 128

Query: 518 GTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
             HG    A+ LF + +   + KPN+      + AC+  G + + +     + K   ++ 
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQD 188

Query: 577 VMDHYG-AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           V  + G +++D   + G ++EA      + ++  +T    + G  K+ ++ E+  K  N+
Sbjct: 189 V--YVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRS-EVSLKLFNQ 245

Query: 636 LFELD--PDEGGYHVLLANIYAAASMWDKLAKVRTI 669
           + E D  PD      +++++ +A SM + L   + I
Sbjct: 246 MREGDVYPDR----YVISSVLSACSMLEFLEGGKQI 277


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/643 (38%), Positives = 381/643 (59%), Gaps = 18/643 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +  +  G+V+ Y   G I EA ++FDRMPER++VSW  +V G+ + G    A  L  +M 
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E+    + ++   +L  +   G  RI +A   + M    D +    T ++  Y + GR+ 
Sbjct: 219 EK----NVVSWTVMLGGLLQEG--RIDEACRLFDMMPEKDVVTR--TNMIGGYCQVGRLV 270

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR++FD M  RNVVSW +MI  YV+    + A ++F+ M     E   V+    L    
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYT 326

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           + G L+      +L + + + + V+  N++I  + +  +V +A  +F +++ K   +W+A
Sbjct: 327 NCGRLDEA---SELFNAMPIKSVVA-CNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  Y + G   +AL  F  M+ + I+P+  +++SV+   A L+ + + + IHA ++RS 
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +V+V + L+ MY KCG +  A+ +FD    + V  WN +I GY  HGLG  A+ +F+
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
            M      P+D+TF+  +SACS++G V++G+  F S++  Y +E  ++HY  MVDLLGRA
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G+LNEA D I+KMP+E    ++GA+LGAC+ H  ++L E AA +L  L+P   G  +LL+
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLS 622

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG-STKHPQSKRIYTFL 710
           NIYA+   WD +A++R  M  + + K PGCS + ++ +VH F  G S+ HP+   I   L
Sbjct: 623 NIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRIL 682

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E L   ++ AGY PD + + HDV++  +   L  HSEKLA+A+GLL    G  I + KNL
Sbjct: 683 EWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNL 742

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH A K I+ VTGREII+RD +RFH FK+G CSC DYW
Sbjct: 743 RVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 213/445 (47%), Gaps = 18/445 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS +     +++A  VF+ +P++    +  M++GY K   + +A +   +M   +V   
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV-- 223

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L      G I     +   +       D+   T ++  Y + G++ EA  +FD
Sbjct: 224 --SWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEARMLFD 277

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP R++VSW T++ G+ QN   ++A  L   M E+      ++  ++L    N G L  
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE----VSWTAMLKGYTNCGRLDE 333

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
              +   AM     S+V    A++  + + G V  AR VFD M+ ++  +W++MI  Y  
Sbjct: 334 ASELFN-AM--PIKSVV-ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   +A+ +F+ M  +G+ P   +++  L  CA L +L+ G  +H  L + +   DV +
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + L+SMY KC  + +A  +F +   K +V WN++I GYAQ+G   EAL  F  M    I
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            PD  T V V+ A +    ++    I +++  +   E+ +     ++D+  + G +  A 
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTH 520
            L + M  E     W  ++    TH
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTH 594



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 180/342 (52%), Gaps = 12/342 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDD 133
           +T ++  +C+   L +A  +F+ +P +    + TM+ GY +   +D A   F +    ++
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE 315

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V+     +T +LK   + G +    E+   + +      + A   ++  + + G++ +A 
Sbjct: 316 VS-----WTAMLKGYTNCGRLDEASELFNAMPIKS----VVACNAMILCFGQNGEVPKAR 366

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD+M E+D  +W+ ++  + + G    AL+L   M  EG R +F +++S+L   A + 
Sbjct: 367 QVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLA 426

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  G+ +H   +R+ FD  V V++ L+ MY KCG +  A+ VFD    ++VV WNS+I 
Sbjct: 427 NLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIIT 486

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLG 372
            Y + G   EA+R+F  M   G+ P +VT +  L AC+  G++++G+ +   ++ + ++ 
Sbjct: 487 GYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVE 546

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
             +     ++ +  +  K++ A D+  K+  +   + W A++
Sbjct: 547 QKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 186/407 (45%), Gaps = 42/407 (10%)

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +L+  Y++ G++E AR+VFD M+ +N++SWNS++A Y +   P+EA  +F KM ++   
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 338 PTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
             N  +          G +  G+     ++ D++     VS T +++  Y K   +  A 
Sbjct: 162 SWNGLVS---------GYINNGMINEAREVFDRMPERNVVSWT-AMVRGYVKEGMISEAE 211

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F ++  K +VSW  M+ G  Q GR++EA   F  M  K    D  T  ++I    ++ 
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQVG 267

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  A+ +   + R    +NV   T +I  Y +   V  AR LF++M E++  +W  M+ 
Sbjct: 268 RLVEARMLFDEMPR----RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLK 323

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK-KDYGI 574
           GY   G    A ELFN M        +   LC       +G V +    F  ++ KD G 
Sbjct: 324 GYTNCGRLDEASELFNAMPIKSVVACNAMILCF----GQNGEVPKARQVFDQMREKDEGT 379

Query: 575 EPVMDHYGAMVDLLGRAG-RLN--EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
                 + AM+ +  R G  L+  E +  +Q+  I P      ++L  C    N++ G +
Sbjct: 380 ------WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 632 AANRLF--ELDPDEGGYHVLLA------NIYAAASMWDKLAKVRTIM 670
              +L   + D D     VLL+      N+  A  ++D+ A    +M
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 154/339 (45%), Gaps = 34/339 (10%)

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           +F   +L++      +   NSLI+ YS+  ++++A  +F +++ K ++SWN+++ GY QN
Sbjct: 83  MFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN 142

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R  EA N F KM  +N    + +   ++       +I  A+     V     E+NV   
Sbjct: 143 KRPQEAQNMFDKMSERN----TISWNGLVSGYINNGMINEAR----EVFDRMPERNVVSW 194

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-- 537
           TA++  Y K G +  A  LF  M E++V +W VM+ G    G    A  LF+ M E    
Sbjct: 195 TAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254

Query: 538 TKPNDITFLCAISACSHSGLV-----EEGIHYFTSL-------------KKDYGIEPVMD 579
           T+ N I   C +     + ++        +  +T++             +K + + P  +
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN 314

Query: 580 H--YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
              + AM+      GRL+EA +    MPI+  +    AM+     +  V    +  +++ 
Sbjct: 315 EVSWTAMLKGYTNCGRLDEASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           E   DEG +  ++  +Y    +     ++  +M+++G++
Sbjct: 374 E--KDEGTWSAMI-KVYERKGLELDALELFRMMQREGIR 409


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 350/592 (59%), Gaps = 38/592 (6%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR--LVFDGMKSRNVVSWNSMIAAYV 316
           K VH + +R G      V T L+ M  K      +   LVF  +   N   W +MI  Y 
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK-LGTDV 375
             G   E+   + +M   GV P + T      AC    +++ G  VH     +    +D+
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 376 SMTNSLISMYSKC------KKV-------------------------DRAADIFSKLQGK 404
            + NS+I +Y KC      +KV                         + A+ +F  L  K
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W AM+ GYAQNGR  EAL YF KM+   ++ D  T+  VI A A+L  +++A WI 
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298

Query: 465 ALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            +  RS F    NV V +ALIDMY+KCG+   A  +F++M ER+V +++ MI GY  HG 
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGR 358

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
             +A++LF+ ML+   +PN +TF+  +SACSH+GLVE+G   F  ++K +G+ P  DHY 
Sbjct: 359 AHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYA 418

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDLLGRAG L EA D ++ MP+EP   V+GA+LGAC+IH N ++ + AAN LF+L+P+
Sbjct: 419 CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPN 478

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN-EVHSFYSGSTKHP 701
             G ++LL+NIYA+A  W++++K+R ++ +KG +K PGCS  E KN E+H F++G T HP
Sbjct: 479 GIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHP 538

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           +S  I   L+ LI+ +++ GY P+  S  +D+ D  +E +L SHSEKLA+A+GLL +  G
Sbjct: 539 RSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAG 598

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI I KN+R+C DCHN     S +TGREIIVRD  RFH F NG CSCG++W
Sbjct: 599 DTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 192/394 (48%), Gaps = 46/394 (11%)

Query: 12  FTNSTPTQTLHEHKHTLSQRA---YIPSRIYRHPSALL-------LEVCTSLKELRRILP 61
           F+ +  T +   H   L  R    +IP    +H   LL       L  CT   +++++  
Sbjct: 4   FSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHA 63

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSL--SDAARVFEPIPDKLDALYHTMLKGYAKFASL 119
            II++GL       TKL+ +  K +    S    VF  +      L+  M++GYA    L
Sbjct: 64  HIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLL 123

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ-LIVNGFSLDLFAMTG 178
            ++ +F  RMR D V PV + ++ L K CG    +  GK++H Q +++ GF+ DL+    
Sbjct: 124 SESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNS 183

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVS-------------------------------W 207
           ++++Y KCG +  A K+FD M ERD+VS                               W
Sbjct: 184 MIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAW 243

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
             +V G+AQNG  + AL+   +M + G   D +T+  ++ A A +G+++    +   A R
Sbjct: 244 TAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAER 303

Query: 268 AGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +GF    N  V +AL+DMY+KCG  + A  VF+ MK RNV S++SMI  Y   G    A+
Sbjct: 304 SGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSAL 363

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++F  ML   + P  VT +  L AC+  G +E+G
Sbjct: 364 QLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 201/443 (45%), Gaps = 50/443 (11%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM--FDRMPE 201
           L+ +  D     + K++H  +I NG S   + +T ++ M  K      +Y +  F ++  
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +   W  ++ G+A  G    + +  TRM  +G      T  ++  A     ++ +GK V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164

Query: 262 HGYA-MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV---- 316
           H    +  GF S + V  +++D+Y KCG +  AR VFD M  R+VVSW  +I AY     
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224

Query: 317 ---------------------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
                                      + G P+EA+  FQKM D G+E   VT+   + A
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284

Query: 350 CADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
           CA LG ++   ++  + ++   G   +V + ++LI MYSKC   D A  +F  ++ + + 
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           S+++MILGYA +GR + AL  F  M    I+P+  T + ++ A +   ++   + + A +
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404

Query: 468 IRSCFEKNVFVMTA------LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
                EK   V  +      ++D+  + G +  A  L   M  E +   W  ++     H
Sbjct: 405 -----EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH 459

Query: 521 GLGKAAVELFNKMLEGPTKPNDI 543
           G    A    N++ +   +PN I
Sbjct: 460 GNPDIAQIAANELFK--LEPNGI 480



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 47/320 (14%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD-----I 397
           +M  LH C     +++   VH  + +  L     +   LI M +K   VD         +
Sbjct: 45  LMSILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTK---VDVPMGSYPLLV 98

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++       W AMI GYA  G ++E+ N++ +MR   + P SFT  ++  A      +
Sbjct: 99  FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158

Query: 458 RYAKWIHA-LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT------- 509
              K +HA  ++   F  +++V  ++ID+Y KCG +G AR +FD M+ER V +       
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 510 ------------------------WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
                                   W  M+ GY  +G  K A+E F KM +   + +++T 
Sbjct: 219 YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQK 603
              ISAC+  G V+   ++   + +  G  P  +     A++D+  + G  +EA+   + 
Sbjct: 279 AGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337

Query: 604 MPIEPGITVFGAMLGACKIH 623
           M  E  +  + +M+    +H
Sbjct: 338 MK-ERNVFSYSSMILGYAMH 356



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + L+ ++ K  S  +A +VFE + ++    Y +M+ GYA       A+     M   ++ 
Sbjct: 316 SALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIR 375

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQL---IVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           P    +  +L  C   G + +G+++  ++        S D +A   +V++  + G +EEA
Sbjct: 376 PNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC--MVDLLGRAGCLEEA 433

Query: 193 YKMFDRMP-ERDLVSWNTIVAGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSI 245
             +   MP E +   W  ++     +G    A++A + + ++   G  G++I + +I
Sbjct: 434 LDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNG-IGNYILLSNI 489


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/803 (31%), Positives = 423/803 (52%), Gaps = 81/803 (10%)

Query: 56  LRRILPLIIKSGLCDQHL--FQTKLVS----LFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           + R L L I  GL  + L    T++VS     + +  SL  A ++F+ +P + D  ++ +
Sbjct: 1   MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +    +  + + AV     M++            LL+VC +      G++IHG ++  G 
Sbjct: 61  VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER--------------------------- 202
             ++     ++ MY++ G++E + K+F+ M +R                           
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180

Query: 203 --------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
                   D+V+WN++++G+A  G ++ A+ ++ RM   G +    +I S+L AVA  G 
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L++GKA+HGY +R      V V T L+DMY K G +  AR+VFD M ++N+V+WNS+++ 
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
                  ++A  +  +M  +G++P  +T                                
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAIT-------------------------------- 328

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGK----TLVSWNAMILGYAQNGRVNEALNYFC 430
               NSL S Y+   K ++A D+  K++ K     +VSW A+  G ++NG    AL  F 
Sbjct: 329 ---WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           KM+ + + P++ TM +++  L  LS++   K +H   +R     + +V TAL+DMY K G
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            + +A  +F  +  + + +WN M+ GY   G G+  +  F+ MLE   +P+ ITF   +S
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
            C +SGLV+EG  YF  ++  YGI P ++H   MVDLLGR+G L+EAWDFIQ M ++P  
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
           T++GA L +CKIH+++EL E A  RL  L+P     ++++ N+Y+  + W+ + ++R +M
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH 730
               ++     S +++   VH FY+    HP    IY  L  L+ E+K +GYVPDT+ IH
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIH 685

Query: 731 -DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
            D+ D  +E LL  H+EKLA+ +GL+     + I + KN  +C D H   KY+S++  RE
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           I++++  R H F++G CSC D W
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDSW 768



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 225/530 (42%), Gaps = 81/530 (15%)

Query: 36  SRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
           ++ Y      LL+VC++     E R+I   +++ GL         L+ ++ +   L  + 
Sbjct: 85  AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF--------------------------- 125
           +VF  + D+  + ++++L  Y K   +DDA+                             
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204

Query: 126 --------LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
                   L RM+   + P   + + LL+   + G ++ GK IHG ++ N    D++  T
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++MY K G +  A  +FD M  +++V+WN++V+G +     + A  L+ RM +EG + 
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D IT                                     +L   YA  G+ E A  V 
Sbjct: 325 DAITW-----------------------------------NSLASGYATLGKPEKALDVI 349

Query: 298 DGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             MK +    NVVSW ++ +   + GN   A+++F KM ++GV P   T+   L     L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             L  G  VH    +  L  D  +  +L+ MY K   +  A +IF  ++ K+L SWN M+
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           +GYA  GR  E +  F  M    ++PD+ T  SV+       +++   W +  ++RS + 
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG-WKYFDLMRSRYG 528

Query: 474 --KNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH 520
               +   + ++D+  + G +  A      M+ +   T W   +     H
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/632 (37%), Positives = 373/632 (59%), Gaps = 7/632 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I  G    H+  T  V+ +     ++ A ++FE +P      Y+ +++ Y +     DA
Sbjct: 41  VITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDA 99

Query: 123 VSFLIRMRYDDV--APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +S  IRM  + V   P  Y Y ++ K  G++  ++ G  +HG+++ + F  D +    ++
Sbjct: 100 ISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALL 159

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY   G++E A  +FD M  RD++SWNT+++G+ +NG+   AL +   M  E    D  
Sbjct: 160 AMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHA 219

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           TIVS+LP   ++  L +G+ VH           + V  ALV+MY KCGR++ AR VFD M
Sbjct: 220 TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           + R+V++W  MI  Y E G+ E A+ + + M  +GV P  VTI   +  C D   +  G 
Sbjct: 280 ERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H    + ++ +D+ +  SLISMY+KCK+VD    +FS         W+A+I G  QN 
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            V++AL  F +MR ++++P+  T+ S++PA A L+ +R A  IH  + ++ F  ++   T
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459

Query: 481 ALIDMYAKCGAVGTARALFDMMNERH----VTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            L+ +Y+KCG + +A  +F+ + E+H    V  W  +I GYG HG G  A+++F +M+  
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
              PN+ITF  A++ACSHSGLVEEG+  F  + + Y      +HY  +VDLLGRAGRL+E
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A++ I  +P EP  TV+GA+L AC  H+NV+LGE AAN+LFEL+P+  G +VLLANIYAA
Sbjct: 580 AYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
              W  + KVR++ME  GL+K PG S +E+++
Sbjct: 640 LGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 198/377 (52%), Gaps = 9/377 (2%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L VC  LK+L   R +  L+ +  L D+   +  LV+++ K   + +A  VF+ +  + 
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ GY +   +++A+     M+++ V P       L+ VCGD  ++  GK +HG
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +      D+   T +++MYAKC +++  +++F    +     W+ I+AG  QN     
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSD 403

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L  RM  E    +  T+ S+LPA A +  LR    +H Y  + GF S ++ +T LV 
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463

Query: 283 MYAKCGRVETARLVFDGM----KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +Y+KCG +E+A  +F+G+    KS++VV W ++I+ Y   G+   A+++F +M+  GV P
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP 523

Query: 339 TNVTIMEALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +T   AL+AC+  G +E G+ + + +L+  K     +    ++ +  +  ++D A ++
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583

Query: 398 FSKLQGK-TLVSWNAMI 413
            + +  + T   W A++
Sbjct: 584 ITTIPFEPTSTVWGALL 600


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/559 (40%), Positives = 331/559 (59%), Gaps = 1/559 (0%)

Query: 255  LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            LR G+ +H  +++    +  +V T+L+ +YAKCG +  A+ VFD M   + V W ++I A
Sbjct: 566  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 315  YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
            Y++ G+  EA+ + +     G+ P + T +  L ACA + DL  G  V +  +Q  +   
Sbjct: 626  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 685

Query: 375  VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
            V +  + + +Y KC ++ +A ++F K++ K  V+W AM+ GYA NG   EAL+ F  M++
Sbjct: 686  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 745

Query: 435  KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            + +KPD + +   + A   L  +   +    +V    F  N  + TALIDMYAKCG+   
Sbjct: 746  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 805

Query: 495  ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
            A  +F  M ++ +  WN MI G G  G  K A  L  +M +   K ND TF+  + +C+H
Sbjct: 806  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 865

Query: 555  SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            +GL+++G  YF ++ K Y I P ++HYG MVDLL RAG L EA   +  MP+     + G
Sbjct: 866  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 925

Query: 615  AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            A+LG CKIH+N EL E    +L  L+P   G +V+L+NIY+    W+  AK+R  M+ KG
Sbjct: 926  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 985

Query: 675  LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
            ++K P CS VE + +VH F  G   HP S +IY  L+ L  E+K  GY P T  +  DVE
Sbjct: 986  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1045

Query: 734  DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
            D  +E+ L  HSEKLAIAF LL + PG TI + KNLRVC DCH A K +S +T REIIVR
Sbjct: 1046 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1105

Query: 794  DMHRFHCFKNGVCSCGDYW 812
            D +RFHCF++G CSC DYW
Sbjct: 1106 DNNRFHCFRDGSCSCNDYW 1124



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 1/350 (0%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R G+++H + +      +   +T ++++YAKCG +  A ++FD MP    V W  ++  
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           +   G    A+ +       G R D  T V +L A A +  L  G+ V   A + G    
Sbjct: 626 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 685

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V+TA VD+Y KCG +  AR VFD M+ ++ V+W +M+  Y   G+P EA+ +F  M  
Sbjct: 686 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 745

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G++P    +  AL AC  LG L+ G    +++D  +   +  +  +LI MY+KC     
Sbjct: 746 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 805

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F +++ K ++ WNAMILG    G    A     +M    +K +  T + ++ +   
Sbjct: 806 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 865

Query: 454 LSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             +I+   ++ H +         +     ++D+ ++ G +  A  L D M
Sbjct: 866 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM 915



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 7/347 (2%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+SL+ K   L  A RVF+ +P      +  ++  Y     L +AV        + + 
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 648

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  + ++  G+ +       G +  +F  T  V++Y KCG++ +A ++
Sbjct: 649 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 708

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD+M  +D V+W  +V G+A NG    ALDL   M  EG + D   +   L A   +G+L
Sbjct: 709 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 768

Query: 256 RIGK-AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
            +G+ A+         D+ V + TAL+DMYAKCG    A +VF  M+ ++++ WN+MI  
Sbjct: 769 DLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 827

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
               G+ + A  +  +M   GV+  + T +  L +C   G ++ G  + H +     +  
Sbjct: 828 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 887

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +     ++ + S+   +  A  +   +        NA+ILG    G
Sbjct: 888 RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA----NAVILGALLGG 930



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 12/282 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           + G+       T  V L+ K   ++ A  VF+ +  K    +  M+ GYA      +A+ 
Sbjct: 679 QEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALD 738

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
             + M+ + + P  Y     L  C  +G +  G++    +  + F  +    T +++MYA
Sbjct: 739 LFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYA 798

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG   EA+ +F +M ++D++ WN ++ G    G  ++A  LV +M + G + +  T + 
Sbjct: 799 KCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIG 858

Query: 245 ILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +L +  + G ++ G+   H           +     +VD+ ++ G ++ A  + D M   
Sbjct: 859 LLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP-- 916

Query: 304 NVVSWNSMIAAYVEGG-----NPEEAMRIFQKMLDQGVEPTN 340
             +  N++I   + GG     N E A  + ++++   +EP N
Sbjct: 917 --MPANAVILGALLGGCKIHRNTELAEHVLKQLIL--LEPWN 954


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 288/972 (29%), Positives = 471/972 (48%), Gaps = 171/972 (17%)

Query: 10   SVFTNSTPTQTLHEHKHTLSQR--------AYIPSRIYRHPSAL-----LLEVCTSLKEL 56
            S F  STP     +H  T+S          +++ +     P+ +     LL  C++L E 
Sbjct: 40   SKFRVSTPRIIGFKHYSTVSNHIHPQTLLPSFVDTLTNSSPTEISDSISLLNRCSTLSEF 99

Query: 57   RRILPLIIK-SGLCDQHLFQTKLVSLFCKYN-SLSDAARVFEPIPDKLDALYHTMLKGYA 114
            R+I   ++K + L  +     KLV L+CK   SL DA ++ + IP++    Y  +++ Y 
Sbjct: 100  RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159

Query: 115  KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV--------------------------- 147
            +    D+  S    M Y+ + P  Y    +LK                            
Sbjct: 160  RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVF 219

Query: 148  -----------CGDVGEIR----------------------------RGKEIHGQLIVNG 168
                       CGD+G  R                              K I   + ++G
Sbjct: 220  VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDG 279

Query: 169  FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLV----SWNTIVAGFAQNGFAELAL 224
               DL + + +++ +A+ G+I+ A +  + MPER L     SWN I++G  QNG+ E AL
Sbjct: 280  VKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDAL 339

Query: 225  DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG--------------- 269
            D+ +RM       + ITI SILPA   + +LR+GKA+H  A + G               
Sbjct: 340  DMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMY 399

Query: 270  ------------FDSIVNVSTAL----VDMYAKCGRVETARLVF---------------- 297
                        F    N +TA+    +  Y   G+VE A  +                 
Sbjct: 400  SKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYN 459

Query: 298  --------DGMKSR---------------NVVSWNSMIAAYVEGGNPEEAMRIFQKM--- 331
                    +G+K++               NVVS+N +I+ + + G   EA+++F+ M   
Sbjct: 460  TILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSP 519

Query: 332  ---------LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
                     L+  + P  +TI  AL ACADL    +G  +H    +     ++ ++++L+
Sbjct: 520  SDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALV 579

Query: 383  SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
             MY+KC  +D A  +F ++ G+  VSWNA++ GY  N +  EAL  F +M  + ++P S 
Sbjct: 580  DMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSI 639

Query: 443  TMVSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKCGAVGTARALFD 500
            T + + PA  +++ IR+ + +H    +   +  KN  + +ALIDMYAKCG++  A+++FD
Sbjct: 640  TFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IXSALIDMYAKCGSILDAKSVFD 698

Query: 501  MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
               E+ V  WN MI  +  HG+ + A  +F +M      P+ ITF+  +SAC+  GLVEE
Sbjct: 699  SEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEE 758

Query: 561  GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
            G  YF S++  YG+   ++HY  MV +LG AG L+EA DFI++MP  P   ++  +L AC
Sbjct: 759  GWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQAC 818

Query: 621  KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            ++H N E+GE+AA  LFEL+PD    ++LL+NIY ++ MWD    +R+ M  + L     
Sbjct: 819  RVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKE 878

Query: 681  CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENL 740
            CS + + +   +F  G + HP+ + I    + L  +++ +GY P  + + D E+   +  
Sbjct: 879  CSYLTVGSHXCTFKGGESSHPELEEILETWDXLARKMELSGYFP-LDPVFDDEEKELDPF 937

Query: 741  LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
               H+EKLAI FG+++S+    +H+ KN+R+C DCH + K IS + GREI V+D+  +H 
Sbjct: 938  SCLHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHH 997

Query: 801  FKNGVCSCGDYW 812
             K+G+C C D W
Sbjct: 998  MKDGICXCQDRW 1009



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 244/524 (46%), Gaps = 55/524 (10%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV-------SFLIRMRYDDVAPV-VY 139
           LS   R F P+P     +    + G+  ++++ + +       SF+  +   + +P  + 
Sbjct: 27  LSPHNRNFFPLPKSKFRVSTPRIIGFKHYSTVSNHIHPQTLLPSFVDTLT--NSSPTEIS 84

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCG-QIEEAYKMFD 197
           +   LL  C  + E R   +IH +++ +N           +V +Y K    +E+A K+ D
Sbjct: 85  DSISLLNRCSTLSEFR---QIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLD 141

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +P R + ++  ++  + ++   +        M  EG   D   + +IL A + +   RI
Sbjct: 142 EIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRI 201

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK VHG+ +R   +S V V  AL+  Y+ CG + ++R VF  M+ R+VVSW ++I+AY+E
Sbjct: 202 GKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYME 261

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  +EA  IF  M   GV+P                                   D+  
Sbjct: 262 EGLXDEAKHIFHLMQLDGVKP-----------------------------------DLIS 286

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGK----TLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            ++L+S +++  ++D A +   ++  +    T+ SWN +I G  QNG + +AL+ F +M 
Sbjct: 287 WSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRML 346

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
                P+  T+ S++PA   L  +R  K IH +  +     NV+V  ++IDMY+KCG+  
Sbjct: 347 WYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYD 406

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F     ++   WN MI  Y   G  + A+ L   M +   KP+ IT+   +S  +
Sbjct: 407 YAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHA 466

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            +GL  +     + + +  G++P +  +  ++    ++G   EA
Sbjct: 467 RNGLKTQAXELLSEMVQ-MGLKPNVVSFNVLISGFQQSGLSYEA 509


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/643 (38%), Positives = 381/643 (59%), Gaps = 18/643 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +  +  G+V+ Y   G I EA ++FDRMPER++VSW  +V G+ + G    A  L  +M 
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E+    + ++   +L  +   G  RI +A   + M    D +    T ++  Y + GR+ 
Sbjct: 219 EK----NVVSWTVMLGGLLQEG--RIDEACRLFDMMPEKDVVTR--TNMIGGYCQVGRLV 270

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR++FD M  RNVVSW +MI  YV+    + A ++F+ M     E   V+    L    
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYT 326

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
           + G L+      +L + + + + V+  N++I  + +  +V +A  +F +++ K   +W+A
Sbjct: 327 NCGRLDEA---SELFNAMPIKSVVA-CNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  Y + G   +AL  F  M+ + I+P+  +++SV+   A L+ + + + IHA ++RS 
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +V+V + L+ MY KCG +  A+ +FD    + V  WN +I GY  HGLG  A+ +F+
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
            M      P+D+TF+  +SACS++G V++G+  F S++  Y +E  ++HY  MVDLLGRA
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G+LNEA D I+KMP+E    ++GA+LGAC+ H  ++L E AA +L  L+P   G  +LL+
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLS 622

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG-STKHPQSKRIYTFL 710
           NIYA+   WD +A++R  M  + + K PGCS + ++ +VH F  G S+ HP+   I   L
Sbjct: 623 NIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRIL 682

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E L   ++ AGY PD + + HDV++  +   L  HSEKLA+A+GLL    G  I + KNL
Sbjct: 683 EWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNL 742

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH A K I+ VTGREII+RD +RFH FK+G CSC DYW
Sbjct: 743 RVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 213/445 (47%), Gaps = 18/445 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS +     +++A  VF+ +P++    +  M++GY K   + +A +   +M   +V   
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV-- 223

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L      G I     +   +       D+   T ++  Y + G++ EA  +FD
Sbjct: 224 --SWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEARMLFD 277

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP R++VSW T++ G+ QN   ++A  L   M E+      ++  ++L    N G L  
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE----VSWTAMLKGYTNCGRLDE 333

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
              +   AM     S+V    A++  + + G V  AR VFD M+ ++  +W++MI  Y  
Sbjct: 334 ASELFN-AM--PIKSVV-ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   +A+ +F+ M  +G+ P   +++  L  CA L +L+ G  +H  L + +   DV +
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + L+SMY KC  + +A  +F +   K +V WN++I GYAQ+G   EAL  F  M    I
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            PD  T V V+ A +    ++    I +++  +   E+ +     ++D+  + G +  A 
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTH 520
            L + M  E     W  ++    TH
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTH 594



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 180/342 (52%), Gaps = 12/342 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDD 133
           +T ++  +C+   L +A  +F+ +P +    + TM+ GY +   +D A   F +    ++
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE 315

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V+     +T +LK   + G +    E+   + +      + A   ++  + + G++ +A 
Sbjct: 316 VS-----WTAMLKGYTNCGRLDEASELFNAMPIKS----VVACNAMILCFGQNGEVPKAR 366

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD+M E+D  +W+ ++  + + G    AL+L   M  EG R +F +++S+L   A + 
Sbjct: 367 QVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLA 426

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  G+ +H   +R+ FD  V V++ L+ MY KCG +  A+ VFD    ++VV WNS+I 
Sbjct: 427 NLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIIT 486

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLG 372
            Y + G   EA+R+F  M   G+ P +VT +  L AC+  G++++G+ +   ++ + ++ 
Sbjct: 487 GYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVE 546

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
             +     ++ +  +  K++ A D+  K+  +   + W A++
Sbjct: 547 QKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 186/407 (45%), Gaps = 42/407 (10%)

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +L+  Y++ G++E AR+VFD M+ +N++SWNS++A Y +   P+EA  +F KM ++   
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 338 PTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
             N  +          G +  G+     ++ D++     VS T +++  Y K   +  A 
Sbjct: 162 SWNGLVS---------GYINNGMINEAREVFDRMPERNVVSWT-AMVRGYVKEGMISEAE 211

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F ++  K +VSW  M+ G  Q GR++EA   F  M  K    D  T  ++I    ++ 
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQVG 267

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  A+ +   + R    +NV   T +I  Y +   V  AR LF++M E++  +W  M+ 
Sbjct: 268 RLVEARMLFDEMPR----RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLK 323

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK-KDYGI 574
           GY   G    A ELFN M        +   LC       +G V +    F  ++ KD G 
Sbjct: 324 GYTNCGRLDEASELFNAMPIKSVVACNAMILCF----GQNGEVPKARQVFDQMREKDEGT 379

Query: 575 EPVMDHYGAMVDLLGRAG-RLN--EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
                 + AM+ +  R G  L+  E +  +Q+  I P      ++L  C    N++ G +
Sbjct: 380 ------WSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 632 AANRLF--ELDPDEGGYHVLLA------NIYAAASMWDKLAKVRTIM 670
              +L   + D D     VLL+      N+  A  ++D+ A    +M
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 154/339 (45%), Gaps = 34/339 (10%)

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           +F   +L++      +   NSLI+ YS+  ++++A  +F +++ K ++SWN+++ GY QN
Sbjct: 83  MFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN 142

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
            R  EA N F KM  +N    + +   ++       +I  A+     V     E+NV   
Sbjct: 143 KRPQEAQNMFDKMSERN----TISWNGLVSGYINNGMINEAR----EVFDRMPERNVVSW 194

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-- 537
           TA++  Y K G +  A  LF  M E++V +W VM+ G    G    A  LF+ M E    
Sbjct: 195 TAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254

Query: 538 TKPNDITFLCAISACSHSGLV-----EEGIHYFTSL-------------KKDYGIEPVMD 579
           T+ N I   C +     + ++        +  +T++             +K + + P  +
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN 314

Query: 580 H--YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
              + AM+      GRL+EA +    MPI+  +    AM+     +  V    +  +++ 
Sbjct: 315 EVSWTAMLKGYTNCGRLDEASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           E   DEG +  ++  +Y    +     ++  +M+++G++
Sbjct: 374 E--KDEGTWSAMI-KVYERKGLELDALELFRMMQREGIR 409


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/815 (31%), Positives = 427/815 (52%), Gaps = 83/815 (10%)

Query: 44   ALLLEVCTSLKELRRILPLIIKSGLCDQHL--FQTKLVS----LFCKYNSLSDAARVFEP 97
            A++  +C  L  + R L   I  GL  + L    T++VS     + +  SL  A ++F+ 
Sbjct: 528  AMVFRICAVL--MYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDE 585

Query: 98   IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
            +P + D  ++ ++    +  + + AV     MR+            LL+VC +     +G
Sbjct: 586  MPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQG 645

Query: 158  KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            ++IHG ++  GF  ++     ++ MY++ G++E + K+F+ M +R+L SWN+IV+ + + 
Sbjct: 646  RQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRL 705

Query: 218  GFAELALDLVTRMHEEGRRGDFIT-----------------------------------I 242
            G+ + A+ L+  M   G + D +T                                   I
Sbjct: 706  GYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSI 765

Query: 243  VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             S+L AV   G +++GKA+HGY +R      V V T L+DMY K G +  AR+VFD M  
Sbjct: 766  SSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDE 825

Query: 303  RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
            +N+V+WNS+I+     G  +EA  +  +M  +G++   VT                    
Sbjct: 826  KNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVT-------------------- 865

Query: 363  HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK----TLVSWNAMILGYAQ 418
                            NSL+S Y+   K ++A  +  K++       +VSW A++ G ++
Sbjct: 866  ---------------WNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSK 910

Query: 419  NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
            NG     L  F KM+ + + P+S T+ S++  L  LS++   K +H+  +++   ++  V
Sbjct: 911  NGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHV 970

Query: 479  MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             TAL+DMYAK G + +A  +F  +  + + +WN MI GY     G+  + +FN MLE   
Sbjct: 971  ATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGI 1030

Query: 539  KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            +P+ ITF   +S C +SGLV EG  YF  ++  YG+ P ++H   MV+LLGR+G L+EAW
Sbjct: 1031 EPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAW 1090

Query: 599  DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            DFI+ MP++P  T++GA L +CKIH+++EL E A  RL  L+P     ++++ N+Y+  +
Sbjct: 1091 DFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLN 1150

Query: 659  MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
             W  + ++R  M    ++     S +++   VH FY+    HP    IY  L  L+ E+K
Sbjct: 1151 RWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMK 1210

Query: 719  AAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             +GY+PDT  IH +V +  +E LL  H+EKLA+ +GL+     + I + KN  +C DCH 
Sbjct: 1211 KSGYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHT 1270

Query: 778  ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
              KYIS++  REI++++  R H F++G CSC + W
Sbjct: 1271 VAKYISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 237/492 (48%), Gaps = 40/492 (8%)

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL-A 223
           +++ F L+ F    ++  Y + G+   A  +F     R+ VSW   +      G  +   
Sbjct: 450 LIDRFELE-FISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKV 508

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD-SIVNVSTALVD 282
           L+   R+  +G   D + +  +    A +    +G  +HG  ++ G D S   V +AL+ 
Sbjct: 509 LEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMG 568

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y +C  ++ A  +FD M  R+ ++WN ++   ++ GN E+A+++F+ M   G +  + T
Sbjct: 569 FYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDST 628

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +++ L  C++     +G  +H  + +L   ++VSM NSLI MYS+  K++ +  +F+ + 
Sbjct: 629 MVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMV 688

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT------------------- 443
            + L SWN+++  Y + G V++A+    +M +  +KPD  T                   
Sbjct: 689 DRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIA 748

Query: 444 ----------------MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
                           + S++ A+ E  +++  K IH  VIR+    +V+V T LIDMY 
Sbjct: 749 VLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYI 808

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           K G +  AR +FDMM+E+++  WN +I G    GL K A  L ++M +   K N +T+  
Sbjct: 809 KTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNS 868

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +S  +  G  E+ +     +KK+ G+EP +  + A++    + G          KM  E
Sbjct: 869 LVSGYATWGKTEKALAVVGKMKKN-GVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQ-E 926

Query: 608 PGITVFGAMLGA 619
            G++   A + +
Sbjct: 927 EGVSPNSATISS 938


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/683 (33%), Positives = 393/683 (57%), Gaps = 4/683 (0%)

Query: 46  LLEVCTSLKELRRI--LPLIIKS-GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L++ C +LK  + I  L   + S G+       + L+  + +Y  +   +++F+ +  K 
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             +++ ML GYAK  +LD  +     MR D ++P    +  +L VC     I  G ++HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++V+G   +      +++MY+KCG+ ++A K+F  M   D V+WN +++G+ Q+G  E 
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +L     M   G   D IT  S+LP+V+   +L   K +H Y MR      + +++AL+D
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  V  A+ +F    S +VV + +MI+ Y+  G   +++ +F+ ++   + P  +T
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L     L  L+ G  +H  + +       ++  ++I MY+KC +++ A +IF +L 
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSWN+MI   AQ+   + A++ F +M    I  D  ++ + + A A L    + K 
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA 563

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  +I+     +V+  + LIDMYAKCG +  A  +F  M E+++ +WN +I   G HG 
Sbjct: 564 IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGK 623

Query: 523 GKAAVELFNKMLEGP-TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            K ++ LF++M+E    +P+ ITFL  IS+C H G V+EG+ +F S+ +DYGI+P  +HY
Sbjct: 624 LKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY 683

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VDL GRAGRL EA++ ++ MP  P   V+G +LGAC++HKNVEL E A+++L +LDP
Sbjct: 684 ACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDP 743

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              GY+VL++N +A A  W+ + KVR++M+++ +QK PG S +E+    H F SG   HP
Sbjct: 744 SNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHP 803

Query: 702 QSKRIYTFLETLIDEIKAAGYVP 724
           +S  IY+ L +L+ E++  GY+P
Sbjct: 804 ESSHIYSLLNSLLGELRLEGYIP 826



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/661 (24%), Positives = 325/661 (49%), Gaps = 35/661 (5%)

Query: 34  IPSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           IP R+     +LLL+ C++   L++ +++   +I + +        +++ ++    S SD
Sbjct: 34  IPRRL-----SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88

Query: 91  AARVFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
             ++F  +  +  ++  +++++  + +   L+ A++F  +M    V+P V  +  L+K C
Sbjct: 89  CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             +   +    +   +   G   + F  + ++  Y + G+I+   K+FDR+ ++D V WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++ G+A+ G  +  +   + M  +    + +T   +L   A+   + +G  +HG  + +
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G D   ++  +L+ MY+KCGR + A  +F  M   + V+WN MI+ YV+ G  EE++  F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            +M+  GV P  +T    L + +   +LE    +H  + +  +  D+ +T++LI  Y KC
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           + V  A +IFS+     +V + AMI GY  NG   ++L  F  +    I P+  T+VS++
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
           P +  L  ++  + +H  +I+  F+    +  A+IDMYAKCG +  A  +F+ +++R + 
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFT 566
           +WN MI          AA+++F +M       + ++   A+SAC++  S    + IH F 
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568

Query: 567 ---SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
              SL  D   E        ++D+  + G L  A +  + M  E  I  + +++ AC  H
Sbjct: 569 IKHSLASDVYSE------STLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621

Query: 624 KNV--------ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
             +        E+ EK+  R     PD+  +  ++++      + + +   R++ E  G+
Sbjct: 622 GKLKDSLCLFHEMVEKSGIR-----PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676

Query: 676 Q 676
           Q
Sbjct: 677 Q 677


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 270/763 (35%), Positives = 405/763 (53%), Gaps = 92/763 (12%)

Query: 58  RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
           R+ P +I+S          K ++   +   ++DA R+F  +P +  + Y+ ML GY+   
Sbjct: 33  RLEPEVIRS---------NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
            L  A S    +      P  Y+Y  LL        +   + +  ++ V     D     
Sbjct: 84  RLPLAASLFRAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYN 135

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++ +A  G +  A   FD  PE+D VSWN ++A + +NG  E A  L     E     
Sbjct: 136 VMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----W 191

Query: 238 DFITIVSILPAVANVGSLRIGKA----------------VHGYAMRAG-------FDSI- 273
           D I+  +++      G +   +                 V GYA R         FD+  
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251

Query: 274 ---VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
              V   TA+V  YA+ G +E AR VFD M  RN VSWN+M+AAY++           ++
Sbjct: 252 VRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ-----------RR 300

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+D+  E  N      +  C                       +V+  N++++ Y++   
Sbjct: 301 MMDEAKELFN------MMPC----------------------RNVASWNTMLTGYAQAGM 332

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           ++ A  +F  +  K  VSW AM+  Y+Q G   E L  F +M       +      V+  
Sbjct: 333 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            A+++ +     +H  +IR+ +    FV  AL+ MY KCG +  AR  F+ M ER V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N MI GY  HG GK A+E+F+ M    TKP+DIT +  ++ACSHSGLVE+GI YF S+  
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           D+G+    +HY  M+DLLGRAGRL EA D ++ MP EP  T++GA+LGA +IH+N ELG 
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            AA ++FEL+P+  G +VLL+NIYA++  W    K+R +ME++G++K PG S +E++N+V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
           H+F +G   HP+ ++IY FLE L   +K AGYV  T+ + HDVE+  +E++L  HSEKLA
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLA 692

Query: 750 IAFGLLNSSPGSTIHIRKNLRVCGDCHNATK-YISL---VTGR 788
           +A+G+LN  PG  I + KNLRVCGDCHNA K +I L   V+GR
Sbjct: 693 VAYGILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/680 (36%), Positives = 411/680 (60%), Gaps = 22/680 (3%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYA--KCGQIEEAYKMF 196
           N  + L+ CG     R   ++H  L +   SL+  +++  ++ +YA  +   ++ A+ +F
Sbjct: 17  NLHFPLQNCGTE---REANQLHA-LSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLF 72

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           D + E  LVSWN ++  + +N  +  A+ L  ++  +     F T+  +L   A +G+L+
Sbjct: 73  DWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDSF-TLPCVLKGCARLGALQ 131

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            GK +HG  ++ GF     V ++LV MY+KCG +E  R VFD M+ ++VVSWNS+I  Y 
Sbjct: 132 EGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYA 191

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE--RGIFVHKLLDQLKLGTD 374
             G  E A+ +F++M ++  +  + TI+  +   +  G LE  R +F     D++ +   
Sbjct: 192 RCGEIELALEMFEEMPEK--DSFSWTIL--IDGLSKSGKLEAARDVF-----DRMPIRNS 242

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           VS  N++I+ Y K    + A ++F ++  ++LV+WN+MI GY +N +  +AL  F  M  
Sbjct: 243 VSW-NAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLR 301

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           ++I P+  T++  + A + +  +   +W+H+ +++S F+ +  + T LI+MY+KCG+V +
Sbjct: 302 EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 361

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A  +F  + ++ +  W  +I G G HGL +  +ELF++M     KP+ ITF+  ++ACSH
Sbjct: 362 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 421

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +G  E+   YF  +  DYGI+P ++HYG ++D+L RAG L EA D I++MPI+    ++ 
Sbjct: 422 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 481

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           ++L   + H N+ +GE AA  L +L PD  G +V+L+N+YAAA +W+K+ +VR +M+KKG
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 541

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDV-- 732
           ++K PGCS +E +  +H F  G   HPQ++ IY  L  +  ++  AG++PDT  +     
Sbjct: 542 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 601

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ED  +E  L +HSE+LAIAFGLLN   GS I I KNLR+C DCH  TK +S +  REII+
Sbjct: 602 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 661

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+G CSC D+W
Sbjct: 662 RDGSRFHHFKSGSCSCKDFW 681



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 256/501 (51%), Gaps = 26/501 (5%)

Query: 29  SQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC--KYN 86
           S + ++P  ++       L+ C + +E  ++  L IK+   +     ++L++L+   + N
Sbjct: 9   SLQPFLPPNLH-----FPLQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRIN 63

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           +L  A  +F+ I +     ++ ++K Y +    +DA++   ++  D V P  +    +LK
Sbjct: 64  NLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLK 122

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C  +G ++ GK+IHG ++  GF +D F ++ +V+MY+KCG+IE   K+FDRM ++D+VS
Sbjct: 123 GCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVS 182

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN+++ G+A+ G  ELAL++   M E+    D  +   ++  ++  G L         A 
Sbjct: 183 WNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLE--------AA 230

Query: 267 RAGFDSIV---NVS-TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
           R  FD +    +VS  A+++ Y K G   TA+ +FD M  R++V+WNSMI  Y       
Sbjct: 231 RDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFT 290

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A+++F+ ML + + P   TI+ A+ A + +  L  G +VH  + +    TD  +   LI
Sbjct: 291 KALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI 350

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
            MYSKC  V  A  +F  +  K L  W ++I+G   +G V + L  F +M    +KP + 
Sbjct: 351 EMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAI 410

Query: 443 TMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           T + V+ A +       A ++   +      + ++     LID+  + G +  A+   + 
Sbjct: 411 TFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIER 470

Query: 502 MN-ERHVTTWNVMIDGYGTHG 521
           M  + +   W  ++ G   HG
Sbjct: 471 MPIKANKVIWTSLLSGSRKHG 491


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/622 (38%), Positives = 365/622 (58%), Gaps = 13/622 (2%)

Query: 200 PERDLVSWNT--IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           P +D+ S N   ++    + G  + A+ L+       ++    T   ++ +     SL  
Sbjct: 37  PTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKK----TFELLINSCIEQNSLSD 92

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G  VH   + +G D    ++T L++MY   G V+ A  VFD  + + +  WN++  A   
Sbjct: 93  GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAM 152

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA----DLGDLERGIFVHKLLDQLKLGT 373
               E+ + ++ +M   G+     T    L AC      +  L +G  +H  + +     
Sbjct: 153 ASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEG 212

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM- 432
            V +  +L+ +Y++   V  A+ +F  +  K +VSW+AMI  YA+N    +AL  F  M 
Sbjct: 213 HVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMM 272

Query: 433 -RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
             + +  P+  TMVSV+ A A L+ + + K +HA V+R   +  + V+  LI MY +CG 
Sbjct: 273 LEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGE 332

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           + T + +FD M +R V +WN +I  YG HGLGK A+++F  M+     P+ ITF+  + A
Sbjct: 333 ISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCA 392

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           CSH+GLVEE    F S+   Y I P M+HY  MVD+LGRA RL+EA + IQ M  +PG T
Sbjct: 393 CSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPT 452

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           V+G++LG+C+IH NVEL E+A+  LFEL+P   G +VLL++IYA + MW+ + +VR  +E
Sbjct: 453 VWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLE 512

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
            +GLQK P CS +E+K +++S  S    +PQ + +  FL TL+ EIK  GYVP TN + +
Sbjct: 513 SRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTY 572

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           D+++  +E ++  HS KLA+AFGL+N+S G  I I  NLR+C DCH   K++S  T REI
Sbjct: 573 DLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREI 632

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           ++RD++RFHCFK+GVCSCGDYW
Sbjct: 633 LLRDVNRFHCFKDGVCSCGDYW 654



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 196/349 (56%), Gaps = 7/349 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++ SGL       TKL++++C   S+  A +VF+   +K   +++ + +  A  +  +D 
Sbjct: 100 LVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDL 159

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCG----DVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           +    +M +  +    + YTY+LK C      +  +R+GKEIH  ++ +G+   +  MT 
Sbjct: 160 LVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTT 219

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--RR 236
           ++++YA+ G +  A  +F  MP++++VSW+ ++A +A+N     AL+L   M  E     
Sbjct: 220 LLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTV 279

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + IT+VS+L A A++ +L  GK VH Y +R G DS + V   L+ MY +CG + T + V
Sbjct: 280 PNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRV 339

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
           FD MK R+V+SWNS+I+ Y   G  ++A++IF+ M+++GV P+ +T +  L AC+  G +
Sbjct: 340 FDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLV 399

Query: 357 ERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
           E   I    +L++ ++   +     ++ +  +  ++D A ++   +  K
Sbjct: 400 EEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK 448



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 14/365 (3%)

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
           D L  ++ +G     +L  AV  L      +  P    +  L+  C +   +  G ++H 
Sbjct: 47  DDLIQSLCRG----GNLKQAVQLLC----CEPNPTKKTFELLINSCIEQNSLSDGVDVHH 98

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           +L+ +G   D +  T ++NMY   G ++ A K+FD   E+ +  WN I    A     E 
Sbjct: 99  RLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGED 158

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVST 278
            L L  +M+  G   +  T   +L A      ++  LR GK +H + +R G++  V+V T
Sbjct: 159 LLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMT 218

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE- 337
            L+D+YA+ G V  A  VF  M  +N+VSW++MIA Y +   P +A+ +FQ M+ +  + 
Sbjct: 219 TLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDT 278

Query: 338 -PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
            P  +T++  L ACA L  LE G  VH  + +  L + + + N+LI+MY +C ++     
Sbjct: 279 VPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR 338

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +F  ++ + ++SWN++I  Y  +G   +A+  F  M ++ + P   T ++V+ A +   +
Sbjct: 339 VFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGL 398

Query: 457 IRYAK 461
           +  AK
Sbjct: 399 VEEAK 403



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 23/306 (7%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L +C  L++ + I   I++ G        T L+ ++ ++  +S A+ VF  +PDK    +
Sbjct: 190 LSIC-PLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSW 248

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
             M+  YAK      A+     M  +  D  P       +L+ C  +  +  GK +H  +
Sbjct: 249 SAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYV 308

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  G    L  +  ++ MY +CG+I    ++FD M +RD++SWN++++ +  +G  + A+
Sbjct: 309 LRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAI 368

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV-------- 276
            +   M   G    +IT +++L A ++ G +   K +        F+S++N         
Sbjct: 369 QIFENMINRGVSPSYITFITVLCACSHAGLVEEAKIL--------FESMLNKYRIHPRME 420

Query: 277 -STALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
               +VD+  +  R++ A  +   M  +     W S++ +     N E A R    + + 
Sbjct: 421 HYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFE- 479

Query: 335 GVEPTN 340
            +EP N
Sbjct: 480 -LEPKN 484


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/557 (42%), Positives = 333/557 (59%), Gaps = 3/557 (0%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           K +H   +R GF    ++ T L++     G +  AR VFD M    +  WN++   YV  
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
             P E++ +++KM D GV P   T    + A + LGD   G  +H  + +   G    + 
Sbjct: 88  QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
             L+ MY K  ++  A  +F  +Q K LV+WNA +    Q G    AL YF KM +  ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
            DSFT+VS++ A  +L  +   + I+    +   + N+ V  A +DM+ KCG    AR L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
           F+ M +R+V +W+ MI GY  +G  + A+ LF  M     +PN +TFL  +SACSH+GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327

Query: 559 EEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            EG  YF+ +    D  +EP  +HY  MVDLLGR+G L EA++FI+KMP+EP   ++GA+
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           LGAC +H+++ LG+K A+ L E  PD G YHVLL+NIYAAA  WD + KVR+ M K G +
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K    S VE + ++H F  G   HPQSK IY  L+ ++ +I+  GYVPDT S+ HDVE  
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E  LS HSEKLAIAFGL+   PG  I + KNLR C DCH  +K++S +T  EII+RD 
Sbjct: 508 EKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDK 567

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH F+NGVCSC ++W
Sbjct: 568 NRFHHFRNGVCSCKEFW 584



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 170/317 (53%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           S LL    +  K+L++I  +++++G  +++   T+L+        +  A +VF+ +    
Sbjct: 14  SELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             L++T+ KGY +     +++    +MR   V P  + Y +++K    +G+   G  +H 
Sbjct: 74  IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++  GF       T +V MY K G++  A  +F+ M  +DLV+WN  +A   Q G + +
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL+   +M  +  + D  T+VS+L A   +GSL IG+ ++  A +   D  + V  A +D
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+ KCG  E AR++F+ MK RNVVSW++MI  Y   G+  EA+ +F  M ++G+ P  VT
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313

Query: 343 IMEALHACADLGDLERG 359
            +  L AC+  G +  G
Sbjct: 314 FLGVLSACSHAGLVNEG 330



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 197/396 (49%), Gaps = 31/396 (7%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K+IH  ++  GFS     +T ++      G +  A ++FD M +  +  WNT+  G+ +N
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                +L L  +M + G R D  T   ++ A++ +G    G A+H + ++ GF  +  V+
Sbjct: 88  QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T LV MY K G + +A  +F+ M+ +++V+WN+ +A  V+ GN   A+  F KM    V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             + T++  L AC  LG LE G  ++    + ++  ++ + N+ + M+ KC   + A  +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F +++ + +VSW+ MI+GYA NG   EAL  F  M+++ ++P+  T + V+ A +   ++
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              K   +L+++S  +KN+                           E     +  M+D  
Sbjct: 328 NEGKRYFSLMVQSN-DKNL---------------------------EPRKEHYACMVDLL 359

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           G  GL + A E   KM   P +P+   +   + AC+
Sbjct: 360 GRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA 392



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 3/234 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++K G     +  T+LV ++ K+  LS A  +FE +  K    ++  L    +  +   A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           + +  +M  D V    +    +L  CG +G +  G+EI+ +        ++      ++M
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           + KCG  E A  +F+ M +R++VSW+T++ G+A NG +  AL L T M  EG R +++T 
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCGRVETA 293
           + +L A ++ G +  GK      +++   ++         +VD+  + G +E A
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/672 (36%), Positives = 384/672 (57%), Gaps = 37/672 (5%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPE 201
           LL+ C  + ++   K+IH   I  G S D      V+      + G +  A+++FD +P 
Sbjct: 13  LLEKCKSMYQL---KQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPH 69

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
             +  WNT++ G+++    E  + +   M     + D  T    L       +L+ GK +
Sbjct: 70  PSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
             +A++ GFDS + V  A + M++ CG V+ A  VFD   +  VV+WN M++ Y    N 
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY----NR 185

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            +  +I + +L              L AC+ L DLE G  + K ++    G  V      
Sbjct: 186 VKQFKISKMLL-------------VLSACSKLKDLEWGKHIFKYIN----GGIVE----- 223

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
             M++ C ++D A  +F  ++ + +VSW AMI GY +      AL  F +M+  N+KPD 
Sbjct: 224 -HMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDE 282

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FTMVS++ A A L  +   +W+   + ++  + + FV  AL+DMY KCG V  A+ +F  
Sbjct: 283 FTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKE 342

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M ++   TW  MI G   +G G+ A+ +F+ M+E    P++IT++  + AC    +V++G
Sbjct: 343 MYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKG 398

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             +FT++   +GI+P + HYG MVDLLG  G L EA + I  MP++P   V+G+ LGAC+
Sbjct: 399 KSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACR 458

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           +HKNV+L + AA ++ EL+P+ G  +VLL NIYAA+  W+ L +VR +M ++G++KTPGC
Sbjct: 459 VHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGC 518

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENL 740
           SL+EL   V+ F +G   HPQSK IY  LE ++  +  AGY PDT+ +  D+ +  +E  
Sbjct: 519 SLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETA 578

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           L  HSEKLAIA+ L++S PG TI I KNLR+C DCH+  K +S    RE+IV+D  RFH 
Sbjct: 579 LYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHH 638

Query: 801 FKNGVCSCGDYW 812
           F++G CSC ++W
Sbjct: 639 FRHGSCSCNNFW 650



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 244/515 (47%), Gaps = 78/515 (15%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNS--LSDAARVFEPIPDKLD 103
           LLE C S+ +L++I    IK GL    LF+ ++++  C + S  ++ A +VF+ IP    
Sbjct: 13  LLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSM 72

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            +++TM+KGY+K +  ++ VS  + M   ++ P  + + + LK       ++ GKE+   
Sbjct: 73  FIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNH 132

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            + +GF  +LF     ++M++ CG ++ A+K+FD     ++V+WN +++G+  N   +  
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY--NRVKQFK 190

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD- 282
           +                 ++ +L A + +  L  GK +  Y           ++  +V+ 
Sbjct: 191 IS---------------KMLLVLSACSKLKDLEWGKHIFKY-----------INGGIVEH 224

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+A CG ++ A+ VFD MK+R+VVSW +MI  Y+   +   A+ +F++M    V+P   T
Sbjct: 225 MFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFT 284

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L ACA LG LE G +V   +D+     D  + N+L+ MY KC  V +A  +F ++ 
Sbjct: 285 MVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMY 344

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K   +W  MI+G A NG   EAL  F  M   ++ PD  T + V+ A            
Sbjct: 345 QKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----------- 393

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGY 517
                                        V   ++ F  M  +H     VT +  M+D  
Sbjct: 394 ----------------------------MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLL 425

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           G  G  + A+E+   M   P KPN I +   + AC
Sbjct: 426 GCVGCLEEALEVIVNM---PVKPNSIVWGSPLGAC 457



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 19/300 (6%)

Query: 45  LLLEVCTSLKELR--RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+L  C+ LK+L   + +   I  G+ +          +F     + +A  VF+ +  + 
Sbjct: 196 LVLSACSKLKDLEWGKHIFKYINGGIVEH---------MFAACGEMDEAQGVFDNMKTRD 246

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+ GY +      A++    M+  +V P  +    +L  C  +G +  G+ +  
Sbjct: 247 VVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKT 306

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +  N    D F    +V+MY KCG + +A K+F  M ++D  +W T++ G A NG  E 
Sbjct: 307 CIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEE 366

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH-GYAMRAGFDSIVNVSTALV 281
           AL + + M E     D IT + +L A      +  GK+      M+ G    V     +V
Sbjct: 367 ALAMFSNMIEASVTPDEITYIGVLCACM----VDKGKSFFTNMTMQHGIKPTVTHYGCMV 422

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           D+    G +E A  V   M  + N + W S + A     N + A    +++L+  +EP N
Sbjct: 423 DLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILE--LEPEN 480


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/650 (35%), Positives = 377/650 (58%), Gaps = 1/650 (0%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
           F ++LV+++  + SL  A   F  +P K    ++ +L+G         A+ F   M    
Sbjct: 69  FASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHG 128

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V P  Y Y  +LK C  +  ++ G+ +H + +      +++    V++M+AKCG +E+A 
Sbjct: 129 VTPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDAR 187

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +MF+ MP+RDL SW  ++ G   NG    AL L  +M  EG   D + + SILPA   + 
Sbjct: 188 RMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLE 247

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           ++++G A+   A+R+GF+S + VS A++DMY KCG    A  VF  M   +VVSW+++IA
Sbjct: 248 AVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIA 307

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y +    +E+ +++  M++ G+    +     L A   L  L++G  +H  + +  L +
Sbjct: 308 GYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMS 367

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV + ++LI MY+ C  +  A  IF     K ++ WN+MI+GY   G    A   F ++ 
Sbjct: 368 DVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIW 427

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
               +P+  T+VS++P   ++  +R  K IH  V +S    NV V  +LIDMY+KCG + 
Sbjct: 428 GAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLE 487

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
               +F  M  R+VTT+N MI   G+HG G+  +  + +M E   +PN +TF+  +SACS
Sbjct: 488 LGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACS 547

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+GL++ G   + S+  DYGIEP M+HY  MVDL+GRAG L+ A+ FI +MP+ P   VF
Sbjct: 548 HAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVF 607

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G++LGAC++H  VEL E  A R+ +L  D+ G++VLL+N+YA+   W+ ++KVR++++ K
Sbjct: 608 GSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDK 667

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           GL+K PG S +++ + ++ F++ S  HP   +I   L +L+  +K+  Y+
Sbjct: 668 GLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKSEDYM 717



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 187/362 (51%), Gaps = 4/362 (1%)

Query: 44  ALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C  L+ ++  + L    ++SG          ++ ++CK     +A RVF  +  
Sbjct: 237 ASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVY 296

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                + T++ GY++     ++    I M    +A      T +L   G +  +++GKE+
Sbjct: 297 SDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEM 356

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++  G   D+   + ++ MYA CG I+EA  +F+   ++D++ WN+++ G+   G  
Sbjct: 357 HNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDF 416

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A     R+     R +FIT+VSILP    +G+LR GK +HGY  ++G    V+V  +L
Sbjct: 417 ESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSL 476

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMY+KCG +E    VF  M  RNV ++N+MI+A    G  E+ +  +++M ++G  P  
Sbjct: 477 IDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNK 536

Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           VT +  L AC+  G L+RG +  + +++   +  ++   + ++ +  +   +D A    +
Sbjct: 537 VTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFIT 596

Query: 400 KL 401
           ++
Sbjct: 597 RM 598



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 2/222 (0%)

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S  + L+++Y     +  A   F  L  K +++WNA++ G    G   +A++++  M   
Sbjct: 68  SFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQH 127

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            + PD++T   V+ A + L  ++  +W+H   +    + NV+V  A+IDM+AKCG+V  A
Sbjct: 128 GVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDA 186

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +F+ M +R + +W  +I G   +G    A+ LF KM      P+ +     + AC   
Sbjct: 187 RRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRL 246

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             V+ G+       +  G E  +    A++D+  + G   EA
Sbjct: 247 EAVKLGMALQVCAVRS-GFESDLYVSNAVIDMYCKCGDPLEA 287


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/670 (35%), Positives = 385/670 (57%), Gaps = 3/670 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD-ALYHTML 110
           SLK+ + +   ++  GL +       L+SL+   N    A  VF+ I +  + +L + ++
Sbjct: 18  SLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLM 77

Query: 111 KGYAKFASLDDAVSFLIR-MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
            GY +    D+A+    + M Y  + P  Y Y  +LK CG +  +  G+ IH  L+  G 
Sbjct: 78  AGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGL 137

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            +D+   + +V MYAKC + E A K+FD MP++D+  WNT+++ + Q+G  E AL     
Sbjct: 138 MVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGM 197

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M   G   D +TI + + + A +  L  G+ +H   + +GF     VS ALVDMY KCG+
Sbjct: 198 MRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQ 257

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +E A  VF+ M ++ VV+WNSMI  Y   G+    +++F++M  +GV+PT  T+   L A
Sbjct: 258 LEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMA 317

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C+    L  G FVH  + + ++  D+ + +SL+ +Y KC KV+ A  IF  +   T VSW
Sbjct: 318 CSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N MI GY   G++ +AL  F +M    ++PD+ T  SV+ A ++L+ +   + IH L++ 
Sbjct: 378 NVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVE 437

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                N  VM AL+DMYAKCGAV  A  +F  + ER + +W  MI  YG+HG    A+EL
Sbjct: 438 RNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALEL 497

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F +ML+   KP+ +TFL  +SACSH+GLV++G+++F  +   YGI P ++HY  ++ LLG
Sbjct: 498 FAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLG 557

Query: 590 RAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           RAGRL+EA++ +Q  P I     +   +  AC++HKN++LG + A  L + DPD+   ++
Sbjct: 558 RAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYI 617

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           +L+N+YA+   WD++  VR+ M+  GL+K PGCS +E+  ++  F+     H   + I  
Sbjct: 618 ILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGN 677

Query: 709 FLETLIDEIK 718
            L  L   ++
Sbjct: 678 ILSYLTSHME 687



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 264/487 (54%), Gaps = 8/487 (1%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+   +   +++GK +H +++  G   D++    ++++Y  C   + A  +FD +    
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 204 LVSW-NTIVAGFAQNGFAELALDLVTR-MHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +S  N ++AG+ +N   + AL L  + M     + D  T  S+L A   +  + +G+ +
Sbjct: 69  EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   ++ G    + V ++LV MYAKC   E A  +FD M  ++V  WN++I+ Y + G  
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           EEA+R F  M   G EP +VTI  A+ +CA L DL+RG  +HK L       D  ++ +L
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAAL 248

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + MY KC +++ A ++F ++  KT+V+WN+MI GY   G     +  F +M S+ +KP  
Sbjct: 249 VDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTL 308

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T+ S + A ++ + +   K++H  +IR+  + ++F+ ++L+D+Y KCG V +A  +F +
Sbjct: 309 TTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKL 368

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M +    +WNVMI GY T G    A+ LF +M +   +P+ ITF   ++ACS    +E+G
Sbjct: 369 MPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG 428

Query: 562 --IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
             IH     +     E VM   GA++D+  + G + EA+   + +P E  +  + +M+ A
Sbjct: 429 REIHNLIVERNLGNNEVVM---GALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITA 484

Query: 620 CKIHKNV 626
              H  V
Sbjct: 485 YGSHGRV 491



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 236/523 (45%), Gaps = 58/523 (11%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           ++ +L A  N  SL+ GK +H   +  G  + V V   L+ +Y  C   + A+ VFD ++
Sbjct: 6   LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65

Query: 302 SRNVVSW-NSMIAAYVEGGNPEEAMRIFQK-MLDQGVEPTNVTIMEALHACADLGDLERG 359
           +   +S  N ++A Y      +EA+ +F K M    ++P + T    L AC  L  +  G
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  L +  L  D+ + +SL+ MY+KC + + A  +F ++  K +  WN +I  Y Q+
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G+  EAL YF  MR    +PDS T+ + I + A L  +   + IH  ++ S F  + FV 
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS 245

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            AL+DMY KCG +  A  +F+ M  + V  WN MI+GYG  G G + ++LF +M     K
Sbjct: 246 AALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVK 305

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           P   T    + ACS S  + EG  +H +    +   I+P +    +++DL  + G++  A
Sbjct: 306 PTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR---IQPDIFLNSSLMDLYFKCGKVESA 362

Query: 598 WDFIQKMP----------------------------------IEPGITVFGAMLGACKIH 623
               + MP                                  +EP    F ++L AC   
Sbjct: 363 ETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQL 422

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT-PGCS 682
             +E G +  N + E +        L  N     ++ D  AK   + E  G+ K  P   
Sbjct: 423 AALEKGREIHNLIVERN--------LGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERD 474

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           LV       S+ S  T +    R+Y  LE L  E+  +   PD
Sbjct: 475 LV-------SWTSMITAYGSHGRVYEALE-LFAEMLQSNVKPD 509



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D+  ++ ++ A      ++  K +H  V+    + +V+V   LI +Y  C     A+ +F
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 500 DMM-NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT-KPNDITFLCAISACS---- 553
           D++ N   ++  N ++ GY  + +   A+ LF+K++  P  KP+  T+   + AC     
Sbjct: 62  DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121

Query: 554 -------HSGLVEEGI 562
                  H+ LV+EG+
Sbjct: 122 VVLGQMIHTCLVKEGL 137


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/575 (41%), Positives = 350/575 (60%), Gaps = 2/575 (0%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
            T  SIL A A    +  G+ +H    + GFD+ + V TALVDMYAKC  + +A  VFD 
Sbjct: 11  FTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQ 70

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLER 358
           M  RN+VSWNSMI  +      + A+ +F+ +L ++ V P  V++   L ACA++G L  
Sbjct: 71  MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 130

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  VH ++ +  L     + NSL+ MY KC+  D    +F  +  + +V+WN +++G+ Q
Sbjct: 131 GRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 190

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           N +  EA NYF  MR + I PD  +  +V+ + A L+ +     IH  +I+  + KN+ +
Sbjct: 191 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 250

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
           + +LI MYAKCG++  A  +F+ + + +V +W  MI  Y  HG     +ELF  ML    
Sbjct: 251 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 310

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P+ +TF+C +SACSH+G VEEG+ +F S+KK + + P  +HY  MVDLLGRAG L+EA 
Sbjct: 311 EPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAK 370

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            FI+ MP++P  +V+GA+LGAC+ + N+++G +AA RLFE++P   G +VLLAN+   + 
Sbjct: 371 RFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSG 430

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
             ++  +VR +M   G++K PGCS +++KN    F +    H  S  IY  LE L   +K
Sbjct: 431 RLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVK 490

Query: 719 AAGYVPDTNSIHD-VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
             GYV +T  + + +E+  +E  L  HSEKLA+AFGLL     S I I+KNLR CG CH 
Sbjct: 491 KKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHT 550

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K  S +  REIIVRD++RFH F +G CSCGDYW
Sbjct: 551 VMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 217/440 (49%), Gaps = 12/440 (2%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           MR     P  + ++ +L        +  G+++H  +  +GF  ++F  T +V+MYAKC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR-MHEEGRRGDFITIVSILP 247
           +  A ++FD+MPER+LVSWN+++ GF  N   + A+ +    + E+    + +++ S+L 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           A AN+G L  G+ VHG  ++ G   +  V  +L+DMY KC   +    +F  +  R+VV+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           WN ++  +V+    EEA   F  M  +G+ P   +    LH+ A L  L +G  +H  + 
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +L    ++ +  SLI+MY+KC  +  A  +F  ++   ++SW AMI  Y  +G  N+ + 
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV--MTALIDM 485
            F  M S+ I+P   T V V+ A +    +      H   ++   + N        ++D+
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKKIHDMNPGPEHYACMVDL 359

Query: 486 YAKCGAVGTARALFDMMNERHV-TTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPN 541
             + G +  A+   + M  +   + W  ++     YG   +G+ A E   +M   P  P 
Sbjct: 360 LGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNPG 417

Query: 542 DITFLCAISACSHSGLVEEG 561
           +   L  +  C+ SG +EE 
Sbjct: 418 NYVLLANM--CTRSGRLEEA 435



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 167/305 (54%), Gaps = 1/305 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++  LI K G        T LV ++ K   +  A RVF+ +P++    +++M+ G+   
Sbjct: 30  QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 89

Query: 117 ASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFA 175
              D AV  F   +R   V P   + + +L  C ++G +  G+++HG ++  G     + 
Sbjct: 90  NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYV 149

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
           M  +++MY KC   +E  K+F  + +RD+V+WN +V GF QN   E A +    M  EG 
Sbjct: 150 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 209

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             D  +  ++L + A++ +L  G A+H   ++ G+   + +  +L+ MYAKCG +  A  
Sbjct: 210 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 269

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF+G++  NV+SW +MI+AY   G   + + +F+ ML +G+EP++VT +  L AC+  G 
Sbjct: 270 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 329

Query: 356 LERGI 360
           +E G+
Sbjct: 330 VEEGL 334



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 173/365 (47%), Gaps = 19/365 (5%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGL 68
           F N+   + +   K  L ++  IP+ +     + +L  C ++  L   R++  +++K GL
Sbjct: 87  FHNNLYDRAVGVFKDVLREKTVIPNEV---SVSSVLSACANMGGLNFGRQVHGVVVKFGL 143

Query: 69  CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
                    L+ ++ K     +  ++F+ + D+    ++ ++ G+ +    ++A ++   
Sbjct: 144 VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWV 203

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           MR + + P   +++ +L     +  + +G  IH Q+I  G+  ++  +  ++ MYAKCG 
Sbjct: 204 MRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGS 263

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           + +AY++F+ + + +++SW  +++ +  +G A   ++L   M  EG     +T V +L A
Sbjct: 264 LVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 323

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMKSRNVV 306
            ++ G +  G A H  +M+   D          +VD+  + G ++ A+   + M  +   
Sbjct: 324 CSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTP 382

Query: 307 S-WNSMIAAYVEGGN----PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
           S W +++ A  + GN     E A R+F+    +   P N  ++  +  C   G LE    
Sbjct: 383 SVWGALLGACRKYGNLKMGREAAERLFEM---EPYNPGNYVLLANM--CTRSGRLEEANE 437

Query: 362 VHKLL 366
           V +L+
Sbjct: 438 VRRLM 442


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/576 (39%), Positives = 345/576 (59%), Gaps = 1/576 (0%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D   I   L   A   SL +GK+ HG A+  G  +       L+++Y KCGR + ARLVF
Sbjct: 56  DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  R++VSWN+MIA Y   G   +A+++F +M  +G   +  T+   + ACA    + 
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
               +H +  +L L ++  +  +++ +Y+KC  +  A  +F K+  +TLV+W+++  GY 
Sbjct: 176 ECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYV 235

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           QNG   EAL+ F   + + ++   FT+ +++ A A L++      +HA++++  F  N F
Sbjct: 236 QNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFF 295

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           V  +L+D+YA+CG +  A ALF  M  ++V  WN MI  +  H     A+ LF KM +  
Sbjct: 296 VAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLG 355

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN++T+L  +S CSH+GLVE+G HYF+ L  D  +EP + HY  MVD+LGR+G+ +EA
Sbjct: 356 IFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEA 415

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           W+ + KMP EP  +++G++LG+C+ + N+ L   AA +LF+L+PD GG HVLL+N+YAA+
Sbjct: 416 WELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAAS 475

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             W+ +   R  ++  G +K  G S +E K +VH F  G  KHP+   IY  LE +  E+
Sbjct: 476 GNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEM 535

Query: 718 -KAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
            K A        +HDV    +E LL  HSEKLA++FGL++      I I KNLR+CGDCH
Sbjct: 536 RKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCH 595

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +  K  + +T R +IVRD +RFH FK+G CSCGD+W
Sbjct: 596 SFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 1/359 (0%)

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L++C     +  GK  HG  I  G   D      ++N+Y KCG+ + A  +FD M  R +
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSWNT++AG+  +G    AL L +RMH EG      T+ S + A A   ++   K +H  
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A++   DS   V TA++D+YAKC  ++ A  VF+ M  R +V+W+S+ A YV+ G  EEA
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F+    +GVE T  T+   L ACA L     GI +H ++ +     +  +  SL+ +
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y++C ++++A  +F+ ++ K +V WNAMI  ++++    EA+  F KM+   I P+  T 
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 445 VSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +SV+   +   ++   +   +L++     E NV   + ++D+  + G    A  L + M
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 185/377 (49%), Gaps = 4/377 (1%)

Query: 47  LEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L++C   K L   +    L I  GL    L    L++L+ K      A  VF+ +  +  
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             ++TM+ GY        A+    RM  +      +  +  +  C     I   K++H  
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
            +      + F  T ++++YAKC  I++A  +F++MPER LV+W+++ AG+ QNG  E A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L L      EG      T+ +IL A A++     G  +H   ++ GF     V+ +LVD+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YA+CG++E A  +F  M+ +NVV WN+MIA++    +  EAM +F+KM   G+ P  VT 
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363

Query: 344 MEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +  L  C+  G +E+G  +   L+    +  +V   + ++ +  +  K D A ++ +K+ 
Sbjct: 364 LSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423

Query: 403 GKTLVSWNAMILGYAQN 419
            +   S    +LG  +N
Sbjct: 424 FEPTASMWGSLLGSCRN 440


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/696 (36%), Positives = 400/696 (57%), Gaps = 37/696 (5%)

Query: 129 MRYDDVAPVVYNYTYLLKVCG---DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
           M  D   P    +T LL+ C    +  +  R  EI  +++  GF  D+   T +++  A+
Sbjct: 1   MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG +E A + FDR+P +++VSWN+++A   ++G    AL++  RM  EG +   I+ +  
Sbjct: 61  CGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA 120

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L + + +  L  GK++H      GFD+ V V  ALV+MY+KC R++ AR  F+ + S++V
Sbjct: 121 LCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDV 180

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VSWNSMIAA+ + G  +EA+  +++M+ ++ +EPT +T++ AL A   L    R     K
Sbjct: 181 VSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSL----RSAGDTK 236

Query: 365 LL--DQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           LL  D ++LG   D+ + ++L+S   KC  +D+A  +F +++ + +VSW+ +I   A++G
Sbjct: 237 LLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHG 296

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           R  +A+  F +M    I+P+  T++SV+ A A    I   +  HA V    FE    V  
Sbjct: 297 RGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVAN 356

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL++MY KCG +G+AR +FD M  R+V +W  M+ GY  HG  + A  +F  M     +P
Sbjct: 357 ALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQP 416

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N ITF+  +  CSH+G+V +G+  F  +  D+GI PV +HYG ++DLLGRAG L EA + 
Sbjct: 417 NVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEEL 476

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD-PDEGGYHVLLANIYAAASM 659
           ++ MP+EP    + ++LGACK+H + +  ++ A    +L  P     +VLL+N+Y     
Sbjct: 477 LRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMY----- 531

Query: 660 WDKLAKVRTIMEKKGLQKTPGC-SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE-- 716
                   T  E++   +   C SL+E+K  VH F +G   HP+ + I   L+ L +E  
Sbjct: 532 --------TDEEQQSDPEEDQCSSLIEVKGRVHEFVAGDWSHPRIEEIVAELQRLQEEMM 583

Query: 717 -IKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
            ++ +    +       E  VQEN    HS KLAIAFG+L S  GS+I++    R+C +C
Sbjct: 584 ILRGSSLCEEGGQ----EGSVQEN---EHSLKLAIAFGVLASLQGSSINVVNTRRICVEC 636

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           H+A K IS + GR+I+VRD +RFH  + GVCSCGDY
Sbjct: 637 HDAAKVISKIAGRKIVVRDSYRFHHIEQGVCSCGDY 672



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 234/484 (48%), Gaps = 9/484 (1%)

Query: 46  LLEVCTSLKE------LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           LLE C    E      L  I   ++ +G        T L+S   +   L  A   F+ IP
Sbjct: 16  LLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAFDRIP 75

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    +++M+    +      A+    RM  + V P   +Y + L  C  + ++ +GK 
Sbjct: 76  AKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKS 135

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH ++  +GF   +F    +VNMY+KC +++ A + F+R+  +D+VSWN+++A  +Q G 
Sbjct: 136 IHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGG 195

Query: 220 AELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           ++ AL+   RM  EE      IT+V  L A  ++ S    K +   A+R G +  + V +
Sbjct: 196 SDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGS 255

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV    KCG ++ AR VFD M+ RNVVSW+ +IAA  E G   +A+ +F +M   G++P
Sbjct: 256 ALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQP 315

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             VT++  L ACA  G +  G   H  +       + ++ N+L++MY KC  +  A  +F
Sbjct: 316 NEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVF 375

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             +  + +VSW AM+ GYA +G   EA   F  M  + I+P+  T VSV+   +   V+ 
Sbjct: 376 DAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVS 435

Query: 459 YA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
              +  H +V              +ID+  + G +  A  L   M  E     WN ++  
Sbjct: 436 DGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGA 495

Query: 517 YGTH 520
              H
Sbjct: 496 CKVH 499


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/805 (32%), Positives = 421/805 (52%), Gaps = 85/805 (10%)

Query: 57  RRILP----LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLDALYHTM 109
           RR+ P    L +++GL         LV L  +       AR+     +   K   L++  
Sbjct: 68  RRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKH 127

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG------- 162
           +   A+    D+A++    M+   V    Y    +L  CG  G +R G+ +H        
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187

Query: 163 --QLIVNGFSLDLFA----------------------MTGVVNMYAKCGQIEEAYKMFDR 198
               +V GF   ++A                         VV   A+ G +++A ++  R
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247

Query: 199 M----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           M    PE ++ +WNT+++G +++G    AL +V  M ++G R D  T+ S+L +VAN G 
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGL 307

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G  +H + +R   +  V   TALVDMYAKCGR++ A+ V D ++ RN+ +WNS++A 
Sbjct: 308 LRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAG 367

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  + A+ + + M    ++P                                   D
Sbjct: 368 YANAGRFDIALELVELMKKNRLDP-----------------------------------D 392

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGYAQNGRVNEALNYFC 430
           ++  N LI+ YS   +  +A  +  +++       +VSW ++I G   NG   ++  YFC
Sbjct: 393 ITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSF-YFC 451

Query: 431 -KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M+   ++P   TM  ++ A A L++ +  K +H   +R  ++ ++ V TALIDMY+K 
Sbjct: 452 HEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKG 511

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++ +A+ +F+ + ++++   N M+ G   HG G+ A+ELF+ M     KP+ ITF   +
Sbjct: 512 GSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALL 571

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +AC   GLV EG  YF S++  YG++P  ++Y  MVDLL R G L+EA DFI++ PI+PG
Sbjct: 572 TACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPG 631

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            + +GA+L  C IH N+ L E AA  LF L+P     ++L+ N+Y    M+D+   ++  
Sbjct: 632 ASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYA 691

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+ +G+   PG S ++++  +H F      HP++  IY  L  L+ +IK AGYVPDT+ I
Sbjct: 692 MKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCI 751

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG-STIHIRKNLRVCGDCHNATKYISLVTG 787
            ++V++  +E LL  H+EKLAI +GL+ S    + + + KN R+C DCH   K+IS +  
Sbjct: 752 AYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCD 811

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           R+II+RD  RFH F +G CSC DYW
Sbjct: 812 RQIILRDAVRFHHFVDGKCSCNDYW 836


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/762 (31%), Positives = 414/762 (54%), Gaps = 20/762 (2%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           P+  LL  C ++   + I P+I  SG     + +  +V     +  L++A  +FE  P +
Sbjct: 13  PTCSLLPGCIAVDLQKNINPIISASGPYKGCMSKGNVVG---GWVDLNNACILFEKTPKR 69

Query: 102 LDALYHTMLKGYAKFASLDDA------VSFLIRMRYDDVA-----PVVYNYTYLLKVCGD 150
           +       +    +    DD         F  R     V      P        L  CG 
Sbjct: 70  IG----VSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVFSALSFCGR 125

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
            G +  G+  H  ++  G   D F  T +++MYAKCG+++ A +++D+M   D  + N +
Sbjct: 126 EGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCL 185

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++ +A+NGF   A  +  ++   G R +  T  ++L     + +++ GK +H + ++  +
Sbjct: 186 ISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQY 245

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
            S   V  AL+ +Y+KCG +E A +VF+ ++ RN++SW + I  + + G+ ++A++ F  
Sbjct: 246 LSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSM 305

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M + G+EP   T    L +C  + D   G   H  + +  + + V +  ++I MYS   +
Sbjct: 306 MRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGE 365

Query: 391 VDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
           +D A   F ++ +  + VSWNA+I GY  N ++ +A+  FC+M  +++  + FT  ++  
Sbjct: 366 MDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFK 425

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
           A +    +     IH+ +I+S  E N+ V ++LI+ Y +CG++  A  +F  +++  V +
Sbjct: 426 ACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVS 485

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLK 569
           WN +I  Y  +G    A+ L  KM+E   KP   TFL  +SACSHSGLV+EG  +F S+ 
Sbjct: 486 WNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMV 545

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
           +DY I+P   H   MVD+LGRAG+L  A DFI+K+ ++P  +++  +L AC+ + N+++ 
Sbjct: 546 QDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMA 605

Query: 630 EKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNE 689
           E  A ++ +L+P++   +V L+N+YA    W      R +ME+K + K PGCS +E+ N+
Sbjct: 606 EYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNK 665

Query: 690 VHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKL 748
           ++ F+S    HP+  ++Y  L+ L+ +I+  GY P T ++ H      +E L+  HSEKL
Sbjct: 666 MYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKL 725

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           A+ FGLL+  PG  I + KNLRVC DC++  KYIS +T R I
Sbjct: 726 AVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/530 (36%), Positives = 303/530 (57%), Gaps = 31/530 (5%)

Query: 156  RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            RG+ +H  L++ G +   +    +++ Y +CGQ+  A K+FD++P  ++  W  +    A
Sbjct: 821  RGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACA 880

Query: 216  QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
            + GF E AL   + M +EG R +   + SIL A  ++   R G+ +H   ++  F+S   
Sbjct: 881  RRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAY 940

Query: 276  VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
            + +AL+ MY+KCG VE A  VFD +  +++V  N+M++ Y + G   EA+ + QKM   G
Sbjct: 941  IISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAG 1000

Query: 336  VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
            V+P  V+    +   + +GD      V +L+    +  DV                    
Sbjct: 1001 VKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV-------------------- 1040

Query: 396  DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
                       VSW ++I G+ QN   +E  + F +M  +   P S T+ S++PA   ++
Sbjct: 1041 -----------VSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVA 1089

Query: 456  VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
             +R+ K IH   +    EK+V+V +AL+DMYAKCG +  A+ LF MM ER+  TWN +I 
Sbjct: 1090 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIF 1149

Query: 516  GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
            GY  HG    A+ELFN+M E  TK + +TF   ++ACSH+G+VE G   F  +++ Y IE
Sbjct: 1150 GYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIE 1209

Query: 576  PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
            P ++HY  MVDLLGRAG+L+EA+D I+ MP+EP   V+GA+LGAC+ H N+EL E AA  
Sbjct: 1210 PRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEH 1269

Query: 636  LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
            LFEL+P+  G  +LL+N+YA A  W   AK++ +M+++   K PGCS +E
Sbjct: 1270 LFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 236/477 (49%), Gaps = 37/477 (7%)

Query: 67   GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFL 126
            GL     F  KL+S + +   LS+A ++F+ IP+     +  +    A+    ++A+S  
Sbjct: 833  GLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAF 892

Query: 127  IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
              M+ + + P  +    +LK CG + + R G+ +H  ++ N F  D + ++ ++ MY+KC
Sbjct: 893  SEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKC 952

Query: 187  GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
            G +E+A ++FD + ++DLV  N +V+G+AQ+GF   ALBLV +M + G + + ++  +++
Sbjct: 953  GHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLI 1012

Query: 247  PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
                                 AGF  + + S     M ++  R+ TA  V       +VV
Sbjct: 1013 ---------------------AGFSQVGDKS-----MVSEVFRLMTANGV-----EPDVV 1041

Query: 307  SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
            SW S+I+ +V+  +  E    F++MLDQG  P++VTI   L AC ++ +L  G  +H   
Sbjct: 1042 SWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYA 1101

Query: 367  DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
              + +  DV + ++L+ MY+KC  +  A  +F  +  +  V+WN++I GYA +G  NEA+
Sbjct: 1102 MVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAI 1161

Query: 427  NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA-LVIRSCFEKNVFVMTALIDM 485
              F +M   + K D  T  +V+ A +   ++   + +   +  +   E  +     ++D+
Sbjct: 1162 ELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDL 1221

Query: 486  YAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVE-LFNKMLEGP 537
              + G +  A  L   M  E     W  ++     HG   L + A E LF    E P
Sbjct: 1222 LGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESP 1278



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 35/360 (9%)

Query: 46   LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
            +L+ C  L + R    +  +I+K+         + L+ ++ K   +  A RVF+ I DK 
Sbjct: 910  ILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKD 969

Query: 103  DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + + M+ GYA+   + +A+  + +M+   V P V ++  L+     VG+     E+  
Sbjct: 970  LVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFR 1029

Query: 163  QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  NG   D                               +VSW ++++GF QN     
Sbjct: 1030 LMTANGVEPD-------------------------------VVSWTSVISGFVQNFHNHE 1058

Query: 223  ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
              D    M ++G     +TI S+LPA  NV +LR GK +HGYAM  G +  V V +ALVD
Sbjct: 1059 GFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVD 1118

Query: 283  MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            MYAKCG +  A+++F  M  RN V+WNS+I  Y   G   EA+ +F +M +   +  ++T
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 1178

Query: 343  IMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
                L+AC+  G +E G     K+ ++ ++   +     ++ +  +  K+  A D+   +
Sbjct: 1179 FTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAM 1238



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 159/329 (48%), Gaps = 24/329 (7%)

Query: 356  LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            L RG  +H  L  + L         L+S Y++C ++  A  +F K+    +  W  +   
Sbjct: 819  LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 878

Query: 416  YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
             A+ G   EAL+ F +M+ + ++P+ F + S++ A   LS  R  + +H +++++ FE +
Sbjct: 879  CARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 938

Query: 476  VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             ++++ALI MY+KCG V  A  +FD + ++ +   N M+ GY  HG    A++L  KM +
Sbjct: 939  AYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQ 998

Query: 536  GPTKPNDITFLCAISACSHSG---LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
               KPN +++   I+  S  G   +V E     T+     G+EP +  + +++    +  
Sbjct: 999  AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTA----NGVEPDVVSWTSVISGFVQNF 1054

Query: 593  RLNEAWDFIQKMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
              +E +D  ++M  +   P      ++L AC    N+  G++             GY ++
Sbjct: 1055 HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIH-----------GYAMV 1103

Query: 650  LA---NIYAAASMWDKLAKVRTIMEKKGL 675
            +    ++Y  +++ D  AK   I E K L
Sbjct: 1104 IGVEKDVYVRSALVDMYAKCGYISEAKIL 1132



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 133/712 (18%), Positives = 250/712 (35%), Gaps = 152/712 (21%)

Query: 44   ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
            +++L  C  +K+    R     +IK G+       T ++ ++     + +A + F+ +  
Sbjct: 319  SIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGR 378

Query: 101  KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
                + ++ ++ GY     ++ A+    RM  +DVA   + Y+ + K C     +    +
Sbjct: 379  AASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQ 438

Query: 160  IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS------------- 206
            IH +LI +    +L   + ++  Y +CG +E A ++F ++ + D+VS             
Sbjct: 439  IHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGD 498

Query: 207  -WNTIV--------------------------AGFAQNG---FAELALDLVTRMHEE--- 233
             W  I                           +G  Q G   F  +  D   +  E    
Sbjct: 499  PWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCS 558

Query: 234  ------GRRG------DFITIVSILPAVAN----VGSLRIGKAVH--GYAMRAGFDSIVN 275
                  GR G      DFI  +++ P  +     + + R    +    Y      D   N
Sbjct: 559  CMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPN 618

Query: 276  VSTALV---DMYAKCGRVETARLVFDGMKSRNV-----VSW----NSMIAAYVEGGNPEE 323
             +T  V   +MYA+ GR   A      M+ + +      SW    N M   +       E
Sbjct: 619  DATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPE 678

Query: 324  AMRIFQKM-------LDQGVEPTNVTIM----------------EALHACADLGDLERGI 360
              ++++K+        D G  P   T++                E L  C  L  L  G 
Sbjct: 679  MPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGK 738

Query: 361  FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
             + ++L  L++  D          YS  K + R  D +         +  ++I       
Sbjct: 739  PI-RVLKNLRVCLDC---------YSTMKYISRITDRYIPTPLAAAAAMQSLI------N 782

Query: 421  RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
            R N    Y      +  +  S T    I   A    +   + +HA ++     +  +   
Sbjct: 783  RANVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAA 842

Query: 481  ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
             L+  Y +CG +  AR LFD +   ++  W V+       G  + A+  F++M +   +P
Sbjct: 843  KLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRP 902

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKD------YGIEPVMDHYG------------ 582
            N       + AC H      G +  T + K+      Y I  ++  Y             
Sbjct: 903  NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 962

Query: 583  ------------AMVDLLGRAGRLNEAWDFIQKMP---IEPGITVFGAMLGA 619
                        AMV    + G ++EA B +QKM    ++P +  +  ++  
Sbjct: 963  DWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAG 1014


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/584 (41%), Positives = 337/584 (57%), Gaps = 64/584 (10%)

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACA 351
           AR VFD + S +   WN+MI AY+   NP+E+M +F +M  Q   P +  ++   + AC 
Sbjct: 57  ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK------------------------ 387
            L D   G  +H  + ++ LG+D+ +  +LI MY+K                        
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176

Query: 388 -------CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV------------------ 422
                    +++ A D+F ++  + LVSWN MI G+A  G V                  
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236

Query: 423 -------------NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
                        NEAL  F +M+  N+ PD  TMVSV+ A  ++  +   K IH  + R
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
           +  E ++ + T+L+DMYAKCG +  +  +F+ MN R V  W+ MI G   HG G+ A++ 
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F+KM+    KPND+TF+  +SACSH GLV+EG  YFTS+ K Y + P ++HYG +VD+LG
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAGRL EA + I+ MP  P   V+ A+LGAC+I+KNVE+ E+A   L EL+P   G +VL
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIY+ A  WDK+  VR +M+   +QK PG S +E+ N VH F +G   HP+SK+I   
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L  +   +KA GY P T S+  D ++  +EN L+ HSEKLAIAFGLL+++PGSTI I KN
Sbjct: 537 LSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKN 596

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVC DCH A K IS    R IIVRD +RFH F NG CSC DYW
Sbjct: 597 LRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 66/380 (17%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD---AARVFEPIPDKL 102
           LL+  T L ++ +I  LIIK+ L   +    KL+      +S +D   A  VF+ IP   
Sbjct: 9   LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPD 68

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIH 161
             +++TM++ Y    +  +++S   +MR+ +  P+  Y+ + +++ CG + +   G+++H
Sbjct: 69  TFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLH 128

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIE------------------------------- 190
            Q++  G   DLF  T ++ MYAK G IE                               
Sbjct: 129 TQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEIN 188

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE--------------EGRR 236
            A+ +FDRMPERDLVSWNT++ G A  G    A  L  R  E              + R+
Sbjct: 189 LAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQ 248

Query: 237 G-----------------DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
                             D +T+VS+L A  +VG+L +GK +H    R   +  + + T+
Sbjct: 249 SNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTS 308

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           LVDMYAKCG ++ +  VF+GM +R+V +W++MI      G  E A+  F KM+ + ++P 
Sbjct: 309 LVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPN 368

Query: 340 NVTIMEALHACADLGDLERG 359
           +VT +  L AC+ +G ++ G
Sbjct: 369 DVTFIGVLSACSHIGLVDEG 388



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 12/231 (5%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A ++F+   ++    + +M+  YAK    ++A+     M+  +V P       +L  CGD
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
           VG +  GK IH  +  N   +DL   T +V+MYAKCG I+ + ++F+ M  RD+ +W+ +
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           + G A +GF ELALD  ++M  E  + + +T + +L A +++G +       G+      
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVD-----EGWTYFTSM 395

Query: 271 DSIVNVSTAL------VDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAA 314
             + +VS  +      VD+  + GR++ A  +   M  + + + W +++ A
Sbjct: 396 SKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 2/140 (1%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T LV ++ K   + ++ RVF  + ++    +  M+ G A     + A+    +M  +D+ 
Sbjct: 307 TSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIK 366

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           P    +  +L  C  +G +  G      +  V   S  +     VV++  + G+++EA +
Sbjct: 367 PNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAME 426

Query: 195 MFDRMP-ERDLVSWNTIVAG 213
           +   MP   D + W  ++  
Sbjct: 427 LIKSMPFAPDAIVWRALLGA 446


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/792 (33%), Positives = 404/792 (51%), Gaps = 112/792 (14%)

Query: 133 DVAPVVYNYTYLLKVC--GDVGEIRRGKEIHGQLIVNGFSL------------------- 171
           DV  +   Y   L +C   ++      + +HG +I +GF L                   
Sbjct: 6   DVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFV 65

Query: 172 ------------DLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQN 217
                       D+ A T ++  Y+  G ++ A ++F+  P   RD V +N ++ G++  
Sbjct: 66  YARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHM 125

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNV 276
                A++L   M     + D  T  S+L A   +    R    +HG  ++ G +    V
Sbjct: 126 NDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAV 185

Query: 277 STALVDMYAKCGR---------VETARLVFDGMKSRNV---------------------- 305
             AL+ +Y KC           + +AR +FD M  RN                       
Sbjct: 186 LNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREI 245

Query: 306 ---------VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                    ++WN+MI+ Y+  G  E+A+ +F+KM   GV+    T    + ACAD G  
Sbjct: 246 LDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFF 305

Query: 357 ERGIFVHKLLDQLKLGTD----VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
             G  VH  + + +L  D    +S+ N+LI++Y K  KVD A  IF ++  K +++WN +
Sbjct: 306 LLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTL 365

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNI-------------------------------KPDS 441
           + GY   GR+ EA ++F +M  KN+                               +P+ 
Sbjct: 366 LSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPND 425

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           +     I A + L  +   + +HA ++    +  + V  A+I MYA+CG V  AR +F  
Sbjct: 426 YAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLT 485

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M      +WN MI   G HG G  A+EL+ +ML+    P+  TFL  +SACSH+GLVEEG
Sbjct: 486 MPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEG 545

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             YF S+ ++YGI P  DHY  M+DL  RAG+ ++A + I  MP E    ++ A+L  C+
Sbjct: 546 NRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCR 605

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
            H N++LG +AA +LF+L P   G +VLL+N+YA+   W+ +A+ R +M  +G++K P C
Sbjct: 606 THGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPAC 665

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S  E++N+VH F    T HP+   IY +LE L  E+K  GY+PDT  + HD+E   +E  
Sbjct: 666 SWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYA 725

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           LS+HSEKLA+AFGL+    G+T+ + KNLR+CGDCHNA K++S V GREI+VRD  RFH 
Sbjct: 726 LSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHH 785

Query: 801 FKNGVCSCGDYW 812
           FKNG CSC +YW
Sbjct: 786 FKNGECSCRNYW 797



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 243/543 (44%), Gaps = 83/543 (15%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIP-DKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +T L++ +    +L  A  +F   P D  D + Y+ M+ GY+       A+     MR+ 
Sbjct: 82  RTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWA 141

Query: 133 DVAPVVYNYTYLLKVCGDVG-EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG---- 187
           +  P  + +  +L     +  + R+  ++HG ++  G  +    +  ++++Y KC     
Sbjct: 142 NFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPL 201

Query: 188 -----QIEEAYKMFDRMPER----------------DL---------------VSWNTIV 211
                 +  A K+FD MP+R                DL               ++WN ++
Sbjct: 202 VSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMI 261

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF- 270
           +G+  +G  E AL L  +M   G + D  T  S++ A A+ G   +GK VH Y ++    
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELN 321

Query: 271 ---DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE---- 323
              D +++V   L+ +Y K G+V+ AR +F  M  +++++WN++++ YV  G  EE    
Sbjct: 322 PDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSF 381

Query: 324 ---------------------------AMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
                                      A+++F +M   G EP +     A+ AC+ LG L
Sbjct: 382 FAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGAL 441

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
           E G  +H  +  L   + +S+ N++I+MY++C  V+ A  +F  +     VSWN+MI   
Sbjct: 442 ENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAAL 501

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKN 475
            Q+G   +A+  + +M  + I PD  T ++V+ A +   ++    ++ ++++        
Sbjct: 502 GQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPG 561

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFN 531
                 +ID++ + G    A+ + D M  E     W  ++ G  THG   LG  A E   
Sbjct: 562 EDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLF 621

Query: 532 KML 534
           K++
Sbjct: 622 KLI 624


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/700 (32%), Positives = 395/700 (56%), Gaps = 5/700 (0%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A++L+ C+ L++     ++  LI++ G     +  + L+ ++ K   L D+ ++F  IP 
Sbjct: 180 AVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPV 239

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +  ++ G  +       +     M+   +      Y  + + C  +  ++ G ++
Sbjct: 240 KNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQL 299

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +   F  D+   T  ++MYAKCG + +A ++F+ +P+  L  +N I+ G  +N   
Sbjct: 300 HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKG 359

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL     + + G   + I++     A A++     G+ +H  ++++   S + V+ ++
Sbjct: 360 FEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSI 419

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMY KC  +  A  +FD M+ R+ VSWN++IAA+ + GN EE + +F  ML   +EP  
Sbjct: 420 LDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQ 479

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T    L AC+    L  G+ +H  + +  LG D  +  +LI MY KC  ++ A  I  +
Sbjct: 480 FTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDR 539

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ +T+VSWNA+I G+       +A ++F +M   ++KPD+FT   V+ A A L+ +   
Sbjct: 540 IEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLG 599

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +I+     +V++ + L+DMY+KCG +  +  +F+    +   TWN MI GY  H
Sbjct: 600 KQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQH 659

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           GLG+ A+  F +M     +PN  TF+  + AC+H G +++G+HYF ++  +YG+EP ++H
Sbjct: 660 GLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEH 719

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  M+D++GR+GR++EA   IQ+MP E    ++  +L  CKIH N+E+ EKA N + +L+
Sbjct: 720 YSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLE 779

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P++    +LL+NIYA A MW K++++R +M    L+K PGCS +E+K+EVH+F  G+  H
Sbjct: 780 PEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTH 839

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSIHD--VEDYVQE 738
           P+ + IY  L  L+DE+K  GY+PD + + D   E+Y Q+
Sbjct: 840 PRYEEIYKILSVLLDEMKWIGYIPDIDFLIDEESEEYEQK 879



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 182/659 (27%), Positives = 322/659 (48%), Gaps = 49/659 (7%)

Query: 9   LSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGL 68
           L +FT  T + TL +++  L  +    S I +  S        SLK  ++    +I SG 
Sbjct: 21  LRIFTFCTIS-TLQQNQTKLPTKIRTFSHIIQECSDY-----NSLKPGKQAHARMIVSGF 74

Query: 69  CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD-------- 120
                    L+ ++ + + L+ A +VFE +  +    Y+TM+ GYA    ++        
Sbjct: 75  IPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYD 134

Query: 121 ----DAVS--------------------FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
               D VS                    FL   R ++V      +  +LK C  + +   
Sbjct: 135 TPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGL 194

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G ++HG ++  GF  D+   + +++MYAKC +++++ K+F  +P ++ V W+ I+AG  Q
Sbjct: 195 GIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQ 254

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N    L L+L   M + G         S+  + A + +L++G  +H +A++  F S + V
Sbjct: 255 NDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITV 314

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TA +DMYAKCG +  A+ +F+ +   ++  +N++I   V      EA++ FQ +L  G+
Sbjct: 315 GTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGL 374

Query: 337 EPTNVTIMEALHACADL-GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
               +++  A  ACA + GDL+ G  +H L  +  L +++ + NS++ MY KC+ +  A 
Sbjct: 375 GFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEAC 433

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F +++ +  VSWNA+I  + QNG   E LN F  M    ++PD FT  SV+ A +   
Sbjct: 434 CMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +     IH  +I+S    + FV  ALIDMY KCG +  A+ + D + ++ + +WN +I 
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G+      + A   F +ML+   KP++ T+   + AC++   V  G      + K   +E
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIK---LE 610

Query: 576 PVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
              D Y    +VD+  + G + ++    +K P +  +T + AM+     H    LGE+A
Sbjct: 611 LHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVT-WNAMICGYAQHG---LGEEA 665


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/670 (36%), Positives = 381/670 (56%), Gaps = 26/670 (3%)

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
           G +G + R ++I   +       D F+   ++++YA+ G +  A  +FDRMP   L SW 
Sbjct: 3   GRLGCVERARQIFDAIA----DRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWT 58

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            +++ FA +G  E A  L   M E     D I    +L  +A   ++   K    Y    
Sbjct: 59  ALLSAFALSGHHEEAKTLFDTMQER----DLIAWTIMLTVLATFSNIEDAK----YHFDQ 110

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
             +  +   TA++   A+ G++E AR  FD M  RN+ SW S+++AY   G+ + A R+F
Sbjct: 111 MPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVF 170

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
             M +  +    V     L   +  GD+ R     +  D +    D+    +++S Y+  
Sbjct: 171 DSMPEWNL----VAWTAMLTGYSLSGDVVRA---KRAFDSMP-ERDLIAWTAMLSAYAFN 222

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-----SKNIKPDSFT 443
             +    +IF ++  + L+SW  M+    +N  + E+   F +M      SK + P+  T
Sbjct: 223 GHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVT 282

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
            ++++ A + L  +   + IHA V    F+ ++ V  AL++ Y +CGA+G A+ +FD M 
Sbjct: 283 FITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMR 342

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            R V +W+ MI  +   G    A+EL+++ML   T P+DI F+  + ACS+SG+VE    
Sbjct: 343 RRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGD 402

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           +F S+  D  +EP ++HY  MVD+LGRAG+L +A D ++ MP  PG  ++  ML ACK++
Sbjct: 403 FFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLY 462

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
            +VE GE AA  +FELDP+    ++ LANIY+AA      A++R +ME++G++K PGCS 
Sbjct: 463 TDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSW 522

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLS 742
           +E+ + VH F +G   HPQ   IY  ++ L  ++K AGY  DT  +  DVE+  +ENLL 
Sbjct: 523 IEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLW 582

Query: 743 SHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFK 802
            HSEKLAIAFGL+++ PG+ + I KNLRVC DCH ATK IS VTGREI+VRD +RFH F+
Sbjct: 583 YHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQ 642

Query: 803 NGVCSCGDYW 812
           NG+CSC DYW
Sbjct: 643 NGMCSCNDYW 652



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 215/452 (47%), Gaps = 39/452 (8%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVY 139
           +F +   +  A ++F+ I D+    +  ML  YA+   L +A     RM R+      + 
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWS-----LG 55

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           ++T LL      G     K +   +       DL A T ++ + A    IE+A   FD+M
Sbjct: 56  SWTALLSAFALSGHHEEAKTLFDTMQ----ERDLIAWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE------------GRRGDFITIVSILP 247
           PERDLV+W  ++A  A+ G  E A +   +M E             GR GD      +  
Sbjct: 112 PERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFD 171

Query: 248 AVANVG-----SLRIGKAVHGYAMRA--GFDSIVN----VSTALVDMYAKCGRVETARLV 296
           ++         ++  G ++ G  +RA   FDS+        TA++  YA  G +   R +
Sbjct: 172 SMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREI 231

Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-----LDQGVEPTNVTIMEALHACA 351
           F  M  R+++SW +M+AA VE    EE+  +F +M     L +G+ P  VT +  L AC+
Sbjct: 232 FQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACS 291

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            LG L  G  +H  + +    TD+ ++N+L++ Y +C  +  A  +F  ++ + ++SW++
Sbjct: 292 FLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSS 351

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRS 470
           MI  +AQ GRV+EA+  + +M S+   PD    +SV+ A +   V+  +  +  ++V  +
Sbjct: 352 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 411

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
             E  +     ++D+  + G +  A  L  +M
Sbjct: 412 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLM 443



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 168/336 (50%), Gaps = 46/336 (13%)

Query: 70  DQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
           +++LF  T L+S + +   +  A RVF+ +P+     +  ML GY+              
Sbjct: 144 ERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYS-------------- 189

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
                             + GDV   +R  +   +        DL A T +++ YA  G 
Sbjct: 190 ------------------LSGDVVRAKRAFDSMPE-------RDLIAWTAMLSAYAFNGH 224

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-----EGRRGDFITIV 243
           +    ++F RMPERDL+SW T+VA   +N   E + +L  RM       +G   + +T +
Sbjct: 225 LRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFI 284

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++L A + +G+L  G+ +H      GFD+ + VS ALV+ Y +CG +  A++VFDGM+ R
Sbjct: 285 TLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRR 344

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE-RGIFV 362
           +V+SW+SMI+A+ + G  +EAM ++ +ML +G  P ++  +  L AC++ G +E  G F 
Sbjct: 345 DVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFF 404

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             ++   ++   +     ++ +  +  K+  A D+ 
Sbjct: 405 RSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLL 440



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 45/347 (12%)

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           M+ + G VE AR +FD +  R+  SW  M++ Y   G+   A  +F +M    +      
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L A A  G  E       L D ++   D+     ++++ +    ++ A   F ++ 
Sbjct: 61  ----LSAFALSGHHEEA---KTLFDTMQ-ERDLIAWTIMLTVLATFSNIEDAKYHFDQMP 112

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-- 460
            + LV+W AM+   A+ G++  A   F +M  +N+    F+  S++ A      ++ A  
Sbjct: 113 ERDLVAWTAMLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAAGR 168

Query: 461 -----------KWIHAL--------VIR------SCFEKNVFVMTALIDMYAKCGAVGTA 495
                       W   L        V+R      S  E+++   TA++  YA  G +   
Sbjct: 169 VFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYT 228

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-----LEGPTKPNDITFLCAIS 550
           R +F  M ER + +W  M+     + L + + ELF++M     L     PN +TF+  + 
Sbjct: 229 REIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLD 288

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           ACS  G + EG     ++  + G +  +    A+V+  GR G L +A
Sbjct: 289 ACSFLGALAEGRKIHAAV-AERGFDTDLVVSNALVNFYGRCGALGDA 334


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/636 (36%), Positives = 366/636 (57%), Gaps = 15/636 (2%)

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           +A ++FD MPER++V+W  +V G+  N    L L++   M E GR     T+ + L A  
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
               + +GK VHGYA++ G +SI ++  +L  +YAK G +++A   F  +  +NV++W +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 311 MIAAYVEGGN-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           MI+A  E     E  M +F  ML  GV P   T+   +  C    DL  G  V     ++
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ----------- 418
              T++ + NS + +Y +  + D A  +F +++  ++++WNAMI GYAQ           
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
             R  +AL  F  ++   +KPD FT  S++   + +  +   + IHA  I+S F  +V V
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            +AL++MY KCG +  A   F  M  R   TW  MI GY  HG  + A++LF +M     
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +PN+ITF+  +SACS++GLVEE  HYF  +KK+Y IEPV+DHYG M+D+  R GR+ +A+
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 510

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            FI++   EP   ++ +++  C+ H N+EL   AA++L EL P     ++LL N+Y +  
Sbjct: 511 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTE 570

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W  +A+VR +M+++ +      S + +K++V+ F +    HPQ+  +Y  LE L+++ K
Sbjct: 571 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK 630

Query: 719 AAGYVPDTNS-IHDVEDYVQE--NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           A GY P  N+ + D ED  +     L  HSE+LA+A GLL + PG+T+ + KN+ +C DC
Sbjct: 631 AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDC 690

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           H++ K  SL+  REIIVRD  R H FK+G CSCGD+
Sbjct: 691 HSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 227/468 (48%), Gaps = 16/468 (3%)

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           DA R+F+ +P++    +  ++ GY   +     +   + M      P  Y     L  C 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
              ++  GK++HG  I  G          + ++YAK G ++ A + F R+PE+++++W T
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 210 IVAGFAQN-GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           +++  A++    EL + L   M  +G   +  T+ S++        L +GK V  ++ + 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE------ 322
           G ++ + V  + + +Y + G  + A  +F+ M+  ++++WN+MI+ Y +  +        
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 323 -----EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
                +A+ IF+ +    ++P   T    L  C+ +  LE+G  +H    +    +DV +
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            ++L++MY+KC  +  A   F ++  +T V+W +MI GY+Q+G+  EA+  F +MR   +
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450

Query: 438 KPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +P+  T VS++ A +   ++  A+ +   +    C E  V     +IDM+ + G V  A 
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 510

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           +       E +   W+ ++ G  +HG  + A    +K+LE   KP  I
Sbjct: 511 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGI 556



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 186/382 (48%), Gaps = 28/382 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFAS-LDDAVSFLIRMRYDDVAP 136
           L SL+ K  SL  A R F  IP+K    + TM+   A+    ++  +S  I M  D V P
Sbjct: 180 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMP 239

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
             +  T ++ +CG   ++  GK++       G   +L      + +Y + G+ +EA ++F
Sbjct: 240 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLF 299

Query: 197 DRMPERDLVSWNTIVAGFAQ-------------NGFAELALDLVTRMHEEGRRGDFITIV 243
           ++M +  +++WN +++G+AQ              GF   AL +   +     + D  T  
Sbjct: 300 EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ--ALTIFRDLKRSVMKPDLFTFS 357

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           SIL   + + +L  G+ +H   +++GF S V V++ALV+MY KCG ++ A   F  M +R
Sbjct: 358 SILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 417

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
             V+W SMI+ Y + G P+EA+++F++M   GV P  +T +  L AC+  G +E      
Sbjct: 418 TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEA---E 474

Query: 364 KLLDQLK----LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYA 417
              D +K    +   V     +I M+ +  +V+ A   F K  G       W++++ G  
Sbjct: 475 HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS-FIKRTGFEPNEAIWSSLVAGCR 533

Query: 418 QNGRVNEALNYFCKMRSKNIKP 439
            +G  N  L ++   +   +KP
Sbjct: 534 SHG--NMELAFYAADKLLELKP 553



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 31/326 (9%)

Query: 69  CDQHL-FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF--ASLDD---- 121
           C+ +L  +   + L+ +     +A R+FE + D     ++ M+ GYA+   ++ DD    
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331

Query: 122 -----AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A++    ++   + P ++ ++ +L VC  +  + +G++IH Q I +GF  D+   
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 391

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +VNMY KCG I++A K F  MP R  V+W ++++G++Q+G  + A+ L   M   G R
Sbjct: 392 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 451

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAG---FDSIVNVSTALVDMYAKCGRVETA 293
            + IT VS+L A +  G   + +A H + M       + +V+    ++DM+ + GRVE A
Sbjct: 452 PNEITFVSLLSACSYAG--LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 294 RLVFDGMK----SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD---QGVEPTNVTIMEA 346
              F  +K      N   W+S++A     GN E A     K+L+   +G+E T + ++  
Sbjct: 510 ---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE-TYILLLNM 565

Query: 347 LHACADLGDLERGIFVHKLLDQLKLG 372
             +     D+ R   V KL+ Q  +G
Sbjct: 566 YISTERWQDVAR---VRKLMKQEDVG 588



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
           A   AR LFD M ER+V TW  ++ GY  +      +E+F +MLE    P+  T    ++
Sbjct: 88  AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 147

Query: 551 ACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           AC  S  V+ G  +H + ++K  YG E +     ++  L  + G L+ A     ++P E 
Sbjct: 148 ACLASCDVDLGKQVHGY-AIK--YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EK 203

Query: 609 GITVFGAMLGAC-KIHKNVELG 629
            +  +  M+ AC +  + VELG
Sbjct: 204 NVITWTTMISACAEDEECVELG 225


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/805 (32%), Positives = 421/805 (52%), Gaps = 85/805 (10%)

Query: 57  RRILP----LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLDALYHTM 109
           RR+ P    L +++GL         LV L  +       AR+     +   K   L++  
Sbjct: 68  RRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKH 127

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG------- 162
           +   A+    D+A++    M+   V    Y    +L  CG  G +R G+ +H        
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLAL 187

Query: 163 --QLIVNGFSLDLFA----------------------MTGVVNMYAKCGQIEEAYKMFDR 198
               +V GF   ++A                         VV   A+ G +++A ++  R
Sbjct: 188 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 247

Query: 199 M----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           M    PE ++ +WNT+++G +++G    AL +V  M ++G R D  T+ S+L +VAN G 
Sbjct: 248 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGL 307

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G  +H + +R   +  V   TALVDMYAKCGR++ A+ V D ++ RN+ +WNS++A 
Sbjct: 308 LRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAG 367

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  + A+ + + M    ++P                                   D
Sbjct: 368 YANAGRFDIALELVELMKKNRLDP-----------------------------------D 392

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGYAQNGRVNEALNYFC 430
           ++  N LI+ YS   +  +A  +  +++       +VSW ++I G   NG   ++  YFC
Sbjct: 393 ITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSF-YFC 451

Query: 431 -KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M+   ++P   TM  ++ A A L++ +  K +H   +R  ++ ++ V TALIDMY+K 
Sbjct: 452 HEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKG 511

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++ +A+ +F+ + ++++   N M+ G   HG G+ A+ELF+ M     KP+ ITF   +
Sbjct: 512 GSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALL 571

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +AC   GLV EG  YF S++  YG++P  ++Y  MVDLL R G L+EA DFI++ PI+PG
Sbjct: 572 TACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPG 631

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            + +GA+L  C IH N+ L E AA  LF L+P     ++L+ N+Y    M+D+   ++  
Sbjct: 632 ASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYA 691

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+ +G+   PG S ++++  +H F      HP++  IY  L  L+ +IK AGYVPDT+ I
Sbjct: 692 MKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCI 751

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG-STIHIRKNLRVCGDCHNATKYISLVTG 787
            ++V++  +E LL  H+EKLAI +GL+ S    + + + KN R+C DCH   K+IS +  
Sbjct: 752 AYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCD 811

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           R+II+RD  RFH F +G CSC DYW
Sbjct: 812 RQIILRDAVRFHHFVDGKCSCNDYW 836


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/571 (38%), Positives = 347/571 (60%), Gaps = 3/571 (0%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L    N  ++R G+ VH + ++  +   V +ST L+ +Y KC  +  AR VFD M+ RN
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSW +MI+ Y + G   EA+ +F +ML    EP   T    L +C      E G  +H 
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            + +      + + +SL+ MY+K  ++  A  +F  L  + +VS  A+I GYAQ G   E
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  FC+++ + +  +  T  S++ AL+ L+ + + K +H+ V+R      V +  +LID
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDI 543
           MY+KCG +  AR +F+ M  R V +WN M+ GY  HG G   V+LF  M  E   KP+ +
Sbjct: 256 MYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSV 315

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYG-IEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           TFL  +S CSH GL ++G+  F  +      IE  ++HYG ++DLLGRAGR+ EA++ I+
Sbjct: 316 TFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIK 375

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           KMP EP   ++G++LGAC++H N  +GE    RL E++P+  G +V+L+N+YA+A  W+ 
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWED 435

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
           +  VR +M +K + K PG S +EL   +H+FY+    HP+ + ++  +  L+ + K +GY
Sbjct: 436 VRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGY 495

Query: 723 VPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKY 781
           VPD + + +DV++  +E +L  HSEKLA+AFGL+++S G  + + KNLR+C DCHN  K+
Sbjct: 496 VPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKF 555

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +S V GR++ +RD +RFH    G+CSCGDYW
Sbjct: 556 VSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 179/313 (57%), Gaps = 1/313 (0%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C +   +R G+ +H  +I   +   ++  T ++ +Y KC  +  A  +FD M 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ER++VSW  +++G++Q GFA  AL L  +M       +  T  ++L +        +G+ 
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H +  +  +++ + V ++L+DMYAK GR+  AR VF+ +  R+VVS  ++I+ Y + G 
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ +F ++  +G+    VT    L A + L  L+ G  VH  + + +L   V + NS
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IKP 439
           LI MYSKC  ++ A  IF+ +  +T++SWNAM++GY+++G+  E +  F  MR +N +KP
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312

Query: 440 DSFTMVSVIPALA 452
           DS T ++V+   +
Sbjct: 313 DSVTFLAVLSGCS 325



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 210/406 (51%), Gaps = 13/406 (3%)

Query: 45  LLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +LL  C    +++E +R+   +IK+         T+L+ L+ K   L  A  VF+ + ++
Sbjct: 15  MLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRER 74

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               +  M+ GY++     +A+   ++M   D  P  + +  +L  C        G++IH
Sbjct: 75  NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIH 134

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +    +   +F  + +++MYAK G+I EA  +F+ +PERD+VS   I++G+AQ G  E
Sbjct: 135 SHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 194

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL+L  R+  EG   +++T  S+L A++ + +L  GK VH + +R      V +  +L+
Sbjct: 195 EALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLI 254

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTN 340
           DMY+KCG +  AR +F+ M  R V+SWN+M+  Y + G   E +++F+ M ++  V+P +
Sbjct: 255 DMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDS 314

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-----VSMTNSLISMYSKCKKVDRAA 395
           VT +  L  C+  G  ++G+   ++ D++  G D     +     +I +  +  +V+ A 
Sbjct: 315 VTFLAVLSGCSHGGLEDKGL---EMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAF 371

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           ++  K+  +   +    +LG A     N  +  F   R   I+P++
Sbjct: 372 ELIKKMPFEPTAAIWGSLLG-ACRVHSNTNIGEFVGCRLLEIEPEN 416


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/614 (39%), Positives = 380/614 (61%), Gaps = 15/614 (2%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++    + G    AL+L++      +    + I+S      +  SL   + VH + + 
Sbjct: 43  NKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILS----CTHQNSLLDAQRVHRHLLE 98

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            GFD    ++T L++MY+    ++ AR VFD  ++R +  +N++  A    G+ EE + +
Sbjct: 99  NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158

Query: 328 FQKMLDQGVEPTNVTIMEALHACAD----LGDLERGIFVHKLLDQLKLGTD--VSMTNSL 381
           +++M   G+     T    L AC      +  L +G  +H  +  L+ G D  V +  +L
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHI--LRHGYDGYVHIMTTL 216

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKP 439
           + MY+K   V  A+ +F+++  K +VSW+AMI  YA+NG+  EAL  F ++   ++++ P
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCP 276

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +S TMVSV+ A A L+ +   + IH  ++R   +  + V++AL+ MYA+CG +   + +F
Sbjct: 277 NSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVF 336

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D M++R V +WN +I  YG HG GK A+ +F +M     +P+ I+F+  + ACSH+GLV+
Sbjct: 337 DQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           EG   F S+   +GI P ++HY  MVDLLGRA RL EA   I+ M IEPG  V+G++LG+
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C+IH NVEL E+A+ RLF+L+P   G +VLLA+IYA A MWD + +V+ ++E +GLQK P
Sbjct: 457 CRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVP 516

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQE 738
           G S +E+K +++SF S    +P+ ++++  L  L  E+K  GYVP T  + +D++   +E
Sbjct: 517 GRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKE 576

Query: 739 NLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRF 798
            ++  HSEKLA+AFGL+NSS G  I I K+LR+C DCH+ TK+IS    +EI+VRD++RF
Sbjct: 577 RIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRF 636

Query: 799 HCFKNGVCSCGDYW 812
           H F++GVCSCGDYW
Sbjct: 637 HHFRDGVCSCGDYW 650



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 214/373 (57%), Gaps = 10/373 (2%)

Query: 40  RHPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           +H   LL+  CT   SL + +R+   ++++G        TKL++++  ++S+ +A +VF+
Sbjct: 70  QHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFD 129

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD----VG 152
              ++   +Y+ + +  +     ++ ++   RM    +    + YTY+LK C      V 
Sbjct: 130 KTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVS 189

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            + +G+EIH  ++ +G+   +  MT +V+MYAK G +  A  +F++MP +++VSW+ ++A
Sbjct: 190 LLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIA 249

Query: 213 GFAQNGFAELALDLVTRMHEEGRR--GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
            +A+NG A  AL+L   +  E +    + +T+VS+L A A + +L  G+ +HGY +R G 
Sbjct: 250 CYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGL 309

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DSI+ V +ALV MYA+CG++E  + VFD M  R+VVSWNS+I++Y   G  ++A+ IF++
Sbjct: 310 DSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEE 369

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           M   GVEP+ ++ +  L AC+  G ++ G +  + +     +   V     ++ +  +  
Sbjct: 370 MTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRAN 429

Query: 390 KVDRAADIFSKLQ 402
           +++ AA I   ++
Sbjct: 430 RLEEAAKIIENMR 442



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 218/428 (50%), Gaps = 15/428 (3%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  + Y  L+  C     +   + +H  L+ NGF  D F  T ++NMY+    I+ A K+
Sbjct: 68  PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA-VAN--- 251
           FD+   R +  +N +    +  G  E  L++  RM+  G   D  T   +L A VA+   
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           V  L  G+ +H + +R G+D  V++ T LVDMYAK G V  A  VF+ M  +NVVSW++M
Sbjct: 188 VSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAM 247

Query: 312 IAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           IA Y + G   EA+ +F++++   Q + P +VT++  L ACA L  LE+G  +H  + + 
Sbjct: 248 IACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRK 307

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            L + + + ++L++MY++C K++    +F ++  + +VSWN++I  Y  +G   +A+  F
Sbjct: 308 GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF 367

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAK 488
            +M    ++P   + VSV+ A +   ++   K + +++ +      +V     ++D+  +
Sbjct: 368 EEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGR 427

Query: 489 CGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG----LGKAAVELFNKMLEGPTKPNDI 543
              +  A  + + M  E     W  ++     H       +A++ LF+  LE PT   + 
Sbjct: 428 ANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFD--LE-PTNAGNY 484

Query: 544 TFLCAISA 551
             L  I A
Sbjct: 485 VLLADIYA 492



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 143/292 (48%), Gaps = 6/292 (2%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L + R I   I++ G        T LV ++ K+  +S+A+ VF  +P K    +  M+  
Sbjct: 191 LNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIAC 250

Query: 113 YAKFASLDDAVSFL--IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
           YAK     +A+     + +   D+ P       +L+ C  +  + +G+ IHG ++  G  
Sbjct: 251 YAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD 310

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             L  ++ +V MYA+CG++E   ++FD+M +RD+VSWN++++ +  +GF + A+ +   M
Sbjct: 311 SILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM 370

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGR 289
              G     I+ VS+L A ++ G +  GK +      A G    V     +VD+  +  R
Sbjct: 371 TYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANR 430

Query: 290 VETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +E A  + + M+       W S++ +     N E A R   ++ D  +EPTN
Sbjct: 431 LEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFD--LEPTN 480


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/824 (30%), Positives = 437/824 (53%), Gaps = 58/824 (7%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L E C    SL + +++   I KSG   + +  ++L+ ++  +  + +A ++F+ IP   
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEIH 161
            + ++ ++ G          +     M  ++V P    +  +L+ C G     +  ++IH
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
            ++I +GF         ++++Y+K G ++ A  +F+R+  +D VSW  +++G +QNG  +
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+ L  +MH+           S+L A   +   ++G+ +HG+ ++ G  S   V  ALV
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
            +Y++ G +  A  +F  M  R+ +S+NS+I+   + G  + A+++F+KM    ++P  V
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   L ACA +G   +G  +H  + ++ + +D+ +  SL+ +Y KC  ++ A + F   
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + + +V WN M++ Y Q G ++E+   F +M+ + + P+ +T  S++     L  +   +
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            IH  VI+S F+ NV+V + LIDMYAK G + TAR +   + E  V +W  MI GY  H 
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IH---YFTSLKKDYGIEP 576
           L   A++LF +M     + ++I F  AISAC+    + +G  IH   Y +   +D  I  
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN 555

Query: 577 VMDHYGAMVDLLGRAGRLNEA--------------WD----------------------- 599
            +     ++ L  + G + +A              W+                       
Sbjct: 556 ALAS-NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK 614

Query: 600 ----------FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
                     F+ +MPIEP   ++  +L AC +HKN+E+GE AA  L EL+P++   +VL
Sbjct: 615 QLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVL 674

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+N+YA +  WD   + R +M+ +G++K PG S +E+KN +H+F+ G   HP +++IY +
Sbjct: 675 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEY 734

Query: 710 LETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           ++ L +     GYV D  N ++DVE   ++     HSEKLA+AFGLL+ +    I + KN
Sbjct: 735 IDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKN 794

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVC DCHN  K++S ++ R I+VRD +RFH F+ GVCSC DYW
Sbjct: 795 LRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 241/487 (49%), Gaps = 3/487 (0%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           V  Y +L + C + G +   K++H ++  +GF  +    + ++++Y   G+++ A K+FD
Sbjct: 10  VQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA-NVGSLR 256
            +P  ++  WN +++G      A   L L + M  E    D  T  S+L A +      +
Sbjct: 70  DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQ 129

Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           + + +H   +  GF S   V   L+D+Y+K G V+ A+LVF+ +  ++ VSW +MI+   
Sbjct: 130 VTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           + G  +EA+ +F +M    V PT       L AC  +   + G  +H  + +  L ++  
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+L+++YS+   +  A  IFSK+  +  +S+N++I G AQ G  + AL  F KM+   
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +KPD  T+ S++ A A +      K +H+ VI+     ++ +  +L+D+Y KC  + TA 
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
             F      +V  WNVM+  YG  G    +  +F +M      PN  T+   +  C+  G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
            ++ G    T + K  G +  +     ++D+  + G L+ A   +Q++  E  +  + AM
Sbjct: 430 ALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAM 487

Query: 617 LGACKIH 623
           +     H
Sbjct: 488 IAGYTQH 494



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 217/481 (45%), Gaps = 44/481 (9%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M E G R +  T + +     N GSL   K +H    ++GFD    + + L+D+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           V+ A  +FD + S NV  WN +I+  +      + + +F  M+ + V P   T    L A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 350 CA-DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           C+      +    +H  +     G+   + N LI +YSK   VD A  +F +L  K  VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI G +QNGR +EA+  FC+M    + P  +   SV+ A  ++ + +  + +H  ++
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +       FV  AL+ +Y++ G +  A  +F  M+ R   ++N +I G    G    A++
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFT---SLKKDYGIE-PVMDHYG 582
           LF KM     KP+ +T    +SAC+  G   +G  +H +     +  D  IE  ++D Y 
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 583 AMVDL------------------------LGRAGRLNEA-WDFIQKMPIE---PGITVFG 614
              D+                         G+ G L+E+ W F+Q M IE   P    + 
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQ-MQIEGLMPNQYTYP 419

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           ++L  C     ++LGE+   ++      + G+     N+Y  + + D  AK   +   +G
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVI-----KSGFQF---NVYVCSVLIDMYAKHGELDTARG 471

Query: 675 L 675
           +
Sbjct: 472 I 472


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/666 (36%), Positives = 386/666 (57%), Gaps = 13/666 (1%)

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
           GE+  GK IH Q+I      D+     ++  Y KCG++  A +MFD MP R+ VS N ++
Sbjct: 25  GELCTGKAIHAQMI-RAAHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLM 83

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDF----ITIVSILPAVANVGSLRIGKAVHGYAMR 267
           +G+A  G    AL L+       +  DF      + + L A A+V S  +G+  HGYA++
Sbjct: 84  SGYASAGRHSDALALL-------KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVK 136

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +G      V  A++ MY +C  VE A  VF+ +   ++ ++NSMI  +++ G  + ++RI
Sbjct: 137 SGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRI 196

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
            + M+ +  +  +V+ +  L  CA   +L  G  VH    + +L  +V + ++L+ MY K
Sbjct: 197 VRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGK 256

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C     A   F  L  K +VSW A++  Y QN R  +AL  F  +  + ++P+ FT    
Sbjct: 257 CDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVA 316

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + + A L+ ++    + A  +++     + V  AL++MY+K G++  A  +F  M  R V
Sbjct: 317 LNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDV 376

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN +I GY  HGL + A+ +F+ ML     P+ +TF+  + AC+  GLV+EG++Y   
Sbjct: 377 VSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNI 436

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + K+ GI+P  +HY  MV LL RAGRL+EA  FI    I   +  + ++L +C+++KN  
Sbjct: 437 MMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYG 496

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG + A ++ +L P++ G +VLL+N+YA A+ WD + KVR +M ++G++K PG S +++ 
Sbjct: 497 LGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVG 556

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSE 746
           +EVH F S    H    +I   L+ LI +IK  GYVP+   + HDVE   +E  L  HSE
Sbjct: 557 SEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSE 616

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           K+A+AFGL++S  G TI I KNLR+C DCH A K IS+VT R+I+VRD  RFHC  +GVC
Sbjct: 617 KMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVC 676

Query: 807 SCGDYW 812
           SC DYW
Sbjct: 677 SCDDYW 682



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 229/475 (48%), Gaps = 15/475 (3%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
              L++ + K   L  A ++F+ +P +     + ++ GYA      DA++ L   +  D 
Sbjct: 48  HNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALL---KAADF 104

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           +   Y  +  L     V     G++ HG  + +G     +    V++MY +C  +E+A K
Sbjct: 105 SLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVK 164

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F+ +   D+ ++N+++ GF   G  + ++ +V  M  E  + D ++ V++L   A+   
Sbjct: 165 VFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKE 224

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L +G  VH  A++   +  V V +ALVDMY KC     A   F+ +  +NVVSW +++ A
Sbjct: 225 LLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTA 284

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y +    E+A+++F  +  +GV P   T   AL++CA L  L+ G  +     +      
Sbjct: 285 YTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGA 344

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           +S+ N+L++MYSK   +  A  +F  +  + +VSWN++I+GYA +G   EA+  F  M  
Sbjct: 345 LSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLL 404

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALIDMYAKCGAVG 493
             I P   T V V+ A A+L ++    +   ++++    +      T ++ +  + G + 
Sbjct: 405 AEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLD 464

Query: 494 TARALFDMMN--ERHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDI 543
            A   F + N     V  W  ++     Y  +GLG    E   ++     KPND+
Sbjct: 465 EAEQ-FILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQL-----KPNDV 513



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 181/357 (50%), Gaps = 12/357 (3%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +KSGL +       ++ ++C+   + DA +VFE +       +++M+ G+      D ++
Sbjct: 135 VKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSI 194

Query: 124 SFLIRM-----RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
             +  M     ++D V+     Y  +L  C    E+  G ++H Q +      +++  + 
Sbjct: 195 RIVRSMVGEVEQWDHVS-----YVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSA 249

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +V+MY KC    +A+  F+ +PE+++VSW  ++  + QN   E AL L   +  EG R +
Sbjct: 250 LVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPN 309

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T    L + A + +L+ G A+   AM+ G    ++V  AL++MY+K G +  A  VF 
Sbjct: 310 EFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFL 369

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  R+VVSWNS+I  Y   G   EAM +F  ML   + P+ VT +  L ACA LG ++ 
Sbjct: 370 SMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDE 429

Query: 359 GI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD-IFSKLQGKTLVSWNAMI 413
           G+ +++ ++ ++ +         ++ +  +  ++D A   I S   G  +V+W +++
Sbjct: 430 GLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLL 486


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/563 (42%), Positives = 337/563 (59%), Gaps = 4/563 (0%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMI 312
           ++R G+ +H   + +G      ++T LVD+YA CG V  AR +FD M ++ NV  WN +I
Sbjct: 78  AVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLI 137

Query: 313 AAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
            AY   G  E A+ ++++ML  G +EP N T    L ACA L DL  G  VH  + +   
Sbjct: 138 RAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSW 197

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             DV +   LI MY+KC  VD A  +F     +  V WN+MI    QNGR  EAL     
Sbjct: 198 AADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRN 257

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M ++ I P   T+VS I A A+   +   + +H    R  F     + T+L+DMYAK G 
Sbjct: 258 MAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGW 317

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAIS 550
           V  AR LFD +  R + +WN MI G+G HG    A ELF +M  E    P+ ITF+  +S
Sbjct: 318 VTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLS 377

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           AC+H G+V+E    F  +   Y I+P++ HY  +VD+LG +GR  EA D I+ M ++P  
Sbjct: 378 ACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDS 437

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            ++GA+L  CKIHKNVEL E A ++L EL+P++ G +VLL+NIYA +  W++ A+VR +M
Sbjct: 438 GIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLM 497

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
             +GL+K   CS +ELK + H F  G   HP+S  IY  LE L   I   GYVPDT S+ 
Sbjct: 498 TNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVF 557

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           H+VED  + N++  HSE+LAIAFGL+++ PG+ + + KNLRVC DCH   K IS +  RE
Sbjct: 558 HNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQRE 617

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           II+RD++R+H F NG CSC D+W
Sbjct: 618 IIIRDVNRYHHFVNGECSCKDHW 640



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 219/428 (51%), Gaps = 8/428 (1%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           NY  +L+ C     +R G+++H +L+V+G  LD    T +V++YA CG +  A ++FD M
Sbjct: 65  NYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEM 124

Query: 200 PER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLRI 257
           P + ++  WN ++  +A++G  E A++L   M   G    D  T   +L A A +  L  
Sbjct: 125 PNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGA 184

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH   MR  + + V V   L+DMYAKCG V+ A  VFD    R+ V WNSMIAA  +
Sbjct: 185 GREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQ 244

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G P EA+ + + M  +G+ PT VT++ A+ A AD G L RG  +H    +   G+   +
Sbjct: 245 NGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKL 304

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-N 436
             SL+ MY+K   V  A  +F +L  + L+SWNAMI G+  +G  + A   F +MR++  
Sbjct: 305 KTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQ 364

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTA 495
           + PD  T V V+ A     +++ AK +  L++     +  V   T L+D+    G    A
Sbjct: 365 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEA 424

Query: 496 RALFD-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISACS 553
             +   M+ +     W  +++G   H   + A    +K++E  P    +   L  I A  
Sbjct: 425 SDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYA-- 482

Query: 554 HSGLVEEG 561
            SG  EE 
Sbjct: 483 QSGKWEEA 490



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 207/390 (53%), Gaps = 12/390 (3%)

Query: 39  YRHPS-ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           Y H + A +L  C    +++  R++   ++ SGL    +  T+LV L+     +S A R+
Sbjct: 61  YNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRL 120

Query: 95  FEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVG 152
           F+ +P++ +  L++ +++ YA+    + A+     M     + P  + Y  +LK C  + 
Sbjct: 121 FDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALL 180

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           ++  G+E+H +++   ++ D+F   G+++MYAKCG ++EA+ +FD    RD V WN+++A
Sbjct: 181 DLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIA 240

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
              QNG    AL L   M  EG     +T+VS + A A+ G+L  G+ +HGY  R GF S
Sbjct: 241 ACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGS 300

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              + T+L+DMYAK G V  AR++FD +  R ++SWN+MI  +   G+ + A  +F++M 
Sbjct: 301 QDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMR 360

Query: 333 DQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGTDVSMTNSLISMYSKCKK 390
           ++  V P ++T +  L AC   G ++    V  L+  +  +   V     L+ +     +
Sbjct: 361 NEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGR 420

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
              A+D+   +    LV  ++ I G   NG
Sbjct: 421 FKEASDVIKGM----LVKPDSGIWGALLNG 446


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/756 (33%), Positives = 411/756 (54%), Gaps = 14/756 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+K+G           V  F K   LS A ++FE +P K     + M+ GY K  +L +A
Sbjct: 38  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV-- 180
                 M    V      +T L+     + + +   E+  Q+   G   D      ++  
Sbjct: 98  RKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 181 -NMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
            N +    QI +      ++  +  L+  NT+V  + ++      LDL  ++ +E    D
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN----RLDLACQLFKEMPEID 209

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T  ++L A   +  + +G+ +H + ++  F   V VS AL+D Y+K   V  AR +FD
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M  ++ VS+N +I+ Y   G  + A  +F+++     +         L   ++  D E 
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H         +++ + NSL+ MY+KC K + A  IF+ L  ++ V W AMI  Y Q
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
            G   E L  F KMR  ++  D  T  S++ A A ++ +   K +H+ +I+S F  NVF 
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            +AL+D+YAKCG++  A   F  M +R++ +WN MI  Y  +G  +A ++ F +M+    
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P+ ++FL  +SACSHSGLVEEG+ +F S+ + Y ++P  +HY ++VD+L R+GR NEA 
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 569

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAA 657
             + +MPI+P   ++ ++L AC+IHKN EL  +AA++LF ++   +   +V ++NIYAAA
Sbjct: 570 KLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAA 629

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             W+ ++KV   M  +G++K P  S VE+K+E H F +    HPQ + I   ++ L   +
Sbjct: 630 GQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM 689

Query: 718 KAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           +  GY PDT+ ++H+ ++  +   L  HSE+LAIAF L+++  GS I + KNLR C DCH
Sbjct: 690 EELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCH 749

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            A K IS + GREI VRD  RFH F++G CSCGD+W
Sbjct: 750 AAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 209/468 (44%), Gaps = 54/468 (11%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L +   +    ++ GFD   + S   V  + K G +  AR +F+ M  +N VS N MI+ 
Sbjct: 28  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 87

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGT 373
           YV+ GN  EA ++F  M    VE T VT    +   + L   +      +L  Q+ + GT
Sbjct: 88  YVKSGNLGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAF---ELFVQMQRCGT 140

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKT--------LVSWNAMILGYAQNGRVNEA 425
           +     + +++ S C   +    I +++Q +         L+  N ++  Y ++ R++ A
Sbjct: 141 EPDYV-TFVTLLSGCNGHEMGNQI-TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 198

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
              F +M     + DSFT  +V+ A   L  I   + IH+ VI++ F  NVFV  AL+D 
Sbjct: 199 CQLFKEMP----EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 254

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y+K  +V  AR LFD M E+   ++NV+I GY   G  K A +LF ++           F
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314

Query: 546 LCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA------ 597
              +S  S++   E G  IH  T +      +  +    ++VD+  + G+  EA      
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTT---ADSEILVGNSLVDMYAKCGKFEEAEMIFTN 371

Query: 598 --------WD-----FIQKMPIEPGITVFGAMLGACKIHKNVELGE--KAANRLFELDPD 642
                   W      ++QK   E G+ +F  M  A  I          +A+  +  L   
Sbjct: 372 LTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG 431

Query: 643 EGGYHVL-----LANIYAAASMWDKLAKVRTIMEK-KGLQKTPGCSLV 684
           +  +  +     ++N+++ +++ D  AK  +I +  +  Q+ P  ++V
Sbjct: 432 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIV 479



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 10/214 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL    S+  L   +++   IIKSG        + L+ ++ K  S+ DA + F+ +PD
Sbjct: 416 ASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD 475

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++ M+  YA+    +  +     M    + P   ++  +L  C   G +  G   
Sbjct: 476 RNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL-W 534

Query: 161 HGQLIVNGFSLDLFA--MTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG---F 214
           H   +   + LD        VV+M  + G+  EA K+   MP + D + W++++      
Sbjct: 535 HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIH 594

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
                A  A D +  M E      ++ + +I  A
Sbjct: 595 KNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 628


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/701 (34%), Positives = 393/701 (56%), Gaps = 48/701 (6%)

Query: 160  IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
            +H   + NG    L +   ++ +Y K   ++ A K+FD +P+R+  +W  +++GF++ G 
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 220  AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            +E+   L   M  +G   +  T+ S+    +   +L++GK VH + +R G D+ V +  +
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 280  LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
            ++D+Y KC   E A  VF+ M   +VVSWN MI+AY+  G+ E+++ +F+++  + V   
Sbjct: 431  ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 340  NVTI------------MEALHACADLGD-------------------LERGIFVHKLLDQ 368
            N  +            +E L+   + G                    +E G  +H ++ +
Sbjct: 491  NTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLK 550

Query: 369  LKLGTDVSMTNSLISMYSKCKKVDRA----------------ADIFSKLQGKTLVSWNAM 412
                 D  + +SL+ MY KC ++D A                A +  K     +VSW  M
Sbjct: 551  FGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLM 610

Query: 413  ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
            + GY  NG+  + L  F  M  + +  D  T+ ++I A A   ++ + + +HA   +   
Sbjct: 611  VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGH 670

Query: 473  EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
              + +V ++LIDMY+K G++  A  +F   NE ++  W  MI G   HG GK A+ LF +
Sbjct: 671  RIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEE 730

Query: 533  MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
            ML     PN++TFL  ++AC H+GL+EEG  YF  +K  Y I P ++H  +MVDL GRAG
Sbjct: 731  MLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAG 790

Query: 593  RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
             L E  +FI +  I    +V+ + L +C++HKNVE+G+  +  L ++ P + G +VLL+N
Sbjct: 791  HLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSN 850

Query: 653  IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
            + A+   WD+ A+VR++M ++G++K PG S ++LK+++H+F  G   HPQ + IY++L+ 
Sbjct: 851  MCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDI 910

Query: 713  LIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
            LI  +K  GY  D   +  DVE+   E L+S HSEKLA+ FG++N++  + I I KNLR+
Sbjct: 911  LIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRI 970

Query: 772  CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            C DCHN  KY S +  REII+RD+HRFH FK+G CSCGDYW
Sbjct: 971  CTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 238/529 (44%), Gaps = 54/529 (10%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++L+ K +++  A ++F+ IP +    +  ++ G+++  S +        MR     P 
Sbjct: 330 LLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPN 389

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            Y  + L K C     ++ GK +H  ++ NG   D+     ++++Y KC   E A ++F+
Sbjct: 390 QYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFE 449

Query: 198 RMPERDLVS-------------------------------WNTIVAGFAQNGFAELALDL 226
            M E D+VS                               WNTIV G  Q G+   AL+ 
Sbjct: 450 LMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQ 509

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
           +  M E G     +T    L   +++  + +G+ +HG  ++ GF     + ++LV+MY K
Sbjct: 510 LYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCK 569

Query: 287 CGRVETARLV-----FDGMKSRN-----------VVSWNSMIAAYVEGGNPEEAMRIFQK 330
           CGR++ A +V      D +K+ N           +VSW  M++ YV  G  E+ ++ F+ 
Sbjct: 570 CGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRL 629

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           M+ + V     T+   + ACA+ G LE G  VH    ++    D  + +SLI MYSK   
Sbjct: 630 MVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGS 689

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           +D A  IF +     +V W +MI G A +G+  +A+  F +M ++ I P+  T + V+ A
Sbjct: 690 LDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNA 749

Query: 451 LAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT 509
                ++    ++   +    C    V   T+++D+Y + G +   +         H+T+
Sbjct: 750 CCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTS 809

Query: 510 -WNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
            W   +     H    +GK   E+  ++   P+ P     L  + A +H
Sbjct: 810 VWKSFLSSCRLHKNVEMGKWVSEMLLQV--APSDPGAYVLLSNMCASNH 856



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 167/373 (44%), Gaps = 48/373 (12%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           ++++G+    +    ++ L+ K      A RVFE + +     ++ M+  Y +   ++ +
Sbjct: 416 MLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKS 475

Query: 123 VSFLIRMRYDDVAP--------VVYNYT-------YLLKVCGD----------------V 151
           +    R+ Y DV          + + Y        Y +  CG                 +
Sbjct: 476 LDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSL 535

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP----------- 200
             +  G+++HG ++  GF  D F  + +V MY KCG+++ A  +   +P           
Sbjct: 536 SLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGV 595

Query: 201 -----ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
                +  +VSW  +V+G+  NG  E  L     M  E    D  T+ +I+ A AN G L
Sbjct: 596 TCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGIL 655

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G+ VH Y  + G      V ++L+DMY+K G ++ A  +F      N+V W SMI+  
Sbjct: 656 EFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGC 715

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTD 374
              G  ++A+ +F++ML+QG+ P  VT +  L+AC   G LE G    +++ D   +   
Sbjct: 716 ALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPG 775

Query: 375 VSMTNSLISMYSK 387
           V    S++ +Y +
Sbjct: 776 VEHCTSMVDLYGR 788



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 138/308 (44%), Gaps = 32/308 (10%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL----------- 105
           R++  +++K G C     ++ LV ++CK   + +A+ V + +P  LD L           
Sbjct: 542 RQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVP--LDFLKNGNAGVTCKE 599

Query: 106 -------YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
                  +  M+ GY      +D +     M  + V   +   T ++  C + G +  G+
Sbjct: 600 LKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGR 659

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            +H      G  +D +  + +++MY+K G +++A+ +F +  E ++V W ++++G A +G
Sbjct: 660 HVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHG 719

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-----KAVHGYAMRAGFDSI 273
             + A+ L   M  +G   + +T + +L A  + G L  G          Y +  G    
Sbjct: 720 QGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPG---- 775

Query: 274 VNVSTALVDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           V   T++VD+Y + G + ET   +F+   S     W S +++     N E    + + +L
Sbjct: 776 VEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLL 835

Query: 333 DQGVEPTN 340
              V P++
Sbjct: 836 Q--VAPSD 841


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/731 (35%), Positives = 410/731 (56%), Gaps = 20/731 (2%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP--D 100
           LL+ C   ++ R    +   +I+  +    +    L+SL+ K    + A  VFE +    
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K D + +  M+  Y       DA+   +      + P  Y YT +++ C +   +  G+ 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 160 IHGQLIVNG-FSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
             G L+  G F  D+     +++M+ K     E AYK+FD+M E ++V+W  ++    Q 
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           GF   A+     M   G   D  T+ S+  A A + +L +GK +H +A+R+G   + +V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVE 305

Query: 278 TALVDMYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLD 333
            +LVDMYAKC   G V+  R VFD M+  +V+SW ++I  Y++  N   EA+ +F +M+ 
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 334 QG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           QG VEP + T   A  AC +L D   G  V     +  L ++ S+ NS+ISM+ K  +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A   F  L  K LVS+N  + G  +N    +A     ++  + +   +FT  S++  +A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            +  IR  + IH+ V++     N  V  ALI MY+KCG++ TA  +F+ M  R+V +W  
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI G+  HG     +E FN+M+E   KPN++T++  +SACSH GLV EG  +F S+ +D+
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            I+P M+HY  MVDLL RAG L +A++FI  MP +  + V+   LGAC++H N ELG+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A ++ ELDP+E   ++ L+NIYA A  W++  ++R  M+++ L K  GCS +E+ +++H 
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV----EDYVQENLLSSHSEK 747
           FY G T HP + +IY  L+ LI EIK  GYVPDT+ + H +    ++  +E LL  HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785

Query: 748 LAIAFGLLNSS 758
           +A+AFGL+++S
Sbjct: 786 IAVAFGLISTS 796



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 240/490 (48%), Gaps = 14/490 (2%)

Query: 119 LDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           L  AVS L  M  D + P+    ++ LLK C    + R GK +H +LI      D     
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101

Query: 178 GVVNMYAKCG---QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            ++++Y+K G   + E+ ++   R  +RD+VSW+ ++A +  NG    A+ +     E G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKC-GRVET 292
              +     +++ A +N   + +G+   G+ M+ G F+S V V  +L+DM+ K     E 
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  VFD M   NVV+W  MI   ++ G P EA+R F  M+  G E    T+     ACA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK---KVDRAADIFSKLQGKTLVSW 409
           L +L  G  +H    +  L  DV    SL+ MY+KC     VD    +F +++  +++SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339

Query: 410 NAMILGYAQNGRV-NEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            A+I GY +N  +  EA+N F +M ++ +++P+ FT  S   A   LS  R  K +    
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
            +     N  V  ++I M+ K   +  A+  F+ ++E+++ ++N  +DG   +   + A 
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           +L +++ E     +  TF   +S  ++ G + +G    + + K  G+        A++ +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISM 518

Query: 588 LGRAGRLNEA 597
             + G ++ A
Sbjct: 519 YSKCGSIDTA 528



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGIFVHKLLD 367
           + +I  ++  G+   A+     M   G+ P + VT    L +C    D   G  VH  L 
Sbjct: 30  DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ---GKTLVSWNAMILGYAQNGRVNE 424
           +  +  D  + NSLIS+YSK     +A D+F  ++    + +VSW+AM+  Y  NGR  +
Sbjct: 90  EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
           A+  F +     + P+ +   +VI A +    +   +     ++++  FE +V V  +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 484 DMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           DM+ K   +   A  +FD M+E +V TW +MI      G  + A+  F  M+    + + 
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269

Query: 543 ITFLCAISACSH 554
            T     SAC+ 
Sbjct: 270 FTLSSVFSACAE 281


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/612 (38%), Positives = 374/612 (61%), Gaps = 11/612 (1%)

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++    + G    AL ++++     +    + I+S         SL  G  +H + + 
Sbjct: 51  NPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILS----CTRQNSLPQGIDLHRHLIH 106

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G D    ++T L++MY++   ++ AR VFD  + R +  WN++  A    G   E + +
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 328 FQKMLDQGVEPTNVTIMEALHAC----ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           +++M   GV     T    L AC    A +  L  G  +H  + +      V +  +L+ 
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDS 441
           MY++   V  A+ +F ++  K +VSW+AMI  Y++NG+  EAL  F KM   ++++ P+S
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            TMVSV+ A A L+ +   K +H  ++R   +  + V++AL+ +YA+CG +     +F+ 
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M +R V +WN +I  YG HG G+ A+++F +M++    P+ I+F+  + ACSH+GLVEEG
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
              F S+ + + I P ++HY  MVDLLGRA RL+EA   I  M IEPG  V+G++LG+C+
Sbjct: 407 KVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCR 466

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
           IH NVEL E+A +RLFEL+P   G +VLLA+IYA A MW+++ +V+ ++E +GLQK PG 
Sbjct: 467 IHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGR 526

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENL 740
           S +E++ +++SF S    +PQ ++++  L  L  E+K  GYVPDT  + +D++   +E +
Sbjct: 527 SCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERI 586

Query: 741 LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHC 800
           +  HSEKLA+AFGL+NS  G TI I KNLR+C DCH+ TK+IS    REI+VRD++RFH 
Sbjct: 587 VLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHL 646

Query: 801 FKNGVCSCGDYW 812
           F++GVCSCGDYW
Sbjct: 647 FQDGVCSCGDYW 658



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 209/373 (56%), Gaps = 10/373 (2%)

Query: 40  RHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
           +H   LL+  CT    L + + L   +I  G        TKL++++ + +S+ +A +VF+
Sbjct: 78  QHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFD 137

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC----GDVG 152
               +   +++ + +         + +    RM    V    + YTY+LK C      V 
Sbjct: 138 KTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVS 197

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  G+EIHG ++ +GF   +  MT +++MYA+ G +  A ++FD+MP +++VSW+ ++A
Sbjct: 198 LLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIA 257

Query: 213 GFAQNGFAELALDLVTRMHEEGRR--GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
            +++NG    AL+L  +M  E +    + +T+VS+L A A + +L  GK +HGY +R G 
Sbjct: 258 CYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGL 317

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DSI+ V +ALV +YA+CG +E    VF+ M+ R+VVSWNS+I++Y   G   +A++IF++
Sbjct: 318 DSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKE 377

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           M+DQG+ P+ ++ +  L AC+  G +E G +    ++   K+   V     ++ +  +  
Sbjct: 378 MIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRAN 437

Query: 390 KVDRAADIFSKLQ 402
           ++D AA I   ++
Sbjct: 438 RLDEAAKIIDDMR 450



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 230/454 (50%), Gaps = 13/454 (2%)

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           + +++   K  +L+ A+  L +    +  P  + Y  L+  C     + +G ++H  LI 
Sbjct: 51  NPLIQSLCKQGNLNQALQVLSQ----EPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           +G   D F  T ++NMY++   I+ A K+FD+  +R +  WN +       G+    LDL
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 227 VTRMHEEGRRGDFITIVSILPAV----ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
             RM+  G   D  T   +L A     A V  L  G+ +HG+ +R GF+  V++ T L+D
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTN 340
           MYA+ G V  A  VFD M  +NVVSW++MIA Y + G P EA+ +F+KM+  +Q + P +
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VT++  L ACA L  LE+G  +H  + +  L + + + ++L+++Y++C  ++    +F +
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           ++ + +VSWN++I  Y  +G   +A+  F +M  + + P   + VSV+ A +   ++   
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406

Query: 461 KWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYG 518
           K +   ++R      +V     ++D+  +   +  A  + D M  E     W  ++    
Sbjct: 407 KVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCR 466

Query: 519 THGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
            H   + A    +++ E  PT   +   L  I A
Sbjct: 467 IHCNVELAERATSRLFELEPTNAGNYVLLADIYA 500


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/704 (32%), Positives = 391/704 (55%), Gaps = 3/704 (0%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A++L+ CT +++     ++  L I+ G     +  T LV ++     L  A  +F  +P+
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPE 233

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  ++ GY +     + +     M  + +      +    + C  +     G ++
Sbjct: 234 RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQL 293

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +   F  D    T  ++MYAKC ++ +A K+F+  P     S N ++ G+A+    
Sbjct: 294 HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQV 353

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL++   + +     D I++   L A + +     G  +HG A++ G D  + V+  +
Sbjct: 354 LEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTI 413

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKCG +  A L+FD M+ ++ VSWN++IAA+ +  + EE + +F  ML   +EP +
Sbjct: 414 LDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDD 473

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T    + ACA    L  G+ VH  + +  +G D  + +++I MY KC  +  A  I  +
Sbjct: 474 YTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHER 533

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L+ +T VSWN++I G++   +   AL+YF +M    + PD+FT  +V+   A L+ +   
Sbjct: 534 LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +++     +V++ + ++DMY+KCG +  +R +F+   +R   TW+ MI  Y  H
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH 653

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           GLG+ A++LF +M     KPN   F+  + AC+H G V++G+HYF  ++  YG++P M+H
Sbjct: 654 GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEH 713

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVDLLGR+G++NEA + I+ MP E    ++  +LG C++  NVE+ EKAAN L +LD
Sbjct: 714 YSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLD 773

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P +   +VLL+N+YA A MW ++AK+R+ M+   L+K PGCS +++++EVH+F  G   H
Sbjct: 774 PQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAH 833

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
           P+S+ IY     L+DE+K  GYVP+ +     E+  +++    H
Sbjct: 834 PRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSYEGH 877



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 183/666 (27%), Positives = 320/666 (48%), Gaps = 58/666 (8%)

Query: 13  TNSTPTQTLHEHKHTLSQRAYIPSR--IYRHPSALLLEVCTSLKEL---RRILPLIIKSG 67
           + +TP   +H    ++S     P++   + H    + + C++LK +   ++    I  +G
Sbjct: 17  SQTTPPYAIH----SISSNQMNPTKKLTFSH----IFQKCSNLKAINPGKQAHAQITVTG 68

Query: 68  LCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLD------- 120
                     L+  +CK  +L+ A  VF+ +P +    ++TM+ GYA   +++       
Sbjct: 69  FVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFD 128

Query: 121 -----DAVSF-------------------LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
                D VS+                     +MR  ++      +  +LK C  + +   
Sbjct: 129 SMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGL 188

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G ++H   I  GF  D+   T +V+MY+ C +++ A+ +F  MPER+ V W+ ++AG+ +
Sbjct: 189 GLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVR 248

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIV 274
           N      L L   M +EG      T  S   + A + +  +G  +H YA++   G+D+IV
Sbjct: 249 NDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV 308

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
              TA +DMYAKC R+  AR VF+   +    S N++I  Y       EA+ IF+ +   
Sbjct: 309 --GTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKS 366

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
            ++   +++  AL AC+ +     GI +H L  +  L  ++ + N+++ MY+KC  +  A
Sbjct: 367 YLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             IF  ++ K  VSWNA+I  + QN  V E L  F  M    ++PD +T  SV+ A A  
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             + Y   +H  VI+S    + FV +A+IDMY KCG +  A  + + + ER   +WN +I
Sbjct: 487 KALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSII 546

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            G+ +   G+ A+  F++ML+    P++ T+   +  C++   VE G      + K   +
Sbjct: 547 SGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK---L 603

Query: 575 EPVMDHYGA--MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           +   D Y A  +VD+  + G + ++    +K P    +T + AM+ A   H    LGE A
Sbjct: 604 QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVT-WSAMICAYAYHG---LGEDA 659

Query: 633 ANRLFE 638
             +LFE
Sbjct: 660 I-KLFE 664


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/733 (34%), Positives = 390/733 (53%), Gaps = 74/733 (10%)

Query: 154 IRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQ-----IEEAYKMFDRMPERDLVSW 207
           +R+  E+H +L  +G   L   +   ++N    C +     +  A  +FDRMP    +  
Sbjct: 12  VRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPSTFLFD 71

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT---IVSILPAVANVGSLRIGKAVHGY 264
             + A             L  RM   G R D  T   +     + +   SL +   +H  
Sbjct: 72  TALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAA 131

Query: 265 AMRAGFDSIVN-VSTALVDMYAKCGRVETARLVFD--------------------GM--- 300
            +R    S    VS +L+ MY + G    AR  FD                    GM   
Sbjct: 132 CLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCD 191

Query: 301 --------KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
                     R+V+SW S+IAAY       EA+  F+ ML  G+ P  VT++  L ACA 
Sbjct: 192 TQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAK 251

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK---------------------- 390
           L DLE G  +H L+++  + T  ++  +LI MY+KC                        
Sbjct: 252 LKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNA 311

Query: 391 ----------VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
                     VD A  +F +++ + ++++N+M+ GY  +G++ EAL  F  MR  +++ D
Sbjct: 312 IIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVD 371

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           +FT+V+++ A A L  ++  + +HA + +   E ++++ TAL+DMY KCG V  A  +F 
Sbjct: 372 NFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQ 431

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M +R V TW  MI G   +G+GKAA+E F +M     +PN ++++  ++ACSHS L+ E
Sbjct: 432 RMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNE 491

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF  ++  Y I P ++HYG M+DLLGR+G L+EA D ++ MPI+P   ++ ++L AC
Sbjct: 492 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSAC 551

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HK+++L + AA  L +L+PDE G +V L NIY  +  W+  +K+R +ME++ ++KT G
Sbjct: 552 RVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAG 611

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQEN 739
            S + +  +VH F      HP+   I   LE +   +K+ GY P T+ I  DV++  +E 
Sbjct: 612 YSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQ 671

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L +HSEKLAIAFGL+N +P   +HIRKNLRVC DCH+A K IS +  REIIVRD  RFH
Sbjct: 672 ALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFH 731

Query: 800 CFKNGVCSCGDYW 812
            F+ G CSC D+W
Sbjct: 732 HFREGTCSCNDFW 744



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 160/359 (44%), Gaps = 33/359 (9%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+S   K   L D   +    P +    + +++  Y++     +AV     M    +A
Sbjct: 177 TMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIA 236

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG-------- 187
           P       +L  C  + ++  G+ +H  +   G       +  +++MYAKCG        
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQV 296

Query: 188 ------------------------QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
                                    ++ A  +FD M  RD++++N+++ G+  +G    A
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREA 356

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L L   M     R D  T+V++L A A++G+L+ G+A+H    +   ++ + + TAL+DM
Sbjct: 357 LLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDM 416

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCGRV+ A +VF  M  R+V +W +MIA     G  + A+  F +M   G +P +V+ 
Sbjct: 417 YMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSY 476

Query: 344 MEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +  L AC+    L  G ++  ++     +   +     +I +  +   +D A D+   +
Sbjct: 477 IAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM 535


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/691 (36%), Positives = 392/691 (56%), Gaps = 21/691 (3%)

Query: 136 PVVYN---YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD--LFAMTGVVNMYAKCGQIE 190
           P+V++   Y  L + C     +  G+ +H  + ++  + D  LF    VVNMYAKCG ++
Sbjct: 58  PLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLD 117

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
            A++MFD MPE+++VSW  +V+G+AQ+G +     +   M    +  +F    S++ A  
Sbjct: 118 YAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQPTEF-AFASVISACG 176

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK-CGRVETARLVFDGMKSRNVVSWN 309
             G    G+ VH  A++  FDS V V  AL+ MY K CG  + A  V++ M  RN+VSWN
Sbjct: 177 --GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWN 234

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD-LERGIFVHKLLDQ 368
           SMIA +   G    A+ +F +M   G+     T++        +GD LE    +  L  +
Sbjct: 235 SMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIK 294

Query: 369 LKLGTDVSMTNSLISMYSKCK-KVDRAADIFSKLQGKT-LVSWNAMILGYAQNGRVNEAL 426
                 + +  +L+  YS    +V     IF +L G+  +VSW  +I  +A+     +AL
Sbjct: 295 TGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDP-KKAL 353

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMY 486
             F +   + + PD      V+ A A L+  R+A  + + V++  FE ++ +  ALI   
Sbjct: 354 VIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHAC 413

Query: 487 AKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           A+CG+V  ++ +FD M  R   +WN M+  Y  HG GK A+ LF++M     +P+  TF+
Sbjct: 414 ARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFV 470

Query: 547 CAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI 606
             +SACSH+G+ EEG   F ++  ++GI P +DHY  MVD+LGRAG+++EA + I KMP+
Sbjct: 471 ALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPM 530

Query: 607 EPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKV 666
           EP   V+ A+LG+C+ H   +L + AA +L ELDP+    +VL++NI+     +++   +
Sbjct: 531 EPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLI 590

Query: 667 RTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT 726
           R  ME K ++K PG S +E+ N+VH F SG  +HP+ + I   LE L+  +K  GYVP  
Sbjct: 591 RREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQI 650

Query: 727 N-SIHDVEDYVQENLLSSHSEKLAIAFGLLN----SSPGSTIHIRKNLRVCGDCHNATKY 781
           + ++HD+ED  +E  L  HSEKLA+AF L+N       G+TI I KN+R+C DCHN  K 
Sbjct: 651 SLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKL 710

Query: 782 ISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            S +   EI+VRD +RFH FK  VCSC DYW
Sbjct: 711 ASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 251/535 (46%), Gaps = 35/535 (6%)

Query: 4   HSQCQLSVFTNSTPTQTL-HEHKHTLSQRAYIPSRIYRHPSALLLEVC---TSLKELRRI 59
           H Q  L +F + TP   L H H                H  A L + C   +SL E + +
Sbjct: 42  HLQEALKLFYSITPPPPLVHSH----------------HTYAALFQACARRSSLPEGQAL 85

Query: 60  -LPLIIKSGLCDQHLFQTK-LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
              + + +   D +LF T  +V+++ K  SL  A ++F+ +P+K    +  ++ GYA+  
Sbjct: 86  HRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHG 145

Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
             ++       M      P  + +  ++  CG  G+   G+++H   +   F   ++   
Sbjct: 146 RSNECFRVFRGMLIWH-QPTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVGN 202

Query: 178 GVVNMYAK-CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
            ++ MY K CG  +EA+ +++ M  R+LVSWN+++AGF   G    AL+L ++MH  G R
Sbjct: 203 ALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIR 262

Query: 237 GDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC-GRVETAR 294
            D  T+VSI   +  +G  L     +    ++ GF   + V+TALV  Y+   G V    
Sbjct: 263 FDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCY 322

Query: 295 LVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
            +F  +  R +VVSW  +IAA+ E  +P++A+ IF++ L + + P        L ACA L
Sbjct: 323 RIFLELDGRQDVVSWTGIIAAFAE-RDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGL 381

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
                 + V   + ++    D+ + N+LI   ++C  V  +  +F K+  +  VSWN+M+
Sbjct: 382 ATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSML 441

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY-AKWIHALVIRSCF 472
             YA +G+  EAL  F +M   + +PD  T V+++ A +   +    AK    +      
Sbjct: 442 KAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGI 498

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAA 526
              +     ++D+  + G +  A+ L D M  E     W+ ++     HG  K A
Sbjct: 499 VPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLA 553



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 18/299 (6%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN-SLSDAARVFEPIPDKLDAL 105
           LE C  L+       L IK+G   +    T LV  +      +SD  R+F  +  + D +
Sbjct: 282 LECCFQLQ------CLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVV 335

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRY--DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             T +   A FA  D   + +I  ++  + +AP  + ++ +LK C  +   R    +   
Sbjct: 336 SWTGI--IAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSH 393

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++  GF  D+     +++  A+CG +  + ++FD+M  RD VSWN+++  +A +G  + A
Sbjct: 394 VLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEA 453

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVD 282
           L L ++M  +    D  T V++L A ++ G    G K     +   G    ++    +VD
Sbjct: 454 LLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVD 510

Query: 283 MYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +  + G++  A+ + D M    + V W++++ +  + G  + A     K+ +  ++P N
Sbjct: 511 ILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKE--LDPNN 567


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/640 (36%), Positives = 356/640 (55%), Gaps = 72/640 (11%)

Query: 245 ILP-AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +LP A+ +  +  + +A+H  A+ +G      V+++L+  Y + G    AR VFD M  +
Sbjct: 22  LLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEK 81

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT--------------------- 342
           NVV W+++IA Y   G+ E A  + ++M   GVEP  +T                     
Sbjct: 82  NVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTAL 141

Query: 343 --------------IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
                         +  AL A  D+ ++  G  VH  + +     D  +  +LI MY KC
Sbjct: 142 VRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKC 201

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL----NYFCK------------- 431
            + D    +F +     + S NA++ G ++N +V+EAL     + C+             
Sbjct: 202 GRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIV 261

Query: 432 ------------------MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
                             M+S  ++P+S T+  V+PA A ++ + + +  H   +R  F 
Sbjct: 262 ACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFL 321

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            +V+V +AL+DMYAKCG    AR +FD M  R+V +WN MI GY  HG    AV+LF  M
Sbjct: 322 HDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSM 381

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
            +   KP+ +TF C + ACS +GL EEG  YF  +++ +GI P M+HY  MV LLGR+G+
Sbjct: 382 QKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGK 441

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
           L+EA+D I +MP EP   ++G++LG+C+++ NV L E AA +LF+L+P   G +VLL+NI
Sbjct: 442 LDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNI 501

Query: 654 YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
           YA+  MWD + +VR  M+  GL+K  GCS +E+KN+VH   +G   HP    I   L  L
Sbjct: 502 YASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQL 561

Query: 714 IDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
             E+   G+ P  + + HDVE+  ++N+L+ HSEKLA+A GL+++ PG+ + + KNLR+C
Sbjct: 562 TIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRIC 621

Query: 773 GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GDCH A K+IS    REI VRD +RFH FK+G CSCGDYW
Sbjct: 622 GDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 169/366 (46%), Gaps = 70/366 (19%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           + +H   +V+G + D F  + +++ Y + G    A  +FDRMPE+++V W+ ++AG++  
Sbjct: 37  RALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSAR 96

Query: 218 GFAELA--------------------------------LDLVT---RMHEEGRRGDFITI 242
           G AE A                                LD VT   RMH EG   D   +
Sbjct: 97  GDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGV 156

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR------------- 289
              L AV +V  + +GK VHGY ++AG      V TAL+DMY KCGR             
Sbjct: 157 SCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSH 216

Query: 290 ------------------VETARLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRI 327
                             V  A L+F     R    NVVSW S++A  V+ G   EA+ +
Sbjct: 217 MDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDL 276

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F+ M   GVEP +VTI   L A A++  L  G   H    +     DV + ++L+ MY+K
Sbjct: 277 FRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAK 336

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C K   A  IF  +  + +VSWNAMI GYA +G    A+  FC M+    KPD  T   V
Sbjct: 337 CGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCV 396

Query: 448 IPALAE 453
           + A ++
Sbjct: 397 LGACSQ 402



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 197/442 (44%), Gaps = 79/442 (17%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
            P   +  PSAL  + C +    R +    + SGL +     + L+  + +  +   A  
Sbjct: 16  FPPDPHLLPSAL--KSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARS 73

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLD--------------------------------- 120
           VF+ +P+K    +  ++ GY+     +                                 
Sbjct: 74  VFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGR 133

Query: 121 --DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
             DAV+ L+RM  +   P     +  L   GDV E+  GK++HG ++  G  LD   +T 
Sbjct: 134 ALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTA 193

Query: 179 VVNMYAKCGQIEEAYKMFD-----------------------------------RMPERD 203
           +++MY KCG+ +E  ++F                                    R  E +
Sbjct: 194 LIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELN 253

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW +IVA   QNG    A+DL   M   G   + +TI  +LPA ANV +L  G++ H 
Sbjct: 254 VVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHC 313

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           +++R GF   V V +ALVDMYAKCG+   AR +FD M SRNVVSWN+MI  Y   G+   
Sbjct: 314 FSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAAN 373

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT----N 379
           A+++F  M     +P  VT    L AC+  G  E G    +  ++++ G  +S       
Sbjct: 374 AVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG---RRYFNEMQQGHGISPRMEHYA 430

Query: 380 SLISMYSKCKKVDRAADIFSKL 401
            ++++  +  K+D A D+ +++
Sbjct: 431 CMVTLLGRSGKLDEAYDLINEM 452



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 4/222 (1%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +AV     M+   V P       +L    +V  +  G+  H   +  GF  D++  + +V
Sbjct: 272 EAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALV 331

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MYAKCG+   A  +FD MP R++VSWN ++ G+A +G A  A+ L   M +  ++ D +
Sbjct: 332 DMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLV 391

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           T   +L A +  G    G+       +  G    +     +V +  + G+++ A  + + 
Sbjct: 392 TFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINE 451

Query: 300 MK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           M    +   W S++ +    GN   A    +K+    +EP N
Sbjct: 452 MPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQ--LEPGN 491



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 6/175 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + LV ++ K      A  +F+ +P +    ++ M+ GYA      +AV     M+     
Sbjct: 328 SALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQK 387

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV-NGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           P +  +T +L  C   G    G+    ++   +G S  +     +V +  + G+++EAY 
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447

Query: 195 MFDRMP-ERDLVSWNTIVAGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSI 245
           + + MP E D   W +++      G    AE+A + + ++ E G  G+++ + +I
Sbjct: 448 LINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQL-EPGNAGNYVLLSNI 501


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/661 (33%), Positives = 393/661 (59%), Gaps = 1/661 (0%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKG 112
           KE ++I   I+++ L      +T L+  + K    ++A  +F+ + D+ + + ++ M+ G
Sbjct: 156 KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           + +    ++++ + +  + ++V  V  ++T  L  CG    +  GK++H   I  GF  D
Sbjct: 216 FGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD 275

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
            +  T ++ MY KC  IE A K+F+ +P++++  WN +++ +  NG+A  AL +  +M  
Sbjct: 276 PYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKL 335

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                D  TI+++L + +  G   +G+ +H   ++    S + + +AL+ MY+K G    
Sbjct: 336 CTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNY 395

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  +F  MK R+VV+W S+I+ + +    +EA+  F+ M    V+P +  +   + AC  
Sbjct: 396 ANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTG 455

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
           L  ++ G  +H  + +  L  DV + +SL+ MYSK    +RA +IFS +  K LV+WN++
Sbjct: 456 LEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSI 515

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           I  Y +N   + ++N F ++   ++ PDS +  SV+ A++ ++ +   K +H  ++R   
Sbjct: 516 ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             ++ V   LIDMY KCG +  A+ +F+ ++E+++  WN MI GYG+HG    A+ELF++
Sbjct: 576 PFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE 635

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M     KP+D+TFL  +S+C+HSGL+EEG+H F  +K  +GIEP M+HY  +VDL GRAG
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
            L +A+ F++ MP+EP  +++ ++L +CKIH N+ELGE  AN+L  ++P +G  +V L N
Sbjct: 696 CLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLN 755

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLET 712
           +Y  A +WD+ A +R  M++KGL+KTPGCS +E++N+V  FYSG    P +  IY  L +
Sbjct: 756 LYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSS 815

Query: 713 L 713
           L
Sbjct: 816 L 816



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 176/655 (26%), Positives = 325/655 (49%), Gaps = 52/655 (7%)

Query: 23  EHKHTLSQRAYI---------PSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCD 70
           E K  + QR YI         P    R     LL+ C SL  L   + I   II +GL  
Sbjct: 27  EIKSLVQQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHS 86

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLD--ALYHTMLKGYAKFASLDDAVSF 125
                + L++++ K  + +DA +VF+ +P     +D   ++++++ GY +F  L++ +  
Sbjct: 87  DQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQ 146

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
             RM+                        + GK+IH  ++ N  + D F  T +++ Y K
Sbjct: 147 FGRMQSSGY--------------------KEGKQIHSYIVRNMLNFDPFLETALIDTYFK 186

Query: 186 CGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           CG+  EA  +F ++ +R ++V+WN ++ GF +NG  E +L+       E  +    +   
Sbjct: 187 CGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTC 246

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
            L A      +  GK VH  A++ GF+    V T+L+ MY KC  +E+A  VF+ +  + 
Sbjct: 247 TLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKE 306

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +  WN++I+AYV  G   +A+RI+++M    V   + TI+  L + +  G  + G  +H 
Sbjct: 307 IELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHT 366

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            + +  L + +++ ++L++MYSK    + A  IFS ++ + +V+W ++I G+ QN +  E
Sbjct: 367 EIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKE 426

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL++F  M +  +KPDS  M S+I A   L  +     IH  VI+S  + +VFV ++L+D
Sbjct: 427 ALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLD 486

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MY+K G    A  +F  M  +++  WN +I  Y  + L   ++ LF+++L     P+ ++
Sbjct: 487 MYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVS 546

Query: 545 FLCAISACSHSGLVEEG--IH-YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           F   ++A S    + +G  +H Y   L   + ++        ++D+  + G L  A    
Sbjct: 547 FTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQV----ENTLIDMYIKCGLLKYAQHIF 602

Query: 602 QKMPIEPGITVFGAMLGACKIH----KNVELGEKAANRLFELDPDEGGYHVLLAN 652
           +++  E  +  + +M+G    H    K +EL ++   R   + PD+  +  LL++
Sbjct: 603 ERIS-EKNLVAWNSMIGGYGSHGECSKAIELFDEM--RSSGIKPDDVTFLSLLSS 654



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 260/534 (48%), Gaps = 40/534 (7%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           + Y  LLK C  +  ++ GK IH  +I  G   D +  + ++N+Y KCG   +A K+FD+
Sbjct: 54  FTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQ 113

Query: 199 MPER-----DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           +P+      D+  WN+I+ G+ + G  E  +    RM   G +                 
Sbjct: 114 LPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKE---------------- 157

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMI 312
               GK +H Y +R   +    + TAL+D Y KCGR   AR +F  +K R N+V+WN MI
Sbjct: 158 ----GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             + E G  E ++  +     + V+  + +    L AC     +  G  VH   D +K+G
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVH--CDAIKVG 271

Query: 373 --TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              D  +  SL++MY KC+ ++ A  +F+++  K +  WNA+I  Y  NG   +AL  + 
Sbjct: 272 FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYK 331

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
           +M+   +  DSFT+++V+ + +   +    + IH  +++   + ++ + +AL+ MY+K G
Sbjct: 332 QMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFG 391

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
               A ++F  M ER V  W  +I G+  +   K A++ F  M     KP+       IS
Sbjct: 392 DSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIIS 451

Query: 551 ACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           AC+    V+ G  IH F  +K   G++  +    +++D+  + G    A +    MP++ 
Sbjct: 452 ACTGLEKVDLGCTIHGFV-IKS--GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK- 507

Query: 609 GITVFGAMLGACKIHKNV-ELGEKAANRLF--ELDPDEGGYHVLLANIYAAASM 659
            +  + +++ +C    N+ +L     +++   +L PD   +  +LA I + A++
Sbjct: 508 NLVAWNSII-SCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAAL 560


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/754 (34%), Positives = 410/754 (54%), Gaps = 19/754 (2%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +  T +++ + K   L  A  VF+ I  +  A+++ M+         D+A+    +MR  
Sbjct: 175 IVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLG 234

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
            V P        L  C    +      IH          D    T +VNMY K G++++A
Sbjct: 235 GVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDA 294

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
            ++F+R+ ERD+VSWN ++   A NGF + A      M   G     IT V+IL A    
Sbjct: 295 EEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLA 354

Query: 253 GSLRIGKAVHGYAMRAG--FDSI-VNVSTALVDMYAKCGRVETA----RLVFDGMKSRNV 305
             L+ G  V   A+  G   +S+ V + TA+++MY++C   ++A     L+       ++
Sbjct: 355 AHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSI 414

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           + WN++++ YVE    EEA  IF+ ML  GV    V++M   +AC     LE+G ++H L
Sbjct: 415 MMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSL 474

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L + +L     + N+L++MY++   ++ A +IF  +  + ++SW AM+  ++Q G   EA
Sbjct: 475 LTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREA 534

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F  +  + + P+  T  +V+ A   L+ I  AK + A +  + F  NV V   L+  
Sbjct: 535 LRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCT 594

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDIT 544
             KCG++      F +M  ++  +WN  I     HG G   VELF  M LEG      +T
Sbjct: 595 LGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEG-IDTGSVT 653

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
            +  +S+CSH+GLV +G  YF ++  DYG     +HY  ++DLL RAG L  A +F++++
Sbjct: 654 LIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRL 713

Query: 605 P-----IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           P     + P IT    +L  CK+H ++E G +A  R+  L+P   G ++++ N+YA A  
Sbjct: 714 PFGDQSVFPWIT----LLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGK 769

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W + A VR  M + G +K PG S +E+K  +H F  G T HP+S  I+  LE L +E+K 
Sbjct: 770 WPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKR 829

Query: 720 AGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AG+V D  + ++D++   +E+LL  HSEKLAIAFGL++++ G  + I KNLRVC DCH+A
Sbjct: 830 AGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSA 889

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           TK+IS + GREI+VRD +RFH F+ G CSC D+W
Sbjct: 890 TKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 164/581 (28%), Positives = 282/581 (48%), Gaps = 19/581 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A L+  C  L +L   RRI  LI+++G+        +L++++CK  S  +A  VF+ I D
Sbjct: 44  AALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQD 103

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG---DVGEIRRG 157
           K    + +++   A+     +A      M+   V P    Y  +L  CG   +V  IR  
Sbjct: 104 KSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRAR 163

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
            E  G L      LD+   T V+N Y KCG ++ A+ +FD +  RD   WN +++    +
Sbjct: 164 VEACGSL-----ELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAH 218

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              + AL+L  +M   G   +  T V+ L A  +         +H +A     D+   V 
Sbjct: 219 EQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQ 278

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           TALV+MY K G+V+ A  +F+ ++ R+VVSWN+M+ A    G  ++A + F++ML  G  
Sbjct: 279 TALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGEL 338

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG---TDVSMTNSLISMYSKCKKVDRA 394
           P+ +T +  L+AC     L+ G FV  L  +   G    DV M  ++++MYS+CK    A
Sbjct: 339 PSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSA 398

Query: 395 ADIFSKLQGK----TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
                 L+      +++ WN ++  Y +N +  EA   F  M    +  D+ ++++V  A
Sbjct: 399 FSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNA 458

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
               + +   KWIH+L+  S   +   V  AL+ MYA+ G++  AR +FD M  R+V +W
Sbjct: 459 CGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISW 518

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
             M+  +   GL + A+ +F  +L     PN++TF   ++AC +   +        +   
Sbjct: 519 TAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAA-KLVQACLS 577

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           + G    ++    ++  LG+ G L E  +F Q M ++  ++
Sbjct: 578 ETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS 618



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 257/516 (49%), Gaps = 19/516 (3%)

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
           +DD +     +  L+  C  + ++ +G+ IHG ++ NG  +  F    ++ MY KCG  E
Sbjct: 33  FDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPE 92

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           EA  +F  + ++ +V+W +++   A++G  + A  L   M  +G   + +T V++L A  
Sbjct: 93  EARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACG 152

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           +   +   +A          D IV  +TA+++ Y KCG +++A  VFDG+  R+   WN+
Sbjct: 153 HPWEVDTIRARVEACGSLELDVIV--ATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNA 210

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           MI+  V     +EA+ +F++M   GV P   T + AL+AC    D    + +H    +L 
Sbjct: 211 MISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELA 270

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              D  +  +L++MY K  KVD A +IF ++Q + +VSWNAM+   A NG  ++A   F 
Sbjct: 271 GDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFR 330

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR-SCFEKNVFVM--TALIDMYA 487
           +M      P   T V+++ A    + +++  ++  L +   C  ++V V+  TA+++MY+
Sbjct: 331 EMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYS 390

Query: 488 KC----GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           +C     A  ++  L    ++  +  WN ++  Y  +   + A  +F  ML G    + +
Sbjct: 391 RCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450

Query: 544 TFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
           + +   +AC  S  +E+G  IH   +  +     PV +   A+V +  R G L +A +  
Sbjct: 451 SLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQN---ALVTMYARLGSLEDAREIF 507

Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
             M     I+ + AM+G   +H  + L  +A  R+F
Sbjct: 508 DAMTTRNVIS-WTAMVG---VHSQLGLNREAL-RIF 538



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 144/309 (46%), Gaps = 14/309 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL++ + I  L+ +S L  +   Q  LV+++ +  SL DA  +F+ +  +    +  M+ 
Sbjct: 464 SLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVG 523

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            +++     +A+     +  + VAP    +T +L  CG++  I   K +   L   GF  
Sbjct: 524 VHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFG 583

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++    G++    KCG +EE    F  M  ++ VSWNT +A  AQ+G     ++L   M 
Sbjct: 584 NVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQ 643

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVH-GYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            EG     +T++ +L + ++ G +  G +      +  GF +     + ++D+ ++ G +
Sbjct: 644 LEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWL 703

Query: 291 ETA-----RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---T 342
           E A     RL F     ++V  W +++      G+ E   R  Q++L  G+ P +     
Sbjct: 704 EHAEEFVKRLPFG---DQSVFPWITLLCGCKLHGDLERGGRATQRIL--GLNPGSTGPYL 758

Query: 343 IMEALHACA 351
           +M  L+A A
Sbjct: 759 VMHNLYAGA 767


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/687 (34%), Positives = 398/687 (57%), Gaps = 7/687 (1%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A L+  C+ L+ L   ++I   ++KS        Q  +++++ K  SL DA +VF+ +P+
Sbjct: 67  AYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPE 126

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    + +++ GY++     +A+ F  +M    V P  + +  ++K C  +G+I  G+++
Sbjct: 127 RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQL 186

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++ + F   + A   +++MY K   I +A  +F RM  RDL+SW +++AGF+Q G+ 
Sbjct: 187 HAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYE 246

Query: 221 ELALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
             AL     M  +G     +FI   S+  A +++     G+ +HG +++ G    V    
Sbjct: 247 LEALCYFKEMLHQGVYLPNEFI-FGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGC 305

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +L DMYAKCG +  AR+VF  +   ++V+WN++IA +  GG+ +EA+  F +M  QG+ P
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             +T+   L AC    +L +G+ VH  ++++ L  DV + N+L++MY+KC ++  A   F
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425

Query: 399 SKLQ-GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
            +++    LVSWNA++    ++ +  E       M     +PD  T+ +V+ A AE   I
Sbjct: 426 EEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSI 485

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
                +H   +++    +  V   LID+YAKCG++ TA  +FD M    V +W+ +I GY
Sbjct: 486 EIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGY 545

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
              G G+ A++LF  M     KPN +TF+  ++ACSH GLVEEG   + +++K++GI P 
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPT 605

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
            +H   MVDLL RAG LNEA  FI +M  +P I V+  +L ACK H NV++G++AA  + 
Sbjct: 606 REHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENIL 665

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           ++DP     HVLL NIYA+   W+ +A++R++M+++G++K PG S +E+K+ +H F+   
Sbjct: 666 KIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVED 725

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVP 724
           + HP+  +IYT LE L+ ++  AGYVP
Sbjct: 726 SLHPERNKIYTMLEELLLQMLDAGYVP 752



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 242/485 (49%), Gaps = 14/485 (2%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y YL+  C  +  +  GK+IH  ++ +    DL     ++NMY KC  +++A K+FD M
Sbjct: 65  TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PER++VSW +++AG++QNG    AL+   +M + G   D  T  SI+ A +++G + +G+
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H + +++ F + +    AL+ MY K   +  A  VF  M +R+++SW SMIA + + G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 320 NPEEAMRIFQKMLDQGVE-PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
              EA+  F++ML QGV  P          AC+ L   E G  +H +  +  LG DV   
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
            SL  MY+KC  +  A  +F ++    LV+WNA+I G+A  G   EA+ +F +MR + + 
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PD  T+ S++ A    S +     +H  + +   + +V V   L+ MYAKC  +  A   
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424

Query: 499 FDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           F+ M     + +WN ++     H   +    L   M     +P+ IT    + A + +  
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 558 VEEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +E G  +H +   T L  D  +         ++DL  + G L  A      M I P +  
Sbjct: 485 IEIGNQVHCYALKTGLNCDTSVT------NGLIDLYAKCGSLKTAHKIFDSM-INPDVVS 537

Query: 613 FGAML 617
           + +++
Sbjct: 538 WSSLI 542



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 200/391 (51%), Gaps = 8/391 (2%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T   ++ A + + SL  GK +H + +++     + +   +++MY KC  ++ A+ VFD M
Sbjct: 65  TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             RNVVSW S+IA Y + G    A+  + +ML  GV P   T    + AC+ LGD+  G 
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + + + G  +   N+LISMY+K   +  A D+FS++  + L+SW +MI G++Q G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 421 RVNEALNYFCKMRSKNIK-PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              EAL YF +M  + +  P+ F   SV  A + L    Y + +H + I+    ++VF  
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            +L DMYAKCG +  AR +F  +    +  WN +I G+   G  K A+  F++M      
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 540 PNDITFLCAISACSHSGLVEEGIH---YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
           P++IT    + AC+    + +G+    Y   +  D  + PV +    ++ +  +   L +
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDV-PVCN---TLLTMYAKCSELRD 420

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           A  F ++M     +  + A+L AC  H   E
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMRHDQAE 451


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 359/609 (58%), Gaps = 7/609 (1%)

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
           SWN  +   A       ++ L   M   G   D  +   IL + A++     G+ +H + 
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEE 323
           +R G ++   V TAL+ MY KCG VE AR VF+     S+  V +N++I+ Y       +
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A  +F++M + GV   +VTI+  +  C     L  G  +H    +    ++V++ NS I+
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC  V+    +F ++  K L++WNA+I GY+QNG   + L  F +M+S  + PD FT
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           +VSV+ + A L   +  + +  LV  + F  NVF+  ALI MYA+CG +  ARA+FD+M 
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            + + +W  MI  YG HG+G+  + LF+ M++   +P+   F+  +SACSHSGL ++G+ 
Sbjct: 317 VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 376

Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
            F ++K++Y +EP  +HY  +VDLLGRAGRL+EA +FI  MP+EP   V+GA+LGACKIH
Sbjct: 377 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436

Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
           KNV++ E A  ++ E +P   GY+VL++NIY+ +   + + ++R +M ++  +K PG S 
Sbjct: 437 KNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 496

Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSS 743
           VE K +VH F +G   H Q++ ++  L+ L   +       D +   +V    +E     
Sbjct: 497 VEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE----- 551

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSE+LAIAFG+LNS PG+ I + KNLRVC DCH   K +S +  R  +VRD  RFH FK+
Sbjct: 552 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKD 611

Query: 804 GVCSCGDYW 812
           GVCSC DYW
Sbjct: 612 GVCSCKDYW 620



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 226/461 (49%), Gaps = 6/461 (1%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++  L+  A  +   +++S    M     +P  +++ ++LK C  +     G+++H  +I
Sbjct: 18  WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL--VSWNTIVAGFAQNGFAELA 223
             G   + F +T +++MY KCG +E+A K+F+  P      V +N +++G+  N     A
Sbjct: 78  RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             +  RM E G   D +TI+ ++P       L +G+++HG  ++ G  S V V  + + M
Sbjct: 138 AFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITM 197

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG VE+ R +FD M  + +++WN++I+ Y + G   + + +F++M   GV P   T+
Sbjct: 198 YMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTL 257

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  L +CA LG  + G  V +L++      +V ++N+LISMY++C  + +A  +F  +  
Sbjct: 258 VSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPV 317

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKW 462
           K+LVSW AMI  Y  +G     L  F  M  + I+PD    V V+ A +   +  +  + 
Sbjct: 318 KSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 377

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
             A+      E      + L+D+  + G +  A    D M  E     W  ++     H 
Sbjct: 378 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHK 437

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
               A   F K++E   +P +I +   +S        +EGI
Sbjct: 438 NVDMAELAFAKVIE--FEPMNIGYYVLMSNIYSDSKNQEGI 476



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 186/368 (50%), Gaps = 16/368 (4%)

Query: 45  LLLEVCTSLKELRRILPL--------IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
            +L+ C SL      LP+        +I+ G   +    T L+S++CK   + DA +VFE
Sbjct: 55  FILKSCASLS-----LPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFE 109

Query: 97  PIP--DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
             P   +L   Y+ ++ GY   + + DA     RM+   V+        L+ +C     +
Sbjct: 110 ENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYL 169

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G+ +HG+ +  G   ++  +   + MY KCG +E   ++FD MP + L++WN +++G+
Sbjct: 170 WLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGY 229

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           +QNG A   L+L  +M   G   D  T+VS+L + A++G+ +IG+ V       GF   V
Sbjct: 230 SQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNV 289

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            +S AL+ MYA+CG +  AR VFD M  +++VSW +MI  Y   G  E  + +F  M+ +
Sbjct: 290 FLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKR 349

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDR 393
           G+ P     +  L AC+  G  ++G+ + + +  + KL       + L+ +  +  ++D 
Sbjct: 350 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 409

Query: 394 AADIFSKL 401
           A +    +
Sbjct: 410 AMEFIDSM 417


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/709 (34%), Positives = 389/709 (54%), Gaps = 41/709 (5%)

Query: 108 TMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN 167
           T+L    +   +  A+  L + +  D+   V     +++ C  +G +  G+ IH  +   
Sbjct: 8   TLLSKRQQLGQIAAAIDALQKRKDADLKECVR----VIQSCARLGALAEGRRIHQLMRRV 63

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
           G   D++    +V MY KCG +EEA  +F+  P +++ SW  ++   AQ+G ++ AL L 
Sbjct: 64  GLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALF 123

Query: 228 TRMHEEGRRGDFITIVSILPAV-ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
             M ++G +   ++  + + A  A    L  G+A+H    R GF   V  +T+LV MY+K
Sbjct: 124 YEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSK 183

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG +E +   F+ M   N VSWN+MIAA+ E     EA+R  QKM            +E 
Sbjct: 184 CGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMF-----------LEG 232

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
           + AC                      +DV +  +L++MY+KC  +  A   F KLQ   +
Sbjct: 233 IRAC----------------------SDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNI 270

Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           ++WN +I  Y Q+    EA+  F +M    ++ D  T ++++ A      +   + IHA 
Sbjct: 271 ITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHAC 330

Query: 467 VIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
           V       N   +   +++MY KCG++  A A+F  M++  V  WN MI  YG HG    
Sbjct: 331 VREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSE 390

Query: 526 AVELFNKMLEGPTKPNDITFLCAISA-CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
           A+  +  M E    P+D T++  I A C+++GL EE   YF S+++D+G+ P   HYG M
Sbjct: 391 ALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCM 450

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           V+ LG+AGRL++A   IQ MP EP +  + + L  C+ H +++ G+ AA     +DP+  
Sbjct: 451 VESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEAS 510

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +V LA I+A A  + + +++R +M  +G++K  G S+++L   V+ F +G   +P+SK
Sbjct: 511 TGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSK 570

Query: 705 RIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTI 763
            I+  L+ L  E+K+AGY PD   + HDVE   +E LL +HSE+LAIAFG++++SPG+ +
Sbjct: 571 EIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPL 630

Query: 764 HIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I KNLRVCGDCH  TK  S +T REIIVRD +RFH FKNG CSC D+W
Sbjct: 631 RIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 251/567 (44%), Gaps = 82/567 (14%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L E RRI  L+ + GL         LV ++ K  SL +A  VFE  P K    +  ++ 
Sbjct: 49  ALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILIT 108

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLIVNGFS 170
             A+     +A++    M    + P   ++T  +  C    E +  G+ +H  L   GF 
Sbjct: 109 VCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQ 168

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
             + A T +V+MY+KCG +EE+ + F+ M E + VSWN ++A FA++     AL  + +M
Sbjct: 169 DAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKM 228

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             EG                               +RA  D  V V T LV+MYAKC  +
Sbjct: 229 FLEG-------------------------------IRACSD--VVVGTTLVNMYAKCSGL 255

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
             A   F  ++  N+++WN +I+AYV+    +EAM +F++ML  G+E   VT +  L AC
Sbjct: 256 HDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGAC 315

Query: 351 ADLGDLERGIFVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
                LE G  +H  + +  L ++   + N +++MY KC  +  A  +F  +    +++W
Sbjct: 316 CVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAW 375

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N MI  Y Q+G  +EAL ++  M+ + + PD +T VSVI A                   
Sbjct: 376 NTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDA------------------- 416

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-----WNVMIDGYGTHGLGK 524
           SC               A  G    A A F  M + H        +  M++  G  G   
Sbjct: 417 SC---------------ANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLS 461

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP-VMDHYGA 583
            A  L   M   P +P+ +T+   ++ C   G ++ G     + K    I+P     Y A
Sbjct: 462 DAETLIQCM---PFEPDVLTWTSFLANCRSHGDMKRGK---LAAKGAIRIDPEASTGYVA 515

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           +  +   AG   EA   I+K+ ++ GI
Sbjct: 516 LARIHADAGDFQEA-SRIRKLMLDRGI 541


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/608 (37%), Positives = 345/608 (56%), Gaps = 71/608 (11%)

Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
           V+++L+  Y + G    AR V DGM  R VV W+++IAA+   G+ E A  + ++M   G
Sbjct: 57  VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116

Query: 336 VEPTNVT-----------------------------------IMEALHACADLGDLERGI 360
           VEP  +T                                   +  AL A  D+GD+  G 
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGE 176

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR--------------------------- 393
            +H  + +     D  +  +LI MY KC + D                            
Sbjct: 177 QLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNA 236

Query: 394 ----AADIFSKLQGK----TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
               A  +F +  G+     +VSW +++    QNGR  EA++ F +M+S+ I+P+S T+ 
Sbjct: 237 QVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIP 296

Query: 446 SVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER 505
            V+PA A ++ + + +  H   +R  F  +++V +AL+DMYAKCG V  AR +F+ M  R
Sbjct: 297 CVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR 356

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
           +V +WN MI GY  HG  + AV LF  M     KP+ +TF C + ACS +G  EEG  YF
Sbjct: 357 NVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYF 416

Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
             ++  +GI P M+HY  MV LLGRAG+L++A+D I +MP EP   ++G++LG+C++H N
Sbjct: 417 NEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGN 476

Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
           V L E AA  LF+L+P+  G +VLL+NIYA+  MWD + ++R +M+  GL+K  GCS +E
Sbjct: 477 VVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIE 536

Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSH 744
           +KN+VH   +G + HP    I   L+ L  E++  G+ P T+ + HDVE+  ++++LS H
Sbjct: 537 IKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVH 596

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SEKLA+A GL+++S G+ + + KNLR+CGDCH A K+IS    REI VRD +RFH FK+G
Sbjct: 597 SEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDG 656

Query: 805 VCSCGDYW 812
            CSC DYW
Sbjct: 657 KCSCADYW 664



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 208/460 (45%), Gaps = 78/460 (16%)

Query: 13  TNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQH 72
           T ST +  L+  +H        P      PSAL  + C++L+  R +      +G+    
Sbjct: 3   TRSTTSSVLNFLRHV-----SFPPDPRLLPSAL--KSCSALRLARALHAAAAVAGVSRDA 55

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
              + L+  + ++ + +DA  V + +P +    +  ++  +A     + A   L RMR D
Sbjct: 56  FVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSD 115

Query: 133 DVAPVVYNYTYL-----------------------------------LKVCGDVGEIRRG 157
            V P V  +  L                                   L   GDVG++  G
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVG 175

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD-------------------- 197
           +++HG ++  G  LD    T +++MY KCG+ +E  ++FD                    
Sbjct: 176 EQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRN 235

Query: 198 ---------------RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
                          R  E ++VSW +IVA   QNG    A+DL   M  EG   + +TI
Sbjct: 236 AQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTI 295

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             +LPA AN+ +L  G++ H +++R GF   + V +ALVDMYAKCGRV  AR++F+ M  
Sbjct: 296 PCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPY 355

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IF 361
           RNVVSWN+MI  Y   G  E A+R+F+ M     +P  VT    L AC+  G  E G  +
Sbjct: 356 RNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSY 415

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +++  +  +   +     ++++  +  K+D A DI +++
Sbjct: 416 FNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQM 455



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 169/340 (49%), Gaps = 40/340 (11%)

Query: 154 IRRGKEIHGQLIVNGFS-LDLFAMTGVVNMYAKCGQIEEAYKMFDRMP----ERDLVSWN 208
           +R G     + +++G     +   + ++  +A  G  E A+ + +RM     E ++++WN
Sbjct: 66  LRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWN 125

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            +V+G  ++G A  A+  + RMH EG   D   +   L AV +VG + +G+ +HGY ++A
Sbjct: 126 GLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKA 185

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFD---------------GMKSR---------- 303
           G      V+TAL+DMY KCGR +    VFD               G+             
Sbjct: 186 GCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLF 245

Query: 304 ----------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
                     NVVSW S++A  V+ G   EA+ +F++M  +G+EP +VTI   L A A++
Sbjct: 246 REFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANI 305

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             L  G   H    +     D+ + ++L+ MY+KC +V  A  IF  +  + +VSWNAMI
Sbjct: 306 AALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMI 365

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
            GYA +G    A+  F  M+S   KPD  T   V+ A ++
Sbjct: 366 GGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQ 405



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 2/202 (0%)

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           +AV     M+ + + P       +L    ++  +  G+  H   +  GF  D++  + +V
Sbjct: 275 EAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALV 334

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MYAKCG++ +A  +F+ MP R++VSWN ++ G+A +G AE A+ L   M     + D +
Sbjct: 335 DMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLV 394

Query: 241 TIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           T   +L A +  G    G++  +    + G    +     +V +  + G+++ A  + + 
Sbjct: 395 TFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQ 454

Query: 300 MK-SRNVVSWNSMIAAYVEGGN 320
           M    +   W S++ +    GN
Sbjct: 455 MPFEPDGCIWGSLLGSCRVHGN 476



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           + LV ++ K   + DA  +FE +P +    ++ M+ GYA     ++AV     M+     
Sbjct: 331 SALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEK 390

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           P +  +T +L  C   G    G+    ++   +G S  +     +V +  + G++++AY 
Sbjct: 391 PDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYD 450

Query: 195 MFDRMP-ERDLVSWNTIVAGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSI 245
           + ++MP E D   W +++     +G    AE+A + + ++  E   G+++ + +I
Sbjct: 451 IINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPE-NAGNYVLLSNI 504



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 3/131 (2%)

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           +R  +  PD   + S   AL   S +R A+ +HA    +   ++ FV ++L+  Y + GA
Sbjct: 14  LRHVSFPPDPRLLPS---ALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGA 70

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
              AR++ D M  R V  W+ +I  + +HG  + A  L  +M     +PN IT+   +S 
Sbjct: 71  TADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSG 130

Query: 552 CSHSGLVEEGI 562
            + SG   + +
Sbjct: 131 LNRSGRARDAV 141


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/706 (33%), Positives = 386/706 (54%), Gaps = 11/706 (1%)

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           L   +K   L++A  FL  M    V+   Y+Y  L + C ++  +  G+ +H ++ +   
Sbjct: 55  LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIE 114

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           +  +     V+ MY +C  +E+A K+FD M E + VS  T+++ +A+ G  + A+ L + 
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M   G +       ++L ++ N  +L  G+ +H + +RAG  S  ++ T +V+MY KCG 
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +  A+ VFD M  +  V+   ++  Y + G   +A+++F  ++ +GVE  +      L A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           CA L +L  G  +H  + +L L ++VS+   L+  Y KC   + A   F +++    VSW
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKP-DSFTMVSVIPALAELSVIRYAKWIHALVI 468
           +A+I GY Q  +  EA+  F  +RSKN    +SFT  S+  A + L+       +HA  I
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +     + +  +ALI MY+KCG +  A  +F+ M+   +  W   I G+  +G    A+ 
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF KM+    KPN +TF+  ++ACSH+GLVE+G H   ++ + Y + P +DHY  M+D+ 
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
            R+G L+EA  F++ MP EP    +   L  C  HKN+ELGE A   L +LDP++   +V
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           L  N+Y  A  W++ A++  +M ++ L+K   CS ++ K ++H F  G   HPQ++ IY 
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE 654

Query: 709 FLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLN--SSPGSTIHIR 766
            L+     ++   +  +           +E LL  HSE+LAIAFGL++   +  + I + 
Sbjct: 655 KLKEFDGFMEGDMFQCNMTE-------RREQLL-DHSERLAIAFGLISVHGNAPAPIKVF 706

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLR C DCH   K++SLVTG EI++RD  RFH FK G CSC DYW
Sbjct: 707 KNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 242/497 (48%), Gaps = 9/497 (1%)

Query: 46  LLEVCTSLKELR--RILPLIIKSGLCDQH-LFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L E C  L+ L   R+L   ++ G+ +   L Q  ++ ++C+  SL DA ++F+ + +  
Sbjct: 89  LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
                TM+  YA+   LD AV     M      P    YT LLK   +   +  G++IH 
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I  G   +    TG+VNMY KCG +  A ++FD+M  +  V+   ++ G+ Q G A  
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L   +  EG   D      +L A A++  L +GK +H    + G +S V+V T LVD
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-V 341
            Y KC   E+A   F  ++  N VSW+++I+ Y +    EEA++ F+ +  +     N  
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T      AC+ L D   G  VH    +  L       ++LI+MYSKC  +D A ++F  +
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +V+W A I G+A  G  +EAL  F KM S  +KP+S T ++V+ A +   ++   K
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508

Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGT 519
             +  ++ +      +     +ID+YA+ G +  A + + +M  E    +W   + G  T
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568

Query: 520 HG---LGKAAVELFNKM 533
           H    LG+ A E   ++
Sbjct: 569 HKNLELGEIAGEELRQL 585



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 62/131 (47%)

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N  ++  +++ ++NEA  +  +M    +   S++   +  A  EL  + + + +H  +  
Sbjct: 52  NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                +V +   ++ MY +C ++  A  LFD M+E +  +   MI  Y   G+   AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171

Query: 530 FNKMLEGPTKP 540
           F+ ML    KP
Sbjct: 172 FSGMLASGDKP 182


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/722 (35%), Positives = 386/722 (53%), Gaps = 81/722 (11%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAELALDLVTR 229
           D+ A T +++ Y+  G I+ A+++F+  P   RD VS+N ++  F+ +     AL L  +
Sbjct: 61  DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKC- 287
           M   G   D  T  S+L A++ +       + +H    + G  S+ +V  AL+  Y  C 
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180

Query: 288 -----------------------GRVE------------------TARLVFDGMKSRNVV 306
                                  GR +                   AR + +GM     V
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +WN+MI+ YV  G  EEA  + ++M   G++    T    + A ++ G    G  VH  +
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300

Query: 367 DQLKLGTD----VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA----------- 411
            +  +       +S+ N+LI++Y++C K+  A  +F K+  K LVSWNA           
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRI 360

Query: 412 --------------------MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
                               MI G AQNG   E L  F +M+ + ++P  +     I + 
Sbjct: 361 EEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           + L  +   + +H+ +I+   + ++ V  ALI MY++CG V  A  +F  M      +WN
Sbjct: 421 SVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWN 480

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI     HG G  A++L+ KML+    P+ ITFL  +SACSH+GLV+EG HYF +++  
Sbjct: 481 AMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVC 540

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           YGI P  DHY  ++DLL RAG  +EA +  + MP EPG  ++ A+L  C IH N+ELG +
Sbjct: 541 YGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQ 600

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA+RL EL P + G ++ L+N+YAA   WD++A+VR +M ++G++K PGCS +E++N VH
Sbjct: 601 AADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVH 660

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAI 750
            F      HP+   +Y +LE L+ E++  GYVPDT  + HD+E   +E  LS+HSEKLA+
Sbjct: 661 VFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAV 720

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGD 810
            +G++    G+TI + KNLR+CGDCHNA KYIS V  REIIVRD  RFH F+NG CSC +
Sbjct: 721 VYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSN 780

Query: 811 YW 812
           YW
Sbjct: 781 YW 782



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 35/319 (10%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ + + + L  A  + E + D +   ++ M+ GY      ++A   L RM    + 
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHG----QLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
              Y YT ++    + G    G+++H      ++       L     ++ +Y +CG++ E
Sbjct: 272 LDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVE 331

Query: 192 AYKMFDRMPERDLVSWNTI-------------------------------VAGFAQNGFA 220
           A ++FD+MP +DLVSWN I                               ++G AQNGF 
Sbjct: 332 ARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFG 391

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E  L L  +M  EG           + + + +GSL  G+ +H   ++ G DS ++V  AL
Sbjct: 392 EEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNAL 451

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           + MY++CG VE A  VF  M   + VSWN+MIAA  + G+  +A+++++KML + + P  
Sbjct: 452 ITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDR 511

Query: 341 VTIMEALHACADLGDLERG 359
           +T +  L AC+  G ++ G
Sbjct: 512 ITFLTILSACSHAGLVKEG 530



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 199/501 (39%), Gaps = 123/501 (24%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG--------- 299
           +A +      +AVH + + +GF     +   L+D Y K   +  AR +FD          
Sbjct: 6   LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65

Query: 300 ------------------------MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
                                   M  R+ VS+N+MI A+    +   A+++F +M   G
Sbjct: 66  TTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLG 125

Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLG--TDVSMTNSLISMYSKC---- 388
             P   T    L A + + D E      +L  +  K G  +  S+ N+L+S Y  C    
Sbjct: 126 FVPDPFTFSSVLGALSLIADEE--THCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183

Query: 389 ------------KKVDRAA--------------------DIFSK---LQGKT---LVSWN 410
                       K  D A                     D+ +    L+G T    V+WN
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWN 243

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           AMI GY   G   EA +   +M S  I+ D +T  SVI A +   +    + +HA V+R+
Sbjct: 244 AMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT 303

Query: 471 CFEKN----VFVMTALIDMYAKCGAVGTARALFDMM----------------NERHVT-- 508
             + +    + V  ALI +Y +CG +  AR +FD M                N R +   
Sbjct: 304 VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEA 363

Query: 509 -------------TWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSH 554
                        TW VMI G   +G G+  ++LFN+M LEG  +P D  +  AI++CS 
Sbjct: 364 NSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEG-LEPCDYAYAGAIASCSV 422

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
            G ++ G    + + +  G +  +    A++ +  R G +  A      MP    ++ + 
Sbjct: 423 LGSLDNGQQLHSQIIQ-LGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS-WN 480

Query: 615 AMLGACKIH----KNVELGEK 631
           AM+ A   H    + ++L EK
Sbjct: 481 AMIAALAQHGHGVQAIQLYEK 501



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 10/288 (3%)

Query: 50  CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
           C  L E RR+   +    L   +   +  V+       + +A  +F  +P +    +  M
Sbjct: 326 CGKLVEARRVFDKMPVKDLVSWNAILSGCVNA----RRIEEANSIFREMPVRSLLTWTVM 381

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           + G A+    ++ +    +M+ + + P  Y Y   +  C  +G +  G+++H Q+I  G 
Sbjct: 382 ISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGH 441

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
              L     ++ MY++CG +E A  +F  MP  D VSWN ++A  AQ+G    A+ L  +
Sbjct: 442 DSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEK 501

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY-AMRA--GFDSIVNVSTALVDMYAK 286
           M +E    D IT ++IL A ++ G ++ G+  H +  MR   G     +  + L+D+  +
Sbjct: 502 MLKEDILPDRITFLTILSACSHAGLVKEGR--HYFDTMRVCYGITPEEDHYSRLIDLLCR 559

Query: 287 CGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
            G    A+ V + M        W +++A     GN E  ++   ++L+
Sbjct: 560 AGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLE 607


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/558 (41%), Positives = 331/558 (59%), Gaps = 36/558 (6%)

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G +  ARLVF+ + +    + NS+I  Y     P +A+  +Q M+ QG++P   T     
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            +C   G L  G  +H    +L   +D  + N+L++MYS C  +  A  +F K+  K++V
Sbjct: 86  KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 408 SWNAMILGYAQ---------------------------NGRVN-----EALNYFCKMRSK 435
           SW  MI  YAQ                           NG V      EAL+ F +M+  
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            +K D  TM S++ A   L  +   KW+H  + +   E +V + TAL+DMYAKCG++ +A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F  M E+ V TW  +I G    G G  A+ELF++M     KP+ ITF+  ++ACSH+
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GLV EGI YF S+   YGI+P ++HYG MVD+LGRAGR+ EA D IQ MP+ P   V   
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC+IH N+ + E+AA +L ELDP  GG +VLL+NIY++   W+   K+R +M ++ +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVED 734
           +K PGCS +E+   VH F  G   HPQS  IY  L+ ++  +K+AGYVPD + +  D+++
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +EN LS HSEKLAIAFGLL+++PG+ I + KNLRVC DCH+A K+IS V  REIIVRD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562

Query: 795 MHRFHCFKNGVCSCGDYW 812
            +RFH F  G CSC D+W
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 39/364 (10%)

Query: 74  FQTKLVSLFCKYN---SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
           F    +  FC  +   SL  A  VF  IP+      +++++GY        A+ F   M 
Sbjct: 11  FSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMM 70

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
              + P  + +  L K CG + E   GK++H      GF+ D +    ++NMY+ CG + 
Sbjct: 71  LQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLV 127

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQ---------------------------NGFAE-- 221
            A K+FD+M  + +VSW T++  +AQ                           NG  E  
Sbjct: 128 SARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDS 187

Query: 222 ---LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
               AL L   M   G +GD +T+ S+L A  ++G+L +GK +H Y  +   +  V + T
Sbjct: 188 DYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGT 247

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALVDMYAKCG +E+A  VF  M  ++V++W ++I      G   +A+ +F +M    V+P
Sbjct: 248 ALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKP 307

Query: 339 TNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +T +  L AC+  G +  GI + + + ++  +   +     ++ M  +  ++  A D+
Sbjct: 308 DAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDL 367

Query: 398 FSKL 401
              +
Sbjct: 368 IQNM 371



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 178/367 (48%), Gaps = 38/367 (10%)

Query: 171 LDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
           +D F+ + +V   A    G +  A  +F+++P     + N+I+ G+        A+    
Sbjct: 8   VDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQ 67

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M  +G   D  T  S+  +    G L  GK +H ++ + GF S   +   L++MY+ CG
Sbjct: 68  LMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCG 124

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAY--------------------------------V 316
            + +AR VFD M +++VVSW +MI AY                                V
Sbjct: 125 CLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHV 184

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
           E  + EEA+ +F +M   GV+   VT+   L AC  LG LE G ++H  +++ K+  DV+
Sbjct: 185 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 244

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           +  +L+ MY+KC  ++ A  +F ++  K +++W A+I+G A  G+  +AL  F +M+   
Sbjct: 245 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 304

Query: 437 IKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           +KPD+ T V V+ A +   ++     + +++  +   + ++     ++DM  + G +  A
Sbjct: 305 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364

Query: 496 RALFDMM 502
             L   M
Sbjct: 365 EDLIQNM 371



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 39/340 (11%)

Query: 35  PSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
           P R +  PS  L + C  L E +++     K G       Q  L++++     L  A +V
Sbjct: 76  PDR-FTFPS--LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKV 132

Query: 95  FEPIPDKLDALYHTMLKGYAKF--------------------------------ASLDDA 122
           F+ + +K    + TM+  YA++                                +  ++A
Sbjct: 133 FDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEA 192

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +S    M+   V         LL  C  +G +  GK +H  +      +D+   T +V+M
Sbjct: 193 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 252

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG IE A ++F  MPE+D+++W  ++ G A  G    AL+L   M     + D IT 
Sbjct: 253 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 312

Query: 243 VSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           V +L A ++ G +  G A  +    + G    +     +VDM  + GR+  A  +   M 
Sbjct: 313 VGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372

Query: 302 -SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            + +      +++A    GN   A R  Q++++  ++P N
Sbjct: 373 MAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE--LDPKN 410


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/679 (34%), Positives = 388/679 (57%), Gaps = 6/679 (0%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C    SLK+ + I   ++  GL +       L++ +   +    A  VF+ + +  
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68

Query: 103 D-ALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           + +L++ ++ GY K     +A+    ++  Y  + P  Y Y  + K CG +     GK I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  LI  G  +D+   + +V MY KC   E+A  +F+ MPE+D+  WNT+++ + Q+G  
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + AL+    M   G   + +TI + + + A +  L  G  +H   + +GF     +S+AL
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VDMY KCG +E A  +F+ M  + VV+WNSMI+ Y   G+    +++F++M ++GV+PT 
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T+   +  C+    L  G FVH    + ++  DV + +SL+ +Y KC KV+ A  IF  
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKL 368

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +    +VSWN MI GY   G++ EAL  F +MR   ++ D+ T  SV+ A ++L+ +   
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKG 428

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH L+I    + N  VM AL+DMYAKCGAV  A ++F  + +R + +W  MI  YG+H
Sbjct: 429 KEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSH 488

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A+ELF +ML+   KP+ + FL  +SAC H+GLV+EG +YF  +   YGI P ++H
Sbjct: 489 GHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEH 548

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           Y  ++DLLGRAGRL+EA++ +Q+ P I   + +   +  AC++H+N++LG + A  L + 
Sbjct: 549 YSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDK 608

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DPD+   ++LL+N+YA+A  WD++  VR+ M++ GL+K PGCS +E+  ++  F+     
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668

Query: 700 HPQSKRIYTFLETLIDEIK 718
           H   + ++  L  L D ++
Sbjct: 669 HLHLELVFKCLSYLSDHME 687



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 132/267 (49%), Gaps = 7/267 (2%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L AC +   L++G  +H+ +  L L  D+ +  +LI+ Y  C   D A  +F  ++
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65

Query: 403 GKTLVS-WNAMILGYAQNGRVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAELSVIRYA 460
               +S WN ++ GY +N    EAL  F K +    +KPDS+T  SV  A   L      
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IH  +I++    ++ V ++L+ MY KC A   A  LF+ M E+ V  WN +I  Y   
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  K A+E F  M     +PN +T   AIS+C+    +  G+     L    G   ++D 
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS-GF--LLDS 242

Query: 581 Y--GAMVDLLGRAGRLNEAWDFIQKMP 605
           +   A+VD+ G+ G L  A +  ++MP
Sbjct: 243 FISSALVDMYGKCGHLEMAIEIFEQMP 269



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D+  ++ ++ A      ++  K IH  V+    + ++F+   LI+ Y  C     A+ +F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 500 D-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-TKPNDITFLCAISACS--HS 555
           D M N   ++ WN ++ GY  + +   A+ELF K+L  P  KP+  T+     AC   H 
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
            ++ + IH  T L K  G+   +    ++V + G+     +A     +MP
Sbjct: 122 YVLGKMIH--TCLIKT-GLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP 168


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/778 (31%), Positives = 419/778 (53%), Gaps = 11/778 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD--AARVFEPIPDKLD 103
           LL  CT+L  +  +   I ++        +  L++ +C+    +   AAR+ + +P +  
Sbjct: 8   LLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNA 67

Query: 104 ALYHTMLKGYAKFASLDDAV-SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             Y+ ++  Y++      A+ +F        +    + Y   L  C    ++R GK +H 
Sbjct: 68  VSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHA 127

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +++G    +F    + +MYA CG++ EA ++FD   E D VSWN++++G+ + G  E 
Sbjct: 128 MTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREE 187

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSL--RIGKAVHGYAMRAGFDSIVNVSTAL 280
            L + + M   G   +   + SI+   A+   +   I +AVHG  ++AG D+ + +++A+
Sbjct: 188 TLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAM 247

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY------VEGGNPEEAMRIFQKMLDQ 334
           +DMYAK G +  A  +F  +   NV+ +N+MIA +      V      EA+ ++ +M  +
Sbjct: 248 IDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSR 307

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G++P+  T    L AC   G+   G  +H  + +     D  + ++LI +YS    ++  
Sbjct: 308 GMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDG 367

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
              F  L  + +V+W +MI G  QN    +AL  F +     +KPD FTM SV+ A A L
Sbjct: 368 YRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASL 427

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
           +V R  + I  L I+  F +   +  + I M A+ G V      F  M  R V +W+ +I
Sbjct: 428 AVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVI 487

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
             +  HG  + A+ +FN+M+     PN++TFL  ++ACSH GLV++G+ Y+  +K +YG+
Sbjct: 488 SSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGL 547

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
            P + H   +VDLLGRAGRL +A  FI+         V+ ++L +C+IH ++E G+  A+
Sbjct: 548 SPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVAD 607

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           ++ +L+P     +V+L N+Y  A      +K R +M+++G++K PG S +EL++ VHSF 
Sbjct: 608 QIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFV 667

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGL 754
           +G   HP+S  IY  L  ++ +I+      + ++  D     ++NL+  HSEK+A+AFG+
Sbjct: 668 AGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGM 727

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++    + I + KNLRVC DCH+  K IS    REII+RD  RFH F+ G CSCGDYW
Sbjct: 728 IHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/561 (40%), Positives = 330/561 (58%), Gaps = 36/561 (6%)

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YA  GR++ +  +F   ++ +V  W ++I  +   G  E+A+  + +ML QGVEP   T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L  C     +E G  +H    +L   +D+ +   L+ +Y++   V  A  +F  +  
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 404 KTLVS-------------------------------WNAMILGYAQNGRVNEALNYFCKM 432
           K+LVS                               WN MI GY QNG  NEAL  F +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
                KP+  T++SV+ A  +L  +   +W+H+ +  +  + NV V TAL+DMY+KCG++
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             AR +FD ++++ V  WN MI GY   G  + A++LF  M      P +ITF+  +SAC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
            HSG V EG   F  +K +YGIEP ++HYG MV+LLGRAG + +A++ ++ M IEP   +
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +G +LGAC++H  + LGEK    L + +    G ++LL+NIYAA   WD +A++RT+M+ 
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
            G++K PGCS +E+ N+VH F +G   HP+ K IY  LE +   +K+ GY P T+ + HD
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           + +  +E  L  HSEKLAIAFGL+N+ PG+TI I KNLRVC DCH  TK IS +TGR+I+
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFH F NG CSCGDYW
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 172/331 (51%), Gaps = 38/331 (11%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
            +  ++ G+A     + A++F  +M    V P  + ++ +LK+C     I  GK +H Q 
Sbjct: 42  FWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQA 97

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS------------------ 206
           +  GF  DL+  TG++++YA+ G +  A ++FD MPE+ LVS                  
Sbjct: 98  VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 157

Query: 207 -------------WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
                        WN ++ G+ QNG    AL L  RM +   + + +T++S+L A   +G
Sbjct: 158 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 217

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L  G+ VH Y    G    V+V TALVDMY+KCG +E ARLVFD +  ++VV+WNSMI 
Sbjct: 218 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 277

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKL 371
            Y   G  +EA+++F+ M   G+ PTN+T +  L AC   G +  G  IF +K+ D+  +
Sbjct: 278 GYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYGI 336

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
              +     ++++  +   V++A ++   + 
Sbjct: 337 EPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 367



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 180/385 (46%), Gaps = 42/385 (10%)

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YA  G+++ +  +F R     +  W  I+ G A  G  E AL+   +M  +G   +  T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV------------ 290
            SIL     +  +  GKA+H  A++ GFDS + V T L+D+YA+ G V            
Sbjct: 79  SSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 291 -------------------ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
                              + AR++FDGM+ R+ V WN MI  Y + G P EA+ +F++M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
           L    +P  VT++  L AC  LG LE G +VH  ++   +  +V +  +L+ MYSKC  +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           + A  +F K+  K +V+WN+MI+GYA  G   EAL  F  M    + P + T + ++ A 
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 452 AELSVIRYAKW--IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVT 508
                +    W   + +      E  +     ++++  + G V  A  L   MN E    
Sbjct: 315 GHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373

Query: 509 TWNVMIDGYGTHG---LGKAAVELF 530
            W  ++     HG   LG+  VEL 
Sbjct: 374 LWGTLLGACRLHGKIALGEKIVELL 398



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 25/307 (8%)

Query: 62  LIIKSGLCD-----------QHLFQT----KLVSL------FCKYNSLSDAARV-FEPIP 99
           L +++GL D           Q LF T     LVSL      + K+  L DAARV F+ + 
Sbjct: 106 LYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGEL-DAARVLFDGME 164

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           ++    ++ M+ GY +    ++A+    RM      P       +L  CG +G +  G+ 
Sbjct: 165 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 224

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H  +  NG   ++   T +V+MY+KCG +E+A  +FD++ ++D+V+WN+++ G+A  GF
Sbjct: 225 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGF 284

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVST 278
           ++ AL L   M   G     IT + IL A  + G +  G  + +      G +  +    
Sbjct: 285 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYG 344

Query: 279 ALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            +V++  + G VE A  +   M    + V W +++ A    G      +I + ++DQ + 
Sbjct: 345 CMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA 404

Query: 338 PTNVTIM 344
            +   I+
Sbjct: 405 NSGTYIL 411


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/690 (36%), Positives = 381/690 (55%), Gaps = 49/690 (7%)

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
           R  + ++ P  +    L+  C     +R  +  H +L+   F L L +      +  K  
Sbjct: 5   RSLFPELPPAGHALLRLVDSCRAPAHLRSLRAAHARLL---FLLRLPSHPASAAVRVKLI 61

Query: 188 QIEEAYK-------MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR--GD 238
           Q   A         + D  P+R  V +N ++ G         AL L   M  +G     D
Sbjct: 62  QAYAACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPD 121

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T    L + A    L +G+ +H    R G D  V V+ + + MYA+CGR + A  +F+
Sbjct: 122 HYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFE 181

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIMEALHACADLGDLE 357
            M+ R+VVSWN+MI+ +   G    AM +F++++  Q  +P             D G   
Sbjct: 182 EMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKP-------------DAG--- 225

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISM-YSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
                             +M + L SM  ++ + +     +F +++ K L+SWNAM+  Y
Sbjct: 226 ------------------TMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVY 267

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
             N    EA+  F +M+   I+PD+ T+ +V+P+  E+S +   K IH ++ R     ++
Sbjct: 268 TNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSM 327

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            +  AL+DMYA CG +  AR +FD M  R V +W  +I  YG HG G+ A++LF KM   
Sbjct: 328 LLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQ 387

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             +P+ I F+  ++ACSH+GL++ G HYF S+  ++ I P ++HY  MVDLLGRAG + E
Sbjct: 388 GLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIRE 447

Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
           A+DFI  MPI+P   V+GA+LGAC+IH N+++G  AA+ L  L P + GY+VLL+NIYA 
Sbjct: 448 AYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYAR 507

Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           A  W  ++ VR++ME KG++K PG S  EL + VH+F+ G T HPQSK IY  L  L+  
Sbjct: 508 AGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRR 567

Query: 717 IKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDC 775
           I+  GY P+   ++HDVE+  +E  LS HSEKLAIAF L+N++PG+ I I  NLR C DC
Sbjct: 568 IREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDC 627

Query: 776 HNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           H+A K IS + GREII++D++R H  K  +
Sbjct: 628 HHAAKLISTIAGREIILKDVNRIHYMKCNI 657



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 231/511 (45%), Gaps = 87/511 (17%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--PVVYNYTYLLKVCGDV 151
           V +  PD+    ++ +L+G    +   DA+     MR    A  P  Y Y   LK C   
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +  G++IH      G   ++F     ++MYA+CG+ ++AY+MF+ M  RD+VSWN ++
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 212 AGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +GFA  G    A+D+   +   +  + D  T+ SILP+        +GKA          
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS--------MGKA---------- 237

Query: 271 DSIVNVSTALVDMYAKCGRVETARL---VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
                             RVE   L   VFD M+ + ++SWN+M+A Y       EA+ +
Sbjct: 238 ------------------RVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVEL 279

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
           F +M   G+EP  VT+   L +C ++  L  G  +H+++ + ++ + + + N+L+ MY+ 
Sbjct: 280 FMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYAN 339

Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           C  +  A D+F  +  + +VSW ++I  Y ++G   EA++ F KM  + ++PDS   V++
Sbjct: 340 CGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAI 399

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           + A +           HA                L+DM             + M +E H+
Sbjct: 400 LAACS-----------HA---------------GLLDM--------GKHYFYSMTSEFHI 425

Query: 508 TT----WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
                 +  M+D  G  G  + A +    M   P KPN+  +   + AC     ++ G+ 
Sbjct: 426 APKLEHYACMVDLLGRAGCIREAYDFIMVM---PIKPNERVWGALLGACRIHSNMDIGLL 482

Query: 564 YFTSLKKDYGIEPVMDHYGAMV-DLLGRAGR 593
              SL +   + P    Y  ++ ++  RAGR
Sbjct: 483 AADSLLR---LAPKQTGYYVLLSNIYARAGR 510


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/721 (33%), Positives = 391/721 (54%), Gaps = 32/721 (4%)

Query: 65  KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
           K G C +      L++L+ +  S   A RVF  +P +    ++T++ G+A+ A  + A+ 
Sbjct: 171 KQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALE 230

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M+   ++P     + LL  C  +G++++G ++H  L   G S D      ++++Y 
Sbjct: 231 IFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYV 290

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG +E A  +F+     ++V WN I+  F Q      + +L  +M   G R +  T   
Sbjct: 291 KCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPC 350

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL      G + +G+ +H  +++ GF+S + VS  L+DMY+K G +E AR V + +K ++
Sbjct: 351 ILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           VVSW SMIA YV+    ++A+  F++M   G+ P N+ +  A+  CA +  + +G+ +H 
Sbjct: 411 VVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHA 470

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
            +       DVS+ N+L+++Y++C ++  A   F +++ K  ++WN ++ G+AQ+G   E
Sbjct: 471 RVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F +M    +K + FT VS + A A L+ I+  K IHA VI++       V  ALI 
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           +Y KCG+   A+  F  M+ER+  +WN +I     HG G  A++ F++M           
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQM----------- 639

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
                         +EG+ YF S+   YGI P  DHY  ++D+ GRAG+L+ A  F+++M
Sbjct: 640 -------------KKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEM 686

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           PI     V+  +L ACK+HKN+E+GE AA  L EL+P +   +VLL+N YA    W    
Sbjct: 687 PIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRD 746

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           +VR +M  +G++K PG S +E+KN VH+F+ G   HP +++IY FL  + D +   GY  
Sbjct: 747 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 806

Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +   + HD E   ++     HSEKLA+ FGL++  P   + + KNLRV        KY S
Sbjct: 807 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV-------EKYTS 859

Query: 784 L 784
           L
Sbjct: 860 L 860



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/559 (29%), Positives = 284/559 (50%), Gaps = 7/559 (1%)

Query: 44  ALLLEVCTSLKELRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A  L  C       +++P I    I  GL    +    L+ L+ K   +  A RVFE + 
Sbjct: 45  ACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELS 104

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            + +  +  ML GYA+    ++A+    +M    V P  Y  + +L  C       +G+ 
Sbjct: 105 ARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRS 164

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H Q    GF  + F    ++ +Y +CG    A ++F  MP RD V++NT+++G AQ   
Sbjct: 165 VHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAH 224

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
            E AL++   M   G   D +TI S+L A A++G L+ G  +H Y  +AG  S   +  +
Sbjct: 225 GEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGS 284

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+Y KCG VETA ++F+     NVV WN ++ A+ +  +  ++  +F +M   G+ P 
Sbjct: 285 LLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPN 344

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L  C   G+++ G  +H L  +    +D+ ++  LI MYSK   +++A  +  
Sbjct: 345 QFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L+ K +VSW +MI GY Q+    +AL  F +M+   I PD+  + S I   A +  +R 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQ 464

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IHA V  S +  +V +  AL+++YA+CG +  A + F+ +  +   TWN ++ G+  
Sbjct: 465 GLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQ 524

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVM 578
            GL + A+++F +M +   K N  TF+ A+SA ++   +++G   +   +K  +  E  +
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEV 584

Query: 579 DHYGAMVDLLGRAGRLNEA 597
            +  A++ L G+ G   +A
Sbjct: 585 GN--ALISLYGKCGSFEDA 601



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 1/308 (0%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKEL-RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSL 88
           Q A I    + +P  L    CT   +L  +I  L +K+G          L+ ++ KY  L
Sbjct: 337 QTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWL 396

Query: 89  SDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
             A RV E + +K    + +M+ GY +     DA++    M+   + P        +  C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             +  +R+G +IH ++ V+G+S D+     +VN+YA+CG+I EA+  F+ +  +D ++WN
Sbjct: 457 AGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            +V+GFAQ+G  E AL +  RM + G + +  T VS L A AN+  ++ GK +H   ++ 
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G      V  AL+ +Y KCG  E A++ F  M  RN VSWN++I +  + G   EA+  F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFF 636

Query: 329 QKMLDQGV 336
            +M  +G+
Sbjct: 637 DQMKKEGL 644


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/652 (37%), Positives = 378/652 (57%), Gaps = 16/652 (2%)

Query: 42  PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           P  LLL  CT++  LR+   ++  +GL       TKLVSL+  +    DA  VF+ IP+ 
Sbjct: 46  PCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105

Query: 102 LDALYHTMLKGYAKFASLDDAV---SFLIR--MRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
              L+  ML+ Y       + V     L++   RYDD+      ++  LK C ++ ++  
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV-----FSKALKACTELQDLDN 160

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           GK+IH QL V   S D   +TG+++MYAKCG+I+ A+K+F+ +  R++V W +++AG+ +
Sbjct: 161 GKKIHCQL-VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           N   E  L L  RM E    G+  T  +++ A   + +L  GK  HG  +++G +    +
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            T+L+DMY KCG +  AR VF+     ++V W +MI  Y   G+  EA+ +FQKM    +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAA 395
           +P  VTI   L  C  + +LE G  VH L   +K+G  D ++ N+L+ MY+KC +   A 
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNVANALVHMYAKCYQNRDAK 397

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F     K +V+WN++I G++QNG ++EAL  F +M S+++ P+  T+ S+  A A L 
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457

Query: 456 VIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
            +     +HA  ++  F    +V V TAL+D YAKCG   +AR +FD + E++  TW+ M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GYG  G    ++ELF +ML+   KPN+ TF   +SAC H+G+V EG  YF+S+ KDY 
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
             P   HY  MVD+L RAG L +A D I+KMPI+P +  FGA L  C +H   +LGE   
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
            ++ +L PD+  Y+VL++N+YA+   W++  +VR +M+++GL K  G S +E
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/681 (36%), Positives = 396/681 (58%), Gaps = 26/681 (3%)

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
            F+ I ++    ++ M+ GY +  +  + +  F + M    + P    +  +LK C  V 
Sbjct: 41  TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI 100

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
           +   G +IH   +  GF  D++    ++++Y++   +  A  +FD MP RD+ SWN +++
Sbjct: 101 D---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 157

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+ Q+G A+ AL L   +    R  D +T+VS+L A    G    G  +H Y+++ G +S
Sbjct: 158 GYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 213

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
                    ++   C +V      FD M  R+++SWNS+I AY     P  A+ +FQ+M 
Sbjct: 214 ---------ELLRDCQKV------FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 258

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKV 391
              ++P  +T++      + LGD+     V    L +     D+++ N+++ MY+K   V
Sbjct: 259 LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 318

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPA 450
           D A  +F+ L    ++SWN +I GYAQNG  +EA+  +  M  +  I  +  T VSV+PA
Sbjct: 319 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 378

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
            ++   +R    +H  ++++    +VFV+T+L DMY KCG +  A +LF  +   +   W
Sbjct: 379 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 438

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
           N +I  +G HG G+ AV LF +ML+   KP+ ITF+  +SACSHSGLV+EG   F  ++ 
Sbjct: 439 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 498

Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
           DYGI P + HYG MVD+ GRAG+L  A  FI+ M ++P  +++GA+L AC++H NV+LG+
Sbjct: 499 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 558

Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
            A+  LFE++P+  GYHVLL+N+YA+A  W+ + ++R+I   KGL+KTPG S +E+ N+V
Sbjct: 559 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 618

Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLA 749
             FY+G+  HP  + +Y  L  L  ++K  GYVPD   +  DVED  +E++L SHSE+LA
Sbjct: 619 EVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLA 678

Query: 750 IAFGLLNSSPGSTIHIRKNLR 770
           IAF L+ +   +TI I KNLR
Sbjct: 679 IAFALIATPAKTTIRIFKNLR 699


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/576 (39%), Positives = 343/576 (59%), Gaps = 23/576 (3%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFD 298
           ++S++P    +  L   K +  Y ++  + +  NV T  ++          +E A  +FD
Sbjct: 29  LISLIPKCTTLKEL---KQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFD 85

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +   N+V +N+M   Y    +P   +  F++                L   + +  L  
Sbjct: 86  QITQPNIVLFNTMARGYARLNDPLRMITHFRR---------------CLRLVSKVKALAE 130

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G  +H    +L +  ++ +  +LI+MY+ C  +D +  +F K+    +V++NA+I+  A+
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           N R NEAL  F +++   +KP   TM+ V+ + A L  +   +W+H  V +  F++ V V
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            T LIDMYAKCG++  A  +F  M +R    W+ +I  Y THG G  A+ + N+M +   
Sbjct: 251 NTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           +P++ITFL  + ACSH+GLVEEG  YF  +  +YGI P + HYG MVDLLGRAGRL+EA+
Sbjct: 311 QPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAY 370

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
            FI ++PI+P   ++  +L AC  H NVE+G++   R+FELD   GG +V+ +N+ A   
Sbjct: 371 KFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYG 430

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            WD +  +R  M  KG  K PGCS +E+ N VH F++G   H  S  ++  L+ L+ E+K
Sbjct: 431 KWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELK 490

Query: 719 AAGYVPDTNSIH--DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           +AGYVPDT+ +   D+ED  +E +L  HSEKLAI FGLLN+ PG+TI + KNLRVCGDCH
Sbjct: 491 SAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCH 550

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NA K+ISL+ GR+II+RD+ RFH FK+G CSCGDYW
Sbjct: 551 NAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 201/383 (52%), Gaps = 22/383 (5%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYN----SLSDAARVFEPIPDK 101
           L+  CT+LKEL++I    IK+   +     TK ++ FC  N    S+  A ++F+ I   
Sbjct: 32  LIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFIN-FCTSNPTKASMEHAHQLFDQITQP 90

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
              L++TM +GYA               R +D   ++ ++   L++   V  +  GK++H
Sbjct: 91  NIVLFNTMARGYA---------------RLNDPLRMITHFRRCLRLVSKVKALAEGKQLH 135

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
              +  G S +++ +  ++NMY  CG I+ + ++FD++ E  +V++N I+   A+N  A 
Sbjct: 136 CFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRAN 195

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            AL L   + E G +   +T++ +L + A +GSL +G+ +H Y  + GFD  V V+T L+
Sbjct: 196 EALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLI 255

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMYAKCG ++ A  VF  M  R+  +W+++I AY   G+  +A+ +  +M  + V+P  +
Sbjct: 256 DMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEI 315

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L+AC+  G +E G  + H + ++  +   +     ++ +  +  ++D A     +
Sbjct: 316 TFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDE 375

Query: 401 LQGK-TLVSWNAMILGYAQNGRV 422
           L  K T + W  ++   + +G V
Sbjct: 376 LPIKPTPILWRTLLSACSTHGNV 398



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 154/344 (44%), Gaps = 22/344 (6%)

Query: 12  FTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPS----ALLLEVCTSLKELRRILPLI---- 63
           F  S PT+   EH H L  +   P+ +  +      A L +    +   RR L L+    
Sbjct: 67  FCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVK 126

Query: 64  ------------IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
                       +K G+ D       L++++     +  + RVF+ I +     Y+ ++ 
Sbjct: 127 ALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIM 186

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
             A+    ++A++    ++   + P       +L  C  +G +  G+ +H  +   GF  
Sbjct: 187 SLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDR 246

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +   T +++MYAKCG +++A  +F  MP+RD  +W+ I+  +A +G    A+ ++  M 
Sbjct: 247 YVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMK 306

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           +E  + D IT + IL A ++ G +  G +  HG     G    +     +VD+  + GR+
Sbjct: 307 KEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRL 366

Query: 291 ETARLVFDGMKSRNV-VSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + A    D +  +   + W ++++A    GN E   R+ +++ +
Sbjct: 367 DEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFE 410


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/575 (40%), Positives = 350/575 (60%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D  T  +++ A   + S+R  K V  Y + +G D    +   ++ M+ KCG +  AR +F
Sbjct: 130 DSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLF 189

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  +N++SWN++I   V+ G+  EA R+F  M     +  +   +  + A A LG + 
Sbjct: 190 DEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIF 249

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H    +  +G DV +  +LI MYSKC  ++ A  +F ++  KT V WN++I GYA
Sbjct: 250 AGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            +G   EAL+ + +MR   +K D+FT   +I   A L+ + +AK  HA ++R  F  ++ 
Sbjct: 310 LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIV 369

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
             TAL+D+Y+K G +  A+ +FDMM  ++V +WN +I GYG HG G  AVE+F +ML   
Sbjct: 370 ANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG 429

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN +TFL  +SACS+SGL + G   F S+ +D+ I+P   HY  M++LLGR G L+EA
Sbjct: 430 MVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEA 489

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           +  I+  P +P + ++ A+L AC++HKN ELG+ AA +L+ + P++   +V+L NIY  +
Sbjct: 490 FALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXS 549

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
              ++ A V   ++++GL+  P CS +E+K + + F SG   H QSK IY  L+ L+ EI
Sbjct: 550 GRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEI 609

Query: 718 KAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
              GYVP    +    D  +E +L  HSEKLAIAFGL+N+S  + + I ++ R+CGDCH+
Sbjct: 610 SKHGYVPQXKFLLPDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHS 669

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           A K I+LVT REI+VRD  RFH FK+G CSCGDYW
Sbjct: 670 AIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 11/437 (2%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y  L+  C  +  IR  K++   +I +G   D +    V+ M+ KCG + +A ++FD M
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PE++++SWNTI+ G    G    A  L   M +          V+++ A A +G +  G+
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  +++ G    V V+ AL+DMY+KCG +E A+ VFD M  +  V WNS+IA Y   G
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EEA+ ++ +M D GV+  N T    +  CA L  LE     H  L +   G D+    
Sbjct: 313 YSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANT 372

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ +YSK  +++ A  +F  +  K ++SWNA+I GY  +GR  EA+  F +M  + + P
Sbjct: 373 ALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVP 432

Query: 440 DSFTMVSVIPALAELSVIRYAKW--IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +  T ++V+ A +  S +    W    ++      +        +I++  + G +  A A
Sbjct: 433 NHVTFLAVLSACS-YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491

Query: 498 LF-DMMNERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
           L  D   +  V  W  ++     H    LGK A E    M  GP K ++   L  I   +
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGM--GPEKLSNYVVLLNIY--N 547

Query: 554 HSGLVEEGIHYFTSLKK 570
            SG +EE      +LK+
Sbjct: 548 XSGRLEEAAAVIQTLKR 564



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 7/319 (2%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C  LK +R   ++   +I SGL      + +++ +  K   + DA R+F+ +P+K 
Sbjct: 137 LVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKN 196

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRM--RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
              ++T++ G        +A    + M   + D    ++    +++    +G I  G+++
Sbjct: 197 ILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMF--VTMIRASAGLGLIFAGRQL 254

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G   D+F    +++MY+KCG IE+A  +FD+MPE+  V WN+I+AG+A +G++
Sbjct: 255 HSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYS 314

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E AL +   M + G + D  T   I+   A + SL   K  H   +R GF   +  +TAL
Sbjct: 315 EEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTAL 374

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           VD+Y+K GR+E A+ VFD M  +NV+SWN++IA Y   G   EA+ +F++ML +G+ P +
Sbjct: 375 VDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNH 434

Query: 341 VTIMEALHACADLGDLERG 359
           VT +  L AC+  G  +RG
Sbjct: 435 VTFLAVLSACSYSGLSDRG 453



 Score = 47.0 bits (110), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 41/267 (15%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++++ +C    SL+  ++    +++ G     +  T LV L+ K+  + DA  VF+ +P 
Sbjct: 337 SIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPH 396

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    ++ ++ GY       +AV    RM ++ + P    +  +L  C   G   RG EI
Sbjct: 397 KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEI 456

Query: 161 HGQLIVNGFSLDLFAM--TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
             + +     +   AM    ++ +  + G ++EA+ +    P +  V           N 
Sbjct: 457 F-ESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTV-----------NM 504

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           +A  AL    R+H+    G F                    A   Y M  G + + N   
Sbjct: 505 WA--ALLTACRVHKNFELGKF-------------------AAEKLYGM--GPEKLSNY-V 540

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNV 305
            L+++Y   GR+E A  V   +K R +
Sbjct: 541 VLLNIYNXSGRLEEAAAVIQTLKRRGL 567


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/560 (39%), Positives = 348/560 (62%), Gaps = 2/560 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR  + VH + + +G     ++ T L+ +    G +  AR +F  + + +   ++S++  
Sbjct: 40  LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
             + G   + +  +++ML  G   +N T    + ACADL  L  G  +H  +     G+D
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + +  +LI++Y+K   +  A  +F  +  +T+++WN++I GY QNG   E++  F  M  
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
              +PDS T+VS++ + ++L  + +  W+H     + F+ NV + T+LI+MY +CG V  
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 279

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +FD M ER+V TW  MI GYG HG G+ A+ELF +M     +PN+ITF+  +SAC+H
Sbjct: 280 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 339

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK-MPIEPGITVF 613
           SGL+++G   F+S+K+ YG+ P ++H   MVD+ GRAG LN+A+ FI+K +P EPG  V+
Sbjct: 340 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 399

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            +MLGAC++H+N +LG K A  +  ++P+  G++V+L+NIYA A   D++  VR +M ++
Sbjct: 400 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 459

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            L+K  G S +E+  + + F  G   HPQ+  IY +L+ L+     +GYVP   S+ HD+
Sbjct: 460 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 519

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  ++  L  HSEKLA+AFGLL ++ G TI I KNLR+C DCH+A K+IS++  REIIV
Sbjct: 520 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 579

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+G CSC DYW
Sbjct: 580 RDKFRFHHFKDGSCSCLDYW 599



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 182/314 (57%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL     L+ L+++   II SGL       TKL+SL C   S++ A R+F  +P+    L
Sbjct: 33  LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 92

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + ++LK  +KF    D V F  RM +       Y +T ++K C D+  +R GKEIH  ++
Sbjct: 93  FDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVM 152

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V G+  D++    ++ +YAK   ++ A K+FD MP+R +++WN++++G+ QNG  + ++ 
Sbjct: 153 VCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIG 212

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M E G + D  TIVS+L + + +G+L  G  +H YA   GFD  V + T+L++MY 
Sbjct: 213 LFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYT 272

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           +CG V  AR VFD MK RNVV+W +MI+ Y   G   +AM +F +M   G  P N+T + 
Sbjct: 273 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVA 332

Query: 346 ALHACADLGDLERG 359
            L ACA  G ++ G
Sbjct: 333 VLSACAHSGLIDDG 346



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 206/407 (50%), Gaps = 12/407 (2%)

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +R  +++H  +IV+G       +T ++++    G I  A ++F  +P  D   +++++ 
Sbjct: 39  RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 98

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
             ++ GF+   +    RM   G      T  S++ A A++ +LR+GK +H + M  G+ S
Sbjct: 99  VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 158

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + V  AL+ +YAK   ++ A+ VFD M  R +++WNS+I+ Y + G P+E++ +F  M+
Sbjct: 159 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 218

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           + G +P + TI+  L +C+ LG L+ G ++H   D      +V +  SLI+MY++C  V 
Sbjct: 219 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           +A ++F  ++ + +V+W AMI GY  +G   +A+  F +MR+   +P++ T V+V+ A A
Sbjct: 279 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 338

Query: 453 ELSVIR-----YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNER 505
              +I      ++    A  +    E NV     ++DM+ + G +  A       +  E 
Sbjct: 339 HSGLIDDGRRVFSSMKEAYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEP 394

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
               W  M+     H      V++   +L   P  P     L  I A
Sbjct: 395 GPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYA 441



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 162/340 (47%), Gaps = 15/340 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++ C  L  LR    I   ++  G       Q  L++L+ K + +  A +VF+ +P + 
Sbjct: 131 VIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRT 190

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++++ GY +     +++     M      P       LL  C  +G +  G  +H 
Sbjct: 191 IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHD 250

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
               NGF L++   T ++NMY +CG + +A ++FD M ER++V+W  +++G+  +G+   
Sbjct: 251 YADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQ 310

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV--STAL 280
           A++L T M   G R + IT V++L A A+ G +  G+ V   +M+  +  +  V  +  +
Sbjct: 311 AMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SMKEAYGLVPGVEHNVCM 369

Query: 281 VDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           VDM+ + G +  A         K      W SM+ A     N +  +++ + +L   VEP
Sbjct: 370 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVL--SVEP 427

Query: 339 TN---VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            N     ++  ++A A  G ++R   V  ++ + +L   V
Sbjct: 428 ENPGHYVMLSNIYALA--GRMDRVEMVRNMMTRRRLKKQV 465


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/560 (39%), Positives = 348/560 (62%), Gaps = 2/560 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR  + VH + + +G     ++ T L+ +    G +  AR +F  + + +   ++S++  
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
             + G   + +  +++ML  G   +N T    + ACADL  L  G  +H  +     G+D
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 223

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           + +  +LI++Y+K   +  A  +F  +  +T+++WN++I GY QNG   E++  F  M  
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
              +PDS T+VS++ + ++L  + +  W+H     + F+ NV + T+LI+MY +CG V  
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 343

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           AR +FD M ER+V TW  MI GYG HG G+ A+ELF +M     +PN+ITF+  +SAC+H
Sbjct: 344 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 403

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK-MPIEPGITVF 613
           SGL+++G   F+S+K+ YG+ P ++H   MVD+ GRAG LN+A+ FI+K +P EPG  V+
Sbjct: 404 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 463

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
            +MLGAC++H+N +LG K A  +  ++P+  G++V+L+NIYA A   D++  VR +M ++
Sbjct: 464 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 523

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            L+K  G S +E+  + + F  G   HPQ+  IY +L+ L+     +GYVP   S+ HD+
Sbjct: 524 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 583

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+  ++  L  HSEKLA+AFGLL ++ G TI I KNLR+C DCH+A K+IS++  REIIV
Sbjct: 584 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 643

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FK+G CSC DYW
Sbjct: 644 RDKFRFHHFKDGSCSCLDYW 663



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 182/314 (57%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL     L+ L+++   II SGL       TKL+SL C   S++ A R+F  +P+    L
Sbjct: 97  LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 156

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + ++LK  +KF    D V F  RM +       Y +T ++K C D+  +R GKEIH  ++
Sbjct: 157 FDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVM 216

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           V G+  D++    ++ +YAK   ++ A K+FD MP+R +++WN++++G+ QNG  + ++ 
Sbjct: 217 VCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIG 276

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M E G + D  TIVS+L + + +G+L  G  +H YA   GFD  V + T+L++MY 
Sbjct: 277 LFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYT 336

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           +CG V  AR VFD MK RNVV+W +MI+ Y   G   +AM +F +M   G  P N+T + 
Sbjct: 337 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVA 396

Query: 346 ALHACADLGDLERG 359
            L ACA  G ++ G
Sbjct: 397 VLSACAHSGLIDDG 410



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 206/407 (50%), Gaps = 12/407 (2%)

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +R  +++H  +IV+G       +T ++++    G I  A ++F  +P  D   +++++ 
Sbjct: 103 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 162

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
             ++ GF+   +    RM   G      T  S++ A A++ +LR+GK +H + M  G+ S
Sbjct: 163 VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 222

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + V  AL+ +YAK   ++ A+ VFD M  R +++WNS+I+ Y + G P+E++ +F  M+
Sbjct: 223 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 282

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
           + G +P + TI+  L +C+ LG L+ G ++H   D      +V +  SLI+MY++C  V 
Sbjct: 283 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
           +A ++F  ++ + +V+W AMI GY  +G   +A+  F +MR+   +P++ T V+V+ A A
Sbjct: 343 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402

Query: 453 ELSVIR-----YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--MMNER 505
              +I      ++    A  +    E NV     ++DM+ + G +  A       +  E 
Sbjct: 403 HSGLIDDGRRVFSSMKEAYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEP 458

Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
               W  M+     H      V++   +L   P  P     L  I A
Sbjct: 459 GPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYA 505



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 162/340 (47%), Gaps = 15/340 (4%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +++ C  L  LR    I   ++  G       Q  L++L+ K + +  A +VF+ +P + 
Sbjct: 195 VIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRT 254

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +++++ GY +     +++     M      P       LL  C  +G +  G  +H 
Sbjct: 255 IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHD 314

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
               NGF L++   T ++NMY +CG + +A ++FD M ER++V+W  +++G+  +G+   
Sbjct: 315 YADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQ 374

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV--STAL 280
           A++L T M   G R + IT V++L A A+ G +  G+ V   +M+  +  +  V  +  +
Sbjct: 375 AMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SMKEAYGLVPGVEHNVCM 433

Query: 281 VDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           VDM+ + G +  A         K      W SM+ A     N +  +++ + +L   VEP
Sbjct: 434 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLS--VEP 491

Query: 339 TN---VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            N     ++  ++A A  G ++R   V  ++ + +L   V
Sbjct: 492 ENPGHYVMLSNIYALA--GRMDRVEMVRNMMTRRRLKKQV 529


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/701 (34%), Positives = 404/701 (57%), Gaps = 7/701 (0%)

Query: 34  IPS-RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           IP+ R  R   A LL++  S   +   + I   II SGL         L+++  K + + 
Sbjct: 42  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 101

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVC 148
           +A  VF+ +P K    + +M+  Y++    ++A+   + + R     P  +    +++ C
Sbjct: 102 NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 161

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             +G + +G ++HG ++ +GF  D++  T +++ Y+K G IEEA  +FD++ E+  V+W 
Sbjct: 162 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 221

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           TI+AG+ + G + ++L+L  +M E     D   + S+L A + +  L  GK +H Y +R 
Sbjct: 222 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G +  V+V   L+D Y KC RV+  R +FD M  +N++SW +MI+ Y++     EAM++F
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            +M   G +P        L +C     LE+G  VH    +  L +D  + N LI MY+K 
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             +  A  +F  +  + ++S+NAMI GY+   +++EAL  F +MR +  KP+ FT  ++I
Sbjct: 402 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
            A + L+ +R+ +  H  +++   +   FV  AL+DMYAKCG++  AR +F+    R V 
Sbjct: 462 TAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVV 521

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN MI  +  HG  + A+ +F +M++   +PN +TF+  +SACSH+G VE+G+++F S+
Sbjct: 522 CWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM 581

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
              +GI+P  +HY  +V LLGR+G+L EA +FI+KMPIEP   V+ ++L AC+I  NVEL
Sbjct: 582 -PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVEL 640

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G+ AA      DP + G ++LL+NI+A+  MW  + KVR  M+   + K PG S +E+ N
Sbjct: 641 GKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNN 700

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           +V+ F +  T H ++  I + L+ LI  IK AGYVPD  ++
Sbjct: 701 KVNVFIARDTTHREAD-IGSVLDILIQHIKGAGYVPDATAL 740



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 270/502 (53%), Gaps = 10/502 (1%)

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIR---MRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           L + Y T  K    F S   +  FL++   ++  ++ P    +  LL++      I   K
Sbjct: 11  LKSCYRTTKKQAFNF-STSVSPQFLLQNPCLQIPNLRPKRREFANLLQLSISRNPIIHYK 69

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IHGQ+IV+G   D F    ++N+ +K  +++ A  +FD+MP ++L++W+++V+ ++Q G
Sbjct: 70  IIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQG 129

Query: 219 FAELALDLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           ++E AL +   +  + G   +   + S++ A   +G +  G  +HG+ +R+GFD  V V 
Sbjct: 130 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 189

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T+L+D Y+K G +E ARLVFD +  +  V+W ++IA Y + G    ++ +F +M +  V 
Sbjct: 190 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 249

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAA 395
           P    +   L AC+ L  LE G  +H  +  L+ GT  DVS+ N LI  Y+KC +V    
Sbjct: 250 PDRYVVSSVLSACSMLEFLEGGKQIHAYV--LRRGTEMDVSVVNVLIDFYTKCNRVKAGR 307

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F ++  K ++SW  MI GY QN    EA+  F +M     KPD F   SV+ +     
Sbjct: 308 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSRE 367

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +   + +HA  I++  E + FV   LIDMYAK   +  A+ +FD+M E++V ++N MI+
Sbjct: 368 ALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIE 427

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GY +      A+ELF++M     KPN+ TF   I+A S+   +  G  +   L K  G++
Sbjct: 428 GYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVK-MGLD 486

Query: 576 PVMDHYGAMVDLLGRAGRLNEA 597
                  A+VD+  + G + EA
Sbjct: 487 FCPFVTNALVDMYAKCGSIEEA 508


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/681 (36%), Positives = 388/681 (56%), Gaps = 13/681 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LL+ CG    +  G+ IH +++  G   DLF    ++ MY KCG +EEA  +F+++ 
Sbjct: 3   FASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIE 62

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
             ++ SW+ I+     NG A  AL+L   M  EG R D + +++ + A +++GSL  G+A
Sbjct: 63  SPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRA 122

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGG 319
           +       GF     V  +L++MY K G ++ AR  F  M   ++VVSW +MI+ +   G
Sbjct: 123 LEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHG 182

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIME--ALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
             + A+  F+KM+ +GV P  VT +   AL AC++L  L  G  +H+L+  L  G D S+
Sbjct: 183 CEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELI--LDAGLDSSI 240

Query: 378 T-NSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
             NSL++MY KC  +D A  +F +    + L++W+ MI  Y+ NG   +AL+ + KM  +
Sbjct: 241 VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLE 300

Query: 436 NIKPDSFTMVSVIPALA-ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
            ++PD +T  S++ A +     +   + +H  +     EK + + TALI+MY + G +  
Sbjct: 301 GLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLED 360

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACS 553
           A  +F+ MN  ++  W  +I  +  HG    A++L  +M LEG  + ++I FL  + ACS
Sbjct: 361 ALRVFEKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLEG-VQADNIVFLSVLHACS 418

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H+ ++E G+  F  +  D+G+     HY  MVDLL R GR+ EA + +  MP EP     
Sbjct: 419 HAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEM 478

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
             +L AC++  +   G + A     L P +   +VL+++ YAA   WD++A+V+  M K 
Sbjct: 479 KTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKL 538

Query: 674 GLQKTPGCSLVELKNEVHSFYSGS-TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
           G++K  G S VE+KN VH F++G+ + H ++  I   L  L   +K  GY+PDT  I H 
Sbjct: 539 GVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTGQIGHR 598

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           +E+  +E+LL+ HSE++AIAFGLL    G  IH+ KNLRVC DCH   K IS   GR I+
Sbjct: 599 LEEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIV 658

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFH F+NG CSCGDYW
Sbjct: 659 VRDAYRFHRFENGTCSCGDYW 679



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 242/479 (50%), Gaps = 33/479 (6%)

Query: 44  ALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL+ C    SL E RRI   I+ +GL         L+ ++ K  ++ +A  VFE I  
Sbjct: 4   ASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIES 63

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                +  ++           A+     M ++ V   +      +  C  +G +  G+ +
Sbjct: 64  PNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRAL 123

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGF 219
             ++   GF L       ++NMY K G I+ A K F  M  ++ +VSW  +++GFA +G 
Sbjct: 124 EARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHGC 183

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILP--AVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
            +LALD   +M  EG R + +T VSIL   A +N+  L  GK +H   + AG DS + V 
Sbjct: 184 EDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI-VR 242

Query: 278 TALVDMYAKCGRVETARLVFDGM-KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            +L++MY KCG ++ AR VF+     RN+++W++MIAAY   G+  +A+ +++KM  +G+
Sbjct: 243 NSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGL 302

Query: 337 EPTNVTIMEALHACADLGD-LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
           EP   T    L AC+  GD L  G  +H+ L+   L   + +  +LI+MY +  +++ A 
Sbjct: 303 EPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDAL 362

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F K+    LV+W A+I  +AQ+G V+ A++   +M  + ++ D+   +SV+ A +   
Sbjct: 363 RVFEKMNHWNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNIVFLSVLHACS--- 418

Query: 456 VIRYAKWIHALVIR---SCFEKNVFVM---------TALIDMYAKCGAVGTARALFDMM 502
                   HA+V+    SCF++ V            + ++D+ A+CG V  A  L   M
Sbjct: 419 --------HAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSM 469



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 213/393 (54%), Gaps = 10/393 (2%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +   S+L       SL  G+ +H   +  G    + +   L+ MY KCG +E AR VF+ 
Sbjct: 1   VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEK 60

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           ++S N+ SW+ +I A V+ G    A+ ++  M  +GV    V ++  + AC+ LG L+ G
Sbjct: 61  IESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQ 418
             +   +  +       + NSL++MY K   +D A   F  + G +++VSW AMI G+A 
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFAL 180

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIP--ALAELSVIRYAKWIHALVIRSCFEKNV 476
           +G  + AL++F KM ++ ++P+  T VS++   A + L+++   K +H L++ +  + ++
Sbjct: 181 HGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI 240

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVMIDGYGTHGLGKAAVELFNKM-L 534
            V  +L++MY KCG +  AR +F+   + R++ TW+ MI  Y  +G G+ A+ L+ KM L
Sbjct: 241 -VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDL 299

Query: 535 EGPTKPNDITFLCAISACSHSG-LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
           EG  +P++ TF   + ACS +G  + EG      L+   G+E  M    A++++ GR G+
Sbjct: 300 EG-LEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAK-GLEKKMVLATALINMYGRYGQ 357

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           L +A    +KM     +  + A++ A   H NV
Sbjct: 358 LEDALRVFEKMN-HWNLVAWTALIAAFAQHGNV 389


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/562 (41%), Positives = 348/562 (61%), Gaps = 5/562 (0%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDM-YAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           L+  + +H   +  G     ++ T L+   YA    +   R +F  +   +   ++S+I 
Sbjct: 32  LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT 91

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
              +   P+E++  +++ML   +  +N T    + + ADL     G  +H  +     G 
Sbjct: 92  LTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGL 151

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D  +  +L+S Y+K   V  A  +F K+  KT+V+WN+MI GY QNG   EA+  F  M+
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
              +KPDS T VS++ A A++  I    W+H  + R+CF+ NV + TAL++MY++CG V 
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVS 271

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISAC 552
            AR +FD M E+++  W  MI GYG HG G  A+ELFN+M  +GP +PN++TF+  +SAC
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGP-RPNNVTFVAVLSAC 330

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM-PIEPGIT 611
           +H+GLV+EG   FT++K++YG+ P ++H   MVD+LGRAG LNEA+ FI+   P EP   
Sbjct: 331 AHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPA 390

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           V+ AMLGACK+HKN +LG + A  L  ++P+  G++V+L+NIYA A   D++ K+R IM 
Sbjct: 391 VWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMI 450

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
           +  L+K  G S +++ ++V+ F  G   HP++ +IY +L+ L+   + AGY+P + S+ H
Sbjct: 451 RNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMH 510

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           +VE+  +E  L  HSEKLAIAFGLL +  G  I I KNLR+C DCH A KYIS++  REI
Sbjct: 511 EVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREI 570

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
            VRD  RFH FK+G CSC DYW
Sbjct: 571 NVRDRLRFHHFKDGSCSCQDYW 592



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 226/439 (51%), Gaps = 11/439 (2%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSL-FCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           LK L++I   II +GL       TKL+S  +   + +S   R+F  IP     L+H+++ 
Sbjct: 32  LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT 91

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
             +KF+   +++    RM   +++   Y ++ ++K   D+     G+ IH  + + G+ L
Sbjct: 92  LTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGL 151

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D +    +V+ YAK G +  A K+FD+MPE+ +V+WN++++G+ QNGF + A++L   M 
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           + G + D  T VS+L A A VG++ +G  VH Y  R  FD  V + TAL++MY++CG V 
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVS 271

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR VFD M+ +N+V+W +MI+ Y   G+  +A+ +F +M   G  P NVT +  L ACA
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACA 331

Query: 352 DLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-- 408
             G ++ G  +   + Q   L   V     ++ M  +   ++ A         K      
Sbjct: 332 HAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAV 391

Query: 409 WNAMILGYAQNGRVN---EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           W AM+     +   +   E   +   +  +N  P  + M+S I ALA    +   + I  
Sbjct: 392 WTAMLGACKMHKNFDLGVEVAEHLLSIEPEN--PGHYVMLSNIYALA--GRMDRVEKIRN 447

Query: 466 LVIRSCFEKNVFVMTALID 484
           ++IR+  +K V   T  +D
Sbjct: 448 IMIRNRLKKEVGYSTIDVD 466


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/575 (40%), Positives = 350/575 (60%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D  T  +++ A   + S+R  K V  Y + +G D    +   ++ M+ KCG +  AR +F
Sbjct: 130 DSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLF 189

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D M  +N++SWN++I   V+ G+  EA R+F  M     +  +   +  + A A LG + 
Sbjct: 190 DEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIF 249

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
            G  +H    +  +G DV +  +LI MYSKC  ++ A  +F ++  KT V WN++I GYA
Sbjct: 250 AGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            +G   EAL+ + +MR   +K D+FT   +I   A L+ + +AK  HA ++R  F  ++ 
Sbjct: 310 LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIV 369

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
             TAL+D+Y+K G +  A+ +FDMM  ++V +WN +I GYG HG G  AVE+F +ML   
Sbjct: 370 ANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG 429

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN +TFL  +SACS+SGL + G   F S+ +D+ I+P   HY  M++LLGR G L+EA
Sbjct: 430 MVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEA 489

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           +  I+  P +P + ++ A+L AC++HKN ELG+ AA +L+ + P++   +V+L NIY  +
Sbjct: 490 FALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRS 549

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
              ++ A V   ++++GL+  P CS +E+K + + F SG   H QSK IY  L+ L+ EI
Sbjct: 550 GRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEI 609

Query: 718 KAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
              GYVP    +    D  +E +L  HSEKLAIAFGL+N+S  + + I ++ R+CGDCH+
Sbjct: 610 SKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHS 669

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           A K I+LVT REI+VRD  RFH FK+G CSCGDYW
Sbjct: 670 AIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 221/471 (46%), Gaps = 47/471 (9%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y  L+  C  +  IR  K++   +I +G   D +    V+ M+ KCG + +A ++FD M
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PE++++SWNTI+ G    G    A  L   M ++         V+++ A A +G +  G+
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  +++ G    V V+ AL+DMY+KCG +E A+ VFD M  +  V WNS+IA Y   G
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EEA+ ++ +M D GV+  N T    +  CA L  LE     H  L +   G D+    
Sbjct: 313 YSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANT 372

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ +YSK  +++ A  +F  +  K ++SWNA+I GY  +GR  EA+  F +M  + + P
Sbjct: 373 ALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVP 432

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T ++V      LS   Y+                             G       +F
Sbjct: 433 NHVTFLAV------LSACSYS-----------------------------GLSDRGWEIF 457

Query: 500 DMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           + M+  H        +  MI+  G  GL   A  L     + P KP    +   ++AC  
Sbjct: 458 ESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIK---DAPFKPTVNMWAALLTACRV 514

Query: 555 SGLVEEGIHYFTSLKKDYGIEP-VMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
               E G     + +K YG+ P  + +Y  ++++  R+GRL EA   IQ +
Sbjct: 515 HKNFELGKF---AAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTL 562



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 175/317 (55%), Gaps = 3/317 (0%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C  LK +R   ++   +I SGL      + +++ +  K   + DA R+F+ +P+K 
Sbjct: 137 LVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKN 196

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ G        +A    + M  D        +  +++    +G I  G+++H 
Sbjct: 197 ILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHS 256

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G   D+F    +++MY+KCG IE+A  +FD+MPE+  V WN+I+AG+A +G++E 
Sbjct: 257 CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEE 316

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL +   M + G + D  T   I+   A + SL   K  H   +R GF   +  +TALVD
Sbjct: 317 ALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVD 376

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           +Y+K GR+E A+ VFD M  +NV+SWN++IA Y   G   EA+ +F++ML +G+ P +VT
Sbjct: 377 LYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVT 436

Query: 343 IMEALHACADLGDLERG 359
            +  L AC+  G  +RG
Sbjct: 437 FLAVLSACSYSGLSDRG 453



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 41/267 (15%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++++ +C    SL+  ++    +++ G     +  T LV L+ K+  + DA  VF+ +P 
Sbjct: 337 SIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPH 396

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    ++ ++ GY       +AV    RM ++ + P    +  +L  C   G   RG EI
Sbjct: 397 KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEI 456

Query: 161 HGQLIVNGFSLDLFAM--TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
             + +     +   AM    ++ +  + G ++EA+ +    P +  V           N 
Sbjct: 457 F-ESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTV-----------NM 504

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
           +A  AL    R+H+    G F                    A   Y M  G + + N   
Sbjct: 505 WA--ALLTACRVHKNFELGKF-------------------AAEKLYGM--GPEKLSNY-V 540

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNV 305
            L+++Y + GR+E A  V   +K R +
Sbjct: 541 VLLNIYNRSGRLEEAAAVIQTLKRRGL 567


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/640 (37%), Positives = 359/640 (56%), Gaps = 69/640 (10%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-------------- 202
            + IH ++I   FS ++F    +V+ Y KCG  E+A K+FDRMP+R              
Sbjct: 38  ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97

Query: 203 -----------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
                            D  SWN +V+GFAQ+   E AL     MH E    +  +  S 
Sbjct: 98  FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A A +  L +G  +H    ++ +   V + +ALVDMY+KCG V  A+  FDGM  RN+
Sbjct: 158 LSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNI 217

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH-K 364
           VSWNS+I  Y + G   +A+ +F  M+D GVEP  +T+   + ACA    +  G+ +H +
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHAR 277

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVD-------------------------RAADI-- 397
           ++ + K   D+ + N+L+ MY+KC++V+                         RAA +  
Sbjct: 278 VVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKA 337

Query: 398 ----FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
               FS +  K +VSWNA+I GY QNG   EA+  F  ++ ++I P  +T  +++ A A 
Sbjct: 338 ARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397

Query: 454 LSVIRYAKWIHALVIRSCF------EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           L+ ++  +  H  +++  F      E ++FV  +LIDMY KCG V     +F+ M ER V
Sbjct: 398 LADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDV 457

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
            +WN MI GY  +G G  A+E+F KML    KP+ +T +  +SACSH+GLVEEG  YF S
Sbjct: 458 VSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHS 517

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           ++ + G+ P+ DH+  MVDLLGRAG L+EA D IQ MP++P   V+G++L ACK+H N+E
Sbjct: 518 MRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIE 577

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           LG+  A +L E+DP   G +VLL+N+YA    W  + +VR  M ++G+ K PGCS +E++
Sbjct: 578 LGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQ 637

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
           + VH F     +HP  K I+  L+ L +++K AGYVP+ +
Sbjct: 638 SRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEAD 677



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 266/564 (47%), Gaps = 77/564 (13%)

Query: 42  PSALLLEVCTSLK---ELRRILPLIIKSGLCDQHLFQTKLV------------------- 79
           P A LL+ C   K   + RRI   IIK+    +   Q +LV                   
Sbjct: 21  PFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRM 80

Query: 80  ------------SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLI 127
                       S+  K+  L +A  VF+ +P+     ++ M+ G+A+    ++A+ F +
Sbjct: 81  PQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFV 140

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
            M  +D     Y++   L  C  + ++  G +IH  +  + + LD++  + +V+MY+KCG
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCG 200

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILP 247
            +  A + FD M  R++VSWN+++  + QNG A  AL++   M + G   D IT+ S++ 
Sbjct: 201 VVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVS 260

Query: 248 AVANVGSLRIGKAVHGYAM-RAGFDSIVNVSTALVDMYAKCGRVETARLVFD-------- 298
           A A+  ++R G  +H   + R  + + + +  ALVDMYAKC RV  ARLVFD        
Sbjct: 261 ACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVV 320

Query: 299 -----------------------GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
                                   M  +NVVSWN++IA Y + G  EEA+R+F  +  + 
Sbjct: 321 SETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380

Query: 336 VEPTNVTIMEALHACADLGDLERG------IFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           + PT+ T    L+ACA+L DL+ G      I  H    Q    +D+ + NSLI MY KC 
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCG 440

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            V+    +F ++  + +VSWNAMI+GYAQNG    AL  F KM     KPD  TM+ V+ 
Sbjct: 441 MVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLS 500

Query: 450 ALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHV 507
           A +   ++    ++ H++             T ++D+  + G +  A  L   M  +   
Sbjct: 501 ACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDN 560

Query: 508 TTWNVMIDGYGTHG---LGKAAVE 528
             W  ++     HG   LGK   E
Sbjct: 561 VVWGSLLAACKVHGNIELGKYVAE 584



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 149/275 (54%), Gaps = 12/275 (4%)

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           +T +V  + +  S+  A  +F  + +K    ++ ++ GY +    ++AV   + ++ + +
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL------DLFAMTGVVNMYAKCGQ 188
            P  Y +  LL  C ++ +++ G++ H Q++ +GF        D+F    +++MY KCG 
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
           +E+   +F+RM ERD+VSWN ++ G+AQNG+   AL++  +M   G++ D +T++ +L A
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSA 501

Query: 249 VANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG--MKSRNV 305
            ++ G +  G+   H      G   + +  T +VD+  + G ++ A  +     M+  NV
Sbjct: 502 CSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNV 561

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V W S++AA    GN E    + +K+++  ++P N
Sbjct: 562 V-WGSLLAACKVHGNIELGKYVAEKLME--IDPLN 593


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/776 (32%), Positives = 417/776 (53%), Gaps = 13/776 (1%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L  C++ +    +   I+++        +  L++ +C+      A R+ + +P      +
Sbjct: 24  LRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSF 81

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + ++  Y++    + ++    R R    V    + Y   L  C   G +R GK +H   +
Sbjct: 82  NLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSV 141

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
           + G +  +F    +V+MYA+CG + +A ++FD   ERD VSWN +V+G+ + G  +  L 
Sbjct: 142 LEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLR 201

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +   M   G   +   + S++   A      + I  AVHG  ++AGFDS V +++A+V M
Sbjct: 202 VFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGM 261

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIA------AYVEGGNPEEAMRIFQKMLDQGVE 337
           YAK G +  A  +F  +   NVV +N+MIA      A V      EA+ ++ ++  +G+E
Sbjct: 262 YAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGME 321

Query: 338 PTNVTIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           PT  T    + AC   GD+E G  +H ++L     G D  + ++LI +Y     ++    
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF-IGSALIDLYLNSGCMEDGFR 380

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
            F+ +  + +V+W AMI G  QN     AL  F ++    +KPD FT+ SV+ A A L+V
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV 440

Query: 457 IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
            R  + I     +S F +   +  + I MYA+ G V  A   F  M    + +W+ +I  
Sbjct: 441 ARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISS 500

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           +  HG  + A+  FN+M++    PN+ITFL  ++ACSH GLV+EG+ Y+ ++K++Y + P
Sbjct: 501 HAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSP 560

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            + H   +VDLLGRAGRL +A  FI+         ++ ++L +C+IH+++E G+  A+R+
Sbjct: 561 TIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRI 620

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EL P     +V L NIY  A      +K+R +M+++G++K PG S +EL++ VHSF +G
Sbjct: 621 MELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAG 680

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLN 756
              HP+S  IY+ L  ++ +I        +++  D     +++ ++ HSEKLA+A GL++
Sbjct: 681 DKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIH 740

Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
               + I + KNLRVC DCH   K IS    REI++RD  RFH F++G CSC DYW
Sbjct: 741 LPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/534 (41%), Positives = 341/534 (63%), Gaps = 5/534 (0%)

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNV 341
           MYAKCG     R +FD M ++++V W +MI AY +   PEEA+ +F+KM  ++G+   ++
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            ++    A   LGD++    VH    +  L  ++ + NS+++M++KC   ++A  +F  +
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
             + ++SWN+M+ GY QNG+  EAL  F +MR  + +P   T + ++ A A L      +
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGT 519
             H  ++ S  E +  +  AL+DMYAKCG +  A  LF+ +   ER+  +WNV+I GYG 
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG GK A+ELF++M E   +PN  TF   +SACSH+GL++EG   F  +K+   +     
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKR-LSVTLEDK 299

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           H+  +VD+LGRAG L EA+D I++MP  P   V+GA+L ACKIH N+ELG+ AA+ L +L
Sbjct: 300 HHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQL 359

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +P+  GY+VL++NIYAA++ W ++ K+R  M+ KGL+K    S++E   ++  F++   +
Sbjct: 360 EPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQE 419

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           +P    +Y  +E+L  E+K AGYVPD + ++HDVE+  +E +L+ HSEKLA+AFG+L   
Sbjct: 420 NPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKID 479

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           PG  I + KNLRVC DCH+A KYIS +  R+IIVRD +RFH F+ G CSC DYW
Sbjct: 480 PGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 172/351 (49%), Gaps = 14/351 (3%)

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY------DDV 134
           ++ K     D  ++F+ +  K    +  M+  Y +    ++A+    +M+       D +
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           A V      +    G +G+++    +HG         +L     ++ M+ KCG  E+A  
Sbjct: 61  AVVS-----VASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARL 115

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +FD M ERD++SWN++++G+ QNG A  AL L   M +   +   +T + ++ A A +G 
Sbjct: 116 VFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGF 175

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMI 312
             +G+  H + + +  +   N+S AL+DMYAKCG +E A  +F+G+    RN  SWN +I
Sbjct: 176 RHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLI 235

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + Y   G+ +EA+ +F +M ++GVEP + T    L AC+  G ++ G      + +L + 
Sbjct: 236 SGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVT 295

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRV 422
            +      ++ M  +   +  A D+  ++        W A++L    +G +
Sbjct: 296 LEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNM 346



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 13/262 (4%)

Query: 74  FQTKLVSLFCKYNSL---------SDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           F+  L+   C  NS+         ++ AR VF+ + ++    +++ML GY +     +A+
Sbjct: 86  FRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEAL 145

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                MR  D  P       ++  C  +G    G++ H  ++ +   +D      +++MY
Sbjct: 146 LLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMY 205

Query: 184 AKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           AKCG +E+A  +F+ +P  ER+  SWN +++G+  +G  + AL+L +RM EEG   +  T
Sbjct: 206 AKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFT 265

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
             SIL A ++ G +  G+       R            +VDM  + G ++ A  +   M 
Sbjct: 266 FTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMP 325

Query: 302 SRNVVS-WNSMIAAYVEGGNPE 322
           S      W +++ A    GN E
Sbjct: 326 SPPSDGVWGALLLACKIHGNME 347


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/527 (41%), Positives = 339/527 (64%), Gaps = 8/527 (1%)

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHAC 350
           AR  FD +   N V   +M + YV       ++ +F+ M+  D          + A  A 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK--CKKVDRAADIFSKLQGKTLVS 408
           A + D      +H L+ ++    +  + N+++  Y+K   + ++ A  +F  ++ + +VS
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVS 121

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRS--KNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
           WN+MI  YAQNG   EA+  + KM +    IK ++  + +V+ A A    I+  K IH  
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           V+R   E+NV+V T+++DMY+KCG V  A   F  + E+++ +W+ MI GYG HG G+ A
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVD 586
           +E+F +M     +PN ITF+  ++ACSH+GL++EG +++ ++K+++GIE  ++HYG MVD
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301

Query: 587 LLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGY 646
           LLGRAG L+EA+  I++M ++P   ++GA+L AC+IHKNVEL E +  RLFELD    GY
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGY 361

Query: 647 HVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRI 706
           +VLL+NIYA A MW  + ++R +++ + ++K PG S  ELK +++ FY G   HPQ   I
Sbjct: 362 YVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEI 421

Query: 707 YTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHI 765
           Y++LE L++ ++ AGYVP+T S+ HD+++  +E+ L  HSEKLA+AF L+NS P S IHI
Sbjct: 422 YSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHI 481

Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KNLRVC DCH A K+I+ +T REII+RD+ RFH FK+G+CSC DYW
Sbjct: 482 IKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 171/332 (51%), Gaps = 9/332 (2%)

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
           DA R F+ IPD    +   M  GY +   +  ++     M   D A VV     L+    
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61

Query: 150 DVGEIRRG--KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--IEEAYKMFDRMPERDLV 205
                 RG    +H  +   GF  +   +  +++ YAK G   +E A K+FD M ERD+V
Sbjct: 62  SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHG 263
           SWN+++A +AQNG +  A+ L ++M   G   + + + + ++L A A+ G+++ GK +H 
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +R G +  V V T++VDMY+KCGRVE A   F  +K +N++SW++MI  Y   G  +E
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLI 382
           A+ IF +M   G+ P  +T +  L AC+  G L+ G + +  + Q   +   V     ++
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVS-WNAMI 413
            +  +   +D A  +  +++ K   + W A++
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 332



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 2/172 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +++ GL +     T +V ++ K   +  A+R F  I +K    +  M+ GY       +A
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVN 181
           +     M+   + P    +  +L  C   G +  G+  +  +    G    +     +V+
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301

Query: 182 MYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +  + G ++EAY +   M  + D   W  +++    +   ELA   V R+ E
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 353


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/683 (36%), Positives = 376/683 (55%), Gaps = 16/683 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+       +R G ++H  L+  GF  D      +++MYAKCG++  A ++FD MPER+
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++ GF  +G A   L L   M   G   +  T+ + L A    G  R G  +HG
Sbjct: 70  VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHG 127

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +R GF+    V+ +LV MY+K      AR VFD + SRN+ +WNSMI+ Y   G   +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187

Query: 324 AMRIFQKMLDQGVE-PTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDVSMTNS 380
           ++ +F++M  +  E P   T    L AC+ LG    G  VH  +    +   ++  +  +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ +Y KC ++  A  +F  L+ +  + W  +I+G+AQ G+V EA+  F +  S  ++ D
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
              + SV+   A+ +++   K +H    ++    +V V  +L+DMY KCG  G A   F 
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R+V +W  MI+G G HG G+ A++LF +M E   + +++ +L  +SACSHSGLV+E
Sbjct: 368 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDE 427

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
              YF+ + +D  + P  +HY  MVDLLGRAG L EA + I  MP+EP + V+  +L AC
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HK+V +G +  + L  +D D    +V+L+NI A A  W +   +R  M +KGL+K  G
Sbjct: 488 RVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGG 547

Query: 681 CSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETLIDEIKAA-GYVPDTN-SIHDVEDYVQ 737
           CS  E+  EVH FY G    HPQ+  I   L  +   ++   GY  D   ++HDV++  +
Sbjct: 548 CSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESR 607

Query: 738 ENLLSSHSEKLAIAFGLLN--------SSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
              L  HSE+LA+   LL            G  + + KNLRVCGDCH   K +S V  R 
Sbjct: 608 VESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRV 667

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           ++VRD +RFH F+NG CSC DYW
Sbjct: 668 VVVRDANRFHRFQNGACSCRDYW 690



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 226/480 (47%), Gaps = 17/480 (3%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+   ++   ++K G     +    L+ ++ K   L  A  VF+ +P++    +  ++
Sbjct: 18  SSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 77

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+       + +     MR    +P  +  +  LK CG  G  R G +IHG  +  GF 
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFE 135

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE---LALDLV 227
                   +V MY+K     +A ++FD +P R+L +WN++++G+A  G      L    +
Sbjct: 136 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 195

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYA 285
            R H+E  + D  T  S+L A + +G+ R G  VH      G     N  ++ AL+D+Y 
Sbjct: 196 QRRHDE--QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYV 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KC R+  A  VFDG++ RN + W ++I  + + G  +EAM +F++    GV      +  
Sbjct: 254 KCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSS 313

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            +   AD   +E+G  VH    +   G DVS+ NSL+ MY KC     A   F ++  + 
Sbjct: 314 VVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN 373

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW AMI G  ++G   EA++ F +M+ + ++ D    ++++ A +   ++   +   +
Sbjct: 374 VVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFS 433

Query: 466 LVIRSCFEKNVFV----MTALIDMYAKCGAVGTARAL-FDMMNERHVTTWNVMIDGYGTH 520
              R C ++ +         ++D+  + G +  A+ L   M  E  V  W  ++     H
Sbjct: 434 ---RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 205/409 (50%), Gaps = 17/409 (4%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  +L A A   SLR G  +H   M+ GF S   ++  L+DMYAKCG++  A  VFDGM 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            RNVVSW +++  ++  G   E +R+F +M   G  P   T+   L AC   G    G+ 
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 362 VHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           +H +  +    G DV + NSL+ MYSK +    A  +F  +  + L +WN+MI GYA  G
Sbjct: 125 IHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 421 RVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIH-ALVIRSCF-EKNVF 477
           +  ++L  F +M R  + +PD FT  S++ A + L   R    +H A+ +R      N  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           +  AL+D+Y KC  +  A  +FD +  R+   W  +I G+   G  K A+ LF +     
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 538 TKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
            + +       ++  +   LVE+G  +H +T+ K   G++  + +  ++VD+  + G   
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTA-KTPAGLDVSVAN--SLVDMYLKCGLTG 360

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           EA    ++MP    +  + AM+     H +   G +A + LFE   +EG
Sbjct: 361 EAGRRFREMPAR-NVVSWTAMINGVGKHGH---GREAID-LFEEMQEEG 404


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/681 (36%), Positives = 388/681 (56%), Gaps = 18/681 (2%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQ-- 71
           P+Q L + KH L+  A   S         LL+ CTS K +   ++I    I  GL     
Sbjct: 4   PSQALSKSKHLLTATARYQS---------LLQRCTSRKSIPNTKQIHAHTITLGLLSSPY 54

Query: 72  -HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
            H   + L + +  +     A ++F+ + +     ++ M++ Y       DA+   ++M 
Sbjct: 55  SHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQML 114

Query: 131 YDDVA-PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
                 P  Y Y +++K CGD      G  IH + +++GF  D F    ++ MY  CG++
Sbjct: 115 ASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEM 174

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           E A ++FD M ER LVSWNT++ G+ +NG  + AL +   M  +G   D  T+VS+LP  
Sbjct: 175 EVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVC 234

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + +  L +G+ VH           ++V  +L+DMYAKCG ++ A+++F  M  R+VVSW 
Sbjct: 235 SYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWT 294

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M+  Y+  G+   A+ + Q M  + V+P  VT+   L ACA L  L+ G  +H    + 
Sbjct: 295 TMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQ 354

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           KL ++V +  +LI MY+KC  V+ +  +FSK   +    WNA+I G   NG   +A+  F
Sbjct: 355 KLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELF 414

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M  + + P+  T+ S++PA A L+ ++ A+ +H  +IRS F   + V T LID+Y+KC
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474

Query: 490 GAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           G++ +A  +F+ +   ++ + TW+ +I GYG HG G+ A+ LF++M++   KPN+ITF  
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTS 534

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            + ACSH+GLV+EG+  F  + +D  +    DHY  ++DLLGRAGRL EA++ I+ M   
Sbjct: 535 ILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR 594

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   V+GA+LG+C IH+NVELGE AA  LFEL+P   G +VLLANIY+A   W     VR
Sbjct: 595 PNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVR 654

Query: 668 TIMEKKGLQKTPGCSLVELKN 688
            +M   GL+KTP  SL+E++N
Sbjct: 655 LMMNNIGLRKTPAHSLIEVRN 675


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/671 (36%), Positives = 383/671 (57%), Gaps = 14/671 (2%)

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           YLL      G I   + +  ++   G  ++L+ M  ++  YA  G++E+A K+F  MP +
Sbjct: 55  YLLSFHLRNGRIDEARSLFNKMSSPG--VNLYTM--MIGGYADEGRLEDALKLFYEMPVK 110

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           DL+SWN+++ G  + G   +A ++  +M E     + ++  +I+  +   G + + + + 
Sbjct: 111 DLISWNSMLKGCLKCGDLTMACNMFDKMSER----NVVSWTTIINGLLEFGRVEVAECL- 165

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
               R      V    ++V  +   GRVE A  +F+ M +RNV+SW S+I      G   
Sbjct: 166 ---FRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSF 222

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           EA+ +F KML    + T+ T+  AL ACA++     G+ +H L+ +     +  ++ SLI
Sbjct: 223 EALVVFHKML-ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLI 281

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           S Y+ CK +D A+ IF+    + +V W A++ GY  N R  +AL  F  M   ++ P+  
Sbjct: 282 SFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQS 341

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           ++ S + +   L  +   + +HA+  +   E ++FV  +L+ MY KCG +    A+F  M
Sbjct: 342 SLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRM 401

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           + ++V +WN +I G   HG G+ A+ LF +M+     P++IT    +SAC HSG++ +G 
Sbjct: 402 SRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGR 461

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
            +F    K++GIE   +HY +MVDLLGR G+L EA   I  MP +    V+ A+L +   
Sbjct: 462 CFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSIN 521

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
           H NV + E+AA  + +L P+    + LL+N+YA+   W +++K+R  M+ +G+ K PG S
Sbjct: 522 HSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSS 581

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLL 741
            + +K   H+F SG   HP S++IY  LE L  ++K  GYVPD   S HDVE   +E +L
Sbjct: 582 WITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEML 641

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
           S HSE+LAI FGL+++  GSTI + KNLR+CGDCHNA K  S V GREI+VRD  RFH F
Sbjct: 642 SYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHF 701

Query: 802 KNGVCSCGDYW 812
            NG CSCGDYW
Sbjct: 702 HNGTCSCGDYW 712



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 221/458 (48%), Gaps = 43/458 (9%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S   +   + +A  +F  +      LY  M+ GYA    L+DA+     M   D    
Sbjct: 56  LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKD---- 111

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQL----------IVNGF-----------------S 170
           + ++  +LK C   G++     +  ++          I+NG                  +
Sbjct: 112 LISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPT 171

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+ A   +V+ +   G++E+A ++F++MP R+++SW +++ G   NG +  AL +  +M
Sbjct: 172 KDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM 231

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
                +    T+   L A AN+ +  IG  +HG  ++ G+     +S +L+  YA C  +
Sbjct: 232 LAS-FKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLI 290

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + A  +F+   SRNVV W +++  Y       +A+++F+ M+   V P   ++  AL++C
Sbjct: 291 DNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSC 350

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
             L  ++RG  VH +  +L L +D+ ++NSL+ MY+KC  ++    +F+++  K +VSWN
Sbjct: 351 CGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWN 410

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           ++I+G AQ+G    AL  F +M    + PD  T+  ++ A     ++   +         
Sbjct: 411 SIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGR-----CFFK 465

Query: 471 CFEKNVFV------MTALIDMYAKCGAVGTARALFDMM 502
            F KN  +       ++++D+  + G +  A AL  +M
Sbjct: 466 HFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIM 503



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 202/447 (45%), Gaps = 49/447 (10%)

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
           S  L+  + + GR++ AR +F+ M S  V  +  MI  Y + G  E+A+++F +M  + +
Sbjct: 53  SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDL 112

Query: 337 EPTNVTIMEALHACADL-----------------------GDLERG-IFVHKLLDQLKLG 372
              N ++++    C DL                       G LE G + V + L ++   
Sbjct: 113 ISWN-SMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPT 171

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            DV+  NS++  +    +V+ A ++F K+  + ++SW ++I G   NGR  EAL  F KM
Sbjct: 172 KDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKM 231

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
            + + K  S T+   + A A +        IH L++++ +  N ++  +LI  YA C  +
Sbjct: 232 LA-SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLI 290

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A ++F+    R+V  W  ++ GYG +     A+++F  M+     PN  +   A+++C
Sbjct: 291 DNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSC 350

Query: 553 SHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
                V+ G  +H   ++    G+E  +    ++V +  + G +N+      +M     +
Sbjct: 351 CGLEAVDRGREVH---AVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNV 406

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFEL-----DPDEGGYHVLLANIYAAASMWDKLAK 665
             + +++  C  H     G  A     ++     DPDE    + LA + +A      L K
Sbjct: 407 VSWNSIIVGCAQHG---FGRWALTLFAQMIRTRVDPDE----ITLAGLLSACGHSGMLTK 459

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHS 692
            R   +  G  K  G   +E+ NE +S
Sbjct: 460 GRCFFKHFG--KNFG---IEMTNEHYS 481



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 3/287 (1%)

Query: 49  VCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
           +CT    ++ I  LI+K+G C        L+S +     + +A+ +F     +   ++  
Sbjct: 252 ICTPFIGVQ-IHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTA 310

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           +L GY       DA+     M    V P   + T  L  C  +  + RG+E+H      G
Sbjct: 311 LLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLG 370

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
              D+F    +V MY KCG I +   +F RM  +++VSWN+I+ G AQ+GF   AL L  
Sbjct: 371 LESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFA 430

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG-YAMRAGFDSIVNVSTALVDMYAKC 287
           +M       D IT+  +L A  + G L  G+     +    G +      +++VD+  + 
Sbjct: 431 QMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRY 490

Query: 288 GRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           G++E A  +   M  + N + W +++++ +   N   A R  + +LD
Sbjct: 491 GQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLD 537


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/728 (32%), Positives = 399/728 (54%), Gaps = 8/728 (1%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPS-----ALLLEVCTSLKEL---RRILPLIIK 65
           NS  +  LH   +  S   ++  R  + P      +++L+ C+ +++     ++  L I+
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQ 166

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
            G  +  +  + LV ++ K   L  A R+F  +P++    +  ++ GY +     + +  
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
              M    +      Y  + + C  +   + G ++HG  + + F+ D    T  ++MYAK
Sbjct: 227 FKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAK 286

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           C ++ +A+K+F+ +P     S+N I+ G+A+      AL++   +       D I++   
Sbjct: 287 CDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGA 346

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           L A + +     G  +HG A++ G    + V+  ++DMY KCG +  A  +FD M+ R+ 
Sbjct: 347 LTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDA 406

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN++IAA+ +     + + +F  ML   +EP + T    + ACA    L  G+ +H  
Sbjct: 407 VSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGR 466

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           + +  +G D  + ++L+ MY KC  +  A  I  +L+ KT VSWN++I G++   +   A
Sbjct: 467 IVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENA 526

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
             YF +M    + PD+FT  +V+   A ++ I   K IHA +++     +V++ + L+DM
Sbjct: 527 QRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDM 586

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y+KCG +  +R +F+   +R   TW+ MI  Y  HG G+ A++LF +M     KPN   F
Sbjct: 587 YSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIF 646

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  + AC+H G V++G+HYF  ++  YG++P M+HY  MVDLLGR+ ++NEA   I+ M 
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMH 706

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
            E    ++  +L  CK+  NVE+ EKA N L +LDP +   +VLLAN+YA   MW ++AK
Sbjct: 707 FEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAK 766

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R+IM+   L+K PGCS +E+++EVH+F  G   HP+S+ IY     L+DE+K AGYVPD
Sbjct: 767 IRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPD 826

Query: 726 TNSIHDVE 733
            +S+ D E
Sbjct: 827 IDSMLDEE 834



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 175/631 (27%), Positives = 314/631 (49%), Gaps = 48/631 (7%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C++LK L   ++    +I +           LV  +CK ++++ A +VF+ +P + 
Sbjct: 12  ILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRD 71

Query: 103 DALYHTMLKGYAKFASLD------------DAVSF-------------------LIRMRY 131
              ++TM+ GYA+  ++             D VS+                    +RMR 
Sbjct: 72  VISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRS 131

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             +      ++ +LK C  + +   G ++H   I  GF  D+   + +V+MY+KC +++ 
Sbjct: 132 LKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDG 191

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A+++F  MPER+LV W+ ++AG+ QN      L L   M + G      T  S+  + A 
Sbjct: 192 AFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251

Query: 252 VGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + + ++G  +HG+A+++ F  DSI+   TA +DMYAKC R+  A  VF+ + +    S+N
Sbjct: 252 LSAFKLGTQLHGHALKSDFAYDSII--GTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYN 309

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           ++I  Y       +A+ IFQ +    +    +++  AL AC+ +     GI +H L  + 
Sbjct: 310 AIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC 369

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            LG ++ + N+++ MY KC  +  A  IF  ++ +  VSWNA+I  + QN  + + L+ F
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
             M    ++PD FT  SV+ A A    + Y   IH  +++S    + FV +AL+DMY KC
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A  + D + E+   +WN +I G+ +    + A   F++MLE    P++ T+   +
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA--MVDLLGRAGRLNEAWDFIQKMPIE 607
             C++   +E G      + K   +    D Y A  +VD+  + G + ++    +K P  
Sbjct: 550 DVCANMATIELGKQIHAQILK---LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKR 606

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFE 638
             +T + AM+ A   H +   GE+A  +LFE
Sbjct: 607 DYVT-WSAMICAYAYHGH---GEQAI-KLFE 632



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 157/611 (25%), Positives = 284/611 (46%), Gaps = 83/611 (13%)

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
           + ++++L+ C ++  +  GK+ H Q+IV  F   ++    +V  Y K   +  A+K+FDR
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 199 MPERDLVSWNTIVAGFAQ-------------------------------NGFAELALDLV 227
           MP RD++SWNT++ G+A+                               NG    ++++ 
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
            RM       D+ T   +L A + +    +G  VH  A++ GF++ V   +ALVDMY+KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
            +++ A  +F  M  RN+V W+++IA YV+     E +++F+ ML  G+  +  T     
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            +CA L   + G  +H    +     D  +  + + MY+KC ++  A  +F+ L      
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR---YAKWIH 464
           S+NA+I+GYA+  +  +AL  F  ++   +   SF  +S+  AL   SVI+       +H
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYL---SFDEISLSGALTACSVIKGHLEGIQLH 363

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L ++     N+ V   ++DMY KCGA+  A  +FD M  R   +WN +I  +  +    
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL-KKDYGIEPVMDHYGA 583
             + LF  ML    +P+D T+   + AC+    +  G+     + K   G++  +    A
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--SA 481

Query: 584 MVDLLGRAGRLNEA--------------WDFI------QK--------------MPIEPG 609
           +VD+ G+ G L EA              W+ I      QK              M + P 
Sbjct: 482 LVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPD 541

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              +  +L  C     +ELG++   ++ +L+        L +++Y A+++ D  +K   +
Sbjct: 542 NFTYATVLDVCANMATIELGKQIHAQILKLN--------LHSDVYIASTLVDMYSKCGNM 593

Query: 670 MEKKGL-QKTP 679
            + + + +KTP
Sbjct: 594 QDSRLMFEKTP 604


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/562 (39%), Positives = 340/562 (60%), Gaps = 3/562 (0%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           ++R G+ VH + ++  +   V + T L+  Y KC  +  AR VFD M  RNVVSW +MI+
Sbjct: 73  AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY + G   +A+ +F +ML  G EP   T    L +C        G  +H  + +L    
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEA 192

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            V + +SL+ MY+K  K+  A  IF  L  + +VS  A+I GYAQ G   EAL  F +++
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQ 252

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + ++ +  T  SV+ AL+ L+ + + K +H  ++RS     V +  +LIDMY+KCG + 
Sbjct: 253 REGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLT 312

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISAC 552
            AR +FD ++ER V +WN M+ GY  HG G+  +ELFN M+ E   KP+ +T L  +S C
Sbjct: 313 YARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372

Query: 553 SHSGLVEEGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           SH GL ++G+  F  +      ++P   HYG +VD+LGRAGR+  A++F++KMP EP   
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAA 432

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           ++G +LGAC +H N+++GE   ++L +++P+  G +V+L+N+YA+A  W+ +  +R +M 
Sbjct: 433 IWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLML 492

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
           KK + K PG S +EL   +H+F++    HP+ + +   ++ L    K AGYVPD + + H
Sbjct: 493 KKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLH 552

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           DV++  +E +L SHSEKLA+ FGL+ +     I + KNLR+C DCHN  KY S + GRE+
Sbjct: 553 DVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREV 612

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
            +RD +RFH    G CSCGDYW
Sbjct: 613 SLRDKNRFHRIVGGKCSCGDYW 634



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 215/420 (51%), Gaps = 34/420 (8%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  +L  C     IR G+ +H  +I   +   ++  T ++  Y KC  + +A  +FD M
Sbjct: 60  DYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVM 119

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PER++VSW  +++ ++Q G+A  AL L  +M   G   +  T  ++L +        +G+
Sbjct: 120 PERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGR 179

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H + ++  +++ V V ++L+DMYAK G++  AR +F  +  R+VVS  ++I+ Y + G
Sbjct: 180 QIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLG 239

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EEA+ +F+++  +G++   VT    L A + L  L+ G  VH  L + ++ + V + N
Sbjct: 240 LDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQN 299

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN-IK 438
           SLI MYSKC  +  A  IF  L  +T++SWNAM++GY+++G   E L  F  M  +N +K
Sbjct: 300 SLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVK 359

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           PDS T+++V+   +   +                      M    DM        T+  +
Sbjct: 360 PDSVTVLAVLSGCSHGGLEDKG------------------MDIFYDM--------TSGKI 393

Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-HSGL 557
               + +H   +  ++D  G  G  +AA E   KM   P +P+   + C + ACS HS L
Sbjct: 394 SVQPDSKH---YGCVVDMLGRAGRVEAAFEFVKKM---PFEPSAAIWGCLLGACSVHSNL 447



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 192/353 (54%), Gaps = 3/353 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +++E +R+   +IK+        +T+L+  + K +SL DA  VF+ +P++    +  M+ 
Sbjct: 73  AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y++      A+S  ++M      P  + +  +L  C        G++IH  +I   +  
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEA 192

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            ++  + +++MYAK G+I EA  +F  +PERD+VS   I++G+AQ G  E AL+L  R+ 
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQ 252

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG + +++T  S+L A++ + +L  GK VH + +R+   S V +  +L+DMY+KCG + 
Sbjct: 253 REGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLT 312

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHAC 350
            AR +FD +  R V+SWN+M+  Y + G   E + +F  M+D+  V+P +VT++  L  C
Sbjct: 313 YARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372

Query: 351 ADLGDLERG--IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +  G  ++G  IF      ++ +  D      ++ M  +  +V+ A +   K+
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 10/322 (3%)

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
           E  + +  + LD   +  N  + E L   A    +  G  VH  + +      V +   L
Sbjct: 44  EALLHMALRGLDTNFQDYNTVLNECLRKRA----IREGQRVHAHMIKTHYLPCVYLRTRL 99

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           I  Y KC  +  A  +F  +  + +VSW AMI  Y+Q G  ++AL+ F +M     +P+ 
Sbjct: 100 IVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNE 159

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
           FT  +V+ +    S     + IH+ +I+  +E +V+V ++L+DMYAK G +  AR +F  
Sbjct: 160 FTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQC 219

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           + ER V +   +I GY   GL + A+ELF ++     + N +T+   ++A S    ++ G
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHG 279

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
                 L +   +   +    +++D+  + G L  A      +     I+    ++G  K
Sbjct: 280 KQVHNHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK 338

Query: 622 IHKNVELGEKAANRLFELDPDE 643
             +  E+ E     LF L  DE
Sbjct: 339 HGEGREVLE-----LFNLMIDE 355


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 347/594 (58%), Gaps = 75/594 (12%)

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L+   RMH  G  GD  T+  +L + A++  + +G+ VHG  +R G +          D 
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG---------DF 142

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y                         S+I  YV+ G   +A ++F KM+ +         
Sbjct: 143 YVGA----------------------SLIDMYVKCGVIGDARKLFDKMIVR--------- 171

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
                                         D++  N+LI+ Y K  ++  A D+F +++ 
Sbjct: 172 ------------------------------DMASWNALIAGYMKEGEIGVAEDLFERMEH 201

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPALAELSVIRYAK 461
           + +VSW AMI GY QNG   +AL  F +M      +KP+  T+VSV+PA A+ + +   +
Sbjct: 202 RNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 261

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGT 519
            IH          N  V TAL  MYAKC ++  AR  FDM+  N +++  WN MI  Y +
Sbjct: 262 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 321

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG G  AV +F  ML    +P+ +TF+  +S CSHSGL++ G+++F  +   + +EP ++
Sbjct: 322 HGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVE 381

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  +VDLLGRAGRL EA + I +MP++ G +V+GA+L AC+ H+N+E+ E AA RLF L
Sbjct: 382 HYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVL 441

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +PD  G +VLL+N+YA A MW+++ K+R +++ +G++K+PGCS +E+  + H F      
Sbjct: 442 EPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKS 501

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQ+K IY FLE L ++IK AGY+PDT+ + HD+ +  +E  L++HSEKLAIAFGLLN+ 
Sbjct: 502 HPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTR 561

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           PG  + + KNLR+CGDCH ATK+IS +  REIIVRD++RFHCFK+G CSCGDYW
Sbjct: 562 PGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 137/268 (51%), Gaps = 35/268 (13%)

Query: 128 RMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG 187
           RM +  +    +   ++LK C D+  +  G+ +HGQ +  G   D +    +++MY KCG
Sbjct: 97  RMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCG 156

Query: 188 QIEEAYKMFDRMPERDLVSWNTIVAGF-------------------------------AQ 216
            I +A K+FD+M  RD+ SWN ++AG+                                Q
Sbjct: 157 VIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQ 216

Query: 217 NGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           NGFAE AL L   M ++G   + +++TIVS+LPA A   +L  G+ +H +A   G     
Sbjct: 217 NGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNS 276

Query: 275 NVSTALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
           +V TAL  MYAKC  +  AR  FD      +N+++WN+MI AY   G   EA+ IF+ ML
Sbjct: 277 SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENML 336

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGI 360
             GV+P  VT M  L  C+  G ++ G+
Sbjct: 337 RAGVQPDAVTFMGLLSGCSHSGLIDAGL 364



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 6/201 (2%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHT 108
            +L+  RRI       GL      QT L  ++ K  SL +A   F+ I      L  ++T
Sbjct: 255 AALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNT 314

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVN 167
           M+  YA      +AVS    M    V P    +  LL  C   G I  G    +    ++
Sbjct: 315 MITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH 374

Query: 168 GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAGFAQNGFAELALDL 226
                +     VV++  + G++ EA ++  +MP +   S W  ++A    +   E+A   
Sbjct: 375 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELA 434

Query: 227 VTRMH--EEGRRGDFITIVSI 245
             R+   E    G+++ + ++
Sbjct: 435 ARRLFVLEPDNSGNYVLLSNL 455


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/643 (37%), Positives = 376/643 (58%), Gaps = 18/643 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++ +  G+V+ Y K   I EA  +F+ MPER++VSW  +V G+ Q G    A  L  RM 
Sbjct: 78  NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E       ++   +   + + G  RI KA   Y M    D  V  ST ++    + GRV+
Sbjct: 138 ERNE----VSWTVMFGGLIDDG--RIDKARKLYDMMPVKD--VVASTNMIGGLCREGRVD 189

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            ARL+FD M+ RNVV+W +MI  Y +    + A ++F+ M     E T V+    L    
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGYT 245

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
             G +E      +  + + +   V   N++I  + +  ++ +A  +F  ++ +   +W  
Sbjct: 246 LSGRIEDA---EEFFEVMPM-KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  Y + G   EAL+ F +M+ + ++P   +++S++   A L+ ++Y + +HA ++R  
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +V+V + L+ MY KCG +  A+ +FD  + + +  WN +I GY +HGLG+ A+++F+
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M    T PN +T +  ++ACS++G +EEG+  F S++  + + P ++HY   VD+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G++++A + I+ M I+P  TV+GA+LGACK H  ++L E AA +LFE +PD  G +VLL+
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFL 710
           +I A+ S W  +A VR  M    + K PGCS +E+  +VH F  G  K HP+   I   L
Sbjct: 542 SINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601

Query: 711 ETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E     ++ AGY PD ++ +HDV++  + + LS HSE+LA+A+GLL    G  I + KNL
Sbjct: 602 EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNL 661

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVCGDCH A K IS VT REII+RD +RFH F NG CSC DYW
Sbjct: 662 RVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 226/477 (47%), Gaps = 19/477 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS + K   + +A  VFE +P++    +  M+KGY +   + +A S   RM   +    
Sbjct: 85  LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-- 142

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +     D G I + ++++  + V     D+ A T ++    + G+++EA  +FD
Sbjct: 143 --SWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFD 196

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ER++V+W T++ G+ QN   ++A  L   M E+      ++  S+L      G  RI
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSG--RI 250

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
             A   + +      I     A++  + + G +  AR VFD M+ R+  +W  MI AY  
Sbjct: 251 EDAEEFFEVMPMKPVI--ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F +M  QGV P+  +++  L  CA L  L+ G  VH  L + +   DV +
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + L++MY KC ++ +A  +F +   K ++ WN++I GYA +G   EAL  F +M S   
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            P+  T+++++ A +    +     I  ++  + C    V   +  +DM  + G V  A 
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG-PTKPNDITFLCAISA 551
            L + M  +   T W  ++    TH     A     K+ E  P        L +I+A
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 41/352 (11%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ + + N +  A ++FE +P+K +  + +ML GY     ++DA  F   M    + 
Sbjct: 207 TTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMK 263

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           PV+                                    A   ++  + + G+I +A ++
Sbjct: 264 PVI------------------------------------ACNAMIVGFGEVGEISKARRV 287

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FD M +RD  +W  ++  + + GF   ALDL  +M ++G R  F +++SIL   A + SL
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           + G+ VH + +R  FD  V V++ L+ MY KCG +  A+LVFD   S++++ WNS+I+ Y
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTD 374
              G  EEA++IF +M   G  P  VT++  L AC+  G LE G+ + + ++ +  +   
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEA 425
           V   +  + M  +  +VD+A ++   +  K   + W A++     + R++ A
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 56/313 (17%)

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           ++ G++  AR  FD ++ + + SWNS+++ Y   G P+EA ++F +M ++          
Sbjct: 28  SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER---------- 77

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
                                        +V   N L+S Y K + +  A ++F  +  +
Sbjct: 78  -----------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPER 108

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +VSW AM+ GY Q G V EA + F +M  +N      +   +   L +   I  A+ ++
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKLY 164

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            ++      K+V   T +I    + G V  AR +FD M ER+V TW  MI GY  +    
Sbjct: 165 DMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A +LF  M E      ++++   +   + SG +E+   +F  +     ++PV+    AM
Sbjct: 221 VARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVI-ACNAM 271

Query: 585 VDLLGRAGRLNEA 597
           +   G  G +++A
Sbjct: 272 IVGFGEVGEISKA 284



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 141/329 (42%), Gaps = 46/329 (13%)

Query: 256 RIGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           RIGK       R  FDS+    +    ++V  Y   G  + AR +FD M  RNVVSWN +
Sbjct: 29  RIGKINEA---RKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGV---------------------------EPTNVTIM 344
           ++ Y++     EA  +F+ M ++ V                           E   V+  
Sbjct: 86  VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWT 145

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
                  D G +++     KL D + +  DV  + ++I    +  +VD A  IF +++ +
Sbjct: 146 VMFGGLIDDGRIDKA---RKLYDMMPV-KDVVASTNMIGGLCREGRVDEARLIFDEMRER 201

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
            +V+W  MI GY QN RV+ A   F  M  K       +  S++        I  A+   
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFF 257

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            ++      K V    A+I  + + G +  AR +FD+M +R   TW  MI  Y   G   
Sbjct: 258 EVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACS 553
            A++LF +M +   +P+  + +  +S C+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCA 342



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 51/266 (19%), Positives = 113/266 (42%), Gaps = 28/266 (10%)

Query: 42  PSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           PS + +L VC +L  L   R++   +++    D     + L++++ K   L  A  VF+ 
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
              K   ++++++ GYA     ++A+     M      P       +L  C   G++  G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451

Query: 158 KEIHGQLIVNGF----SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
            EI  + + + F    +++ ++ T  V+M  + GQ+++A ++ + M  + D   W  ++ 
Sbjct: 452 LEIF-ESMESKFCVTPTVEHYSCT--VDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508

Query: 213 GFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
               +   +LA     ++  +E    G ++ + SI  + +  G + + +           
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK---------- 558

Query: 271 DSIVNVSTALVDMYAKCGRVETARLV 296
               N+ T  V  +  C  +E  + V
Sbjct: 559 ----NMRTNNVSKFPGCSWIEVGKKV 580


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 384/731 (52%), Gaps = 72/731 (9%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCG------QIEEAYKMFDRMPERDLVSW 207
           +R+  E+H  L+ +G  L   + + ++N    C        +  A  +FDRMP    +  
Sbjct: 12  VRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFD 71

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN-VGSLRIGKAVHGYAM 266
             + A F  +   E  L L  RM   G   D  T   +    A     + + + +H    
Sbjct: 72  TALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACF 131

Query: 267 RAGFDSIVN-VSTALVDMYAKCGRVETARLVFDGMK------------------------ 301
           R    S V  VS  ++ MY + G    AR  FD +                         
Sbjct: 132 RTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAW 191

Query: 302 -------SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
                  +RNV+SW  +I+ Y   G   EA+  F  ML  G+EP  VT++  L ACA L 
Sbjct: 192 CLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLK 251

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAM- 412
           DL  G  +HKL+ +  +     +  +LI MY+KC  + RA ++F  L +G+   SWNAM 
Sbjct: 252 DLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMI 311

Query: 413 ------------------------------ILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
                                         I GY   GR+ EAL  F +MR  +++ D+F
Sbjct: 312 DGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNF 371

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           TMVS++ A A L  +   + +HA + +   E ++++ TAL+DMY KCG V  A  +F  M
Sbjct: 372 TMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAM 431

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
           + R V TW+ MI G   +G+GKAA+E F  M     +PN +T++  ++ACSHS L++EG 
Sbjct: 432 SVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGR 491

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKI 622
            YF  ++  + I P+++HYG M+DLLGR+G L+EA D ++ MP++P   ++ ++L AC++
Sbjct: 492 LYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRV 551

Query: 623 HKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
           HK+  L   AA  L +L+PDE   +V L NIY  +  W+  +++R +ME++G++K  G S
Sbjct: 552 HKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYS 611

Query: 683 LVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLL 741
            + +  +VH F      HPQ   I   +E +   +K+ GY P T+ I  DV++  +E+ L
Sbjct: 612 SITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHAL 671

Query: 742 SSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF 801
            +HSEK+AIAFGL++ +P   +HI KNLRVC DCH+A K IS +  REIIVRD  RFH F
Sbjct: 672 LAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHF 731

Query: 802 KNGVCSCGDYW 812
           ++G CSC D+W
Sbjct: 732 RDGTCSCNDFW 742



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 218/519 (42%), Gaps = 109/519 (21%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIR-MRYDDVAPVVYNYTYLLKVCG-DVGEIRRGKEIHG 162
           L+ T L+   + +S  ++   L R MR   V    + + +L K C      +   + +H 
Sbjct: 69  LFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHA 128

Query: 163 QLIVNGF-SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF-- 219
                   S        +++MY + G   +A + FD +P +D V+W T+++G A+ G   
Sbjct: 129 ACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLD 188

Query: 220 -----------------------------AELALDLVTRMHEEGRRGDFITIVSILPAVA 250
                                        A  A+D    M  +G   D +T++ +L A A
Sbjct: 189 DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACA 248

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC----------------------- 287
            +  L  G+++H      G      +  AL+DMYAKC                       
Sbjct: 249 QLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWN 308

Query: 288 ---------GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
                    G V+ AR +FD M+ R++V++NS+I  Y+ GG   EA+ +F +M    +  
Sbjct: 309 AMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRA 368

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            N T++  L ACA LG L +G  +H  ++Q  +  D+ +  +L+ MY KC +V+ A+ +F
Sbjct: 369 DNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVF 428

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             +  + + +W+AMI G A NG    AL YF  M+    +P+S T ++++ A +      
Sbjct: 429 QAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSH----- 483

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVM 513
                      SC          L+D           R  F+ M   H     +  +  M
Sbjct: 484 -----------SC----------LLD---------EGRLYFEEMRLLHNIRPLIEHYGCM 513

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
           ID  G  GL   A++L   M   P +PN + +   +SAC
Sbjct: 514 IDLLGRSGLLDEAMDLVRTM---PMQPNAVIWASILSAC 549



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 63/350 (18%)

Query: 73  LFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR---- 128
           L    ++ ++ +     DA R F+ IP K    + T++ G AK   LDDA   L      
Sbjct: 141 LVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPAR 200

Query: 129 ---------------------------MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
                                      M  D + P       LL  C  + ++  G+ +H
Sbjct: 201 NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLH 260

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK--------------------------- 194
             +   G  +    +  +++MYAKCG I  A++                           
Sbjct: 261 KLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHV 320

Query: 195 -----MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
                +FD+M +RDLV++N+++ G+   G    AL L  +M     R D  T+VS+L A 
Sbjct: 321 DVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTAC 380

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           A++G+L  G+A+H    +   +  + + TAL+DMY KCGRVE A LVF  M  R+V +W+
Sbjct: 381 ASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWS 440

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +MIA     G  + A+  F  M   G +P +VT +  L AC+    L+ G
Sbjct: 441 AMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEG 490


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/608 (40%), Positives = 358/608 (58%), Gaps = 10/608 (1%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           +N+++   + +     AL L   M + G + D +T   ++ A         G  VH + +
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           ++GF+    + ++L+ +YA    +  A+ +F+   +R+VVSWN+MI  YV+      A  
Sbjct: 223 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 282

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F +M+ + V   N  I    +  A +G ++      +L D++     VS  NS+++ + 
Sbjct: 283 VFDRMVCRDVISWNTMI----NGYAIVGKIDEA---KRLFDEMPERNLVSW-NSMLAGFV 334

Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
           KC  V+ A  +FS++  + +VSWN+M+  YAQ G+ NEAL  F +MR+  +KP   T+VS
Sbjct: 335 KCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 394

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           ++ A A L  +     +H  +  +  E N  V TAL+DMYAKCG +  A  +F+ M  + 
Sbjct: 395 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 454

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           V  WN +I G   HG  K A +LF +M E   +PNDITF+  +SACSH+G+V+EG     
Sbjct: 455 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 514

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
            +   YGIEP ++HYG ++DLL RAG L EA + I  MP+EP  +  GA+LG C+IH N 
Sbjct: 515 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 574

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           ELGE    RL  L P   G ++LL+NIYAAA  WD   KVR +M+  G+ K PG S++EL
Sbjct: 575 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 634

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA-GYVPDT-NSIHDVEDYVQENLLSSH 744
           K  VH F +G   HP+S +IY  L  +   +K+A GY  DT N + D+E+  +E+ L+ H
Sbjct: 635 KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVH 694

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SEKLAIA+GLL+      I I KNLRVC DCH+  K IS V GREIIVRD +RFH F++G
Sbjct: 695 SEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDG 754

Query: 805 VCSCGDYW 812
            CSC D+W
Sbjct: 755 ECSCLDFW 762



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 224/444 (50%), Gaps = 26/444 (5%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           L+ A  +F  + +   +LY+++++  +   +  +A+     M    + P    Y +++K 
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C +      G  +H  ++ +GF  D + ++ ++++YA    +  A ++F+    RD+VSW
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264

Query: 208 NTIVAGFAQN---GFAELALD-LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           N ++ G+ ++   G A +  D +V R        D I+  +++   A VG +   K +  
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCR--------DVISWNTMINGYAIVGKIDEAKRL-- 314

Query: 264 YAMRAGFDSIVNVS----TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
                 FD +   +     +++  + KCG VE A  +F  M  R+VVSWNSM+A Y + G
Sbjct: 315 ------FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCG 368

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
            P EA+ +F +M   GV+PT  T++  L ACA LG L++G+ +H  ++  ++  +  +  
Sbjct: 369 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 428

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+ MY+KC K+  A  +F+ ++ K +++WN +I G A +G V EA   F +M+   ++P
Sbjct: 429 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP 488

Query: 440 DSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
           +  T V+++ A +   ++    K +  +      E  V     +ID+ A+ G +  A  L
Sbjct: 489 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL 548

Query: 499 FDMMN-ERHVTTWNVMIDGYGTHG 521
              M  E + +    ++ G   HG
Sbjct: 549 IGTMPMEPNPSALGALLGGCRIHG 572



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 57/369 (15%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ F K  ++ DA  +F  +P +    +++ML  YA+    ++A++   +MR   V P 
Sbjct: 329 MLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 388

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 LL  C  +G + +G  +H  +  N   ++    T +V+MYAKCG+I  A ++F+
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  +D+++WNTI+AG A +G  + A  L   M E G   + IT V+IL A ++ G +  
Sbjct: 449 AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDE 508

Query: 258 G-KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           G K +   +   G +  V     ++D+ A+ G +                          
Sbjct: 509 GQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFL-------------------------- 542

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL---GT 373
                EEAM +   M    +EP    +   L  C   G+ E G  V K L  L+    G 
Sbjct: 543 -----EEAMELIGTM---PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGR 594

Query: 374 DVSMTNSLISMYSKCKKVDRAADI--------FSKLQGKTLVSWNAMI-------LGYAQ 418
            + ++N    +Y+  KK D A  +         SK+ G +++    M+         + +
Sbjct: 595 YILLSN----IYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPE 650

Query: 419 NGRVNEALN 427
           + ++ E LN
Sbjct: 651 SNKIYEKLN 659


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/692 (34%), Positives = 391/692 (56%), Gaps = 43/692 (6%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           +E+H ++I  G   D +    +V +Y K G ++ A+  FDR+  +++ SW  +++ FAQN
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G    AL L  +M  EG + + +T+ ++L   +++  L  G+++HG  + A  D ++   
Sbjct: 114 GHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKKDVVIG-- 171

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            ALV+MY+KCG +  AR  F  M  R+VVSW +MI A  E G   EA+ IF +M+ + V 
Sbjct: 172 NALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVA 231

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQ--LKLGTDVSMTNSLISMYSKCKKVDRAA 395
           P  ++ +  L AC++LGD  +   +H+ +    L+L   + + N+LI  Y +C     A 
Sbjct: 232 PNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDAR 291

Query: 396 DIFSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIKPDSFTMVSVIPAL 451
            +F  LQ   +  VSW +MI  Y  N +    +  + +M  R ++ K D    + V+ A 
Sbjct: 292 RVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEAC 351

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           + LS ++  + +H  ++ + F   + +  A+++MY KCG++  AR +FD M  R++  WN
Sbjct: 352 SSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWN 411

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            M+ GY  HG  K A++LF         P++ITF+  ++ACSH+G+V+ G+ +F S++ D
Sbjct: 412 SMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSIRAD 471

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPI--EPG--ITVFGAMLGACKIHKNVE 627
           +G+EP +DHY  MVD+LGRAG L+ A   +++MP    P      + A+L +CK+H +V 
Sbjct: 472 FGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDV- 530

Query: 628 LGEKAANRLFELD--------------------PDEGGYHVLLANIYAAASMWDKLAKVR 667
              K A R+  +                      +     V+L+NIYA A  W+++  VR
Sbjct: 531 ---KRAARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKKWEEMTGVR 587

Query: 668 T-IMEK--KGL--QKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETLIDEIKAAG 721
             I E+  KG+   +  GCS +E++  +H F +G    HP+ K I + ++ L + IK+AG
Sbjct: 588 NEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSAG 647

Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           YVPDT+ + HDVE+  +E +L  HSE++AIAFGL+     + + +  NLR+C DCH A K
Sbjct: 648 YVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRICSDCHAAVK 707

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            IS   GREI+VRD  RFH F +G CSC DYW
Sbjct: 708 LISKTVGREILVRDTRRFHHFASGECSCQDYW 739



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 11/448 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I  GL         LV ++ K+  L  A   F+ I  K    +  ++  +A+     +A
Sbjct: 60  MIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREA 119

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +    +M  + V         +L +C  + ++  G+ IHG++I      D+     +VNM
Sbjct: 120 LVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA--KKDVVIGNALVNM 177

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+KCG + EA   F  M  RD+VSW T++   +++G    A+++   M  E    + I+ 
Sbjct: 178 YSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISC 237

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAG--FDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           +++L A +N+G     + +H +    G   D  + V+  L+  Y +CG    AR VFD +
Sbjct: 238 LAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSL 297

Query: 301 K--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDL 356
           +  +RN VSW SMIAAY      +  + ++Q+M+  ++  +   V  +  L AC+ L  L
Sbjct: 298 QHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSAL 357

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
           + G  VH+ +     G ++ +  ++++MY KC  +  A ++F  ++ + +++WN+M+ GY
Sbjct: 358 KVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGY 417

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EK 474
            Q+G    AL  F       + PD  T V+++ A +   +++   W H   IR+ F  E 
Sbjct: 418 TQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVW-HFGSIRADFGMEP 476

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMM 502
           +V     ++DM  + G +  A  L + M
Sbjct: 477 SVDHYVCMVDMLGRAGWLDAAERLVERM 504



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%), Gaps = 22/406 (5%)

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           N   L   + +H   +  G D+   +   LV +Y K G ++ A   FD + ++NV SW  
Sbjct: 46  NARCLAAVEELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTI 105

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +I+A+ + G+  EA+ +F++M  +GV+   VT+   L  C+ + DL  G  +H  +   K
Sbjct: 106 VISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAK 165

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
              DV + N+L++MYSKC  +  A   F ++  + +VSW  MI   +++G  NEA+  F 
Sbjct: 166 --KDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFW 223

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAK 488
           +M S+N+ P+  + ++V+ A + L      + IH  +     E  K + V   LI  Y +
Sbjct: 224 EMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGR 283

Query: 489 CGAVGTARALFDMMNE--RHVTTWNVMIDGYGTHGLGKAAVELFNKML--EGPTKPNDIT 544
           CG+   AR +FD +    R+  +W  MI  Y ++   KA VEL+ +M+  E   K + + 
Sbjct: 284 CGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVA 343

Query: 545 FLCAISACSHSGLVEEGIHYFTSL-KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           +LC + ACS    ++ G      +    +G E  +   GA+V++  + G L EA +    
Sbjct: 344 YLCVLEACSSLSALKVGRQVHEEIVAAGFGDE--LPLAGAIVNMYCKCGSLVEAREVFDG 401

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD------PDE 643
           M     I  + +M+G    H +     K A +LFEL       PDE
Sbjct: 402 MKARNMIA-WNSMMGGYTQHGH----PKRALQLFELACLDGVLPDE 442



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 180/327 (55%), Gaps = 11/327 (3%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L +C+S+K+L   R I   +I +      +    LV+++ K  SL +A   F+ +  
Sbjct: 139 AAVLGICSSIKDLAGGRSIHGRVIAAK--KDVVIGNALVNMYSKCGSLREARASFQEMVV 196

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    + TM+   ++    ++AV     M  ++VAP   +   +L  C ++G+  + + I
Sbjct: 197 RDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISCLAVLGACSNLGDRSQVRVI 256

Query: 161 HGQLIVNGFSLD--LFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQ 216
           H  +   G  LD  L     +++ Y +CG   +A ++FD +    R+ VSW +++A +  
Sbjct: 257 HEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTS 316

Query: 217 NGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           N  A+  ++L   M   EE ++ D +  + +L A +++ +L++G+ VH   + AGF   +
Sbjct: 317 NEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAGFGDEL 376

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            ++ A+V+MY KCG +  AR VFDGMK+RN+++WNSM+  Y + G+P+ A+++F+     
Sbjct: 377 PLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLD 436

Query: 335 GVEPTNVTIMEALHACADLGDLERGIF 361
           GV P  +T +  L AC+  G ++ G++
Sbjct: 437 GVLPDEITFVTILTACSHAGMVKPGVW 463



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 21/300 (7%)

Query: 46  LLEVCTSL---KELRRILPLIIKSGL-CDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPD 100
           +L  C++L    ++R I   I   GL  D+ L     L+  + +  S SDA RVF+ +  
Sbjct: 240 VLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQH 299

Query: 101 --KLDALYHTMLKGYAKFASLDDAVSF----LIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
             +    + +M+  Y         V      + R     + PV Y    +L+ C  +  +
Sbjct: 300 SARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAY--LCVLEACSSLSAL 357

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           + G+++H +++  GF  +L     +VNMY KCG + EA ++FD M  R++++WN+++ G+
Sbjct: 358 KVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGY 417

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDS 272
            Q+G  + AL L      +G   D IT V+IL A ++ G ++ G   H  ++RA  G + 
Sbjct: 418 TQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPG-VWHFGSIRADFGMEP 476

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGM-----KSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            V+    +VDM  + G ++ A  + + M      +   V W +++A+     + + A RI
Sbjct: 477 SVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDVKRAARI 536


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/712 (33%), Positives = 383/712 (53%), Gaps = 30/712 (4%)

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           KL+ L+   L   +K   L +A  FL  M   DV+   ++Y  L + CG +  +  G+ I
Sbjct: 53  KLENLH---LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLI 109

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H +L     +        ++ MY  CG   +  K+FD M  ++LVSW  +++ +A+NG  
Sbjct: 110 HDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGEL 169

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E A+ L + M   G R +    +S+L +      L +GK +H + +RA  ++ + V TA+
Sbjct: 170 EKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAI 229

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +MY +CG +E A+LVFDGM ++N V+W  ++  Y +    E A+ +F +M  +GVE   
Sbjct: 230 CNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDE 289

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
                 L  C  L D + G  +H  + +L   ++VS+   L+  Y KC  ++ A   F +
Sbjct: 290 FVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGR 349

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +     VSW+A+I G++Q+GR+ + +  F  +RS+ +  +SF   SV  A A  + +   
Sbjct: 350 ISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMG 409

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
              H   I+      ++  +A++ MY+KCG +  AR  F+ ++E     W  +I GY  H
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYH 469

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G    A+  F +M     +PN +TF+  ++ACSHSGLV E   Y  S+ +DYG++P +DH
Sbjct: 470 GNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDH 529

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  M+D   RAG L EA + I +MP EP    + ++LG C  H +++LG+ AA  LF LD
Sbjct: 530 YDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLD 589

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P +   ++LL N+Y+A   W++   VR +M ++ L+K   CS + +K +VH         
Sbjct: 590 PGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH--------R 641

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           P        +  L +E   +  +P            +E LL  HSEKLAIAFGL+++   
Sbjct: 642 P--------VRLLNEEDDVSCSLPAR----------KEQLLD-HSEKLAIAFGLISTEDN 682

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + I + KNLR C DCH   K +S+VTGR+I+VRD  RFH FK+G CSC DYW
Sbjct: 683 APILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 243/506 (48%), Gaps = 8/506 (1%)

Query: 41  HPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           H    L E C  L+ L   R I   + ++        +  L+ ++C   S  D  +VF+ 
Sbjct: 88  HSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDE 147

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           +  K    +  ++  YAK   L+ A+     M+   + P    Y  LL+ C     +  G
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELG 207

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           K++H  +I    + ++   T + NMY +CG +E A  +FD M  ++ V+W  ++ G+ Q 
Sbjct: 208 KQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
              E+AL+L  RM  EG   D      +L     +    +GK +H + ++ G +S V+V 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVG 327

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           T LVD Y KCG +E+A   F  +   N VSW+++I+ + + G  E+ ++IF  +  +GV 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
             +        ACA   +L  G   H    +  L + +   +++++MYSKC ++D A   
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +     V+W A+I GYA +G   EAL +F +M+S  ++P++ T ++V+ A +   ++
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 458 RYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMID 515
             AK ++ ++      +  +     +ID Y++ G +  A  L + M  E    +W  ++ 
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLG 567

Query: 516 GYGTH---GLGKAAVELFNKMLEGPT 538
           G   H    LGK A E   ++  G T
Sbjct: 568 GCWAHCDLKLGKIAAENLFRLDPGDT 593


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/726 (32%), Positives = 396/726 (54%), Gaps = 73/726 (10%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           + H +++ +G   D +    ++  Y+      +A  +   +P+  + S+++++    +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
               ++ + +RM   G   D   + ++    A + + + GK +H  A  +G D    V  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 279 ALVDMYAKCGRVETARLVFDGMKSR----------------------------------- 303
           +L  MY +CGR+  AR VFD M  +                                   
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           N+VSWN +++ +   G  +EA+ +FQKM   G  P  VT+   L +  D  +L  G  +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 364 --------------------------------KLLDQLKLGTDVSMTNSLISMYSKCKKV 391
                                           KL D+ ++  +  + N+ I+  S+   V
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEM-METGVCNAYITGLSRNGLV 334

Query: 392 DRAADIFSKLQGKTL----VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSV 447
           D+A ++F   + + +    VSW ++I G AQNG+  EAL  F +M+   +KP+  T+ S+
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394

Query: 448 IPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHV 507
           +PA   ++ + + +  H   +R     +V V +ALIDMYAKCG +  ++ +F+MM  +++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNL 454

Query: 508 TTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS 567
             WN +++GY  HG  K  + +F  ++    KP+ I+F   +SAC   GL +EG  YF  
Sbjct: 455 VCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNM 514

Query: 568 LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + ++YGI+P ++HY  MV+LLGRAG+L EA+D I+++P EP   V+GA+L +C++  NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVD 574

Query: 628 LGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELK 687
           L E AA +LF L+P+  G +VL++NIYAA  MW ++  +R  ME  GL+K PGCS +++K
Sbjct: 575 LAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634

Query: 688 NEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSE 746
           N+V++  +    HPQ  +I   ++ + +E++ +G+ P+ + ++ DVE+  QE +L  HSE
Sbjct: 635 NKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSE 694

Query: 747 KLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVC 806
           KLA+ FGLLN+  G+ + + KNLR+CGDCH   K+IS   GREI +RD +RFH FK+G+C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 807 SCGDYW 812
           SCGD+W
Sbjct: 755 SCGDFW 760


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/681 (35%), Positives = 369/681 (54%), Gaps = 71/681 (10%)

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
              + + ++ H  ++  G   D    T +++ YA      +A  + D +PE ++ S++T+
Sbjct: 26  TASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           +  F++      AL   ++M   G   D   + S + A A + +L+  + VHG A  +GF
Sbjct: 86  IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
           DS   V ++LV MY KC ++  A  VFD M   +VVSW++++AAY   G  +EA R+F +
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205

Query: 331 MLDQGV-----------------------------------EPTNVTIMEALHACADLGD 355
           M D GV                                   EP   TI   L A  DL D
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-------------- 401
           L  GI +H  + +  L +D  ++++LI MY KC      + +F ++              
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325

Query: 402 -------------------QGKTL--VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
                              QG  L  VSW +MI   +QNGR  EAL  F +M+   +KP+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S T+  ++PA   ++ + + K  H   +R     +V+V +ALIDMYAKCG +  +R  FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            +  +++  WN +I GY  HG  K A+E+F+ M     KP+ I+F C +SACS SGL EE
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G +YF S+   YGIE  ++HY  MV LL RAG+L +A+  I++MP+ P   V+GA+L +C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++H NV LGE AA +LFEL+P   G ++LL+NIYA+  MW+++ +VR +M+ KGL+K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
           CS +E+KN+VH   +G   HPQ  +I   L+ L  E+K  GY P+ N +  DVE+  +E 
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQ 685

Query: 740 LLSSHSEKLAIAFGLLNSSPG 760
           +L  HSEKLA+ FGLLN+ PG
Sbjct: 686 ILCGHSEKLAVVFGLLNTPPG 706



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 267/577 (46%), Gaps = 79/577 (13%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            SL + R+    I+K+GL +     TKL+S +      +DA  V + +P+     + T++
Sbjct: 27  ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             ++KF     A+S   +M    + P        +K C  +  ++  +++HG   V+GF 
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG--------FAEL 222
            D F  + +V+MY KC QI +A+++FDRM E D+VSW+ +VA +A+ G        F+E+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 223 ---------------------------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
                                      A+ +   MH  G   D  TI S+LPAV ++  L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---------------------------- 287
            +G  +HGY ++ G  S   VS+AL+DMY KC                            
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 288 ---GRVETARLVFDGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
              G+VE++  +F  +K +    NVVSW SMIA   + G   EA+ +F++M   GV+P +
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNS 386

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VTI   L AC ++  L  G   H    +  + TDV + ++LI MY+KC ++  +   F  
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +  K LV WNA+I GYA +G+  EA+  F  M+    KPD  +   V+ A ++  +    
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 461 K-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYG 518
             + +++  +   E  V     ++ + ++ G +  A A+   M        W  ++    
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCR 566

Query: 519 TH---GLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
            H    LG+ A E   K+ E  P+ P +   L  I A
Sbjct: 567 VHNNVSLGEVAAE---KLFELEPSNPGNYILLSNIYA 600



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 219/476 (46%), Gaps = 88/476 (18%)

Query: 10  SVFTNST---PTQTLHEHKHTLSQ------RAYIP-SRIYRHPSALLLEVC---TSLKEL 56
           +VF+ ST        H+  H LS       R  +P +R+   PSA+  + C   ++LK  
Sbjct: 78  NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVL--PSAV--KACAGLSALKPA 133

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R++  +   SG       Q+ LV ++ K N + DA RVF+ + +     +  ++  YA+ 
Sbjct: 134 RQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQ 193

Query: 117 ASLDDAVSFLIRMRYDDVAPVV---------YNYTYL----------------------- 144
             +D+A      M    V P +         +N++ L                       
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTI 253

Query: 145 ---LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC--------------- 186
              L   GD+ ++  G  IHG +I  G   D    + +++MY KC               
Sbjct: 254 SSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDH 313

Query: 187 ----------------GQIEEAYKMF----DRMPERDLVSWNTIVAGFAQNGFAELALDL 226
                           GQ+E + ++F    D+  E ++VSW +++A  +QNG    AL+L
Sbjct: 314 MDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALEL 373

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M   G + + +TI  +LPA  N+ +L  GKA H +++R G  + V V +AL+DMYAK
Sbjct: 374 FREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAK 433

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CGR++ +R+ FDG+ ++N+V WN++IA Y   G  +EAM IF  M   G +P  ++    
Sbjct: 434 CGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCV 493

Query: 347 LHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           L AC+  G  E G  + + +  +  +   V     ++++ S+  K+++A  +  ++
Sbjct: 494 LSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 193/462 (41%), Gaps = 80/462 (17%)

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           +   SL   +  H + ++ G  +  +++T L+  YA       A LV D +   NV S++
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           ++I A+ +      A+  F +ML +G+ P N  +  A+ ACA L  L+    VH +    
Sbjct: 84  TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-----------------QG--------- 403
              +D  + +SL+ MY KC ++  A  +F ++                 QG         
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203

Query: 404 ---------KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
                      L+SWN MI G+  +G  +EA+  F  M  +  +PD  T+ SV+PA+ +L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN----------- 503
             +     IH  VI+     +  V +ALIDMY KC        +FD M+           
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323

Query: 504 ------------------------ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
                                   E +V +W  MI     +G    A+ELF +M     K
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVK 383

Query: 540 PNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           PN +T  C + AC +   +  G   H F SL++  GI   +    A++D+  + GR+  +
Sbjct: 384 PNSVTIPCLLPACGNIAALMHGKAAHCF-SLRR--GISTDVYVGSALIDMYAKCGRIQAS 440

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
                 +P +  +  + A++    +H       K A  +F+L
Sbjct: 441 RICFDGIPTK-NLVCWNAVIAGYAMHGKA----KEAMEIFDL 477


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/558 (39%), Positives = 340/558 (60%), Gaps = 5/558 (0%)

Query: 259 KAVHGYAMRAGFDSIVNVSTA---LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           K +H +++R G  S+ N       +  + +    +  A  VF  + + NV +WN++I  Y
Sbjct: 35  KQIHAFSIRHGV-SLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGY 93

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            E  NP  A   +++M+   VEP   T    L A +   ++  G  +H +  +    + V
Sbjct: 94  AESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLV 153

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NSL+ +Y+ C   + A  +F  ++ + LV+WN+MI G+A NGR NEAL  F +M  +
Sbjct: 154 FVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVE 213

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            ++PD FT+VS++ A AEL  +   + +H  +++    KN  V  +L+D+YAKCGA+  A
Sbjct: 214 GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREA 273

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           + +F  M+ER+  +W  +I G   +G G+ A+ELF +M      P++ITF+  + ACSH 
Sbjct: 274 QRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHC 333

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G+++EG  YF  +K++ GI P ++HYG MVDLL RAG + +A+++IQ MP++P   ++  
Sbjct: 334 GMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 393

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC IH ++ LGE A + L  L+P   G +VLL+N+YA+   W  +  +R  M K G+
Sbjct: 394 LLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGV 453

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVED 734
           +KTPG SLVEL N V+ F  G   HPQS+ +Y  LE + + +K  GYVP T N + D+E+
Sbjct: 454 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEE 513

Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
             +E  LS HSEK+AIAF LLN+ PG+ I + KNLRVC DCH A K I+ +  REI++RD
Sbjct: 514 EEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRD 573

Query: 795 MHRFHCFKNGVCSCGDYW 812
             RFH F+ G CSC DYW
Sbjct: 574 RSRFHHFRGGSCSCKDYW 591



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 13/377 (3%)

Query: 46  LLEVCTSLK-ELRRILPLIIKSGLC------DQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           LL+ C S K +L++I    I+ G+        +HL  T +VSL      +S A  VF  I
Sbjct: 23  LLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFT-IVSLSAP---MSYAYNVFTVI 78

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +     ++T+++GYA+  +   A  F  +M    V P  + Y +LLK       +R G+
Sbjct: 79  HNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGE 138

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
            IH   I NGF   +F    ++++YA CG  E AYK+F+ M ERDLV+WN+++ GFA NG
Sbjct: 139 AIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNG 198

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
               AL L   M  EG   D  T+VS+L A A +G+L +G+ VH Y ++ G     +V+ 
Sbjct: 199 RPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTN 258

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           +L+D+YAKCG +  A+ VF  M  RN VSW S+I      G  EEA+ +F++M  QG+ P
Sbjct: 259 SLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVP 318

Query: 339 TNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           + +T +  L+AC+  G L+ G  +  ++ ++  +   +     ++ + S+   V +A + 
Sbjct: 319 SEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEY 378

Query: 398 FSKLQGK-TLVSWNAMI 413
              +  +   V W  ++
Sbjct: 379 IQNMPVQPNAVIWRTLL 395



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 206/421 (48%), Gaps = 40/421 (9%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKMFDRMPE 201
           LL+ C       + K+IH   I +G SL+   M    +  + +    +  AY +F  +  
Sbjct: 23  LLQFCASSK--HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            ++ +WNTI+ G+A++     A     +M       D  T   +L A++   ++R G+A+
Sbjct: 81  PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H   +R GF+S+V V  +L+ +YA CG  E+A  VF+ MK R++V+WNSMI  +   G P
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL 381
            EA+ +F++M  +GVEP   T++  L A A+LG LE G  VH  L ++ L  +  +TNSL
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260

Query: 382 ISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
           + +Y+KC  +  A  +FS++  +  VSW ++I+G A NG   EAL  F +M  + + P  
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSE 320

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T V V+ A +           H  ++   FE           M  +CG +         
Sbjct: 321 ITFVGVLYACS-----------HCGMLDEGFE-------YFRRMKEECGIIP-------- 354

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS---HSGLV 558
                +  +  M+D     GL K A E    M   P +PN + +   + AC+   H GL 
Sbjct: 355 ----RIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLGLG 407

Query: 559 E 559
           E
Sbjct: 408 E 408


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/598 (38%), Positives = 344/598 (57%), Gaps = 39/598 (6%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL+  K VH   +R G D    +   ++      G    +  +F   K  N+  +N+MI 
Sbjct: 22  SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
             V   + +E++ I+  M  +G+ P + T    L ACA L D + GI +H L+ +    +
Sbjct: 82  GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141

Query: 374 DVSMTNSLISMYSKCKKVD--------------------------------------RAA 395
           D  +  SL+S+Y KC  +D                                      RA 
Sbjct: 142 DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRAC 201

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
            +F  +  K +VSW++MI GYA NG   EAL+ F KM ++  +PD + MV V+ A A L 
Sbjct: 202 SVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +    W   L+ R+ F  N  + TALIDMYAKCG + +A  +F  M ++ +  WN  I 
Sbjct: 262 ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAIS 321

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           G    G  KAA  LF +M +   +P+  TF+  + AC+H+GLV+EG  YF S+++ + + 
Sbjct: 322 GLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLT 381

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P ++HYG MVDLLGRAG L+EA   ++ MP+E    V+GA+LG C++H++ +L E    +
Sbjct: 382 PEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQ 441

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           L  L+P   G +VLL+NIY+A+  W+  AK+R+IM ++G++K PG S +E+   VH F  
Sbjct: 442 LIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLV 501

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGL 754
           G T HP S++IY  L  L+ ++KA+GYVP T+ +  D+E+  +E+ +  HSEKLAIAFGL
Sbjct: 502 GDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGL 561

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           ++++P   I + KNLRVCGDCH A K+IS  TGREIIVRD +RFHCF +G CSC DYW
Sbjct: 562 ISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 197/415 (47%), Gaps = 40/415 (9%)

Query: 41  HPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           H    L +   SLK L+ +   +++ GL +      K++     + + + + R+F    +
Sbjct: 11  HIKIRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKE 70

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               L++TM+ G     S  +++     MR + ++P  + + +LLK C  + + + G ++
Sbjct: 71  PNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKL 130

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER------------------ 202
           HG ++  G   D F  T +V++Y KCG I+ A+K+FD +PE+                  
Sbjct: 131 HGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKC 190

Query: 203 --------------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
                               D+VSW++++ G+A NG  + ALDL  +M  EG R D   +
Sbjct: 191 REAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAM 250

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           V +L A A +G+L +G        R  F     + TAL+DMYAKCGR+++A  VF GM+ 
Sbjct: 251 VGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRK 310

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IF 361
           +++V WN+ I+     G+ + A  +F +M   G+EP   T +  L AC   G ++ G  +
Sbjct: 311 KDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQY 370

Query: 362 VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILG 415
            + +     L  ++     ++ +  +   +D A  +   +  +   + W A++ G
Sbjct: 371 FNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/733 (35%), Positives = 382/733 (52%), Gaps = 72/733 (9%)

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC------GQIEEAYKMFDRMPERDLV 205
           G +R+  E+H  +  +G  L   +   ++N    C        +  A  +FDRMP    +
Sbjct: 10  GSVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFL 69

Query: 206 SWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGY 264
               + A F  +   +  + L  RMH      D  T   +    A  G+ + +G+ +H  
Sbjct: 70  FDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAA 129

Query: 265 AMRAGFDSIVN-VSTALVDMYAKCGRVETARLVFD---------------GMKS------ 302
             R    S V  +++ ++ MYA+ G    AR  FD               G+        
Sbjct: 130 CFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDD 189

Query: 303 ----------RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
                     RNVV+W  +I+ Y   G   EA+  F  ML  G+ P  VT++  L AC  
Sbjct: 190 ARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQ 249

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNA 411
           L DL  G  +H L+   ++     +  +LI MY+KC    RA ++F  L +G+    WNA
Sbjct: 250 LKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNA 309

Query: 412 MI-------------------------------LGYAQNGRVNEALNYFCKMRSKNIKPD 440
           MI                                GY   GR+ EAL  F KMR   +  D
Sbjct: 310 MIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGAD 369

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           +FTMV ++ A A L  +   + +HA + +   E++V++ TAL+DMY KCG V  A   F 
Sbjct: 370 NFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFK 429

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M+ R V TW+ MI G   +G+GKAA+E F  M       N +T++  ++ACSHS L++E
Sbjct: 430 QMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDE 489

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G  YF  ++  + I P ++HYG M+DLLGR+G L+EA D +Q MP++P   ++ ++L AC
Sbjct: 490 GRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSAC 549

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HKNV+L + AA+ L +L+P E   +V + NIY  +  W+  +K+R +MEK+G++KT G
Sbjct: 550 RVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAG 609

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQEN 739
            S + +  +VH F  G   HPQ   I   +E +   +K+AGY P T+ I  DV++  +E 
Sbjct: 610 YSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQ 669

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
            L +HSEKLAIAFGL++ +P   +HI KNLRVC DCH+A K IS +  REIIVRD  RFH
Sbjct: 670 ALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFH 729

Query: 800 CFKNGVCSCGDYW 812
            F+ GVCSC D+W
Sbjct: 730 HFRGGVCSCNDFW 742



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 228/543 (41%), Gaps = 120/543 (22%)

Query: 105 LYHTMLKGYAKFAS-LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG-EIRRGKEIHG 162
           L+ T L+   + +S  D  +    RM   DV P  + + +L K C   G  +  G+ +H 
Sbjct: 69  LFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHA 128

Query: 163 QLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF- 219
                    ++ L A + +++MYA+ G   +A + FD    +D+V+W T+++G A+ G  
Sbjct: 129 ACFRTLLPSAVPLIA-SPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLL 187

Query: 220 ------------------------------AELALDLVTRMHEEGRRGDFITIVSILPAV 249
                                         A  A+D    M  +G   D +T++ +L A 
Sbjct: 188 DDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSAC 247

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIV---NVSTALVDMYAKC------------------- 287
             +  L  G ++H   M  G   ++    +  AL+DMYAKC                   
Sbjct: 248 GQLKDLNFGCSLH---MLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGP 304

Query: 288 -------------GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
                        G V+ AR +FD M+  +V+++NS+I  Y+ GG   EA+ +F KM   
Sbjct: 305 QPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRH 364

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G+   N T++  L A A LG L +G  +H  ++Q  +  DV +  +L+ MY KC +V+ A
Sbjct: 365 GLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEA 424

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
              F ++  + + +W+AMI G A NG    AL +F  M+      +S T ++V+ A +  
Sbjct: 425 MVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSH- 483

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTT 509
                          SC          L+D           R  FD M   H     +  
Sbjct: 484 ---------------SC----------LLD---------EGRLYFDEMRLLHNIRPQIEH 509

Query: 510 WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC---SHSGLVEEGIHYFT 566
           +  MID  G  GL   A++L   M   P +PN + +   +SAC    +  L +   H+  
Sbjct: 510 YGCMIDLLGRSGLLDEAMDLVQTM---PMQPNAVIWASILSACRVHKNVDLAQNAAHHLL 566

Query: 567 SLK 569
            L+
Sbjct: 567 KLE 569



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 174/389 (44%), Gaps = 40/389 (10%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T ++S   K   L DA R+    P +    +  ++ GY++     +AV     M  D +A
Sbjct: 175 TTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIA 234

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIH-----------GQLIV-----------NGFSLDL 173
           P       +L  CG + ++  G  +H            +L+V            G + ++
Sbjct: 235 PDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREV 294

Query: 174 FAMTG----------VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           F   G          +++ Y K G ++ A  +FD+M + D++++N+++ G+   G    A
Sbjct: 295 FDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREA 354

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L L T+M   G   D  T+V +L A A++G+L  G+A+H    +   +  V + TAL+DM
Sbjct: 355 LLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDM 414

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCGRVE A + F  M  R+V +W++MI      G  + A+  F  M   G    +VT 
Sbjct: 415 YMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTY 474

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKL----GTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +  L AC+    L+ G       D+++L       +     +I +  +   +D A D+  
Sbjct: 475 IAVLTACSHSCLLDEGRLY---FDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQ 531

Query: 400 KLQGK-TLVSWNAMILGYAQNGRVNEALN 427
            +  +   V W +++     +  V+ A N
Sbjct: 532 TMPMQPNAVIWASILSACRVHKNVDLAQN 560


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/717 (33%), Positives = 392/717 (54%), Gaps = 19/717 (2%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELRRI-------LPLIIKSGLCDQHLFQTKLVS 80
           LS RA +  R++  P+    E C  L+ L R        +  I ++ L + +    +LV 
Sbjct: 4   LSIRA-LGRRLFTAPAVASTE-CIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELV- 60

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD---VAPV 137
              K   L +A R+F+ +  K +  + T++ GY       +A+     MR +    + P 
Sbjct: 61  ---KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPF 117

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           + +  +  K CG   ++  G+ +HG  +  G    +F  + +++MY K G+I E  ++F 
Sbjct: 118 ILSLAH--KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH 175

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP R++VSW  I+ G  + G+ + AL   + M       D  T    L A A+ G+L  
Sbjct: 176 EMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNY 235

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H  AM+ GFD    V+  L  MY KCG++E    +F+ M  R+VVSW ++I   V+
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E A++ F +M +  V P   T    +  CA+L  +E G  +H L+  L L   +S+
Sbjct: 296 MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSV 355

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NS+++MY+KC ++  ++ IF ++  + +VSW+ +I GY Q G V+EA      MR +  
Sbjct: 356 ENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGP 415

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP  F + SV+ A   ++++ + K +HA V+    E    V++ALI+MY KCG++  A  
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD      + +W  MI+GY  HG  +  ++LF K+     +P+ +TF+  +SACSH+GL
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+ G HYF ++ K Y I P  +HYG M+DLL RAGRL++A   I+ MP      V+  +L
Sbjct: 536 VDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC++H +VE G + A R+ +L+P+  G H+ LANIYA+   W + A +R +M+ KG+ K
Sbjct: 596 RACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIK 655

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
            PG S +++K+ V +F +G   HPQ + IY  L+ L    + A  V +T  + +D+E
Sbjct: 656 EPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/683 (36%), Positives = 375/683 (54%), Gaps = 16/683 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+       +R G ++H  L+  GF  D      +++MYAKCG++  A ++FD MPER+
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 265

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++ GF  +G A   L L   M   G   +  T+ + L A    G  R G  +HG
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHG 323

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +R GF+    V+ +LV MY+K      AR VFD + SRN+ +WNSMI+ Y   G   +
Sbjct: 324 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 383

Query: 324 AMRIFQKMLDQGVE-PTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDVSMTNS 380
           ++ +F++M  +  E P   T    L AC+ LG    G  VH  +    +   ++  +  +
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 443

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ +Y KC ++  A  +F  L+ +  + W  +I+G+AQ G+V EA+  F +  S  ++ D
Sbjct: 444 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 503

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
              + SV+   A+ +++   K +H    ++    +V V  +L+DMY KCG  G A   F 
Sbjct: 504 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 563

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R+V +W  MI+G G HG G+ A++LF +M     + +++ +L  +SACSHSGLV+E
Sbjct: 564 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 623

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
              YF+ + +D  + P  +HY  MVDLLGRAG L EA + I  MP+EP + V+  +L AC
Sbjct: 624 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 683

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HK+V +G +  + L  +D D    +V+L+NI A A  W +   +R  M +KGL+K  G
Sbjct: 684 RVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGG 743

Query: 681 CSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETLIDEIKAA-GYVPDTN-SIHDVEDYVQ 737
           CS  E+  EVH FY G    HPQ+  I   L  +   ++   GY  D   ++HDV++  +
Sbjct: 744 CSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESR 803

Query: 738 ENLLSSHSEKLAIAFGLLN--------SSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
              L  HSE+LA+   LL            G  + + KNLRVCGDCH   K +S V  R 
Sbjct: 804 VESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRV 863

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           ++VRD +RFH F+NG CSC DYW
Sbjct: 864 VVVRDANRFHRFQNGACSCRDYW 886



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 17/480 (3%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+   ++   ++K G     +    L+ ++ K   L  A  VF+ +P++    +  ++
Sbjct: 214 SSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 273

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+       + +     MR    +P  +  +  LK CG  G  R G +IHG  +  GF 
Sbjct: 274 VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFE 331

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE---LALDLV 227
                   +V MY+K     +A ++FD +P R+L +WN++++G+A  G      L    +
Sbjct: 332 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 391

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYA 285
            R H+E  + D  T  S+L A + +G+ R G  VH      G     N  ++ AL+D+Y 
Sbjct: 392 QRRHDE--QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYV 449

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KC R+  A  VFDG++ RN + W ++I  + + G  +EAM +F++    GV      +  
Sbjct: 450 KCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSS 509

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            +   AD   +E+G  VH    +   G DVS+ NSL+ MY KC     A   F ++  + 
Sbjct: 510 VVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN 569

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW AMI G  ++G   EA++ F +M+++ ++ D    ++++ A +   ++   +   +
Sbjct: 570 VVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFS 629

Query: 466 LVIRSCFEKNVFV----MTALIDMYAKCGAVGTARAL-FDMMNERHVTTWNVMIDGYGTH 520
              R C ++ +         ++D+  + G +  A+ L   M  E  V  W  ++     H
Sbjct: 630 ---RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 686



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 219/441 (49%), Gaps = 27/441 (6%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+DL+  +  E RR     I  +L A A   SLR G  +H   M+ GF S   ++  L+D
Sbjct: 188 AIDLLGFLPMERRR----MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLID 243

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MYAKCG++  A  VFDGM  RNVVSW +++  ++  G   E +R+F +M   G  P   T
Sbjct: 244 MYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFT 303

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +   L AC   G    G+ +H +  +    G DV + NSL+ MYSK +    A  +F  +
Sbjct: 304 LSATLKACG--GGTRAGVQIHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVI 360

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYA 460
             + L +WN+MI GYA  G+  ++L  F +M R  + +PD FT  S++ A + L   R  
Sbjct: 361 PSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 420

Query: 461 KWIH-ALVIRSCFE-KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             +H A+ +R      N  +  AL+D+Y KC  +  A  +FD +  R+   W  +I G+ 
Sbjct: 421 AQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 480

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEP 576
             G  K A+ LF +      + +       ++  +   LVE+G  +H +T+ K   G++ 
Sbjct: 481 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTA-KTPAGLDV 539

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            + +  ++VD+  + G   EA    ++MP    +  + AM+     H +   G +A + L
Sbjct: 540 SVAN--SLVDMYLKCGLTGEAGRRFREMPAR-NVVSWTAMINGVGKHGH---GREAID-L 592

Query: 637 FE------LDPDEGGYHVLLA 651
           FE      ++ DE  Y  LL+
Sbjct: 593 FEEMQAEGVEADEVAYLALLS 613


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/681 (36%), Positives = 387/681 (56%), Gaps = 18/681 (2%)

Query: 17  PTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQ-- 71
           P+Q L + KH L+  A   S         LL+ CTS K +   ++I    I  GL     
Sbjct: 4   PSQALSKSKHLLTATARYQS---------LLQRCTSRKSIPNTKQIHAHTITLGLLSSPY 54

Query: 72  -HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
            H   + L + +        A ++F+ + +     ++ M++ Y       DA+   ++M 
Sbjct: 55  SHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQML 114

Query: 131 YDDVA-PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
                 P  Y Y +++K CGD      G  IH + +++GF  D F    ++ MY  CG++
Sbjct: 115 ASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEM 174

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
           E A ++FD M ER LVSWNT++ G+ +NG  + AL +   M  +G   D  T+VS+LP  
Sbjct: 175 EVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVC 234

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + +  L +G+ VH           ++V  +L+DMYAKCG ++ A+++F  M  R+VVSW 
Sbjct: 235 SYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWT 294

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +M+  Y+  G+   A+ + Q M  + V+P  VT+   L ACA L  L+ G  +H    + 
Sbjct: 295 TMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQ 354

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           KL ++V +  +LI MY+KC  V+ +  +FSK   +    WNA+I G   NG   +A+  F
Sbjct: 355 KLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELF 414

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M  + + P+  T+ S++PA A L+ ++ A+ +H  +IRS F   + V T LID+Y+KC
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474

Query: 490 GAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           G++ +A  +F+ +   ++ + TW+ +I GYG HG G+ A+ LF++M++   KPN+ITF  
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTS 534

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            + ACSH+GLV+EG+  F  + +D  +    DHY  ++DLLGRAGRL EA++ I+ M   
Sbjct: 535 ILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR 594

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   V+GA+LG+C IH+NVELGE AA  LFEL+P   G +VLLANIY+A   W     VR
Sbjct: 595 PNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVR 654

Query: 668 TIMEKKGLQKTPGCSLVELKN 688
            +M   GL+KTP  SL+E++N
Sbjct: 655 LMMNNIGLRKTPAHSLIEVRN 675


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/667 (35%), Positives = 369/667 (55%), Gaps = 91/667 (13%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P    +  LL  C      R  + +H ++++  FS+++F    ++++Y KC  +++A K+
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 196 FDRMPER-------------------------------DLVSWNTIVAGFAQNGFAELAL 224
           FDRMP+R                               D  SWN++V+GFAQ+   E +L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           +   +MH E    +  +  S L A A +  L +G  VH    ++ + + V + +AL+DMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           +KCG V  A  VF GM  RN+V+WNS+I  Y + G   EA+ +F +M+D G+EP  VT+ 
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 345 EALHACADLGDLERGIFVH-KLLDQLKLGTDVSMTNSLISMYSKCKKVD----------- 392
             + ACA L  L+ G+ +H +++   K   D+ + N+L+ MY+KC KV+           
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 393 --------------RAADI------FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                         RAA +      FSK+  + +VSWNA+I GY QNG   EAL  F  +
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           + ++I P  +T  +++ +                        ++FV  +LIDMY KCG++
Sbjct: 373 KRESIWPTHYTFGNLLKS------------------------DIFVGNSLIDMYMKCGSI 408

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
                +F+ M ER   +WN +I GY  +G G  A+++F KML    KP+ +T +  + AC
Sbjct: 409 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 468

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GLVEEG HYF S++ ++G+ P+ DHY  MVDLLGRAG LNEA + I+ MP+ P   V
Sbjct: 469 SHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVV 527

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +G++L ACK+H N+E+G+ AA +L E+DP   G +VLL+N+YA    W  + +VR +M +
Sbjct: 528 WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQ 587

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDV 732
           +G+ K PGCS +E+++ VH F      HP  K+IY+ L+ L +++K  GY+PD N   D 
Sbjct: 588 QGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDAN---DF 644

Query: 733 EDYVQEN 739
           E Y +++
Sbjct: 645 EAYDEQS 651



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 167/585 (28%), Positives = 278/585 (47%), Gaps = 108/585 (18%)

Query: 25  KHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR-------RIL------------PLIIK 65
           KH L +  Y+P+     P A LL+ C   +  R       RIL             LI  
Sbjct: 3   KHGLVRDLYLPNS---SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDV 59

Query: 66  SGLCD-----QHLFQ----------TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            G CD     + LF             L+S+  K   L +AAR+F  +P+     +++M+
Sbjct: 60  YGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMV 119

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+A+    ++++ + ++M  +D     Y++   L  C  + ++  G ++H  +  + +S
Sbjct: 120 SGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYS 179

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D++  + +++MY+KCG +  A ++F  M ER+LV+WN+++  + QNG A  AL++  RM
Sbjct: 180 TDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRM 239

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGR 289
            + G   D +T+ S++ A A++ +L+ G  +H   ++   F   + +  ALVDMYAKC +
Sbjct: 240 MDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSK 299

Query: 290 VETARLVFD-------------------------------GMKSRNVVSWNSMIAAYVEG 318
           V  AR VFD                                M  RNVVSWN++IA Y + 
Sbjct: 300 VNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           G  EEA+R+F+ +  + + PT+ T           G+L              L +D+ + 
Sbjct: 360 GENEEALRLFRLLKRESIWPTHYT----------FGNL--------------LKSDIFVG 395

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           NSLI MY KC  ++  + +F K++ +  VSWNA+I+GYAQNG   EAL  F KM     K
Sbjct: 396 NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK 455

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM----TALIDMYAKCGAVGT 494
           PD  TM+ V+ A +   ++   +  H     S  E  +  +    T ++D+  + G +  
Sbjct: 456 PDHVTMIGVLCACSHAGLVEEGR--HYFF--SMEEHGLIPLKDHYTCMVDLLGRAGCLNE 511

Query: 495 ARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVELFNKMLE 535
           A+ L + M        W  ++     HG   +GK A E   K+LE
Sbjct: 512 AKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAE---KLLE 553


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/585 (39%), Positives = 350/585 (59%), Gaps = 7/585 (1%)

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           MH      D IT   ++      G+++  + VH +    G++    +   L++MY K G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ AR +FD M  RNVVSW +MI+AY       +A+     ML +GV P   T    L A
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C  L +L +   +H  + ++ L +DV + ++LI  YSK  +   A ++F+++    LV W
Sbjct: 127 CDGLLNLRQ---LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N++I G+AQN   +E L+ + +M+  +   D  T+ SV+ A   L+++   + +H  V++
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHGLGKAAVE 528
             +++++ +  AL+DMY KCG++  A  LF  MM E+ V +W+ MI G   +G    A++
Sbjct: 244 --YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF  M     KPN IT L  + ACSH+GLV +G +YF S+K+ +GI+P  +HYG ++DLL
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLL 361

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GRAG+L+EA   I +M  EP    +  +LGAC++HKNV+L   AA  + +LDP + G ++
Sbjct: 362 GRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYI 421

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+NIYA +  W+ +A+VR  M  +G++K PGCS +E+  +VH+F  G   HP+ + I  
Sbjct: 422 LLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKR 481

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            L  LI  +   GYVPDTN +  D+E    E+ L  HSEKLAI FGL++     TIHIRK
Sbjct: 482 ELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRK 541

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLR+CGDCH   K +S +  R I++RD  R+H F+ GVCSCGDYW
Sbjct: 542 NLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 201/384 (52%), Gaps = 10/384 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y+ L+K C   G +++ + +H  +  NG+    F +  ++NMY K G ++EA  +FD MP
Sbjct: 19  YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 78

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           +R++VSW T+++ ++ +     ALD +  M  EG R +  T  S+L A   + +LR    
Sbjct: 79  DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---Q 135

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  ++ G +S V V +AL+D Y+K G    A  VF+ M + ++V WNS+I  + +  +
Sbjct: 136 LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSD 195

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +E + ++++M          T+   L AC  L  LE G  VH  +  LK   D+ + N+
Sbjct: 196 GDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH--VHVLKYDQDLILNNA 253

Query: 381 LISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           L+ MY KC  ++ A  +F+++   K ++SW+ MI G AQNG   +AL  F  M+SK  KP
Sbjct: 254 LLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKP 313

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARA 497
           +  T++ V+ A +   ++    W +   ++  F  +        +ID+  + G +  A  
Sbjct: 314 NYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVK 372

Query: 498 LFDMMN-ERHVTTWNVMIDGYGTH 520
           L   MN E    TW +++     H
Sbjct: 373 LIHEMNHEPDAVTWRILLGACRVH 396



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 198/370 (53%), Gaps = 18/370 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           ++++ R +   +  +G   +      L++++ K+  L +A  +F+ +PD+    + TM+ 
Sbjct: 31  AVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMIS 90

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y+       A+ FLI M  + V P +Y Y+ +L+ C  +  +R   ++HG ++  G   
Sbjct: 91  AYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLES 147

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+F  + +++ Y+K G+  +A  +F+ M   DLV WN+I+ GFAQN   +  L L  RM 
Sbjct: 148 DVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRM- 206

Query: 232 EEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
              +R DF+    T+ S+L A   +  L +G+ VH + ++   D I+N   AL+DMY KC
Sbjct: 207 ---KRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKC 261

Query: 288 GRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           G +E A L+F  M + ++V+SW++MIA   + G   +A+++F+ M  +G +P  +TI+  
Sbjct: 262 GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGV 321

Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGK 404
           L AC+  G +  G +  + + +   G D    +   +I +  +  K+D A  +  ++  +
Sbjct: 322 LFACSHAGLVNDGWYYFQSMKE-HFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHE 380

Query: 405 -TLVSWNAMI 413
              V+W  ++
Sbjct: 381 PDAVTWRILL 390



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 144/287 (50%), Gaps = 7/287 (2%)

Query: 31  RAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           R  +   +Y + S  +L  C  L  LR++   I+K GL      ++ L+  + K     D
Sbjct: 110 REGVRPNMYTYSS--VLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHD 167

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           A  VF  +      ++++++ G+A+ +  D+ +    RM+  D        T +L+ C  
Sbjct: 168 ALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTG 227

Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR-MPERDLVSWNT 209
           +  +  G+++H  ++   +  DL     +++MY KCG +E+A  +F R M E+D++SW+T
Sbjct: 228 LALLELGRQVHVHVL--KYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWST 285

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRA 268
           ++AG AQNGF+  AL L   M  +G + ++ITI+ +L A ++ G +  G           
Sbjct: 286 MIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF 345

Query: 269 GFDSIVNVSTALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAA 314
           G D        ++D+  + G+++ A +L+ +     + V+W  ++ A
Sbjct: 346 GIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/637 (35%), Positives = 370/637 (58%), Gaps = 7/637 (1%)

Query: 84  KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           K   L++A ++F+ +  + +  + T++ GY    +  +A+S   +M    V P ++   +
Sbjct: 13  KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMW---VEPGLHMDPF 69

Query: 144 LL----KVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +L    K CG    +  G+ +HG  +   F   +F  + +V+MY K G+++E   +F  M
Sbjct: 70  ILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEM 129

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           P R++VSW  I+AG  + G+ + AL   + M  +    D  T  S L A A+ G+L  G+
Sbjct: 130 PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGR 189

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H   ++ GF ++  V+  L  MY KCG+++    +F+ M  R+VVSW ++I + V+ G
Sbjct: 190 EIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIG 249

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             E A++ F++M +  V P   T    +  CA LG +E G  +H  + +  L   +S+ N
Sbjct: 250 QEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVAN 309

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           S+++MYSKC ++D A+ +F  L  + ++SW+ MI GYAQ G   EA +Y   MR +  +P
Sbjct: 310 SIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRP 369

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           + F   SV+     ++++   K +HA V+    E+N  V +ALI+MY+KCG++  A  +F
Sbjct: 370 NEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIF 429

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D     ++ +W  MI+GY  HG  + A++LF K+ +   +P+ +TF+  ++ACSH+GLV+
Sbjct: 430 DEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVD 489

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G HYF SL K + I P  DHYG M+DLL RAGRLN+A   IQ MP +    V+  +L A
Sbjct: 490 LGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           C+IH +V+ G++AA ++ +LDP+    H+ LAN+YAA   W + A+VR +M+ KG+ K P
Sbjct: 550 CRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEP 609

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDE 716
           G S ++ K+ V +F SG   HP+ + IY  L+ L  +
Sbjct: 610 GWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQ 646



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 240/472 (50%), Gaps = 9/472 (1%)

Query: 64  IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
           +K+   +     + LV ++ K   + +   VF+ +P +    +  ++ G  +     +A+
Sbjct: 95  VKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEAL 154

Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
           ++   M    V    Y ++  LK C D G +  G+EIH Q +  GF+   F    +  MY
Sbjct: 155 AYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMY 214

Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            KCG+++   ++F+ M +RD+VSW TI+    Q G  E A+    RM E     +  T  
Sbjct: 215 NKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFA 274

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           +++   A +G +  G+ +H + +R G    ++V+ +++ MY+KC +++ A  VF G+  R
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR 334

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +++SW++MI+ Y +GG  EEA      M  +G  P        L  C ++  LE+G  +H
Sbjct: 335 DIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLH 394

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
             +  + L  +  + ++LI+MYSKC  +  A+ IF + +   +VSW AMI GYA++G   
Sbjct: 395 AHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQ 454

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHAL--VIRSCFEKNVFVMT 480
           EA++ F K+    ++PDS T ++V+ A +   ++     + ++L  V + C  K+ +   
Sbjct: 455 EAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY--G 512

Query: 481 ALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG---LGKAAVE 528
            +ID+  + G +  A ++   M  +R    W+ ++     HG    GK A E
Sbjct: 513 CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE 564



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 152/287 (52%), Gaps = 8/287 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I+ GL D       +++++ K   L  A+ VF+ +  +    + TM+ GYA+    ++A
Sbjct: 296 VIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA 355

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
             +L  MR +   P  + +  +L VCG++  + +GK++H  ++  G   +    + ++NM
Sbjct: 356 FDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINM 415

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+KCG I+EA K+FD     ++VSW  ++ G+A++G+++ A+DL  ++ + G R D +T 
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTF 475

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST---ALVDMYAKCGRVETARLVFDG 299
           +++L A ++ G + +G   H +   +    I         ++D+  + GR+  A  +   
Sbjct: 476 IAVLAACSHAGLVDLG--FHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQS 533

Query: 300 MK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM--LDQGVEPTNVTI 343
           M   R+ V W++++ A    G+ +   R  +K+  LD     T++T+
Sbjct: 534 MPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITL 580



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 80/173 (46%), Gaps = 5/173 (2%)

Query: 44  ALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L VC +   L++ +++   ++  GL    + Q+ L++++ K  S+ +A+++F+    
Sbjct: 375 ASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEY 434

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
                +  M+ GYA+     +A+    ++    + P    +  +L  C   G +  G   
Sbjct: 435 NNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHY 494

Query: 161 HGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
              L  V+           ++++  + G++ +A  M   MP +RD V W+T++
Sbjct: 495 FNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/683 (36%), Positives = 375/683 (54%), Gaps = 16/683 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           LL+       +R G ++H  L+  GF  D      +++MYAKCG++  A ++FD MPER+
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           +VSW  ++ GF  +G A   L L   M   G   +  T+ + L A    G  R G  +HG
Sbjct: 70  VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHG 127

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             +R GF+    V+ +LV MY+K      AR VFD + SRN+ +WNSMI+ Y   G   +
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187

Query: 324 AMRIFQKMLDQGVE-PTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDVSMTNS 380
           ++ +F++M  +  E P   T    L AC+ LG    G  VH  +    +   ++  +  +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           L+ +Y KC ++  A  +F  L+ +  + W  +I+G+AQ G+V EA+  F +  S  ++ D
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
              + SV+   A+ +++   K +H    ++    +V V  +L+DMY KCG  G A   F 
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFR 367

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M  R+V +W  MI+G G HG G+ A++LF +M     + +++ +L  +SACSHSGLV+E
Sbjct: 368 EMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 427

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
              YF+ + +D  + P  +HY  MVDLLGRAG L EA + I  MP+EP + V+  +L AC
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
           ++HK+V +G +  + L  +D D    +V+L+NI A A  W +   +R  M +KGL+K  G
Sbjct: 488 RVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGG 547

Query: 681 CSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETLIDEIKAA-GYVPDTN-SIHDVEDYVQ 737
           CS  E+  EVH FY G    HPQ+  I   L  +   ++   GY  D   ++HDV++  +
Sbjct: 548 CSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESR 607

Query: 738 ENLLSSHSEKLAIAFGLLN--------SSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
              L  HSE+LA+   LL            G  + + KNLRVCGDCH   K +S V  R 
Sbjct: 608 VESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRV 667

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           ++VRD +RFH F+NG CSC DYW
Sbjct: 668 VVVRDANRFHRFQNGACSCRDYW 690



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 17/480 (3%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +SL+   ++   ++K G     +    L+ ++ K   L  A  VF+ +P++    +  ++
Sbjct: 18  SSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 77

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+       + +     MR    +P  +  +  LK CG  G  R G +IHG  +  GF 
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFE 135

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE---LALDLV 227
                   +V MY+K     +A ++FD +P R+L +WN++++G+A  G      L    +
Sbjct: 136 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 195

Query: 228 TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN--VSTALVDMYA 285
            R H+E  + D  T  S+L A + +G+ R G  VH      G     N  ++ AL+D+Y 
Sbjct: 196 QRRHDE--QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYV 253

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KC R+  A  VFDG++ RN + W ++I  + + G  +EAM +F++    GV      +  
Sbjct: 254 KCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSS 313

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
            +   AD   +E+G  VH    +   G DVS+ NSL+ MY KC     A   F ++  + 
Sbjct: 314 VVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN 373

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           +VSW AMI G  ++G   EA++ F +M+++ ++ D    ++++ A +   ++   +   +
Sbjct: 374 VVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFS 433

Query: 466 LVIRSCFEKNVFV----MTALIDMYAKCGAVGTARAL-FDMMNERHVTTWNVMIDGYGTH 520
              R C ++ +         ++D+  + G +  A+ L   M  E  V  W  ++     H
Sbjct: 434 ---RICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 210/422 (49%), Gaps = 23/422 (5%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           I  +L A A   SLR G  +H   M+ GF S   ++  L+DMYAKCG++  A  VFDGM 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIF 361
            RNVVSW +++  ++  G   E +R+F +M   G  P   T+   L AC   G    G+ 
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 362 VHKLLDQLKL-GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           +H +  +    G DV + NSL+ MYSK +    A  +F  +  + L +WN+MI GYA  G
Sbjct: 125 IHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 421 RVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIH-ALVIRSCF-EKNVF 477
           +  ++L  F +M R  + +PD FT  S++ A + L   R    +H A+ +R      N  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           +  AL+D+Y KC  +  A  +FD +  R+   W  +I G+   G  K A+ LF +     
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 538 TKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
            + +       ++  +   LVE+G  +H +T+ K   G++  + +  ++VD+  + G   
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTA-KTPAGLDVSVAN--SLVDMYLKCGLTG 360

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE------LDPDEGGYHVL 649
           EA    ++MP    +  + AM+     H +   G +A + LFE      ++ DE  Y  L
Sbjct: 361 EAGRRFREMPAR-NVVSWTAMINGVGKHGH---GREAID-LFEEMQAEGVEADEVAYLAL 415

Query: 650 LA 651
           L+
Sbjct: 416 LS 417


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 344/590 (58%), Gaps = 36/590 (6%)

Query: 259 KAVHGYAMRAGFDSIVNVSTAL----VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           K +H Y +R      V  ++ L    VD  +    ++ A  +F  +++ N+  +N+MI  
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           +    NP++A   + +   QG+ P N+T    + +C  L  +  G   H  + +     D
Sbjct: 94  HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153

Query: 375 VSMTNSLISMYS-------------------------------KCKKVDRAADIFSKLQG 403
           V + NSL+ MY+                               KC  V+ A  +F ++  
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           K LV+W+ MI GYAQN   ++A+  F  ++S+ ++ +   MVSVI + A L  +   +  
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERA 273

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  V+++    N+ + TAL+DMYA+CG++  A  +F+ + ER   +W  +I G   HG  
Sbjct: 274 HDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYS 333

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           + +++ F  M+E    P DITF   +SACSH GLVE G   F S+K+D+ +EP ++HYG 
Sbjct: 334 ERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGC 393

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           MVDLLGRAG+L EA  F+ KMP++P   V+GA+LGAC+IHKN E+GE+    L +L P  
Sbjct: 394 MVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQH 453

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
            GY+VLL+NIYA A  W+K+ ++R +M+ KGL+K PG SL+EL   VH F  G + HP+ 
Sbjct: 454 SGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEM 513

Query: 704 KRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGST 762
            +I    E ++  I+AAGY  +T +++ D+++  +E+ L  HSEKLAIAFG++ S  G+ 
Sbjct: 514 DKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTP 573

Query: 763 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I I KNLRVC DCH ATK IS V GRE+IVRD +RFH F+ G+CSC DYW
Sbjct: 574 IRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 190/358 (53%), Gaps = 39/358 (10%)

Query: 40  RHPSALLLEVCTSLKELRRILPLIIKSGL-CDQHLFQTKLVSLFC----KYNSLSD-AAR 93
           ++P    LE C+ L  L+ I   +I++ + CD  +F    +  FC       SL D A+R
Sbjct: 17  KNPKLFSLETCSDLTHLKIIHAYMIRTHIICD--VFAASRLIAFCVDPSSGTSLIDYASR 74

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F  I +    +++ M++G++   + D A  F ++ +   + P    + +L+K C  +  
Sbjct: 75  IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA----------------------------- 184
           I  G + HG +I +GF  D++    +V+MYA                             
Sbjct: 135 ISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRG 194

Query: 185 --KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
             KCG +E A K+FD+MPE++LV+W+T+++G+AQN   + A++L   +  +G R +   +
Sbjct: 195 FNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVM 254

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
           VS++ + A++G+L +G+  H Y ++ G    + + TALVDMYA+CG ++ A  VF+ +  
Sbjct: 255 VSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE 314

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           R+ +SW ++IA     G  E +++ F  M++ G+ P ++T    L AC+  G +ERG 
Sbjct: 315 RDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGF 372



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 2/254 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T ++  F K   +  A ++F+ +P+K    + TM+ GYA+    D AV     ++   V 
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
                   ++  C  +G +  G+  H  ++ NG +L+L   T +V+MYA+CG I++A  +
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWV 308

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +PERD +SW  ++AG A +G++E +L     M E G     IT  ++L A ++ G +
Sbjct: 309 FEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLV 368

Query: 256 RIGKAVHGYAMR-AGFDSIVNVSTALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIA 313
             G  +     R    +  +     +VD+  + G++E A R V       N   W +++ 
Sbjct: 369 ERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLG 428

Query: 314 AYVEGGNPEEAMRI 327
           A     N E   R+
Sbjct: 429 ACRIHKNAEIGERV 442


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/608 (37%), Positives = 357/608 (58%), Gaps = 7/608 (1%)

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WN  +   A       ++ L   M   G   D  +   IL + A++     G+ +H +  
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEA 324
           + G ++   V TAL+ MY KCG V  AR VF+     S+  V +N++I+ Y       +A
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
             +F++M + GV   +VT++  +  C     L  G  +H    +  L ++V++ NS I+M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  V+    +F ++  K L++WNA+I GY+QNG   + L  + +M+S  + PD FT+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           VSV+ + A L   +    +  LV  + F  NVFV  A I MYA+CG +  ARA+FD+M  
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + + +W  MI  YG HG+G+  + LF+ M++   +P+   F+  +SACSHSGL ++G+  
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F ++K++Y +EP  +HY  +VDLLGRAGRL+EA +FI+ MP+EP   V+GA+LGACKIHK
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           NV++ E A  ++ E +P+  GY+VL++NIY+ +   + + ++R +M ++  +K PG S V
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
           E K  VH F +G   H Q++ ++  L+ L   +       D +   +V    +E     H
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE-----H 555

Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
           SE+LAIAFG+LNS PG+ I + KNLRVC DCH   K +S +  R+ +VRD  RFH FK+G
Sbjct: 556 SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDG 615

Query: 805 VCSCGDYW 812
           VCSC DYW
Sbjct: 616 VCSCKDYW 623



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 226/461 (49%), Gaps = 6/461 (1%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++  L+  A  +   +++S    M     +P  +++ ++LK C  +     G+++H  + 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS--WNTIVAGFAQNGFAELA 223
             G   + F +T +++MY KCG + +A K+F+  P+   +S  +N +++G+  N     A
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             +  RM E G   D +T++ ++P       L +G+++HG  ++ G DS V V  + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG VE  R +FD M  + +++WN++I+ Y + G   + + ++++M   GV P   T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  L +CA LG  + G  V KL++      +V ++N+ ISMY++C  + +A  +F  +  
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKW 462
           K+LVSW AMI  Y  +G     L  F  M  + I+PD    V V+ A +   +  +  + 
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
             A+      E      + L+D+  + G +  A    + M  E     W  ++     H 
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
               A   F K++E   +PN+I +   +S        +EGI
Sbjct: 441 NVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGI 479



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 16/368 (4%)

Query: 45  LLLEVCTSLKELRRILPL--------IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
            +L+ C SL      LP+        + K G   +    T L+S++CK   ++DA +VFE
Sbjct: 58  FILKSCASLS-----LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE 112

Query: 97  --PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
             P   +L   Y+ ++ GY   + + DA     RM+   V+        L+ +C     +
Sbjct: 113 ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
             G+ +HGQ +  G   ++  +   + MY KCG +E   ++FD MP + L++WN +++G+
Sbjct: 173 WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY 232

Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
           +QNG A   L+L  +M   G   D  T+VS+L + A++G+ +IG  V       GF   V
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            VS A + MYA+CG +  AR VFD M  +++VSW +MI  Y   G  E  + +F  M+ +
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDR 393
           G+ P     +  L AC+  G  ++G+ + + +  + KL       + L+ +  +  ++D 
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412

Query: 394 AADIFSKL 401
           A +    +
Sbjct: 413 AMEFIESM 420


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/588 (39%), Positives = 340/588 (57%), Gaps = 34/588 (5%)

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYA--KCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
           K  H   +R G  +  +    ++   A  K G +  A  VFD +   +   +N++   Y+
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD-V 375
                   + ++ +ML + V P   T    + AC     +E G  +H  + +   G D  
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 376 SMTN------------------------------SLISMYSKCKKVDRAADIFSKLQGKT 405
           S+ N                              SLI+ YS+   VD+A ++F  +  + 
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
            VSWNAMI  Y Q+ R++EA   F +MR +N+  D F   S++ A   L  +   KWIH 
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
            + +S  E +  + T +IDMY KCG +  A  +F+ + ++ +++WN MI G   HG G+A
Sbjct: 277 YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 336

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ELF +M      P+ ITF+  +SAC+HSGLVEEG HYF  + +  G++P M+H+G MV
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 396

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGRAG L EA   I +MP+ P   V GA++GAC+IH N ELGE+   ++ EL+P   G
Sbjct: 397 DLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 456

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
            +VLLAN+YA+A  W+ +AKVR +M  +G++K PG S++E ++ V  F +G   HPQ+K 
Sbjct: 457 RYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKE 516

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           IY  L+ +++ I++ GYVPDT+ + HD+++  +EN L  HSEKLAIAFGLL + PG T+ 
Sbjct: 517 IYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLR 576

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           I KNLR+C DCH A+K IS V  REII+RD +RFH F+ G CSC DYW
Sbjct: 577 ISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 35/347 (10%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC---KYNSLSDAARVFEPIPDKLD 103
           L+ C+++ EL++    II+ GL   +    +++  FC   K   L+ A  VF+ IP    
Sbjct: 27  LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIK-FCAISKSGDLNYALEVFDKIPHPDA 85

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            +Y+T+ +GY ++    + +    RM +  V+P  + Y  L++ C     I  GK+IH  
Sbjct: 86  YIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAH 145

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           ++  GF  D F++  +++MY     +E+A ++FD MP+RD+VSW +++ G++Q GF + A
Sbjct: 146 VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205

Query: 224 LD-------------------------------LVTRMHEEGRRGDFITIVSILPAVANV 252
            +                               L  RM  E    D     S+L A   +
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           G+L  GK +HGY  ++G +    ++T ++DMY KCG +E A  VF+ +  + + SWN MI
Sbjct: 266 GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
                 G  E A+ +F++M  + V P  +T +  L ACA  G +E G
Sbjct: 326 GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEG 372



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 166/336 (49%), Gaps = 15/336 (4%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL++ RR+   + +  +       T L++ + ++  +  A  VFE +P++    ++ M+ 
Sbjct: 170 SLEQARRVFDNMPQRDVVSW----TSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIA 225

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y +   L +A +   RMR ++V    +    +L  C  +G + +GK IHG +  +G  L
Sbjct: 226 AYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIEL 285

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D    T V++MY KCG +E+A ++F+ +P++ + SWN ++ G A +G  E A++L   M 
Sbjct: 286 DSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME 345

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRV 290
            E    D IT V++L A A+ G +  GK    Y     G    +     +VD+  + G +
Sbjct: 346 REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLL 405

Query: 291 ETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN---VTIMEA 346
           E AR + + M  + +     +++ A    GN E   +I +K+++  +EP N     ++  
Sbjct: 406 EEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIE--LEPHNSGRYVLLAN 463

Query: 347 LHACADLGDLERGIFVHKLLDQ--LKLGTDVSMTNS 380
           L+A A  G  E    V KL++   +K     SM  S
Sbjct: 464 LYASA--GRWEDVAKVRKLMNDRGVKKAPGFSMIES 497



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 42/326 (12%)

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM--YSKCKKVDRAADIFSKLQG 403
            L +C+ + +L++    H  + +L L  D      +I     SK   ++ A ++F K+  
Sbjct: 26  GLDSCSTMAELKQ---YHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH 82

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
                +N +  GY +       +  + +M  K++ P+ FT   +I A      I   K I
Sbjct: 83  PDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQI 142

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           HA V++  F  + F +  LI MY    ++  AR +FD M +R V +W  +I GY   G  
Sbjct: 143 HAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFV 202

Query: 524 KAAVELF-----------NKMLEGPTKPNDI------------------TFLCA--ISAC 552
             A E+F           N M+    + N +                   F+ A  +SAC
Sbjct: 203 DKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSAC 262

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +  G +E+G      ++K  GIE        ++D+  + G L +A +   ++P + GI+ 
Sbjct: 263 TGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISS 320

Query: 613 FGAMLGACKIHKNVELGEKAANRLFE 638
           +  M+G   +H   E    AA  LF+
Sbjct: 321 WNCMIGGLAMHGKGE----AAIELFK 342



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 4/162 (2%)

Query: 43  SALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           +A +L  CT L  L +   I   I KSG+       T ++ ++CK   L  A+ VF  +P
Sbjct: 255 AASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELP 314

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K  + ++ M+ G A     + A+     M  + VAP    +  +L  C   G +  GK 
Sbjct: 315 QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKH 374

Query: 160 IHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
               +  V G    +     +V++  + G +EEA K+ + MP
Sbjct: 375 YFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 416


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/651 (36%), Positives = 357/651 (54%), Gaps = 33/651 (5%)

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVG 253
           +F ++P       N ++   +++ F E  + L   +        D  +  S+L AV+ V 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +   G  +HG A + GF     + T L+ MYA C R+  ARL+FD M   + V+WN +I 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y + G+ ++A+R+F+ M    ++P +V +   L AC   G+L  G  +H+ +       
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGK----------------------------- 404
           D  +  +LI+MY+ C  +D A  I+  L  K                             
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 405 --TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
              LV W+AMI GYA++ +  EAL  F +M  K   PD  TM+SVI A + +  +  A W
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  V RS F + + V  ALIDMYAKCG +  AR +F+ M  ++V +W+ MI+ +  HG 
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
             +A++LF +M E   +PN +TF+  + AC H+GLVEEG   F+S+  ++GI P  +HYG
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
            MVDL  RA  L +A + I+ MP  P + ++G+++ AC++H   ELGE AA RL EL+PD
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
             G  V+L+NIYA    W+ +  +R  M  KG+ K    S +E+ N+VH F      H Q
Sbjct: 556 HDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQ 615

Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
           S  IY  L+ ++ ++K  GY P T+ I  D+E+  ++ L+  HSEKLA+ +GL++    S
Sbjct: 616 SDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNES 675

Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I I KNLR+C DCH+  K +S V   EI+VRD  RFH    G+CSC DYW
Sbjct: 676 CIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 41/415 (9%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L  K G  D    QT L++++     + DA  +F+ +       ++ ++ GY +    DD
Sbjct: 146 LASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDD 205

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+     MR  D+ P       +L  CG  G +  G+ IH  +  NG+++D    T ++N
Sbjct: 206 ALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALIN 265

Query: 182 MYAKCGQIEEAYKM-------------------------------FDRMPERDLVSWNTI 210
           MYA CG ++ A K+                               FD+M ERDLV W+ +
Sbjct: 266 MYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAM 325

Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
           ++G+A++   + AL L   M ++    D IT++S++ A ++VG+L     +H Y  R+GF
Sbjct: 326 ISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGF 385

Query: 271 DSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK 330
              ++V+ AL+DMYAKCG +  AR VF+ M  +NV+SW+SMI A+   GN + A+++F++
Sbjct: 386 GRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRR 445

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS----LISMYS 386
           M +  +EP  VT +  L+AC   G +E G    KL   +     +S T      ++ +Y 
Sbjct: 446 MKEVNIEPNGVTFIGVLYACGHAGLVEEG---EKLFSSMINEHGISPTREHYGCMVDLYC 502

Query: 387 KCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +   + +A ++   +     ++ W +++     +G     L  F   R   ++PD
Sbjct: 503 RANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE--LGEFAAKRLLELEPD 555


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/528 (43%), Positives = 325/528 (61%), Gaps = 3/528 (0%)

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
           G +  AR +FD M       WN+++  YV+ G P++A+ ++ KM   GV P   T    +
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            ACA+L +L  G+ +H  + +  L    ++   L+ MY K  ++  A  +F  +  + LV
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           +WNA+I    Q G  ++AL  F +M    IKPDS T+VS + A   L  +   + I+   
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
                + N+ V  A +DM AKCG +  A  LFD M +R+V +W+ +I GY  +G  + A+
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK--DYGIEPVMDHYGAMV 585
            LF++M     +PN +TFL  +SACSH+G V EG  YF  + +  D  I+P  +HY  MV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
           DLLGR+G L EA++FI+ MPIE    ++GA+LGAC IH+N++LG+  A+ LFEL P+   
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442

Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
           YHVLL+N+YAAA  W  + KVR  M+KKG +K    S VE   E+H  Y G   HPQS  
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502

Query: 706 IYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIH 764
           I   LE L+ ++K+ GY+P+T+S+ HDVED  +E+ LS+HSEKLAIAF L+N SP   I 
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562

Query: 765 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + KNLR+CGDCH   K +S +T REII+RD +RFH FKNG+CSC D+W
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 154/272 (56%)

Query: 88  LSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV 147
           +S A ++F+ +      L++T++KGY K    D AVS   +MR+  V P  + + +++K 
Sbjct: 85  MSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKA 144

Query: 148 CGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
           C ++ E+  G  +HG ++ +G        T ++ MY K G++  A  +F  M ERDLV+W
Sbjct: 145 CAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAW 204

Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
           N ++A   Q GF+  AL     M   G + D +TIVS L A  ++G L  G+ ++ +A  
Sbjct: 205 NALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFARE 264

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
            G DS + V  A +DM AKCG ++ A  +FD M  RNV+SW+++I  Y   G  E+A+ +
Sbjct: 265 EGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALAL 324

Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           F +M +QGV+P  VT +  L AC+  G +  G
Sbjct: 325 FSRMKNQGVQPNYVTFLAVLSACSHTGRVNEG 356



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 179/339 (52%), Gaps = 6/339 (1%)

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G +  A ++FD M +     WNTI+ G+ +NG  + A+ +  +M   G R D  T   ++
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
            A A +  L  G  +HG+ ++ G + +  V T L+ MY K G +  A  +F  M  R++V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +WN++IA  V+ G   +A++ F++M   G++P +VTI+ AL AC  LG LE G  +++  
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
            +  + +++ + N+ + M +KC  +D+A ++F ++  + ++SW+ +I GYA NG   +AL
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV----MTAL 482
             F +M+++ ++P+  T ++V+ A +    +    W +   +    +KN+         +
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEG-WQYFNFMAQSDDKNIQPRKEHYACM 381

Query: 483 IDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
           +D+  + G +  A     +M  E     W  ++     H
Sbjct: 382 VDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/572 (37%), Positives = 348/572 (60%), Gaps = 1/572 (0%)

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE-AYKMFDRMPERDLVSWNTIVAGFAQN 217
           ++HG  +   F  D+   T  ++MY KC  + + + ++F+ +P  +L S+N I+ G+A++
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
                AL +   + + G   D +++     A A +     G  VHG +M++   S + V+
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 351

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            A++DMY KCG +  A LVF+ M SR+ VSWN++IAA+ + GN E+ + +F  ML  G+E
Sbjct: 352 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 411

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P   T    L ACA    L  G+ +H  + + ++G D  +  +LI MYSKC  +++A  +
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKL 471

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
             +L  +T+VSWNA+I G++   +  EA   F KM    + PD+FT  +++   A L  +
Sbjct: 472 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 531

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
              K IHA +I+   + + ++ + L+DMY+KCG +   + +F+    R   TWN M+ GY
Sbjct: 532 ELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGY 591

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
             HGLG+ A+++F  M     KPN  TFL  + AC H GLVE+G+HYF S+  +YG++P 
Sbjct: 592 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 651

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
           ++HY  +VD++GR+G++++A + I+ MP E    ++  +L  CKIH NVE+ EKAA  + 
Sbjct: 652 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSIL 711

Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
           +L+P++   +VLL+NIYA A MW+++ K+R +M   GL+K PGCS +E+K+EVH+F  G 
Sbjct: 712 QLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGD 771

Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
             HP+SK IY  L+ L DE+K  GY+PDT+ I
Sbjct: 772 KAHPRSKEIYENLDVLTDEMKWVGYMPDTDFI 803



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 230/451 (50%), Gaps = 7/451 (1%)

Query: 76  TKLVSLFCKYNSLSDAA-RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           T  + ++ K N+LSD + ++F  +P+     Y+ ++ GYA+     +A+     ++   +
Sbjct: 250 TATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 309

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
                + +   + C  +     G ++HG  + +    ++     +++MY KCG + EA  
Sbjct: 310 GLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 369

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F+ M  RD VSWN I+A   QNG  E  L L   M + G   D  T  S+L A A   +
Sbjct: 370 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 429

Query: 255 LRIGKAVHGYAM--RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           L  G  +H   +  R G DS V +  AL+DMY+KCG +E A  + D +  + VVSWN++I
Sbjct: 430 LNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 487

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + +      EEA + F KML+ GV+P N T    L  CA+L  +E G  +H  + + +L 
Sbjct: 488 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 547

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           +D  ++++L+ MYSKC  +     IF K   +  V+WNAM+ GYAQ+G   EAL  F  M
Sbjct: 548 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 607

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           + +N+KP+  T ++V+ A   + ++     + H+++     +  +   + ++D+  + G 
Sbjct: 608 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 667

Query: 492 VGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
           V  A  L + M  E     W  ++     HG
Sbjct: 668 VSKALELIEGMPFEADAVIWRTLLSXCKIHG 698



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 263/570 (46%), Gaps = 81/570 (14%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           ++++ + C D   +  GK+ H ++I+  F   +F    ++ MY KC  +  A+K+FD MP
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMP 104

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVT---------------RMHEEGRRGDFITIVSI 245
           +RD VSWN ++ G+A  G   +A  L                 RM   G   D  T   +
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVV 164

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC--------GRVE------ 291
           L + +++     G  +HG A++ GFD  V   +AL+DMYAKC        G +E      
Sbjct: 165 LKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQ 224

Query: 292 -------------------------TARL---------------VFDGMKSRNVVSWNSM 311
                                    TA L               +F+ + + N+ S+N++
Sbjct: 225 KAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAI 284

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL-GDLERGIFVHKLLDQLK 370
           I  Y       EA+ +F+ +   G+    V++  A  ACA + GDLE G+ VH L  +  
Sbjct: 285 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSL 343

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
             +++ + N+++ MY KC  +  A  +F ++  +  VSWNA+I  + QNG   + L+ F 
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403

Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
            M    ++PD FT  SV+ A A    +     IH  +I+S    + FV  ALIDMY+KCG
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCG 463

Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
            +  A  L D + E+ V +WN +I G+      + A + F+KMLE    P++ T+   + 
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523

Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEP 608
            C++   VE G      + K    E   D Y    +VD+  + G + +     +K P   
Sbjct: 524 TCANLVTVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 580

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFE 638
            +T + AM+     H    LGE+A  ++FE
Sbjct: 581 FVT-WNAMVCGYAQHG---LGEEAL-KIFE 605



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 144/300 (48%), Gaps = 7/300 (2%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L+ C   + L     I   IIKS +         L+ ++ K   +  A ++ + + ++ 
Sbjct: 420 VLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 479

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++ ++ G++     ++A     +M    V P  + Y  +L  C ++  +  GK+IH 
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           Q+I      D +  + +V+MY+KCG +++   +F++ P RD V+WN +V G+AQ+G  E 
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
           AL +   M  E  + +  T +++L A  ++G +  G    H      G D  +   + +V
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 659

Query: 282 DMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           D+  + G+V  A  + +GM    + V W ++++     GN E A +    +L   +EP +
Sbjct: 660 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQ--LEPED 717



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 5/185 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C +L  +   ++I   IIK  L       + LV ++ K  ++ D   +FE  P+
Sbjct: 519 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 578

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE- 159
           +    ++ M+ GYA+    ++A+     M+ ++V P    +  +L+ CG +G + +G   
Sbjct: 579 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 638

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNG 218
            H  L   G    L   + VV++  + GQ+ +A ++ + MP E D V W T+++    +G
Sbjct: 639 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHG 698

Query: 219 FAELA 223
             E+A
Sbjct: 699 NVEVA 703



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 162/438 (36%), Gaps = 100/438 (22%)

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           Q       T       C+D   L  G   H  +   +    V +TN LI MY KC  +  
Sbjct: 36  QATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGF 95

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF-------C--------KMRSKNIK 438
           A  +F  +  +  VSWNAM+ GYA  G +  A   F       C        +M      
Sbjct: 96  AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTV 155

Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC--------- 489
            D  T   V+ + + L        IH L ++  F+ +V   +AL+DMYAKC         
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRG 215

Query: 490 -------------GA-----------------VGTA---------------RALFDMMNE 504
                        GA                 +GTA                 LF+ +  
Sbjct: 216 GLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN 275

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS-----HSGLVE 559
            ++ ++N +I GY     G  A+ +F  + +     ++++   A  AC+       GL  
Sbjct: 276 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV 335

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
            G+   +  + +  +        A++D+ G+ G L EA    ++M     ++ + A++ A
Sbjct: 336 HGLSMKSLCQSNICVA------NAILDMYGKCGALVEACLVFEEMVSRDAVS-WNAIIAA 388

Query: 620 CKIHKNVELGEKAANRLF------ELDPDEGGYHVLLANIYAAASMWDKL-----AKVRT 668
            + + N    E+    LF       ++PDE  Y     ++  A + W  L        R 
Sbjct: 389 HEQNGN----EEKTLSLFVWMLQSGMEPDEFTY----GSVLKACAGWQALNCGMEIHNRI 440

Query: 669 IMEKKGLQKTPGCSLVEL 686
           I  + GL    G +L+++
Sbjct: 441 IKSRMGLDSFVGIALIDM 458


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/645 (37%), Positives = 368/645 (57%), Gaps = 49/645 (7%)

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA-QNGFAELALDLVT 228
           S ++ +   V+  + + G +  A ++F+ M  +  V+WN+++AG++ + G  ++A  L  
Sbjct: 2   SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
           R+ E                  ++ S  I                      ++  Y    
Sbjct: 62  RIPE-----------------PDIFSYNI----------------------MLACYLHNA 82

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            VE+ARL FD M  ++  SWN+MI+ + + G  ++A  +F  M  +     N  I   + 
Sbjct: 83  DVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVE 142

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           +    GDL+      +L +   + + V+ T ++I+ + K  K++ A   F ++  K LV+
Sbjct: 143 S----GDLD---LAKQLFEVAPVRSVVAWT-AMITGFMKFGKIELAEKYFEEMPMKNLVT 194

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           WNAMI GY +N +    L  F +M     +P+  ++ SV+   + LS ++  K +H L+ 
Sbjct: 195 WNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLIC 254

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +S    N+   T+L+ MY KCG +  A  LF +M ++ V TWN MI GY  HG G+ A+ 
Sbjct: 255 KSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALY 314

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF+KM +   KP+ ITF+  +SAC+H+G V+ GI YF S+ +DYG+E   DHY  +VDLL
Sbjct: 315 LFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLL 374

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GR G+L EA D I+KMP +P   +FG +LGAC+IHKN+EL E AA  L  LDP+    +V
Sbjct: 375 GRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYV 434

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
            LAN+YAA + WD +A VR  M+   + KTPG S +E+K+ VH F SG   HP+   I+ 
Sbjct: 435 QLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHE 494

Query: 709 FLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            L  L  +++ AGYVPD   ++HDV +  ++ +L  HSEKLAIA+GL+    G+ I + K
Sbjct: 495 KLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFK 554

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVCGDCH+ATKYIS + GR IIVRD  RFH F+ G CSCGDYW
Sbjct: 555 NLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 187/376 (49%), Gaps = 48/376 (12%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
            ++++   +   L+ A RVFE +  K    +++ML GY+                     
Sbjct: 9   NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSN-------------------- 48

Query: 136 PVVYNYTYLLKVCGDVGEIRRGK-EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
                              RRGK ++  QL       D+F+   ++  Y     +E A  
Sbjct: 49  -------------------RRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARL 89

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
            FD+MP +D  SWNT+++GF+QNG  + A +L   M       + ++  +++      G 
Sbjct: 90  FFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR----NSVSWNAMISGYVESGD 145

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L + K +      A   S+V   TA++  + K G++E A   F+ M  +N+V+WN+MIA 
Sbjct: 146 LDLAKQLFEV---APVRSVV-AWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAG 201

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y+E    E  +++F++M++ G  P   ++   L  C++L  L+ G  VH+L+ +  +  +
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           ++   SL+SMY KC  ++ A  +F  +  K +V+WNAMI GYAQ+G   +AL  F KMR 
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321

Query: 435 KNIKPDSFTMVSVIPA 450
           + +KPD  T V+V+ A
Sbjct: 322 EGMKPDWITFVAVLSA 337



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 203/401 (50%), Gaps = 21/401 (5%)

Query: 85  YNSLSDAARVF-EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
           +N+  ++AR+F + +P K  A ++TM+ G+++   +D A    +      V PV  + ++
Sbjct: 80  HNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFL------VMPVRNSVSW 133

Query: 144 LLKVCGDV--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
              + G V  G++   K++     V      + A T ++  + K G+IE A K F+ MP 
Sbjct: 134 NAMISGYVESGDLDLAKQLFEVAPVRS----VVAWTAMITGFMKFGKIELAEKYFEEMPM 189

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           ++LV+WN ++AG+ +N  AE  L L  RM E G R +  ++ S+L   +N+ +L++GK V
Sbjct: 190 KNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQV 249

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
           H    ++     +   T+L+ MY KCG +E A  +F  M  ++VV+WN+MI+ Y + G  
Sbjct: 250 HQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAG 309

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNS 380
           E+A+ +F KM D+G++P  +T +  L AC   G ++ GI + + ++    +         
Sbjct: 310 EKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTC 369

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           ++ +  +  K+  A D+  K+  K   +    +LG  +  + N  L  F      N+ P+
Sbjct: 370 VVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHK-NLELAEFAAKNLLNLDPE 428

Query: 441 SFT-MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
           S    V +    A ++     +W H  ++R   + N  + T
Sbjct: 429 SAAGYVQLANVYAAMN-----RWDHVAMVRRSMKDNKVIKT 464



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 126/223 (56%), Gaps = 2/223 (0%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +++ F K+  +  A + FE +P K    ++ M+ GY +    ++ +    RM      
Sbjct: 165 TAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFR 224

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P   + + +L  C ++  ++ GK++H  +  +  S ++ A T +++MY KCG +E+A+K+
Sbjct: 225 PNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKL 284

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  MP++D+V+WN +++G+AQ+G  E AL L  +M +EG + D+IT V++L A  + G +
Sbjct: 285 FLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFV 344

Query: 256 RIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGR-VETARLV 296
            +G       +R  G ++  +  T +VD+  + G+ VE   L+
Sbjct: 345 DLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLI 387



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 33/350 (9%)

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           KS NV+S N +I  ++  G+   A+R+F+ M  +    T VT    L   ++     RG 
Sbjct: 1   KSSNVISSNRVITNHIRSGDLNSALRVFESMTVK----TTVTWNSMLAGYSN----RRGK 52

Query: 361 F--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
                +L D++    D+   N +++ Y     V+ A   F ++  K   SWN MI G++Q
Sbjct: 53  IKVARQLFDRIP-EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQ 111

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV-IRSCFEKNVF 477
           NG +++A   F  M  +N    S +  ++I    E   +  AK +  +  +RS     V 
Sbjct: 112 NGMMDQARELFLVMPVRN----SVSWNAMISGYVESGDLDLAKQLFEVAPVRS-----VV 162

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
             TA+I  + K G +  A   F+ M  +++ TWN MI GY  +   +  ++LF +M+E  
Sbjct: 163 AWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESG 222

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG---RAGRL 594
            +PN  +    +  CS+   ++ G      + K     PV  +  A   LL    + G L
Sbjct: 223 FRPNPSSLSSVLLGCSNLSALKLGKQVHQLICK----SPVSWNITAGTSLLSMYCKCGDL 278

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
            +AW     MP +  +  + AM+     H     GEKA   LF+   DEG
Sbjct: 279 EDAWKLFLVMP-QKDVVTWNAMISGYAQHG---AGEKAL-YLFDKMRDEG 323



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 41  HPSAL--LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVF 95
           +PS+L  +L  C++L  L+   ++  LI KS +       T L+S++CK   L DA ++F
Sbjct: 226 NPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLF 285

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
             +P K    ++ M+ GYA+  + + A+    +MR + + P    +  +L  C   G + 
Sbjct: 286 LVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVD 345

Query: 156 RGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            G E    ++ + G        T VV++  + G++ EA  +  +MP
Sbjct: 346 LGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMP 391


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/560 (40%), Positives = 334/560 (59%), Gaps = 11/560 (1%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD-GMKSRNV-VSWNSMIAAY 315
           GK +H +  + G      V T+L+ MY KC  ++ AR +FD   +SR + V +NS+++ Y
Sbjct: 29  GKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGY 88

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
                 ++ + +F +M + GVE   VT++  +  C   G+L  G+ VH    +  L  D 
Sbjct: 89  ALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDS 148

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S+ N L++MY K  ++D    +F ++  K L++WNAMI GYAQNG  N  L  + +M SK
Sbjct: 149 SVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESK 208

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
              PD  T+V V+ + A L  +   K +   +    F  N F+  AL++MYA+CG +  A
Sbjct: 209 GFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKA 268

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           R +FD M  + V +W  +I GYG HG G+ AV LF++M+ G  KP+   F+  +SACSH+
Sbjct: 269 RDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHA 328

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GL  +G+ YF  +++ YG+ P  +HY  MVDLLGRAGRLNEA + I+ M +     ++GA
Sbjct: 329 GLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGA 388

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGACKIH+NVEL E A  ++ EL+P   GY+VLL+N+Y  A   + + +VR +M K+ L
Sbjct: 389 LLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKL 448

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY---TFLETLIDEIKAAGYVPDTNSIHDV 732
           +K PGCS VE K  VH F++G   HPQ+  IY     LE L+ ++         N     
Sbjct: 449 KKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGC----KKNDHERR 504

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           E+Y+  N +  HSEKLA+AF LLN+   + I I KNLR+CGDCH   K +S +  R+ +V
Sbjct: 505 EEYL--NSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVV 562

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD  RFH FKNG CSC +YW
Sbjct: 563 RDATRFHHFKNGFCSCKEYW 582



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           M     +P  + + + +K C  +     GK++H  +   G  L+ F  T +++MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 189 IEEAYKMFDRMPE-RDL-VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           I+ A K+FD  P+ R L V +N++++G+A N   +  + L   M E G   + +T++ ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV 306
                 G+L +G  VHG+ ++ G D   +V   L+ MY K G ++  R +FD M  + ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           +WN+MI  Y + G     + ++++M  +G  P  +T++  L +CA LG L  G  V + +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEAL 426
           +     ++  + N+L++MY++C  + +A DIF  +  K++VSW A+I GY  +G+   A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDM 485
             F +M    IKPD    VSV+ A +   +      +   +  +          + ++D+
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 486 YAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             + G +  AR L + M  R     W  ++     H   + A   F +++E
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIE 411



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 188/355 (52%), Gaps = 4/355 (1%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD--KLDALYHTMLKGYAKFASLD 120
           + K+G   +   QT L+S++ K + + +A ++F+  P   KL   Y+++L GYA  + + 
Sbjct: 36  VFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVK 95

Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           D V     MR   V         L++ CG  G +  G  +HG  +  G  +D      ++
Sbjct: 96  DVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLL 155

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
            MY K G+I+   K+FD MP + L++WN ++ G+AQNG A   L+L   M  +G   D +
Sbjct: 156 TMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPL 215

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T+V +L + A++G+L +GK V       GF S   ++ ALV+MYA+CG ++ AR +FDGM
Sbjct: 216 TLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGM 275

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             ++VVSW ++I  Y   G  E A+ +F +M+  G++P     +  L AC+  G   +G+
Sbjct: 276 PVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGL 335

Query: 361 FVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMI 413
               +++ +  L       + ++ +  +  +++ A ++   +Q +   + W A++
Sbjct: 336 DYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALL 390



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M      P++FT    I + A LS+    K +H  V ++      FV T+LI MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 492 VGTARALFDM--MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           +  AR LFD    + +    +N ++ GY  +   K  V LF +M E   + N +T L  +
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 550 SACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
             C   G +  G  +H F      +G++        ++ +  ++G ++       +MP  
Sbjct: 121 QPCGIPGNLGLGMCVHGFCV---KFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP-R 176

Query: 608 PGITVFGAML 617
            G+  + AM+
Sbjct: 177 KGLITWNAMI 186


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/672 (36%), Positives = 382/672 (56%), Gaps = 46/672 (6%)

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDL-FAMTGVVNMYAKCGQIEEAYKMFDR-M 199
           +LL  C     +R+  EI  Q+I +   S+D        + + +  G +  +  +F+  +
Sbjct: 26  HLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFL 85

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTR--MHEEGRRGDFITIVSILPAVANVGSLRI 257
              ++ ++N ++  F+Q+      +       +       D  T  S+L A A +  +  
Sbjct: 86  SFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLE 145

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH +  + G +S + V  +LVD+Y K G    A+ +FD M  R+VVSWN++I+ Y  
Sbjct: 146 GQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCF 205

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  ++A  +F  M+++ +                                      VS 
Sbjct: 206 SGMVDKARMVFDGMMEKNL--------------------------------------VSW 227

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN- 436
           + ++IS Y++   ++ A  +F  +  + +VSWNAMI GYAQN +  +A+  F +M+ +  
Sbjct: 228 S-TMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGG 286

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           + P+  T+VSV+ A A L  +   KWIH  + R+  E  +F+  AL DMYAKCG V  A+
Sbjct: 287 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 346

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +F  M+ER V +W+++I G   +G    A   F +M+E   +PNDI+F+  ++AC+H+G
Sbjct: 347 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 406

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           LV++G+ YF  + + YGI P ++HYG +VDLL RAGRL++A   I  MP++P + V+GA+
Sbjct: 407 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 466

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           LG C+I+K+ E GE+   R+ ELD +  G  V LAN+YA+    D  A  R  M      
Sbjct: 467 LGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSM 526

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDY 735
           KTPGCS +E+ N V+ F+ G + HPQS RIY+ +  L  ++K AGY P T+  IH++++ 
Sbjct: 527 KTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEE 586

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E+ LS+HSEKLA+AFGL+N+S G+TI I KNLRVC DCH+A K IS +  REI+VRD 
Sbjct: 587 EKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDR 646

Query: 796 HRFHCFKNGVCS 807
            RFH FK+G CS
Sbjct: 647 SRFHHFKDGKCS 658



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 237/490 (48%), Gaps = 53/490 (10%)

Query: 39  YRHPSALLLEVCT--SLKELRRILPLIIKSGL--CDQHLFQTKLVSLFCKYNSLSDAARV 94
           +R    LLL   T  S+++L  I   II S +   D ++   K + +   + +L  +  +
Sbjct: 21  HRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLI 80

Query: 95  FE---PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV--YNYTYLLKVCG 149
           F      P+     Y+ +LK +++  +    +S+         AP    Y +T +LK C 
Sbjct: 81  FNHFLSFPNIF--AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACA 138

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            + ++  G+++H  +   G   +LF    +V++Y K G    A K+FD M  RD+VSWNT
Sbjct: 139 GLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNT 198

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           +++G+  +G  + A  +   M E+                                    
Sbjct: 199 LISGYCFSGMVDKARMVFDGMMEK------------------------------------ 222

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
             ++V+ ST ++  YA+ G +E AR +F+ M  RNVVSWN+MIA Y +     +A+ +F+
Sbjct: 223 --NLVSWST-MISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFR 279

Query: 330 KMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
           +M  + G+ P +VT++  L ACA LG L+ G ++H+ + + K+   + + N+L  MY+KC
Sbjct: 280 QMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC 339

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             V  A  +F ++  + ++SW+ +I+G A  G  NEA N+F +M    ++P+  + + ++
Sbjct: 340 GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLL 399

Query: 449 PALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERH 506
            A     ++ +  ++   +         +     ++D+ ++ G +  A +L + M  + +
Sbjct: 400 TACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN 459

Query: 507 VTTWNVMIDG 516
           V  W  ++ G
Sbjct: 460 VIVWGALLGG 469



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 8/277 (2%)

Query: 63  IIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           ++  G+ +++L   + ++S + +  +L +A ++FE +P +    ++ M+ GYA+     D
Sbjct: 214 MVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYAD 273

Query: 122 AVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           A+    +M+++  +AP       +L  C  +G +  GK IH  +  N   + LF    + 
Sbjct: 274 AIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALA 333

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
           +MYAKCG + EA  +F  M ERD++SW+ I+ G A  G+A  A +    M E+G   + I
Sbjct: 334 DMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDI 393

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRA---GFDSIVNVSTALVDMYAKCGRVETARLVF 297
           + + +L A  + G   + K +  + M     G    +     +VD+ ++ GR++ A  + 
Sbjct: 394 SFMGLLTACTHAG--LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 451

Query: 298 DGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           + M  + NV+ W +++       + E   R+  ++L+
Sbjct: 452 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 488


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/639 (37%), Positives = 361/639 (56%), Gaps = 14/639 (2%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
           F ++++L   A+    I + ++       +GYA  A L        +M+ + + P    +
Sbjct: 10  FNRFSNLWTVAQWNSSITESVN-------QGYAHKALL-----LFRQMKQNGLEPNNLTF 57

Query: 142 TYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE 201
             + K C  +  ++  + +H  ++ + F  DLF  T VV+MY KC Q+  AY +F RMP+
Sbjct: 58  PSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPK 117

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
           RD+ SWN+++ GFAQ GF +  + L   M  EG R D +T++ +  +  ++  L++ +++
Sbjct: 118 RDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESI 177

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGG 319
           H + ++ G D+ V+VS   +  YAKCG    A  VFDG+    +  VSWNSMIA Y    
Sbjct: 178 HSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFE 237

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
              +A+  F+KML  G      TI+  L +C     L  G  +H    Q+   +D+ + N
Sbjct: 238 QCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVIN 297

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +LISMYSKC  +  A  +F  + GKT VSW AMI GYA+ G ++EA+  F  M +   KP
Sbjct: 298 TLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKP 357

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           D  T++S++    +   +   KWI      +  + N+ V  ALID+YAKCG++  AR LF
Sbjct: 358 DLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELF 417

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
             M E+ + +W  +I G   +G  K A+ LF +M+E   KPN ITFL  + AC+H+G +E
Sbjct: 418 YTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLE 477

Query: 560 EGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
           +G   F  + K Y I P +DHY  M DLLGR GRL EA++FIQ MP +P + ++  +L A
Sbjct: 478 KGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537

Query: 620 CKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTP 679
           CKIH+NV +GE  A  LFEL+P     +V +ANIYA+A  WD++A +RT+M+     K+P
Sbjct: 538 CKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSP 597

Query: 680 GCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
           G SLV++  + H F      HP+   IY  LE L  ++K
Sbjct: 598 GKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQMK 636



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 10/243 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S++ K   +  A  +F+ +  K    +  M+ GYA+   LD+A++    M      P 
Sbjct: 299 LISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPD 358

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           +     L+  CG  G +  GK I      NG   +L     ++++YAKCG ++ A ++F 
Sbjct: 359 LVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFY 418

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPE+ LVSW T++AG A NG  + AL L  +M E G + + IT +++L A  + G L  
Sbjct: 419 TMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEK 478

Query: 258 GKAVHG-----YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSM 311
           G          Y +  G D      + + D+  + GR++ A      M  + +V  W+ +
Sbjct: 479 GWECFNLMTKVYKINPGLDHY----SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVL 534

Query: 312 IAA 314
           ++A
Sbjct: 535 LSA 537



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 70/149 (46%), Gaps = 2/149 (1%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           +GL D  +    L+ ++ K  S+ +A  +F  +P+K    + T++ G A      +A+  
Sbjct: 388 NGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGL 447

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVNMYA 184
             +M    + P    +  +L+ C   G + +G E    +  V   +  L   + + ++  
Sbjct: 448 FFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLG 507

Query: 185 KCGQIEEAYKMFDRMPER-DLVSWNTIVA 212
           + G+++EA++    MP + D+  W+ +++
Sbjct: 508 RKGRLKEAFEFIQNMPFKPDVGIWSVLLS 536


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/642 (37%), Positives = 382/642 (59%), Gaps = 16/642 (2%)

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT--RMHEEG 234
           T +++ YA+  ++ EA  +F R+P +D+VSWN+I+ G    G      D+VT  ++ +E 
Sbjct: 90  TIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCG------DIVTARKLFDEM 143

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
            R   ++  +++  +  +G ++  + +  +AM    D  V    A++  Y   GRV+ A 
Sbjct: 144 PRRTVVSWTTLVDGLLRLGIVQEAETLF-WAMEP-MDRDVAAWNAMIHGYCSNGRVDDAL 201

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            +F  M SR+V+SW+SMIA     G  E+A+ +F+ M+  GV  ++  ++  L A A + 
Sbjct: 202 QLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIP 261

Query: 355 DLERGIFVHKLLDQLKLGT---DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
               GI +H      KLG    D  ++ SL++ Y+ CK+++ A  +F ++  K++V W A
Sbjct: 262 AWRVGIQIH--CSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTA 319

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           ++ GY  N +  EAL  F +M   ++ P+  +  S + +   L  I   K IHA  ++  
Sbjct: 320 LLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMG 379

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            E   +V  +L+ MY+KCG V  A  +F  +NE++V +WN +I G   HG G  A+ LFN
Sbjct: 380 LESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFN 439

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +ML     P+ IT    +SACSHSG++++   +F    +   +   ++HY +MVD+LGR 
Sbjct: 440 QMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRC 499

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G L EA   +  MP++    V+ A+L AC+ H N++L ++AAN++FE++PD    +VLL+
Sbjct: 500 GELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLS 559

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           N+YA++S W ++A +R  M+  G+ K PG S + LK + H F S    HP +++IY  LE
Sbjct: 560 NLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLE 619

Query: 712 TLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLR 770
            L  ++K  GYVPD   ++HDVE   +E +LS HSE+LAIAFGLL++  GS I + KNLR
Sbjct: 620 WLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLR 679

Query: 771 VCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           VCGDCHNA K ++ +  REI+VRD  RFH FKNG+CSCGDYW
Sbjct: 680 VCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 48/487 (9%)

Query: 87  SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           SL +A  +F+ IP    +LY  ML  YA+   L +A+    R+ + DV     ++  ++K
Sbjct: 70  SLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVV----SWNSIIK 125

Query: 147 VCGDVGEIRRGKEIHGQL----------IVNGF-------------------SLDLFAMT 177
            C   G+I   +++  ++          +V+G                      D+ A  
Sbjct: 126 GCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWN 185

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
            +++ Y   G++++A ++F +MP RD++SW++++AG   NG +E AL L   M   G   
Sbjct: 186 AMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCL 245

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAG---FDSIVNVSTALVDMYAKCGRVETAR 294
               +V  L A A + + R+G  +H    + G   FD    VS +LV  YA C ++E A 
Sbjct: 246 SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEF--VSASLVTFYAGCKQMEAAC 303

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            VF  +  ++VV W +++  Y       EA+ +F +M+   V P   +   AL++C  L 
Sbjct: 304 RVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLE 363

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
           D+ERG  +H    ++ L +   +  SL+ MYSKC  V  A  +F  +  K +VSWN++I+
Sbjct: 364 DIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIV 423

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           G AQ+G    AL  F +M  + + PD  T+  ++ A +   +++ A+       R   +K
Sbjct: 424 GCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKAR----CFFRYFGQK 479

Query: 475 NVFVM-----TALIDMYAKCGAVGTARA-LFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
               +     T+++D+  +CG +  A A +  M  + +   W  ++     H     A  
Sbjct: 480 RSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKR 539

Query: 529 LFNKMLE 535
             N++ E
Sbjct: 540 AANQIFE 546



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 4/263 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+ +     +  A RVF  +  K   ++  +L GY       +A+     M   DV P 
Sbjct: 289 LVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPN 348

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T  L  C  + +I RGK IH   +  G     +    +V MY+KCG + +A  +F 
Sbjct: 349 ESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFK 408

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            + E+++VSWN+++ G AQ+G    AL L  +M  EG   D IT+  +L A ++ G L+ 
Sbjct: 409 GINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQK 468

Query: 258 GKAVHGY-AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAY 315
            +    Y   +      +   T++VD+  +CG +E A  V   M  + N + W ++++A 
Sbjct: 469 ARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSAC 528

Query: 316 VEGGNPEEAMRIFQKMLDQGVEP 338
            +  N + A R   ++ +  +EP
Sbjct: 529 RKHSNLDLAKRAANQIFE--IEP 549



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           + +D A  IF ++    +  +  M+  YAQN R+ EA++ F ++  K    D  +  S+I
Sbjct: 69  RSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFK----DVVSWNSII 124

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN--ERH 506
                   I  A+ +   + R    + V   T L+D   + G V  A  LF  M   +R 
Sbjct: 125 KGCLHCGDIVTARKLFDEMPR----RTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           V  WN MI GY ++G    A++LF +M   P++ + I++   I+   H+G  E+ +  F 
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQM---PSR-DVISWSSMIAGLDHNGKSEQALVLFR 236

Query: 567 SL 568
            +
Sbjct: 237 DM 238



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 47  LEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  C  L+++ R   I    +K GL         LV ++ K   +SDA  VF+ I +K  
Sbjct: 356 LNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNV 415

Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK---EI 160
             +++++ G A+      A++   +M  + V P     T LL  C   G +++ +     
Sbjct: 416 VSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRY 475

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
            GQ      +L +   T +V++  +CG++EEA  +   MP
Sbjct: 476 FGQ--KRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMP 513


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/535 (41%), Positives = 325/535 (60%), Gaps = 43/535 (8%)

Query: 283 MYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLDQGVEP 338
           MYAKC   G V+ +R VF+ M   NV+SW ++I AYV+ G   +EA+ +F KM+   V  
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
                                                 + NSLISMY++  +++ A   F
Sbjct: 60  -------------------------------------CVGNSLISMYARSGRMEDARKAF 82

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             L  K LVS+NA++ GYA+N +  EA   F ++    I   +FT  S++   A +  + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             + IH  +++  ++ N  +  ALI MY++CG +  A  +F+ M +R+V +W  MI G+ 
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            HG    A+E+F+KMLE  TKPN+IT++  +SACSH G++ EG  +F S+ K++GI P M
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +HY  MVDLLGR+G L EA +FI  MP+     V+  +LGAC++H N ELG  AA  + E
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
            +PD+   ++LL+N++A+A  W  + K+R  M+++ L K  GCS +E++N VH F+ G T
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HPQ+ +IY  L+ L  +IK  GY+PDT+ + HD+E+  +E  L  HSEK+A+AFGL+++
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S    I I KNLRVCGDCH A KYIS+ TGREI+VRD +RFH  KNGVCSC DYW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 177/386 (45%), Gaps = 75/386 (19%)

Query: 182 MYAKC---GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL-ALDLVTRMHEEGRRG 237
           MYAKC   G ++++ K+F++MPE +++SW  I+  + Q+G  +  A++L  +M       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
                  I  +V  VG+                        +L+ MYA+ GR+E AR  F
Sbjct: 54  -------ISASVNCVGN------------------------SLISMYARSGRMEDARKAF 82

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           D +  +N+VS+N+++  Y +    EEA  +F ++ D G+  +  T    L   A +G + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
           +G  +H  L +    ++  + N+LISMYS+C  ++ A  +F++++ + ++SW +MI G+A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           ++G    AL  F KM     KP+  T V+V+ A + + +I   +                
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ---------------- 246

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
                  MY + G V              +  +  M+D  G  GL   A+E  N M   P
Sbjct: 247 --KHFNSMYKEHGIV------------PRMEHYACMVDLLGRSGLLVEAMEFINSM---P 289

Query: 538 TKPNDITFLCAISACSHSGLVEEGIH 563
              + + +   + AC   G  E G H
Sbjct: 290 LMADALVWRTLLGACRVHGNTELGRH 315



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 111/181 (61%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           +++MYA+ G++E+A K FD + E++LVS+N IV G+A+N  +E A  L   + + G    
Sbjct: 65  LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 124

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T  S+L   A++G++  G+ +HG  ++ G+ S   +  AL+ MY++CG +E A  VF+
Sbjct: 125 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 184

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M+ RNV+SW SMI  + + G    A+ +F KML+ G +P  +T +  L AC+ +G +  
Sbjct: 185 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 244

Query: 359 G 359
           G
Sbjct: 245 G 245



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 154/310 (49%), Gaps = 17/310 (5%)

Query: 59  ILPLIIKSGLCDQHLFQ--------------TKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           I+   ++SG CD+   +                L+S++ +   + DA + F+ + +K   
Sbjct: 32  IITAYVQSGECDKEAIELFCKMISASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 91

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
            Y+ ++ GYAK    ++A      +    +    + +  LL     +G + +G++IHG+L
Sbjct: 92  SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 151

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
           +  G+  +      +++MY++CG IE A+++F+ M +R+++SW +++ GFA++GFA  AL
Sbjct: 152 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 211

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDM 283
           ++  +M E G + + IT V++L A ++VG +  G K  +      G    +     +VD+
Sbjct: 212 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 271

Query: 284 YAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV-EPTNV 341
             + G +  A    + M    + + W +++ A    GN E      + +L+Q   +P   
Sbjct: 272 LGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAY 331

Query: 342 TIMEALHACA 351
            ++  LHA A
Sbjct: 332 ILLSNLHASA 341


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/701 (33%), Positives = 389/701 (55%), Gaps = 5/701 (0%)

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
           AK  +L +   F+  M    ++    +Y YL K+CG +G +  GK  H +L     S + 
Sbjct: 68  AKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANS-NK 126

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F    ++ MY  C     A + FD++ ++DL SW+TI++ + + G  + A+ L  RM + 
Sbjct: 127 FIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDL 186

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   +     +++ +  +   L +GK +H   +R GF + +++ T + +MY KCG ++ A
Sbjct: 187 GITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGA 246

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
            +  + M  +N V+   ++  Y +     +A+ +F KM+ +GVE         L ACA L
Sbjct: 247 EVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAAL 306

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           GDL  G  +H    +L L ++VS+   L+  Y KC + + A   F  +      SW+A+I
Sbjct: 307 GDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALI 366

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            GY Q+G+ + AL  F  +RSK +  +SF   ++  A + +S +     IHA  I+    
Sbjct: 367 AGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLV 426

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             +   +A+I MY+KCG V  A   F  +++     W  +I  +  HG    A+ LF +M
Sbjct: 427 AYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM 486

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
                +PN +TF+  ++ACSHSGLV+EG     S+  +YG+ P +DHY  M+D+  RAG 
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGL 546

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
           L EA + I+ +P EP +  + ++LG C  H+N+E+G  AA+ +F LDP +   +V++ N+
Sbjct: 547 LQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNL 606

Query: 654 YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
           YA A  WD+ A+ R +M ++ L+K   CS + +K +VH F  G   HPQ+++IY+ L+ L
Sbjct: 607 YALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 666

Query: 714 IDEIKAAG--YVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
               K +    + + N++ D  +  +E LL  HSE+LAIA+GL+ ++  + I + KN R 
Sbjct: 667 NFSFKKSKERLLNEENALCDFTER-KEQLL-DHSERLAIAYGLICTAADTPIMVFKNTRS 724

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           C DCH+  K +S+VTGRE++VRD +RFH   +G CSC DYW
Sbjct: 725 CKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 256/529 (48%), Gaps = 39/529 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++ ++C   S + A R F+ I D+  + + T++  Y +   +D+AV   +RM    + P 
Sbjct: 132 ILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPN 191

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              ++ L+    D   +  GK+IH QLI  GF+ ++   T + NMY KCG ++ A    +
Sbjct: 192 SSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATN 251

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M  ++ V+   ++ G+ +      AL L  +M  EG   D      IL A A +G L  
Sbjct: 252 KMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYT 311

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H Y ++ G +S V+V T LVD Y KC R E AR  F+ +   N  SW+++IA Y +
Sbjct: 312 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 371

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  + A+ +F+ +  +GV   +        AC+ + DL  G  +H    +  L   +S 
Sbjct: 372 SGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 431

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +++ISMYSKC +VD A   F  +     V+W A+I  +A +G+  EAL  F +M+   +
Sbjct: 432 ESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGV 491

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P++ T + ++ A +   +++  K I               + ++ D Y   G   T   
Sbjct: 492 RPNAVTFIGLLNACSHSGLVKEGKKI---------------LDSMSDEY---GVNPT--- 530

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC-SHSG 556
                    +  +N MID Y   GL + A+E+   +   P +P+ +++   +  C SH  
Sbjct: 531 ---------IDHYNCMIDVYSRAGLLQEALEVIRSL---PFEPDVMSWKSLLGGCWSHRN 578

Query: 557 LVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNEAWDFIQKM 604
           L E G+    +    + ++P+    Y  M +L   AG+ +EA  F + M
Sbjct: 579 L-EIGM---IAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMM 623



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 14/344 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           +++L+ C +L +L   ++I    IK GL  +    T LV  + K      A + FE I +
Sbjct: 297 SIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHE 356

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
             D  +  ++ GY +    D A+     +R   V    + YT + + C  V ++  G +I
Sbjct: 357 PNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQI 416

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   I  G    L   + +++MY+KCGQ++ A++ F  + + D V+W  I+   A +G A
Sbjct: 417 HADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKA 476

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTA 279
             AL L   M   G R + +T + +L A ++ G ++ GK +    +   G +  ++    
Sbjct: 477 FEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNC 536

Query: 280 LVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAM----RIFQKMLDQ 334
           ++D+Y++ G ++ A  V   +    +V+SW S++       N E  M     IF+  LD 
Sbjct: 537 MIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFR--LDP 594

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            ++     IM  L+A A  G  +      K++ +  L  +VS +
Sbjct: 595 -LDSATYVIMFNLYALA--GKWDEAAQFRKMMAERNLRKEVSCS 635


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 346/581 (59%), Gaps = 14/581 (2%)

Query: 241 TIVSILPAVANVGSLRIGKAVH-----GYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
            + S++ AV +  S+ + + +H       + R GF     +   LV  Y + G    A  
Sbjct: 33  NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEK 87

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADL 353
           +FD M  R++VSWNS+I+ Y   G   +   +  +M+  + G  P  VT +  + AC   
Sbjct: 88  LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
           G  E G  +H L+ +  +  +V + N+ I+ Y K   +  +  +F  L  K LVSWN MI
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
           + + QNG   + L YF   R    +PD  T ++V+ +  ++ V+R A+ IH L++   F 
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            N  + TAL+D+Y+K G +  +  +F  +       W  M+  Y THG G+ A++ F  M
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
           +     P+ +TF   ++ACSHSGLVEEG HYF ++ K Y I+P +DHY  MVDLLGR+G 
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387

Query: 594 LNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANI 653
           L +A+  I++MP+EP   V+GA+LGAC+++K+ +LG KAA RLFEL+P +G  +V+L+NI
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNI 447

Query: 654 YAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
           Y+A+ +W   +++R +M++KGL +  GCS +E  N++H F  G   HP+S++I   L+ +
Sbjct: 448 YSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 507

Query: 714 IDEIKAA-GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
             ++K+  GY   T  + HDV + V+E +++ HSEK+A+AFGLL  SP   I IRKNLR+
Sbjct: 508 RKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 567

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           CGDCH   K ISL+  R II+RD  RFH F +G CSC DYW
Sbjct: 568 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 12/419 (2%)

Query: 125 FLIRMRYDDVAPVVY----NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
           FL R R+   +  V+    N + L+        I   + +H +++ +      F    +V
Sbjct: 14  FLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV 73

Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGD 238
             Y + G    A K+FD MPERDLVSWN++++G++  G+     ++++RM   E G R +
Sbjct: 74  GCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPN 133

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
            +T +S++ A    GS   G+ +HG  M+ G    V V  A ++ Y K G + ++  +F+
Sbjct: 134 EVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            +  +N+VSWN+MI  +++ G  E+ +  F      G EP   T +  L +C D+G +  
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
              +H L+       +  +T +L+ +YSK  +++ ++ +F ++     ++W AM+  YA 
Sbjct: 254 AQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYAT 313

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVF 477
           +G   +A+ +F  M    I PD  T   ++ A +   ++   K +   +  R   +  + 
Sbjct: 314 HGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLD 373

Query: 478 VMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDG---YGTHGLG-KAAVELFN 531
             + ++D+  + G +  A  L  +M  E     W  ++     Y    LG KAA  LF 
Sbjct: 374 HYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE 432



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 172/336 (51%), Gaps = 5/336 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEV--CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           LSQ +++ S +  + S+L+  V  C S++  R +   ++KS          +LV  + + 
Sbjct: 21  LSQSSFVHS-LDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA--PVVYNYTY 143
                A ++F+ +P++    +++++ GY+    L      L RM   +V   P    +  
Sbjct: 80  GHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS 139

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           ++  C   G    G+ IHG ++  G   ++  +   +N Y K G +  + K+F+ +  ++
Sbjct: 140 MISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKN 199

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSWNT++    QNG AE  L         G   D  T +++L +  ++G +R+ + +HG
Sbjct: 200 LVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG 259

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
             M  GF     ++TAL+D+Y+K GR+E +  VF  + S + ++W +M+AAY   G   +
Sbjct: 260 LIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD 319

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           A++ F+ M+  G+ P +VT    L+AC+  G +E G
Sbjct: 320 AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           S +E R I  L++K G+ ++       ++ + K   L+ + ++FE +  K    ++TM+ 
Sbjct: 149 SKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIV 208

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            + +    +  +++    R     P    +  +L+ C D+G +R  + IHG ++  GFS 
Sbjct: 209 IHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSG 268

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           +    T ++++Y+K G++E++  +F  +   D ++W  ++A +A +GF   A+     M 
Sbjct: 269 NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV 328

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             G   D +T   +L A ++ G +  GK      + R   D  ++  + +VD+  + G +
Sbjct: 329 HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLL 388

Query: 291 ETA 293
           + A
Sbjct: 389 QDA 391


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/564 (40%), Positives = 341/564 (60%), Gaps = 9/564 (1%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK VHG   + GFD I  V  +++DMY+KCG V  A  VF+ +  RNV+SWN+MIA Y  
Sbjct: 23  GKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTN 82

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ--LKLGTDV 375
             N EEA+ +F++M ++G  P   T   +L AC+       G+ +H  L +         
Sbjct: 83  ERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQS 142

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           ++  +L+ +Y KC+++  A  +F +++ K+++SW+ +ILGYAQ   + EA++ F ++R  
Sbjct: 143 AVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRES 202

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK-NVFVMTALIDMYAKCGAVGT 494
             + D F + S+I   A+ +++   K +HA  I+  +    + V  +++DMY KCG    
Sbjct: 203 RHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVE 262

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A ALF  M ER+V +W VMI GYG HG+G  AVELFN+M E   +P+ +T+L  +SACSH
Sbjct: 263 ADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSH 322

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           SGL++EG  YF+ L  +  I+P ++HY  MVDLLGR GRL EA + I+KMP++P + ++ 
Sbjct: 323 SGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQ 382

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
            +L  C++H +VE+G++    L   + +    +V+++N+YA A  W +  K+R  +++KG
Sbjct: 383 TLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKG 442

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA-GYVPDTN-SIHDV 732
           L+K  G S VE+  E+H FY+G   HP  + I+  L+ +   +K   GYV   N S+HDV
Sbjct: 443 LKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDV 502

Query: 733 EDYVQENLLSSHSEKLAIAFGL----LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGR 788
           E+  +   L  HSEKLAI   L    L       I I KNLRVCGDCH   K +S V   
Sbjct: 503 EEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKI 562

Query: 789 EIIVRDMHRFHCFKNGVCSCGDYW 812
             +VRD +RFH F+NG+CSCGDYW
Sbjct: 563 AFVVRDANRFHRFENGLCSCGDYW 586



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 223/435 (51%), Gaps = 12/435 (2%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +L  C     + +GK++HG +   GF +       +++MY+KCG + EA ++F+ +P R+
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           ++SWN ++AG+      E AL+L   M E+G   D  T  S L A +   +   G  +H 
Sbjct: 70  VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129

Query: 264 YAMRAGFDSIVN--VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNP 321
             +R GF  +    V+ ALVD+Y KC R+  AR VFD ++ ++V+SW+++I  Y +  N 
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG-TDVSMTNS 380
           +EAM +F+++ +         +   +   AD   LE+G  +H    ++  G  ++S+ NS
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           ++ MY KC     A  +F ++  + +VSW  MI GY ++G  N+A+  F +M+   I+PD
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309

Query: 441 SFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           S T ++V+ A +   +I+   K+   L      +  V     ++D+  + G +  A+ L 
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369

Query: 500 DMMNER-HVTTWNVMIDGYGTHG---LGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
           + M  + +V  W  ++     HG   +GK   E+  +  EG    N   ++   +  +H+
Sbjct: 370 EKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRR-EGNNPAN---YVMVSNMYAHA 425

Query: 556 GLVEEGIHYFTSLKK 570
           G  +E      +LK+
Sbjct: 426 GYWKESEKIRETLKR 440



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 196/386 (50%), Gaps = 16/386 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++ ++ K   + +AARVF  +P +    ++ M+ GY    + ++A++    MR     P 
Sbjct: 45  MIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPD 104

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS-LDLFAMTG-VVNMYAKCGQIEEAYKM 195
            Y Y+  LK C        G +IH  LI +GF  L   A+ G +V++Y KC ++ EA K+
Sbjct: 105 GYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKV 164

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           FDR+ E+ ++SW+T++ G+AQ    + A+DL   + E   R D   + SI+   A+   L
Sbjct: 165 FDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALL 224

Query: 256 RIGKAVHGYAMRAGFDSI-VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
             GK +H Y ++  +  + ++V+ +++DMY KCG    A  +F  M  RNVVSW  MI  
Sbjct: 225 EQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITG 284

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGT 373
           Y + G   +A+ +F +M + G+EP +VT +  L AC+  G ++ G  +   L    K+  
Sbjct: 285 YGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKP 344

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNG------RVNEAL 426
            V     ++ +  +  ++  A ++  K+  K  V  W  ++     +G      +V E L
Sbjct: 345 KVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEIL 404

Query: 427 NYFCKMRSKNIKPDSFTMVSVIPALA 452
                +R +   P ++ MVS + A A
Sbjct: 405 -----LRREGNNPANYVMVSNMYAHA 425



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 5/161 (3%)

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +S  +  ++   ++  ++   K +H +V +  F+    V  ++IDMY+KCG VG A  +F
Sbjct: 3   ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVF 62

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           + +  R+V +WN MI GY     G+ A+ LF +M E    P+  T+  ++ ACS +    
Sbjct: 63  NTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG 122

Query: 560 EGIHYFTSLKKDYGIEPVMDHY---GAMVDLLGRAGRLNEA 597
           EG+    +L + +G  P +      GA+VDL  +  R+ EA
Sbjct: 123 EGMQIHAALIR-HGF-PYLAQSAVAGALVDLYVKCRRMAEA 161


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/489 (43%), Positives = 311/489 (63%), Gaps = 3/489 (0%)

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           ++ +ML + V P   T    + AC     +E G  +H  + +   G D    N+LI MY 
Sbjct: 81  MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYV 140

Query: 387 KCKKVDRAADIFSKL--QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
             + +++A  +F  +  + +  VSWNAMI  Y Q+ R++EA   F +MR +N+  D F  
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 200

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            S++ A   L  +   KWIH  + +S  E +  + T +IDMY KCG +  A  +F+ + +
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 260

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           + +++WN MI G   HG G+AA+ELF +M      P+ ITF+  +SAC+HSGLVEEG HY
Sbjct: 261 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 320

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  + +  G++P M+H+G MVDLLGRAG L EA   I +MP+ P   V GA++GAC+IH 
Sbjct: 321 FQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 380

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           N ELGE+   ++ EL+P   G +VLLAN+YA+A  W+ +AKVR +M  +G++K PG S++
Sbjct: 381 NTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMI 440

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSS 743
           E ++ V  F +G   HPQ+K IY  L+ +++ I++ GYVPDT+ + HD+++  +EN L  
Sbjct: 441 ESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYY 500

Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
           HSEKLAIAFGLL + PG T+ I KNLR+C DCH A+K IS V  REII+RD +RFH F+ 
Sbjct: 501 HSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRM 560

Query: 804 GVCSCGDYW 812
           G CSC DYW
Sbjct: 561 GGCSCKDYW 569



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 26/315 (8%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           L+ C+++ EL++    II+ GL   +    +++  FC  +                    
Sbjct: 27  LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIK-FCAISK------------------- 66

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
                GY ++    + +    RM +  V+P  + Y  L++ C     I  GK+IH  ++ 
Sbjct: 67  ----SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLK 122

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL--VSWNTIVAGFAQNGFAELAL 224
            GF  D F++  +++MY     +E+A ++FD MP+RD   VSWN ++A + Q+     A 
Sbjct: 123 FGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAF 182

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
            L  RM  E    D     S+L A   +G+L  GK +HGY  ++G +    ++T ++DMY
Sbjct: 183 ALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMY 242

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            KCG +E A  VF+ +  + + SWN MI      G  E A+ +F++M  + V P  +T +
Sbjct: 243 CKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFV 302

Query: 345 EALHACADLGDLERG 359
             L ACA  G +E G
Sbjct: 303 NVLSACAHSGLVEEG 317



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 30/363 (8%)

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
           Y L  C  + E+   K+ H Q+I  G S D  AM  V+     C   +  Y         
Sbjct: 25  YGLDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKF---CAISKSGY--------- 69

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
             + W            A   + + +RM  +    +  T   ++ A     ++  GK +H
Sbjct: 70  --LRWQ----------LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 117

Query: 263 GYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIAAYVEGGN 320
            + ++ GF +       L+ MY     +E AR VFD M  + RN VSWN+MIAAYV+   
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNR 177

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA  +F +M  + V          L AC  LG LE+G ++H  +++  +  D  +  +
Sbjct: 178 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT 237

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           +I MY KC  +++A+++F++L  K + SWN MI G A +G+   A+  F +M  + + PD
Sbjct: 238 VIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPD 297

Query: 441 SFTMVSVIPALAELSVIRYAK-WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
             T V+V+ A A   ++   K +   +      +  +     ++D+  + G +  AR L 
Sbjct: 298 GITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLI 357

Query: 500 DMM 502
           + M
Sbjct: 358 NEM 360



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 167/338 (49%), Gaps = 13/338 (3%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP--DKLDALYHTM 109
           +++E ++I   ++K G          L+ ++  + SL  A RVF+ +P  D+    ++ M
Sbjct: 109 AIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAM 168

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +  Y +   L +A +   RMR ++V    +    +L  C  +G + +GK IHG +  +G 
Sbjct: 169 IAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGI 228

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            LD    T V++MY KCG +E+A ++F+ +P++ + SWN ++ G A +G  E A++L   
Sbjct: 229 ELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKE 288

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCG 288
           M  E    D IT V++L A A+ G +  GK    Y     G    +     +VD+  + G
Sbjct: 289 MEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAG 348

Query: 289 RVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN---VTIM 344
            +E AR + + M  + +     +++ A    GN E   +I +K+++  +EP N     ++
Sbjct: 349 LLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIE--LEPHNSGRYVLL 406

Query: 345 EALHACADLGDLERGIFVHKLLDQ--LKLGTDVSMTNS 380
             L+A A  G  E    V KL++   +K     SM  S
Sbjct: 407 ANLYASA--GRWEDVAKVRKLMNDRGVKKAPGFSMIES 442



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 8/226 (3%)

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           GY +       +  + +M  K++ P+ FT   +I A      I   K IHA V++  F  
Sbjct: 68  GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           + F +  LI MY    ++  AR +FD M   +R+  +WN MI  Y        A  LF++
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187

Query: 533 MLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAG 592
           M       +       +SAC+  G +E+G      ++K  GIE        ++D+  + G
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCG 246

Query: 593 RLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            L +A +   ++P + GI+ +  M+G   +H   E    AA  LF+
Sbjct: 247 CLEKASEVFNELP-QKGISSWNCMIGGLAMHGKGE----AAIELFK 287


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/717 (33%), Positives = 392/717 (54%), Gaps = 19/717 (2%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELRRI-------LPLIIKSGLCDQHLFQTKLVS 80
           LS RA +  R++  P+    E C  L+ L R        +  I ++ L + +    +LV 
Sbjct: 4   LSIRA-LGRRLFTAPAVASTE-CIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELV- 60

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD---VAPV 137
              K   L +A R+F+ +  K +  + T++ GY       +A+     MR +    + P 
Sbjct: 61  ---KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPF 117

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           + +  +  K CG   ++  G+ +HG  +  G    +F  + +++MY K G+I E  ++F 
Sbjct: 118 ILSLAH--KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH 175

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP R++VSW  I+ G  + G+ + AL   + M       D  T    L A A+ G+L  
Sbjct: 176 EMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNY 235

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H  AM+ GFD    V+  L  MY KCG++E    +F+ M  R+VVSW ++I   V+
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  E A++ F +M +  V P   T    +  CA+L  +E G  +H L+  L L   +S+
Sbjct: 296 MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSV 355

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            NS+++MY+KC ++  ++ IF ++  + +VSW+ +I GY+Q G V+EA      MR +  
Sbjct: 356 ENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGP 415

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KP  F + SV+ A   ++++ + K +HA V+    E    V++ALI+MY KCG++  A  
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +FD      + +W  MI+GY  HG  +  ++LF K+     +P+ +TF+  +SACSH+GL
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           V+ G  YF ++ K Y I P  +HYG M+DLL RAGRL++A   I+ MP      V+  +L
Sbjct: 536 VDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            AC++H +VE G + A R+ +L+P+  G H+ LANIYA+   W + A +R +M+ KG+ K
Sbjct: 596 RACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIK 655

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE 733
            PG S +++K+ V +F +G   HPQ + IY  L+ L    + A  V +T  + +D+E
Sbjct: 656 EPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/612 (34%), Positives = 370/612 (60%), Gaps = 4/612 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           ++T+LK  ++    +  +    +M  D+  P  +     LK CG++ E++ G+ IHG L 
Sbjct: 9   WNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLK 68

Query: 166 VN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
            N     DL+  + ++ MY KCG++ EA +MF+ + + D+V+W+++V+GF +NG    A+
Sbjct: 69  KNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAV 128

Query: 225 DLVTRMHEEGR-RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           +   RM        D +T+++++ A   + + R+G+ VHG+ MR GF + +++  +L++ 
Sbjct: 129 EFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNC 188

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YAK    + A  +F  M  ++V+SW+++IA YV+ G   EA+R+F +M+D G EP   T+
Sbjct: 189 YAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATV 248

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  L ACA   DLE+G   H+L  +  L T+V ++ +L+ MY KC   + A  +FS++  
Sbjct: 249 LCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPK 308

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKW 462
           K +VSW A+I G+  NG  + ++  F  M    N +PD+  M+ V+ + +EL  ++ A+ 
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAEC 368

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H+ VI+  F+ N F+  +L+++Y++CG++G A  +F+ +  +    W  +I GYG HG 
Sbjct: 369 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGK 428

Query: 523 GKAAVELFNKMLEGP-TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
           G  A+E FN M+     KPN++TFL  +SACSH+GL+ EG+  F  +  DY + P ++HY
Sbjct: 429 GTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHY 488

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VDLLGR G L+ A +  ++MP  P   + G +LGAC+IH+N E+ E  A +LFEL+ 
Sbjct: 489 AVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELES 548

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
           +  GY++L++N+Y     W+ + K+R  ++++G++K    SL+E++ +VH F +    HP
Sbjct: 549 NHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHP 608

Query: 702 QSKRIYTFLETL 713
           + + +Y  L+ L
Sbjct: 609 EKEPVYGLLKEL 620



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 172/308 (55%), Gaps = 3/308 (0%)

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  R +  WN+++ +     + E+ M  F +M     +P N T+  AL AC +L +++ G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 360 IFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
             +H  L + + LG+D+ + +SLI MY KC ++  A  +F++L+   +V+W++M+ G+ +
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 419 NGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           NG   +A+ +F +M  + ++ PD  T+++++ A  +LS  R  + +H  V+R  F  ++ 
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
           ++ +L++ YAK  A   A  LF MM E+ V +W+ +I  Y  +G    A+ +FN+M++  
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           T+PN  T LC + AC+ +  +E+G      L    G+E  +    A+VD+  +     EA
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQG-RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299

Query: 598 WDFIQKMP 605
           +    ++P
Sbjct: 300 YAVFSRIP 307



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 201/422 (47%), Gaps = 12/422 (2%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCD 70
           N +P Q +   +   +     P R+       L+  CT L   R    +   +++ G  +
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRV---TLITLVSACTKLSNSRLGRCVHGFVMRRGFSN 177

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
                  L++ + K  +  +A  +F+ + +K    + T++  Y +  +  +A+     M 
Sbjct: 178 DLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMI 237

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
            D   P V     +L+ C    ++ +G++ H   I  G   ++   T +V+MY KC   E
Sbjct: 238 DDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAV 249
           EAY +F R+P++D+VSW  +++GF  NG A  +++  + M  E   R D I ++ +L + 
Sbjct: 298 EAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSC 357

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + +G L+  +  H Y ++ GFDS   +  +LV++Y++CG +  A  VF+ +  ++ V W 
Sbjct: 358 SELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWT 417

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLL-D 367
           S+I  Y   G   +A+  F  M+    V+P  VT +  L AC+  G +  G+ + +L+ +
Sbjct: 418 SLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVN 477

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA---QNGRVNE 424
             +L  ++     L+ +  +  ++D A +I  ++           +LG     QNG + E
Sbjct: 478 DYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAE 537

Query: 425 AL 426
            +
Sbjct: 538 TV 539


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/698 (33%), Positives = 393/698 (56%), Gaps = 10/698 (1%)

Query: 40  RHPSALLL----EVCTSLKELRRILPL---IIKSGLCDQHLF-QTKLVSLFCKYNSLSDA 91
            HP+  +L      CT L  + +   L   +++SG  DQ ++  T L+  + K   +  A
Sbjct: 33  EHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF-DQDVYVGTSLIDFYSKNGBIEVA 91

Query: 92  ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
             VF+ + +K    + T++ GY K      ++    +MR  +V P  Y  + +L  C  +
Sbjct: 92  RLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSML 151

Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
             +  GK+IH  ++  G  +D+  +  +++ Y KC +++   K+FD+M  ++++SW T++
Sbjct: 152 EFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMI 211

Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
           +G+ QN F   A+ L   M+  G + D     S+L +  ++ +L  G+ VH Y ++A  +
Sbjct: 212 SGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLE 271

Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           S   V   L+DMYAK   +  A+ VFD M  +NV+S+N+MI  Y       EA+ +F +M
Sbjct: 272 SNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 331

Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
             +   P+ +T +  L   A L  LE    +H L+ +  +  D+   ++LI +YSKC  V
Sbjct: 332 RVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYV 391

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
             A  +F ++  K +V WNAM  GY Q+    EAL  +  ++    KP+ FT  ++I A 
Sbjct: 392 KDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAA 451

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           + L+ +R+ +  H  +++   +   FV  AL+DMYAKCG++  AR +F+    R V  WN
Sbjct: 452 SNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWN 511

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI  +  HG  + A+ +F +M++   +PN +TF+  +SACSH+G VE+G+++F S+   
Sbjct: 512 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PG 570

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           +GI+P  +HY  +V LLGR+G+L EA +FI+KMPIEP   V+ ++L AC+I  NVELG+ 
Sbjct: 571 FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKY 630

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
           AA      DP + G ++LL+NI+A+  MW  + KVR  M+   + K PG S +E+ N+V+
Sbjct: 631 AAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVN 690

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
            F +  T H ++  I + L+ LI  IK AGYVPD  ++
Sbjct: 691 VFIARXTTHREADMIGSVLDILIQHIKGAGYVPDATAL 728



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 213/405 (52%), Gaps = 11/405 (2%)

Query: 218 GFAELALDLVTRMHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           G++E AL +   +  + G   +   + S++ A   +G +  G  +HG+ +R+GFD  V V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            T+L+D Y+K G +E ARLVFD +  +  V+W ++IA Y + G    ++ +F +M +  V
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRA 394
            P    +   L AC+ L  LE G  +H  +  L+ GT  DVS+ N LI  Y+KC +V   
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYV--LRRGTEMDVSVVNVLIDFYTKCNRVKAG 192

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
             +F ++  K ++SW  MI GY QN    EA+  F +M     KPD F   SV+ +   L
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
             +   + +HA  I++  E N FV   LIDMYAK   +  A+ +FD+M E++V ++N MI
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITF--LCAISACSHSGLVEEGIHYFTSLKKDY 572
           +GY +      A+ELF++M      P+ +TF  L  +SA   +  + + IH    L    
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIH---GLIIKX 369

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           G+   +    A++D+  +   + +A    ++M  E  I V+ AM 
Sbjct: 370 GVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMF 413



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 157/326 (48%), Gaps = 11/326 (3%)

Query: 319 GNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
           G  EEA+ +F  +  + G  P    +   + AC  LG +E+G  +H  + +     DV +
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             SLI  YSK   ++ A  +F +L  KT V+W  +I GY + GR   +L  F +MR  N+
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
            PD + + SV+ A + L  +   K IHA V+R   E +V V+  LID Y KC  V   R 
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           LFD M  +++ +W  MI GY  +     A++LF +M     KP+       +++C     
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254

Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +E+G  +H +T        E V +    ++D+  ++  L +A      M  E  +  + A
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKN---GLIDMYAKSNLLXDAKKVFDVMA-EQNVISYNA 310

Query: 616 MLGAC----KIHKNVELGEKAANRLF 637
           M+       K+ + +EL  +   RLF
Sbjct: 311 MIEGYSSQEKLSEALELFHEMRVRLF 336


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/537 (41%), Positives = 323/537 (60%), Gaps = 54/537 (10%)

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
           K+ D  + P  V+++  L ACA +G    G  VH +  +     D+ + N+L+ MY+KC 
Sbjct: 3   KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI------------ 437
            VD A+ +F +++ K +VSWNAM+ GY+Q GR  +AL  F KMR +NI            
Sbjct: 63  MVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIA 122

Query: 438 ----------------------------------------KPDSFTMVSVIPALAELSVI 457
                                                   KP+ FT+   + A A L+ +
Sbjct: 123 AFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAAL 182

Query: 458 RYAKWIHALVIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
           R  + IHA ++R+ F+   ++V   LIDMYAK G +  AR +FD + +++  +W  ++ G
Sbjct: 183 RLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTG 242

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           YG HG GK A+E+F++M     +P+ +T L  + ACSHSG++++GI +F S+ K++G+ P
Sbjct: 243 YGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIP 302

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
             +HY  MVDLLGRAGRLNEA + I+ M +EP   V+ A+L  C+IH NVELGE AA +L
Sbjct: 303 GQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQL 362

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            EL+ +  G + LL+NIYA A  W  +A+VR++M+  G++K PGCS V+ K    +FY  
Sbjct: 363 LELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVA 422

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLL 755
              HPQSK+IY  L +L   IK  GYVP+T+ ++HDV+D  + +LL  HSEKLA+A+G+L
Sbjct: 423 DKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGIL 482

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            S+PG+ I I KNLRVCGDCHNA  YIS++   EII+RD  RFH FK G CSC  YW
Sbjct: 483 ISAPGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 186/378 (49%), Gaps = 60/378 (15%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           D+ P V +   +L  C  +G    GK +HG  + +G   DLF    +V+MYAKCG ++EA
Sbjct: 8   DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE----------------GRR 236
            K+FDR+ E+D+VSWN +V G++Q G  E AL L  +M EE                 +R
Sbjct: 68  SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127

Query: 237 G------------------------------------DFITIVSILPAVANVGSLRIGKA 260
           G                                    +  TI   L A A + +LR+G+ 
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187

Query: 261 VHGYAMRAGFDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
           +H Y +R  FDS  + V+  L+DMYAK G ++ AR VFD +K +N VSW S++  Y   G
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHG 247

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMT 378
             +EA+ +F +M   G++P  VT++  L+AC+  G +++GI F + +  +  +       
Sbjct: 248 RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHY 307

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRV---NEALNYFCKMRS 434
             ++ +  +  +++ A ++   +Q + + + W A++ G   +  V     A     ++ S
Sbjct: 308 ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367

Query: 435 KNIKPDSFTMVSVIPALA 452
           +N    S+T++S I A A
Sbjct: 368 EN--DGSYTLLSNIYANA 383



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 163/354 (46%), Gaps = 69/354 (19%)

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           R D +++V++LPA A++G+   GKAVHG A+R+G    + V  ALVDMYAKCG V+ A  
Sbjct: 10  RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE------------------ 337
           VFD +K ++VVSWN+M+  Y + G  E+A+ +F+KM ++ +E                  
Sbjct: 70  VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGL 129

Query: 338 ----------------------------------PTNVTIMEALHACADLGDLERGIFVH 363
                                             P   TI  AL ACA L  L  G  +H
Sbjct: 130 GCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIH 189

Query: 364 KLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             + +    +  + + N LI MY+K   +D A  +F  L+ K  VSW +++ GY  +GR 
Sbjct: 190 AYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRG 249

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM--- 479
            EAL  F +MR   ++PD  T++ V+ A +   +I        +   +   K   V+   
Sbjct: 250 KEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMID-----QGIEFFNSMSKEFGVIPGQ 304

Query: 480 ---TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVEL 529
                ++D+  + G +  A  L + M  E     W  ++ G   H    A VEL
Sbjct: 305 EHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIH----ANVEL 354



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 16/202 (7%)

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           CK+   +++PD  ++V+V+PA A +    + K +H + +RS   +++FV  AL+DMYAKC
Sbjct: 2   CKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKC 61

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G V  A  +FD + E+ V +WN M++GY   G  + A+ LF KM E   + N +++   I
Sbjct: 62  GMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +A +  GL  E +  F  ++           +G   D L        +W F Q   ++P 
Sbjct: 122 AAFAQRGLGCETLDVFREMQ-----------HGEANDALELF-----SWMFKQDGLVKPN 165

Query: 610 ITVFGAMLGACKIHKNVELGEK 631
                  L AC     + LG +
Sbjct: 166 CFTISCALIACARLAALRLGRQ 187



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 157/366 (42%), Gaps = 61/366 (16%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C S+      + +  + ++SG  +       LV ++ K   + +A++VF+ I +K 
Sbjct: 19  VLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKD 78

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDD----------------------------- 133
              ++ M+ GY++    +DA+    +MR ++                             
Sbjct: 79  VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138

Query: 134 -----------------------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF- 169
                                  V P  +  +  L  C  +  +R G++IH  ++ N F 
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           S  L+    +++MYAK G I+ A  +FD + +++ VSW +++ G+  +G  + AL++   
Sbjct: 199 SAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDE 258

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKC 287
           M   G + D +T++ +L A ++ G +  G      +M   F  I        +VD+  + 
Sbjct: 259 MRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFN-SMSKEFGVIPGQEHYACMVDLLGRA 317

Query: 288 GRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE-PTNVTIME 345
           GR+  A  + +GM+   + + W ++++      N E      +++L+   E   + T++ 
Sbjct: 318 GRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLS 377

Query: 346 ALHACA 351
            ++A A
Sbjct: 378 NIYANA 383


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/677 (35%), Positives = 376/677 (55%), Gaps = 11/677 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           ++I   ++K G       +  L+ ++ K  +  +A  +FE + ++    ++TM+ G+ + 
Sbjct: 59  KQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQS 118

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKV---CGDVGEIRRGKEIHGQLIVNGFSLDL 173
                ++    RM   +     +N    L     C  +  +  G EIHG L+  G   D 
Sbjct: 119 GDYVKSLVMFRRM-VKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDE 177

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-----WNTIVAGFAQNGFAELALDLVT 228
           F ++ ++ MY KCG I+ A  +F+R+ + +LV      WN ++ G+  N    LAL+L  
Sbjct: 178 FLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFV 237

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M E G   D  T+V +L   + +  L +GK +HG  +  G D  V V TAL++MY KCG
Sbjct: 238 EMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCG 297

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQK-MLDQGVEPTNVTIMEAL 347
             ET+  +F   ++ N+V W S++    + G P EA+  F + MLD G  P  V ++ AL
Sbjct: 298 DPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILLAAL 356

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            AC+ L    RG+ +H    ++   +DV +  +L+  Y KC  ++ A  +F  L  + LV
Sbjct: 357 RACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLV 416

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           SWNA+I G+AQN   +EAL  F  M+SK IKP++ TM  ++     LSV+   K +H  +
Sbjct: 417 SWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYL 476

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
           +R  FE N  V  +LI  YAKCG + ++R +F+ +  R+  TWN ++ G+G HG      
Sbjct: 477 LRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMF 536

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
             F KM E   KP+  TF   +S+CSHSG V+ G  YF S+ +DY +EP ++ Y  MVDL
Sbjct: 537 ATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDL 596

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG LN+A+D I  MP  P   ++G++L +CK H N +L E  AN +FELD    GY 
Sbjct: 597 LGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYR 656

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           VLLAN+Y  +   +++ +VRT +++ GL+K PGCS +E+ N +H F +G   H +S  IY
Sbjct: 657 VLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIY 716

Query: 708 TFLETLIDEIKAAGYVP 724
             +E+L  E+K  GYVP
Sbjct: 717 ATIESLSLEMKRVGYVP 733



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 285/547 (52%), Gaps = 15/547 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  L+K  G + ++ +GK+IHG L+  GF  D+F    ++ MY KCG    A  MF+RM 
Sbjct: 42  FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSLRIG 258
           ERD VSWNT+++GF Q+G    +L +  RM +E  G   + +  ++ L + A++  L  G
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-----SRNVVSWNSMIA 313
             +HG+ ++ G DS   + +AL++MY KCG ++ A  VF+ ++      RN+  WN MI 
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            YV       A+ +F +ML+ G+ P + T++  L  C+ L DL  G  +H L+  L L  
Sbjct: 222 GYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDD 281

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           DV +  +L+ MY KC   + +  IF + Q   LV W +++L  AQNG  NEAL +F +  
Sbjct: 282 DVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFM 341

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
                PD   +++ + A + LS+      IH   I+  F+ +VFV  AL+D Y KCG + 
Sbjct: 342 LDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDME 401

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A+ +F  ++ R + +WN +I G+  +     A++ F  M     KPN +T  C +S C+
Sbjct: 402 YAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCT 461

Query: 554 HSG--LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           H    ++ + +H +  L+  +    ++++  +++    + G ++ +    +K+P+   +T
Sbjct: 462 HLSVMILCKEVHCYL-LRHWFETNALVNN--SLISAYAKCGDIHSSRTVFEKLPVRNEVT 518

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
               +LG   +H   +       ++ E  + PD G +  LL++   +  +        ++
Sbjct: 519 WNSILLGF-GMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSM 577

Query: 670 MEKKGLQ 676
           ME   L+
Sbjct: 578 MEDYNLE 584



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 176/352 (50%), Gaps = 4/352 (1%)

Query: 50  CTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALY 106
           C+ L +L   ++I  LI+  GL D     T L+ ++ K      + ++F+   +    ++
Sbjct: 258 CSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMW 317

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
            +++   A+    ++A+ F      D   P        L+ C  +    RG  IHG  I 
Sbjct: 318 GSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIK 377

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
            GF  D+F    +V+ Y KCG +E A ++F  +  RDLVSWN +++GFAQN  A+ AL  
Sbjct: 378 MGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKA 437

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M  +  + + +T+  IL    ++  + + K VH Y +R  F++   V+ +L+  YAK
Sbjct: 438 FRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAK 497

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG + ++R VF+ +  RN V+WNS++  +   G  +E    F+KM +  ++P + T    
Sbjct: 498 CGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSL 557

Query: 347 LHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           L +C+  G ++ G  + + +++   L   V     ++ +  +   +++A D+
Sbjct: 558 LSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDL 609


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/685 (33%), Positives = 391/685 (57%), Gaps = 7/685 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C + + L   ++I   ++KS      + Q  +++++ K  S+ DA +VF+ +    
Sbjct: 165 LVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPN 224

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ GY++    +DA+   I+M      P    +  ++K C   G+I  G+++H 
Sbjct: 225 VVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHA 284

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            +I + F   L +   +++MY   GQIE A  +F R+P +DL+SW T++ G+ Q G+   
Sbjct: 285 HVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVE 344

Query: 223 ALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           AL L   +  +G  +  +FI   S+  A +++  L  GK VHG  ++ G    V    +L
Sbjct: 345 ALYLFRDLLRQGTYQPNEFI-FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSL 403

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            DMYAK G + +A++ F  +K+ ++VSWN++IAA+ + G+  EA+  F++M+  G+ P +
Sbjct: 404 CDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDS 463

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T +  L  C     L +G  +H  + ++    ++++ NSL++MY+KC  +  A ++F  
Sbjct: 464 ITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRD 523

Query: 401 L-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           + +   LVSWNA++    Q  +  E    + +M     KPDS T+ +++   AEL+ +  
Sbjct: 524 ISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGV 583

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              +H   I+S    +V V   LIDMYAKCG++  AR +FD      + +W+ +I GY  
Sbjct: 584 GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQ 643

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            GLG  A+ LF  M     +PN++T+L A+SACSH GLVEEG   + S++ ++GI P  +
Sbjct: 644 CGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTRE 703

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           H+  +VDLL RAG L+EA  FIQK  ++  IT +  +L ACK H NV++ E+ A  + +L
Sbjct: 704 HFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKL 763

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP      V+L NI+A+A  W+++AK+R +M++ G+QK PG S +E+K++ H F+S  + 
Sbjct: 764 DPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSS 823

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVP 724
           HPQ   IYT LE L  ++   GY P
Sbjct: 824 HPQRNLIYTMLEELWSQVLDDGYDP 848



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 237/463 (51%), Gaps = 7/463 (1%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT L+  C +   +   K+IH  ++ + +   +     ++NMY KCG +++A K+FD M 
Sbjct: 162 YTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQ 221

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
             ++VSW ++++G++QNG A  A+ +  +M   G+  D +T  S++ A    G + +G+ 
Sbjct: 222 LPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQ 281

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H + +++ F   +    AL+ MY   G++E A  VF  + +++++SW +MI  Y++ G 
Sbjct: 282 LHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGY 341

Query: 321 PEEAMRIFQKMLDQGV-EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EA+ +F+ +L QG  +P          AC+ L +LE G  VH +  +  L  +V    
Sbjct: 342 RVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGC 401

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL  MY+K   +  A   F +++   +VSWNA+I  +A NG  NEA+++F +M    + P
Sbjct: 402 SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTP 461

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           DS T +S++        +   + IH+ +++  F+K + V  +L+ MY KC  +  A  +F
Sbjct: 462 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521

Query: 500 -DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SG 556
            D+    ++ +WN ++              L+ +M     KP+ IT    +  C+   S 
Sbjct: 522 RDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSL 581

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
            V   +H + S+K   G+   +     ++D+  + G L  A D
Sbjct: 582 GVGNQVHCY-SIKS--GLILDVSVCNGLIDMYAKCGSLKHARD 621



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 197/381 (51%), Gaps = 2/381 (0%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  S++ A AN  SL   K +H + +++ +   + +   +++MY KCG ++ AR VFD M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           +  NVVSW SMI+ Y + G   +A+ ++ +M   G  P  +T    + AC   GD++ G 
Sbjct: 221 QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGR 280

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H  + +   G  ++  N+LISMY+   +++ A+++F+++  K L+SW  MI GY Q G
Sbjct: 281 QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLG 340

Query: 421 RVNEALNYFCK-MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
              EAL  F   +R    +P+ F   SV  A + L  + Y K +H + ++    +NVF  
Sbjct: 341 YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAG 400

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            +L DMYAK G + +A+  F  +    + +WN +I  +  +G    A++ F +M+     
Sbjct: 401 CSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLT 460

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ IT++  +  C     + +G    + + K  G +  +    +++ +  +   L++A +
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVK-IGFDKEITVCNSLLTMYTKCSHLHDALN 519

Query: 600 FIQKMPIEPGITVFGAMLGAC 620
             + +     +  + A+L AC
Sbjct: 520 VFRDISRNANLVSWNAILSAC 540



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 24/315 (7%)

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF---CKMRSKNIKPD 440
           MYS  K   + A IFS L  +  +  N+ I+   +     EAL  F    K  + + +P 
Sbjct: 104 MYSYVKPSLQPA-IFSNLSKE--LPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPS 160

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           ++T  S++ A A    + YAK IH  V++S ++ ++ +   +I+MY KCG++  AR +FD
Sbjct: 161 TYT--SLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFD 218

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            M   +V +W  MI GY  +G    A+ ++ +M      P+ +TF   I AC  +G ++ 
Sbjct: 219 TMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDL 278

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G      + K +    +     A++ +    G++  A +   ++P +  I+ +G M    
Sbjct: 279 GRQLHAHVIKSWFGHHLTSQ-NALISMYTNFGQIEHASNVFTRIPTKDLIS-WGTM---- 332

Query: 621 KIHKNVELGEKA-ANRLFELDPDEGGYH---VLLANIYAAASMWDKL---AKVRTIMEKK 673
            I   ++LG +  A  LF     +G Y     +  ++++A S   +L    +V  +  K 
Sbjct: 333 -ITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKF 391

Query: 674 GLQKT--PGCSLVEL 686
           GL++    GCSL ++
Sbjct: 392 GLRRNVFAGCSLCDM 406


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/576 (39%), Positives = 346/576 (60%), Gaps = 4/576 (0%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN-VSTALVDMYAKCGRVETARLVFDG 299
           ++ S++ +  +    R+G+A H   ++   + + + +   LV+MY+K  R  +A+L+   
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
             +R+VV+W ++IA  V+ G    A+  F  M    ++P + T   A  A   L     G
Sbjct: 68  TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             VH L  +    +DV +  S   MYSK    + A  +F ++  + + +WNA +      
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           GR ++AL  F + R + I+P  F + SV+ A A LSV+   K +H L +++C   N+FV 
Sbjct: 188 GRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 247

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
           +AL+DMY KCG++  A   FD M ER++ TWN MI GY   G    AV LF++M  G  +
Sbjct: 248 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 307

Query: 540 --PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
             PN +TF+C +SACS +G V  G+  F S++  YGIEP  +HY  +VDLLGRAG + +A
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 367

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
           + FI+KMPI P ++V+GA+LGA K+    ELG+ AA+ LFELDP + G HVLL+N++AAA
Sbjct: 368 YQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAA 427

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
             W++   VR  M+  G++K  GCS +   N VH F +  T H ++  I   L  L  E+
Sbjct: 428 GRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEM 487

Query: 718 KAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           +AAGY+PDT+ ++ D+E+  +   +  HSEK+A+AFGL++   G  I I KNLR+CGDCH
Sbjct: 488 EAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCH 547

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +A K+IS + GREIIVRD + FH F++  CSC DYW
Sbjct: 548 SAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 8/382 (2%)

Query: 155 RRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           R G+  H Q+I      L  F    +VNMY+K  +   A  +    P R +V+W  ++AG
Sbjct: 23  RLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
             QNG    AL   + M  +  + +  T      A  ++ S  +GK VH  A++AG  S 
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
           V V  +  DMY+K G  E AR +FD M  RN+ +WN+ ++  V  G  ++A+  F +   
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARK 202

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G+EPT+  +   L ACA L  LE G  VH L  +  +  ++ + ++L+ MY KC  ++ 
Sbjct: 203 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 262

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR--SKNIKPDSFTMVSVIPAL 451
           A   F ++  + LV+WNAMI GYA  G+ + A+  F +M   S  + P+  T V V+ A 
Sbjct: 263 AERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 322

Query: 452 AELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTT 509
           +    +     I  ++  R   E        ++D+  + G V  A      M  R  V+ 
Sbjct: 323 SRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSV 382

Query: 510 WNVMIDG---YGTHGLGKAAVE 528
           W  ++     +G   LGK A +
Sbjct: 383 WGALLGASKMFGKSELGKVAAD 404



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 9/354 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV+++ K +  + A  +    P++    +  ++ G  +      A+     MR D + P 
Sbjct: 48  LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + +    K  G +     GK++H   +  G   D+F      +MY+K G  EEA KMFD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPER++ +WN  ++     G  + AL       +EG       + S+L A A +  L +
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEV 227

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK+VH  A++A     + V +ALVDMY KCG +E A   FD M  RN+V+WN+MI  Y  
Sbjct: 228 GKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAH 287

Query: 318 GGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFV-HKLLDQLKLGTD 374
            G  + A+ +F +M      V P  VT +  L AC+  G +  G+ +   +  +  +   
Sbjct: 288 QGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPG 347

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMI-----LGYAQNGRV 422
                 ++ +  +   V++A     K+  +  VS W A++      G ++ G+V
Sbjct: 348 AEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKV 401



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 4/270 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++  L +K+G             ++ K     +A ++F+ +P++  A ++  L      
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              DDA++  I  R + + P  +  + +L  C  +  +  GK +H   +      ++F  
Sbjct: 188 GRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 247

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           + +V+MY KCG IE+A + FD MPER+LV+WN ++ G+A  G A++A+ L   M     R
Sbjct: 248 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 307

Query: 237 --GDFITIVSILPAVANVGSLRIGKAV-HGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
              +++T V +L A +  GS+ +G  +      R G +        +VD+  + G VE A
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 367

Query: 294 RLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
                 M  R  VS W +++ A    G  E
Sbjct: 368 YQFIKKMPIRPTVSVWGALLGASKMFGKSE 397


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/583 (39%), Positives = 356/583 (61%), Gaps = 5/583 (0%)

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           GR   F    SIL    +  ++R G+ VH + ++  +   V + T L+ +Y KC  +  A
Sbjct: 57  GREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 116

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +FD M  RNVVSW +MI+AY + G   EA+ +F +ML    EP + T    L +C   
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              E G  +H +  +    + + + +SL+ MY+K  ++  A  +F  L  + +V+  A+I
Sbjct: 177 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            GYAQ G   EAL  F +++ + +  +S T  SV+ AL+ L+ + + K +H+ V+RS   
Sbjct: 237 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 296

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             V ++ +LIDMY+KCG V  AR +FD M ER   +WN M+ GY  HG+ +  +ELF  M
Sbjct: 297 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 356

Query: 534 L-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLGR 590
             E   KP+ IT+L  +S CSH  L + G+  F ++   KD GIEP + HYG +VDLLGR
Sbjct: 357 REENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGHYGCVVDLLGR 415

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGR+ EA+DFI+KMP  P   ++G++LG+C++H +VE+G     +L EL+P+  G +V+L
Sbjct: 416 AGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVIL 475

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           +N+YA+A  W+ +  +R +M++K + K PG S VEL   VH+F++    HP+ + +   +
Sbjct: 476 SNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKV 535

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           + L  + K  GYVPD + + +DV++  +E +L  HSEKLA+AFGL+ +  G+TI + KNL
Sbjct: 536 KELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNL 595

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           R+C DCH+  K++S +  R +I+RD +RFH    GVCSCGDYW
Sbjct: 596 RICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 205/397 (51%), Gaps = 9/397 (2%)

Query: 25  KHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSL 81
           K  L Q A +   +       +L  C S + +R   R+   +IK+        +T+L+ L
Sbjct: 47  KEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVL 106

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
           + K + L DA  +F+ +P +    +  M+  Y++     +A++  + M   D  P  + +
Sbjct: 107 YNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 166

Query: 142 TYLLKVC-GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
             +L  C G +G    G++IH   I   +   +F  + +++MYAK G+I +A+ +F  +P
Sbjct: 167 ATILTSCYGSLG-FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ERD+V+   I++G+AQ G  E AL L  ++  EG   + +T  S+L A++ + +L  GK 
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH + +R+G  S V +  +L+DMY+KCG V  AR +FD M  R  +SWN+M+  Y + G 
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345

Query: 321 PEEAMRIFQKMLDQG-VEPTNVTIMEALHACA--DLGDLERGIFVHKLLDQLKLGTDVSM 377
             E + +F+ M ++  V+P ++T +  L  C+   L D+   IF + +  +  +  D+  
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMI 413
              ++ +  +  +V+ A D   K+    T   W +++
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 442


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 386/674 (57%), Gaps = 4/674 (0%)

Query: 64   IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
            IK GL       + L++++ K   +  A +VF+ + ++   L++ ML GYA+       +
Sbjct: 376  IKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVM 435

Query: 124  SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
                 MR     P  + YT +L  C  +  +  G+++H  +I + F  +LF    +V+MY
Sbjct: 436  KLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMY 495

Query: 184  AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            AKCG +EEA + F+ +  RD VSWN I+ G+ Q    + A ++  RM  +G   D +++ 
Sbjct: 496  AKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLA 555

Query: 244  SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
            SIL   AN+ +L  G+ VH + +++G  + +   ++L+DMY KCG +E AR VF  M SR
Sbjct: 556  SILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSR 615

Query: 304  NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
            +VVS N++IA Y +  +  EA+ +FQ+M ++G+ P+ +T    L AC     L  G  +H
Sbjct: 616  SVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIH 674

Query: 364  KLLDQLKLGTDVSMTN-SLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGR 421
             L+ +  L  D      SL+ MY   ++   A  +FS+ Q  K+ + W A+I G+ QNG 
Sbjct: 675  CLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGC 734

Query: 422  VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
              EAL  + +M   N +PD  T  SV+ A + L+ +   + IH+L+     + +    +A
Sbjct: 735  SEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSA 794

Query: 482  LIDMYAKCGAVGTARALFDMMNERH-VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            ++DMYAKCG + ++  +F+ M  ++ V +WN MI G+  +G  + A+++F++M     +P
Sbjct: 795  VVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRP 854

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            +D+TFL  ++ACSH+G V EG   F  +   Y I P +DH   M+DLLGR G L EA +F
Sbjct: 855  DDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEF 914

Query: 601  IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
            I K+  EP   ++  +LGAC+IH +   G +AA +L EL+P+    +VLL+NIYAA+  W
Sbjct: 915  IDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNW 974

Query: 661  DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            D++  VR  M +KGL+K PGCS + +  + + F +G   HP +  I+  L+ LI  +K  
Sbjct: 975  DEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKED 1034

Query: 721  GYVPDTNSIHDVED 734
            GY+ +T+S+ + ED
Sbjct: 1035 GYIAETDSLLEDED 1048



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 188/689 (27%), Positives = 327/689 (47%), Gaps = 62/689 (8%)

Query: 1   MSSHSQCQLSVF---TNSTPTQTLHEH--KHTLSQRAYIPSRIYRHPSALLLEVCTSLKE 55
           +S H Q   S      N T    +  H  K  L Q   I     RHP     E    L +
Sbjct: 42  LSFHHQSNFSTIQRQVNQTSEHKIFTHLLKICLQQCQRIK---IRHP---FDETPQRLAQ 95

Query: 56  LRRILPLI----IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
             R    I    +K G   +    + +V L+ K  ++  AA+ F  +  +    ++++L 
Sbjct: 96  ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLS 155

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y++  SL+  +     ++   V+P  + Y  +L  C  + +I  GK++H  +I  GF  
Sbjct: 156 MYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           + F    +++MY+KCG + +A K+FD + + D VSW  ++AG+ Q G  E AL +   M 
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           + G   D +  V+++ A   +                                   GR++
Sbjct: 276 KLGLVPDQVAFVTVITACVGL-----------------------------------GRLD 300

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A  +F  M + NVV+WN MI+ +V+ G   EA+  F+ M   GV+ T  T+   L A A
Sbjct: 301 DACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIA 360

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            L  L  G+ VH    +  L ++V + +SLI+MY+KC+K++ A  +F  L  + LV WNA
Sbjct: 361 SLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNA 420

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M+ GYAQNG  ++ +  F +MR     PD FT  S++ A A L  +   + +H+ +I+  
Sbjct: 421 MLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN 480

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           FE N+FV   L+DMYAKCGA+  AR  F+ +  R   +WN +I GY        A  +F 
Sbjct: 481 FEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFR 540

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M+     P++++    +S C++   +E+G      L K  G++  +    +++D+  + 
Sbjct: 541 RMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKC 599

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACK--IHKNVELGEKAANRLFELDPDEGGYHVL 649
           G +  A      MP    +++   + G  +  + + ++L ++  N    L+P E    + 
Sbjct: 600 GAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNE--GLNPSE----IT 653

Query: 650 LANIYAAASMWDKL---AKVRTIMEKKGL 675
            A++  A +   KL    ++  +++K+GL
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKRGL 682



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 288/568 (50%), Gaps = 8/568 (1%)

Query: 54  KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGY 113
           +E  ++   + K GL    +    +++       L DA  +F  +P+     ++ M+ G+
Sbjct: 265 EEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGH 324

Query: 114 AKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDL 173
            K     +A+ F   M    V         +L     +  +  G  +H Q I  G + ++
Sbjct: 325 VKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNV 384

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           +  + ++NMYAKC ++E A K+FD + ER+LV WN ++ G+AQNG+A   + L + M   
Sbjct: 385 YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G   D  T  SIL A A +  L +G+ +H + ++  F+  + V   LVDMYAKCG +E A
Sbjct: 445 GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEA 504

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R  F+ +++R+ VSWN++I  YV+  + +EA  +F++M+  G+ P  V++   L  CA+L
Sbjct: 505 RQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANL 564

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             LE+G  VH  L +  L T +   +SLI MY KC  ++ A  +FS +  +++VS NA+I
Sbjct: 565 QALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAII 624

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI-RSCF 472
            GYAQN  V EA++ F +M+++ + P   T  S++ A      +   + IH L+  R   
Sbjct: 625 AGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLL 683

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
               F+  +L+ MY        A  LF +    +    W  +I G+  +G  + A++L+ 
Sbjct: 684 YDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQ 743

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           +M     +P+  TF   + ACS    + +G  IH   SL    G++       A+VD+  
Sbjct: 744 EMHRNNARPDQATFASVLRACSILASLGDGRMIH---SLIFHVGLDSDELTGSAVVDMYA 800

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAML 617
           + G +  +    ++M  +  +  + +M+
Sbjct: 801 KCGDMKSSVQVFEEMGSKNDVISWNSMI 828



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 295/620 (47%), Gaps = 86/620 (13%)

Query: 106 YHTMLKGYAKFASL--DDAVSFLIRMRYDDVAPVVYN------YTYLLKVCGDVGE---- 153
           + +M  G A F +L   +++SF  +  +  +   V        +T+LLK+C    +    
Sbjct: 23  HESMRHGRAPFTTLHRSNSLSFHHQSNFSTIQRQVNQTSEHKIFTHLLKICLQQCQRIKI 82

Query: 154 --------------IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
                          R  K IH Q +  GF       + +V++YAKCG +E A K F+++
Sbjct: 83  RHPFDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL 142

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            +RD+++WN++++ +++ G  E  +     +   G   +  T   +L + A +  + +GK
Sbjct: 143 EKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGK 202

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            VH   ++ GF+       +L+DMY+KCG +  AR +FD +   + VSW +MIA YV+ G
Sbjct: 203 QVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVG 262

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
            PEEA+++F+ M   G+ P  V  +  + AC  LG                         
Sbjct: 263 LPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG------------------------- 297

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
                     ++D A D+F ++    +V+WN MI G+ + G   EA+++F  M    +K 
Sbjct: 298 ----------RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKS 347

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
              T+ SV+ A+A L  + Y   +HA  I+     NV+V ++LI+MYAKC  +  A+ +F
Sbjct: 348 TRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVF 407

Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           D ++ER++  WN M+ GY  +G     ++LF++M      P++ T+   +SAC+    +E
Sbjct: 408 DALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLE 467

Query: 560 EG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
            G  +H F  +K ++     +++   +VD+  + G L EA    + +     ++    ++
Sbjct: 468 MGRQLHSFI-IKHNFEYNLFVEN--TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIV 524

Query: 618 GACKIHKNVELGEKAANRLFE------LDPDEGGYHVLLANIYAAASMWDKL---AKVRT 668
           G  +     E  E  A  +F       + PDE    V LA+I +  +    L    +V  
Sbjct: 525 GYVQ-----EEDEDEAFNMFRRMILDGIAPDE----VSLASILSGCANLQALEQGEQVHC 575

Query: 669 IMEKKGLQKT--PGCSLVEL 686
            + K GLQ     G SL+++
Sbjct: 576 FLVKSGLQTCLYAGSSLIDM 595


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 351/592 (59%), Gaps = 8/592 (1%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+ ++  M   G   D IT   ++      G++R GK VH +    G+     ++  L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY K   +E A+++FD M  RNVVSW +MI+AY      + AMR+   M   GV P   T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               L AC  L DL++   +H  + ++ L +DV + ++LI +YSK  ++  A  +F ++ 
Sbjct: 389 FSSVLRACERLYDLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
               V WN++I  +AQ+   +EAL+ +  MR      D  T+ SV+ A   LS++   + 
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
            H  V++  F++++ +  AL+DMY KCG++  A+ +F+ M ++ V +W+ MI G   +G 
Sbjct: 506 AHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGF 563

Query: 523 GKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
              A+ LF  M ++GP KPN IT L  + ACSH+GLV EG +YF S+   YGI+P  +HY
Sbjct: 564 SMEALNLFESMKVQGP-KPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHY 622

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G M+DLLGRA +L++    I +M  EP +  +  +L AC+  +NV+L   AA  + +LDP
Sbjct: 623 GCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDP 682

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
            + G +VLL+NIYA +  W+ +A+VR  M+K+G++K PGCS +E+  ++H+F  G   HP
Sbjct: 683 QDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHP 742

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
           Q   I   L   I  +  AGYVPDTN +  D+E   +E+ L  HSEKLAI FG+++    
Sbjct: 743 QIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKE 802

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            TI I KNL++CGDCH   K I+ +  R I++RD  R+H F++GVCSCGDYW
Sbjct: 803 KTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 9/401 (2%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           L  A+  L  M    V      Y+ L+K C   G +R GK +H  +  NG+    F    
Sbjct: 266 LPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNI 325

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGD 238
           ++NMY K   +EEA  +FD+MPER++VSW T+++ ++     + A+ L+  M  +G   +
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385

Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD 298
             T  S+L A   +  L   K +H + M+ G +S V V +AL+D+Y+K G +  A  VF 
Sbjct: 386 MFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442

Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
            M + + V WNS+IAA+ +  + +EA+ +++ M   G      T+   L AC  L  LE 
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
           G   H  +  LK   D+ + N+L+ MY KC  ++ A  IF+++  K ++SW+ MI G AQ
Sbjct: 503 GRQAH--VHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF--EKNV 476
           NG   EALN F  M+ +  KP+  T++ V+ A +   ++    W +   + + +  +   
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG-WYYFRSMNNLYGIDPGR 619

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
                ++D+  +   +     L   MN E  V TW  ++D 
Sbjct: 620 EHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 200/365 (54%), Gaps = 9/365 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +++E +R+   I  +G   +      L++++ K+N L +A  +F+ +P++    + TM+ 
Sbjct: 300 AVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMIS 359

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
            Y+     D A+  L  M  D V P ++ ++ +L+ C  + ++   K++H  ++  G   
Sbjct: 360 AYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLES 416

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D+F  + ++++Y+K G++ EA K+F  M   D V WN+I+A FAQ+   + AL L   M 
Sbjct: 417 DVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMR 476

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G   D  T+ S+L A  ++  L +G+  H + ++  FD  + ++ AL+DMY KCG +E
Sbjct: 477 RVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLE 534

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A+ +F+ M  ++V+SW++MIA   + G   EA+ +F+ M  QG +P ++TI+  L AC+
Sbjct: 535 DAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS 594

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTN--SLISMYSKCKKVDRAADIFSKLQGKT-LVS 408
             G +  G +  + ++ L  G D    +   ++ +  + +K+D    +  ++  +  +V+
Sbjct: 595 HAGLVNEGWYYFRSMNNL-YGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVT 653

Query: 409 WNAMI 413
           W  ++
Sbjct: 654 WRTLL 658



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 143/275 (52%), Gaps = 12/275 (4%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L  C  L +L+++   I+K GL      ++ L+ ++ K   L +A +VF  +      +
Sbjct: 392 VLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVV 451

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++++  +A+ +  D+A+     MR           T +L+ C  +  +  G++ H  ++
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
              F  DL     +++MY KCG +E+A  +F+RM ++D++SW+T++AG AQNGF+  AL+
Sbjct: 512 --KFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALN 569

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-----GFDSIVNVSTAL 280
           L   M  +G + + ITI+ +L A ++ G +  G     Y  R+     G D        +
Sbjct: 570 LFESMKVQGPKPNHITILGVLFACSHAGLVNEG----WYYFRSMNNLYGIDPGREHYGCM 625

Query: 281 VDMYAKCGRV-ETARLVFDGMKSRNVVSWNSMIAA 314
           +D+  +  ++ +  +L+ +     +VV+W +++ A
Sbjct: 626 LDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/658 (36%), Positives = 375/658 (56%), Gaps = 37/658 (5%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVN---MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           IH Q+I  G     +A++ ++    +      +  A  +F+ + E +L+ WNT+  G A 
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           +     AL L   M   G   +  T   +L + A   + + G+ +HG+ ++ G D  + V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 277 STALVDMYAKCGRVETARLVFD---------------GMKSR----------------NV 305
            T+L+ MY + GR+E A  VFD               G  SR                +V
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           VSWN+MI+ Y E GN +EA+ +F+ M+   V P   T++  + ACA  G +E G  VH  
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           +D    G+++ + N+LI +YSKC +++ A  +F  L  K ++SWN +I GY       EA
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC--FEKNVFVMTALI 483
           L  F +M      P+  TM+S++PA A L  I   +WIH  + +          + T+LI
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLI 368

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAKCG +  A  +F+ +  + +++WN MI G+  HG   A+ ++F++M +   +P+DI
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDI 428

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+  +SACSHSG+++ G H F S+ +DY + P ++HYG M+DLLG +G   EA + I  
Sbjct: 429 TFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINT 488

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           M +EP   ++ ++L ACK+H NVELGE  A  L +++P+  G +VLL+NIYA A  W+++
Sbjct: 489 MEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEV 548

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A  R ++  KG++K PGCS +E+ + VH F  G   HP+++ IY  LE +   ++ AG+V
Sbjct: 549 ANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFV 608

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           PDT+ +  ++E+  +E  L  HSEKLAIAFGL+++ PG+ + I KNLRVC +CH A K
Sbjct: 609 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 180/582 (30%), Positives = 298/582 (51%), Gaps = 75/582 (12%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAARVFEPIPDKLDALYHT 108
           L+ LR I   +IK+GL + +   +KL+  FC     ++ L  A  VFE I +    +++T
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIE-FCILSPHFDGLPYAISVFETIQEPNLLIWNT 61

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M +G+A  +    A+   + M    + P  Y + +LLK C      + G++IHG ++  G
Sbjct: 62  MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAY-------------------------------KMFD 197
             LDL+  T +++MY + G++E+A+                               KMFD
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +P +D+VSWN +++G+A+ G  + AL+L   M +   R D  T+V+++ A A  GS+ +
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH +    GF S + +  AL+D+Y+KCG +ETA  +F+G+  ++V+SWN++I  Y  
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LK-LGTDV 375
               +EA+ +FQ+ML  G  P +VT++  L ACA LG ++ G ++H  +D+ LK +    
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           S+  SLI MY+KC  ++ A  +F+ +  K+L SWNAMI G+A +GR + + + F +MR  
Sbjct: 362 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKN 421

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
            I+PD  T V ++ A +   ++   + I     RS  +   + MT  ++ Y         
Sbjct: 422 GIEPDDITFVGLLSACSHSGMLDLGRHI----FRSMTQD--YKMTPKLEHYG-------- 467

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
                            MID  G  GL K A E+ N M     +P+ + +   + AC   
Sbjct: 468 ----------------CMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMH 508

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
           G VE G  +  +L K   IEP     Y  + ++   AGR NE
Sbjct: 509 GNVELGESFAQNLIK---IEPENPGSYVLLSNIYATAGRWNE 547


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/776 (33%), Positives = 416/776 (53%), Gaps = 32/776 (4%)

Query: 46   LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
            +L  CT+L +  +I   +   GL       T  VS F K   L+ A  VFE +    + +
Sbjct: 338  VLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVV 397

Query: 106  YHT-MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
              T M+  YA+   +  A     RM   D  P    +  ++  C    ++ R ++IH  +
Sbjct: 398  SWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHM 454

Query: 165  IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
            + +GF  D+     +V MY KCG ++ A+ +F+ + ER +V+WN++++ FA NG  E +L
Sbjct: 455  VASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSL 514

Query: 225  DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
             L  RM  EG + D IT +++L A  +V   R       YA     +  +    A V  Y
Sbjct: 515  KLYERMLLEGTKPDKITYLAVLDACQSVSEAR------RYAATFELELDIAARNAAVSAY 568

Query: 285  AKCGRVETARLVFDGMKSRN-VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
            A+CG ++ A+  FD ++ +N  V+WN+MI+   + G  ++A+  F KM  +GV   +VT 
Sbjct: 569  ARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTY 628

Query: 344  MEALHACADLGDLERGIFVHK--LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            + +L AC+ L DL RG  +H   LL+ +    + +++N++I+MY KC  +D A D F K+
Sbjct: 629  LASLEACSSLKDLTRGRQLHARILLENIH---EANLSNAVINMYGKCGSLDEAMDEFVKM 685

Query: 402  QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
              + ++SWN MI  YAQ+G   +AL +F +M  +   PD  T +  I A   +  +   K
Sbjct: 686  PERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGK 745

Query: 462  WIHALVIRS--CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
             IH++V  +  C E++  V TAL+ MYA+CG++  A+++F   + R++ TW+ +I     
Sbjct: 746  TIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQ 805

Query: 520  HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE-GIHYFTSLKKDYGIEPVM 578
            HG    A++LF +M    TKP+ +TF   ++ACS  G+V++ G   F +L + Y +    
Sbjct: 806  HGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASA 865

Query: 579  DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            +HYG MV++LGRAG+L EA   IQ MP +    ++ A+L AC    ++E G +AANR  +
Sbjct: 866  EHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQ 925

Query: 639  LDPDE-GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC-SLVELKNEVHSFYSG 696
            LDP        +LA +Y AA  W+  A+VR  +E +  ++ PG  S +E+ N VH F   
Sbjct: 926  LDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRVHEFGED 985

Query: 697  STK--HPQSKRIYTFLETLID-EIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFG 753
              +   P+  +I   L+ L    ++  G   D N+   +       L   HSEK+AI FG
Sbjct: 986  DDRLQGPRLDKIRGELQRLSSLAVEEGGICKDENARAHI-------LGCCHSEKVAIGFG 1038

Query: 754  LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCF-KNGVCSC 808
            ++++  G  I I KNLR C DCH   K++S    REI VRD +  HCF  NG CSC
Sbjct: 1039 IVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFHTNGSCSC 1094



 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 193/614 (31%), Positives = 313/614 (50%), Gaps = 29/614 (4%)

Query: 20  TLHEHKHTL--SQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLF 74
           +L  H + L  S  +  P+R      A LL+ C   K     + +   I+ SG       
Sbjct: 9   SLQTHINQLKKSSESLQPARY-----ASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYL 63

Query: 75  QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           Q  L+ ++ K   L DA  VFE +P      +  ++  YAK   L + + F  +M+ D  
Sbjct: 64  QNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGT 123

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
            P  + ++ +L  C   G +  GK IH  +++ G    +     +VN+Y KCG++ EA  
Sbjct: 124 KPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQVVG-NAIVNLYGKCGRVHEAKA 182

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVG 253
           +F+R+PER+LVSWN ++A  AQNG  + A+ +   M  +G  R +  T VS++ A +N+ 
Sbjct: 183 VFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLL 242

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVV---SWNS 310
            L  GK+ H   +R GFDS + V  +LV+MY KCG V+ ARLVF+ M+ R+V+   SW  
Sbjct: 243 DLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTV 302

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +IAA+   G+  EA  +F KM  +GV P  VT +  L AC  L   E+ IF    +  L 
Sbjct: 303 IIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEK-IFAR--VKHLG 359

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYF 429
           L  D ++  + +S ++K   +  A D+F  L   + +VSW  MI  YAQ G +  A + +
Sbjct: 360 LELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLY 419

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M   + +P++ T ++V+ +      +  A+ IHA ++ S FE +V +   L+ MY KC
Sbjct: 420 KRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKC 476

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G+V +A ++F+ + ER V  WN M+  + ++G  + +++L+ +ML   TKP+ IT+L  +
Sbjct: 477 GSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVL 536

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
            AC     V E   Y  + + +  I        A V    R G L EA      +  +  
Sbjct: 537 DACQS---VSEARRYAATFELELDIAA----RNAAVSAYARCGSLKEAKAAFDAIQWKNN 589

Query: 610 ITVFGAMLGACKIH 623
              + AM+     H
Sbjct: 590 AVTWNAMISGLAQH 603



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 182/639 (28%), Positives = 317/639 (49%), Gaps = 65/639 (10%)

Query: 46  LLEVCTSLKELRR---ILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEP--IP 99
           +++ C++L +L R       II++G  D +LF    LV+++ K  S+  A  VFE   + 
Sbjct: 234 VVDACSNLLDLPRGKSTHERIIRTGF-DSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLR 292

Query: 100 DKLDALYHT-MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
           D L     T ++  +A    L +A     +M  + V P    +  +L+ C  + +  +  
Sbjct: 293 DVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEK-- 350

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PERDLVSWNTIVAGFAQN 217
            I  ++   G  LD    T  V+ +AK G +  A  +F+ +   R++VSW  ++  +AQ 
Sbjct: 351 -IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQ 409

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           GF   A DL  RM  E    + +T ++++ +      L   + +H + + +GF+S V + 
Sbjct: 410 GFIRAAFDLYKRMDCEP---NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQ 466

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
             LV MY KCG V++A  +F+ +K R+VV+WNSM++A+   G  E +++++++ML +G +
Sbjct: 467 VCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTK 526

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P  +T +  L AC  + +  R           +L  D++  N+ +S Y++C  +  A   
Sbjct: 527 PDKITYLAVLDACQSVSEARR------YAATFELELDIAARNAAVSAYARCGSLKEAKAA 580

Query: 398 FSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           F  +Q K   V+WNAMI G AQ+G   +AL  F KM  + ++ +S T ++ + A + L  
Sbjct: 581 FDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKD 640

Query: 457 IRYAKWIHA-LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           +   + +HA +++ +  E N  +  A+I+MY KCG++  A   F  M ER V +WN MI 
Sbjct: 641 LTRGRQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIA 698

Query: 516 GYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISACSH--SGLVEEGIHYFTS----- 567
            Y  HG G+ A+E F +M LEG T P+  T+L AI AC    S  + + IH   +     
Sbjct: 699 TYAQHGSGRQALEFFKQMDLEGWT-PDRATYLGAIDACGSVPSLALGKTIHSIVATAAPC 757

Query: 568 LKKDYGIEPVM-------------------DH------YGAMVDLLGRAGRLNEAWDFIQ 602
           L++D G+   +                    H      +  ++    + GR NEA D  +
Sbjct: 758 LEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFR 817

Query: 603 KMPIE---PGITVFGAMLGACKIHKNVELGEKAANRLFE 638
           +M ++   P    F  ++ AC     V+ G +   R+F+
Sbjct: 818 EMQLQGTKPDALTFSTLVAACSRRGVVKDGGR---RIFD 853


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/689 (33%), Positives = 382/689 (55%), Gaps = 8/689 (1%)

Query: 129 MRYDDVAPVVYN---YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
           +R  D+A +  N   Y YL K+CG +G +  GK  H +L     S + F    ++ MY  
Sbjct: 68  IRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANS-NKFIDNCILQMYCD 126

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           C     A + FD++ +RDL SW TI++ + + G  + A+ L  RM + G   +F    ++
Sbjct: 127 CKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTL 186

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           + + A+   L +GK +H   +R  F + +++ T + +MY KCG ++ A +  + M  ++ 
Sbjct: 187 IMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSA 246

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V+   ++  Y +     +A+ +F KM+ +GVE         L ACA LGDL  G  +H  
Sbjct: 247 VACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSY 306

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
             +L L ++VS+   L+  Y KC + + A   F  +      SW+A+I GY Q+G+ + A
Sbjct: 307 CIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRA 366

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           L  F  +RSK +  +SF   ++  A + +S +     IHA  I+      +   +A+I M
Sbjct: 367 LEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITM 426

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           Y+KCG V  A   F  +++     W  +I  +  HG    A+ LF +M     +PN +TF
Sbjct: 427 YSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTF 486

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           +  ++ACSHSGLV+EG  +  S+   YG+ P +DHY  M+D+  RAG L EA + I+ MP
Sbjct: 487 IGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMP 546

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
            EP +  + ++LG C   +N+E+G  AA+ +F LDP +   +V++ N+YA A  WD+ A+
Sbjct: 547 FEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQ 606

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG--YV 723
            R +M ++ L+K   CS + +K +VH F  G   HPQ+++IY+ L+ L    K      +
Sbjct: 607 FRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLL 666

Query: 724 PDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
            + N++ D  +  +++ L  HSE+LAIA+GL+ ++  + I + KN R C DCH   K +S
Sbjct: 667 NEENALCDFTE--RKDQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVS 724

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +VTGRE++VRD +RFH   +G CSC DYW
Sbjct: 725 VVTGRELVVRDGNRFHHINSGECSCRDYW 753



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 247/533 (46%), Gaps = 47/533 (8%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++ ++C   S + A R F+ I D+  + + T++  Y +   +D+AV   +RM    + P 
Sbjct: 120 ILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPN 179

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              ++ L+    D   +  GK+IH QLI   F+ D+   T + NMY KCG ++ A    +
Sbjct: 180 FSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATN 239

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
           +M  +  V+   ++ G+ Q      AL L ++M  EG   D      IL A A +G L  
Sbjct: 240 KMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYT 299

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H Y ++ G +S V+V T LVD Y KC R E AR  F+ +   N  SW+++IA Y +
Sbjct: 300 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 359

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  + A+ +F+ +  +GV   +        AC+ + DL  G  +H    +  L   +S 
Sbjct: 360 SGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 419

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +++I+MYSKC KVD A   F  +     V+W A+I  +A +G+ +EAL  F +M+   +
Sbjct: 420 ESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGV 479

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P                                   NV     L++  +  G V   + 
Sbjct: 480 RP-----------------------------------NVVTFIGLLNACSHSGLVKEGKQ 504

Query: 498 LFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             D M +++     +  +N MID Y   GL   A+E+   M   P +P+ +++   +  C
Sbjct: 505 FLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSM---PFEPDVMSWKSLLGGC 561

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDH-YGAMVDLLGRAGRLNEAWDFIQKM 604
                +E G+    +    + ++P+    Y  M +L   AG+ +EA  F + M
Sbjct: 562 WSRRNLEIGM---IAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMM 611



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 14/344 (4%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           +++L+ C +L +L   ++I    IK GL  +    T LV  + K      A + FE I +
Sbjct: 285 SIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHE 344

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
             D  +  ++ GY +    D A+     +R   V    + Y  + + C  V ++  G +I
Sbjct: 345 PNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQI 404

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   I  G    L   + ++ MY+KCG+++ A++ F  + + D V+W  I+   A +G A
Sbjct: 405 HADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKA 464

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA-VHGYAMRAGFDSIVNVSTA 279
             AL L   M   G R + +T + +L A ++ G ++ GK  +     + G +  ++    
Sbjct: 465 SEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNC 524

Query: 280 LVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAM----RIFQKMLDQ 334
           ++D+Y++ G +  A  V   M    +V+SW S++       N E  M     IF+  LD 
Sbjct: 525 MIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFR--LDP 582

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
            ++     IM  L+A A  G  +      K++ +  L  +VS +
Sbjct: 583 -LDSATYVIMFNLYALA--GKWDEAAQFRKMMAERNLRKEVSCS 623


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 345/573 (60%), Gaps = 6/573 (1%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + ++L AV +  S+   + +H    ++       +   LV  Y K G  E A  +FD M 
Sbjct: 42  VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGI 360
            +++VSWNS+I+ +        ++  F  M  +  V+P  VTI+  + AC+  G L+ G 
Sbjct: 102 HKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGK 157

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           ++H    ++    +V + NSLI+MY K   +  A  +F  +     VSWN++I     NG
Sbjct: 158 YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNG 217

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              E ++YF KMR   I+ D  T+++++ A   L V + A+ IH L+  + F   + + T
Sbjct: 218 CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT 277

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+D YAK G +  +  +F  +       W  M+ GY  HGLG+ A++LF  M     +P
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEP 337

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + +TF   +SACSHSGLV EG  YF  + + YGIEP +DHY  MVDLLGR G LN+A++ 
Sbjct: 338 DHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEV 397

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           IQ MP+EP   V+GA+LGAC++H N+ELG++ A  L  ++P +   +++L+N+Y+A+  W
Sbjct: 398 IQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSW 457

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
              AKVR +++++GL++TPG S +E  N+ H F+ G   HP++++IY+ LE L+ +I+ A
Sbjct: 458 KDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKA 517

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GY   T  +  DVE+ V+E++++ HSEKLAIAFGLL S  G  + I KNLR+CGDCH+  
Sbjct: 518 GYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTA 577

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K ISL+  R II+RD  RFH F +G CSC DYW
Sbjct: 578 KLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 215/434 (49%), Gaps = 18/434 (4%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEV--CTSLKELRRILPLIIKSGLCDQHLFQTKL 78
           LH   H + Q A  P  I    SALL+ V  C S+   R I   + KS L        +L
Sbjct: 25  LHRSFHLVRQCA-TPEAIV---SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQL 80

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPV 137
           V+ + K     DA ++F+ +P K    +++++ G+++   L  +++    M+++  V P 
Sbjct: 81  VTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPN 138

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 ++  C   G +  GK IHG  I  G +L++     ++NMY K G +  A ++F+
Sbjct: 139 EVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFE 196

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +P+ + VSWN+I+A    NG A   +D   +M   G   D  TI+++L A  ++G  ++
Sbjct: 197 AIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKL 256

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            +++HG     GF + + ++TAL+D YAK GR+  +  VF  +   + V+W +M+A Y  
Sbjct: 257 AESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAA 316

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGTDVS 376
            G   EA+++F+ M ++G+EP +VT    L AC+  G +  G     ++ ++  +   V 
Sbjct: 317 HGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVD 376

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRV---NEALNYFCKM 432
             + ++ +  +C  ++ A ++   +  +     W A++     +G +    E   +   M
Sbjct: 377 HYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM 436

Query: 433 RSKNIKPDSFTMVS 446
               + P ++ M+S
Sbjct: 437 EP--LDPRNYIMLS 448


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/699 (33%), Positives = 389/699 (55%), Gaps = 5/699 (0%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A+ L++C+ L++     +I  + ++ G     +  + LV ++ K NSL D+  VF  +PD
Sbjct: 161 AVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPD 220

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    +   + G  +   L   +     M+   +      Y  + + C  +   R G ++
Sbjct: 221 KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQL 280

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +   F  D+   T  ++MYAKC  + +AYK+F  +P+ +L S+N ++ G+A+N   
Sbjct: 281 HCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQG 340

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A  L  ++ +     D +++   L A A +     G  +HG A+++   S + V+ A+
Sbjct: 341 FQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAI 400

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMY KCG +  A  +FD M+ R+ VSWN++I A  +  +  + +  F  ML   +EP  
Sbjct: 401 LDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDE 460

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T    L ACA       G+ VH  + +  +G  + + ++L+ MYSKC  ++ A  I  +
Sbjct: 461 FTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYR 520

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L+ +T+VSWNA+I G++   +  ++  +F  M    ++PD+FT  +V+   A L+ +   
Sbjct: 521 LEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLG 580

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K IHA +I+     +V++ + L+DMY+KCG +  +  +F    +R   TWN MI G+  H
Sbjct: 581 KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYH 640

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           GLG+ A+ELF  ML    KPN  TF+  + ACSH G  ++G+ YF  +   Y +EP ++H
Sbjct: 641 GLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEH 700

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVD+LGR+G++ EA   IQ MP E    ++  +L  CKI  NVE+ EKAA+ L +LD
Sbjct: 701 YSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLD 760

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P++   + LL+NIYA A MW +++K+R  M    L+K PGCS +E+K+EVH+F      H
Sbjct: 761 PEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAH 820

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQEN 739
           P+ + IY+ L+ LI +++ +G  P+ ++I  VE+ V+EN
Sbjct: 821 PKCEMIYSLLDLLICDMRRSGCAPEIDTIQ-VEE-VEEN 857



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 267/548 (48%), Gaps = 42/548 (7%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            ++++ + C +   ++ GKE H  +I++GF+  +F    ++ MY KC  +E AYK+F+ M
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG-------------RRGDFITIVSIL 246
           P+RD+VSWNT+V G A  G  ELA  +   M   G             + GD    +++ 
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 247 PAVANVG----------SLRI---------GKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
             + ++G          SL+I         G  +HG A++ GFD  V   +ALVDMYAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
             +E +  VF  +  +N +SW++ IA  V+       +++F++M  +G+  +  T     
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            +CA L     G  +H    +   G+DV +  + + MY+KC  +  A  +FS L    L 
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR---YAKWIH 464
           S+NAMI+GYA+N +  +A   F +++  +    SF  VS+  AL+  +VI+       +H
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSF---SFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
            L I+S    N+ V  A++DMY KCGA+  A  LFD M  R   +WN +I     +    
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEG 442

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
             +  F  ML    +P++ T+   + AC+       G+     + K  G+   M    A+
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKS-GMGLKMFVGSAL 501

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL--DPD 642
           VD+  + G + EA     ++  E  +  + A++    + K  E  ++  + + E+  +PD
Sbjct: 502 VDMYSKCGMMEEAEKIHYRLE-EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPD 560

Query: 643 EGGYHVLL 650
              Y  +L
Sbjct: 561 NFTYATVL 568


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 340/569 (59%), Gaps = 1/569 (0%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL   A    L  GKA H   +  G  + +  S  L++MY+KCG V+ AR VFD M SR+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +VSWN+MI +  + G   EA+ +  +M  +G   +  TI   L ACA    L     +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              +  +  +V +  +L+ +Y+KC  +  A  +F  +  +++V+W++M  GY QN    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F K     +K D F M SVI A A L+ +   K ++AL+ +S F  N+FV ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG +  +  +F  + +R+V  WN MI G   H      + LF KM +    PND+T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  +SAC H GLV++G  YF  + K++ + P + HY  MVD L RAG++ EA+D I K+
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P     +++G++L +C+ H N+EL E AA +LF+++P   G ++LL+N+YAA   WD++A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           K+R ++++  ++K  G S +E+K++VH F  G   HP+   IY+ L  ++DE++  GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 725 DT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +T + +H V + +++ LL  HSEKLA   GLL   P + I I KNLR+CGDCH+  K  S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
               R++IVRD +RFH FKNG CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 209/380 (55%), Gaps = 2/380 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +LK+C     + +GK  H Q+++ G   DL     ++NMY+KCG ++ A ++FD MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSWNT++    QNG    ALDL+ +M  EG      TI S+L A A   +L   + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           +A++A  D  V V+TAL+D+YAKCG ++ A  VF+ M  R+VV+W+SM A YV+    E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F+K  + G++     +   + ACA L  +  G  V+ LL +    +++ + +SLI 
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY+KC  ++ +  +F  ++ + +V WNAMI G +++ R  E +  F KM+   + P+  T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 444 MVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
            VSV+ A   + +++   K+   +        NVF  + ++D  ++ G +  A  L   +
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 503 N-ERHVTTWNVMIDGYGTHG 521
                 + W  ++    THG
Sbjct: 430 PFNASASMWGSLLASCRTHG 449



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 193/365 (52%), Gaps = 2/365 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+  GL    L    L++++ K  S+  A +VF+ +P +    ++TM+    +    ++A
Sbjct: 90  ILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEA 149

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +  L++M+ +      +  + +L  C     +   + +H   I     L++F  T ++++
Sbjct: 150 LDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDV 209

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG +++A  +F+ MP+R +V+W+++ AG+ QN   E AL L  +  E G + D   +
Sbjct: 210 YAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLM 269

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S++ A A + ++  GK V+    ++GF S + V+++L+DMYAKCG +E +  VF  ++ 
Sbjct: 270 SSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEK 329

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           RNVV WN+MI+         E M +F+KM   G+ P +VT +  L AC  +G +++G   
Sbjct: 330 RNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKY 389

Query: 363 HKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNG 420
             L+  +  L  +V   + ++   S+  ++  A D+ SKL      S W +++     +G
Sbjct: 390 FDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449

Query: 421 RVNEA 425
            +  A
Sbjct: 450 NLELA 454



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 40/362 (11%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           + E L  CA    L +G   H  +  + L TD+  +N LI+MYSKC  VD A  +F ++ 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            ++LVSWN MI    QNG  NEAL+   +M+ +      FT+ SV+ A A    +   + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA  I++  + NVFV TAL+D+YAKCG +  A  +F+ M +R V TW+ M  GY  + +
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD------YGIEP 576
            + A+ LF K  E   K +       I AC+    + EG      L K       +    
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASS 306

Query: 577 VMDHYG------------------------AMVDLLGRAGRLNEA---WDFIQKMPIEPG 609
           ++D Y                         AM+  L R  R  E    ++ +Q+M + P 
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              F ++L AC     V+ G+K     F+L   E   H L  N++  + M D L++   I
Sbjct: 367 DVTFVSVLSACGHMGLVKKGQK----YFDLMTKE---HHLAPNVFHYSCMVDTLSRAGQI 419

Query: 670 ME 671
            E
Sbjct: 420 FE 421


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/658 (39%), Positives = 368/658 (55%), Gaps = 84/658 (12%)

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           VSWN+IV+ ++       A+ L   M    G   D + +V+ILP    +G          
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFF-------- 75

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
                       V  ALVDMYAKCG++E A  VF+ M+ ++VV+WN+M+  Y + G  E+
Sbjct: 76  ------------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFED 123

Query: 324 AMRIFQKMLDQGVE-----------------------------------PTNVTIMEALH 348
           A+ +F KM ++ +E                                   P  VT+M  L 
Sbjct: 124 ALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLS 183

Query: 349 ACADLGDLERGIFVHKLLDQLKL-------GTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           ACA +G L  G   H    +  L         D+++ N+LI MY+KCK ++ A  +F ++
Sbjct: 184 ACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEI 243

Query: 402 --QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN--IKPDSFTMVSVIPALAELSVI 457
             + + +V+W  MI GYAQ+G  N AL  F +M   +  I P+ FT+  V+ A A L+ +
Sbjct: 244 CPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAAL 303

Query: 458 RYAKWIHALVIR-SCFEKNV-FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
           ++ K IHA V+R S  + +V FV   LIDMY+K G V TA+ +FD M++R+  +W  ++ 
Sbjct: 304 KFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLT 363

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
           GYG HG   AA+ L           + ITFL  + ACSHSG+V+ GI  F  + KD+ ++
Sbjct: 364 GYGMHG---AALVL-----------DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVD 409

Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
           P ++HY  M DL GRAGRL EA   I  M +EP   V+ A+L AC+ H N EL E AA +
Sbjct: 410 PGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKK 469

Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
           L EL  D  G + LL+NIYA A  W  +A++R +M++ G++K PG S V+ +  + +FY 
Sbjct: 470 LLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYV 529

Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
           G   H QS++IY  L  LI  IKA GYVP TN S+HDV+D  + + L  HSEKLA+A+ +
Sbjct: 530 GDRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAI 589

Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L   PG+ I I KNLR+CGD H+A  YIS++   EII+RD  RFH FKNG CSC  YW
Sbjct: 590 LTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 203/422 (48%), Gaps = 65/422 (15%)

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           L V+GF L  F    +V+MYAKCG++E+A K+F+RM  +D+V+WN +V G++QNG  E A
Sbjct: 66  LPVSGF-LGFFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDA 124

Query: 224 LDLVTRMHEE----------------GRRG-------------------DFITIVSILPA 248
           L L  +M EE                 +RG                   + +T++S+L A
Sbjct: 125 LSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSA 184

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVN-------VSTALVDMYAKCGRVETARLVFDGM- 300
            A+VG+L  GK  H Y+++       N       V  AL+DMYAKC  +E AR +FD + 
Sbjct: 185 CASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEIC 244

Query: 301 -KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM--LDQGVEPTNVTIMEALHACADLGDLE 357
            K R+VV+W  MI  Y + G+   A+++F +M  +D  + P + TI   L ACA L  L+
Sbjct: 245 PKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALK 304

Query: 358 RGIFVHK-LLDQLKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            G  +H  +L + ++ +DV  + N LI MYSK   VD A  +F  +  +  VSW +++ G
Sbjct: 305 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTG 364

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHALVIRSCFEK 474
           Y  +G                +  D  T + V+ A +   ++ R     + +      + 
Sbjct: 365 YGMHGAA--------------LVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDP 410

Query: 475 NVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
            V     + D++ + G +  A R + DM  E     W  ++    TH   + A     K+
Sbjct: 411 GVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKL 470

Query: 534 LE 535
           LE
Sbjct: 471 LE 472



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 207/440 (47%), Gaps = 75/440 (17%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA-- 135
           LV ++ K   + DA++VFE +  K    ++ M+ GY++    +DA+S   +MR + +   
Sbjct: 80  LVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELD 139

Query: 136 ---------------------------------PVVYNYTYLLKVCGDVGEIRRGKEIHG 162
                                            P V     LL  C  VG +  GKE H 
Sbjct: 140 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 199

Query: 163 ---QLIVNGF----SLDLFAMTGVVNMYAKCGQIEEAYKMFDRM--PERDLVSWNTIVAG 213
              + I+ G     + DL  +  +++MYAKC  +E A  MFD +   +RD+V+W  ++ G
Sbjct: 200 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 259

Query: 214 FAQNGFAELALDLVTRMHEEGR---RGDFITIVSILPAVANVGSLRIGKAVHGYAM-RAG 269
           +AQ+G A  AL L + M +        DF TI  +L A A + +L+ GK +H Y + R+ 
Sbjct: 260 YAQHGDANHALQLFSEMFKIDNCIVPNDF-TISCVLMACARLAALKFGKQIHAYVLRRSR 318

Query: 270 FDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
            DS ++ V+  L+DMY+K G V+TA++VFD M  RN VSW S++  Y         M   
Sbjct: 319 IDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY--------GMHGA 370

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSK 387
             +LD       +T +  L+AC+  G ++RGI   +++     +   V     +  ++ +
Sbjct: 371 ALVLD------GITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGR 424

Query: 388 CKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD---SFT 443
             ++  A  + + +  + T V W A++   A     NE L  F   +   +K D   ++T
Sbjct: 425 AGRLCEATRLINDMSMEPTPVVWIALL--SACRTHSNEELAEFAAKKLLELKADNDGTYT 482

Query: 444 MVSVIPALA----ELSVIRY 459
           ++S I A A    +++ IRY
Sbjct: 483 LLSNIYANARRWKDVARIRY 502


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/593 (37%), Positives = 359/593 (60%), Gaps = 4/593 (0%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           L++T+++GY+  A +   +    +M    V P  + + ++LK C D  E+R+G+E+HG +
Sbjct: 9   LWNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF-AELA 223
           +  GF  D+F    +++ Y  CG + +A ++FD MPE+DLVSWNT++  F+ NG+    A
Sbjct: 68  VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDA 127

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           LD+   M +EG + + ITI S LP +  +   + G+ VHG ++R G +S + ++ +L+DM
Sbjct: 128 LDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDM 187

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           YAK G    A  VF  + ++NVVSWN+MIA + +      A+ + ++M D G  P +VT 
Sbjct: 188 YAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTF 247

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              L ACA +G +  G  +H     +    D+ ++N+L  MY+K   +  A ++F     
Sbjct: 248 TNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SL 306

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           +  VS+N +I+G++Q    +E+L+ F +M+   +K D+ + +  + A A L+ I+  K I
Sbjct: 307 RDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEI 366

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
           H  ++R  F  ++FV  +L+D Y KCG +G AR +FD M  + V +WN MI GYG  G  
Sbjct: 367 HGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGEL 426

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
             A++LF  M +   + + ++F+  +SACSH GL+E+G  YF  LK   GIEP   HY  
Sbjct: 427 DTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYAC 485

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           MVDLLGRAG + EA + I+ +PI P   ++GA+LGAC+I+ N+EL   AA  LFEL P+ 
Sbjct: 486 MVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEH 545

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
            GY+ LL+N+YA    WD+  ++R +M+ +G++K+PGCS V++  + H+F  G
Sbjct: 546 SGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVG 598



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 273/580 (47%), Gaps = 55/580 (9%)

Query: 29  SQRAYIPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKY 85
           +Q   I  R   H    +L+ C    E+R+   +   ++K G          L+S +   
Sbjct: 30  NQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNC 89

Query: 86  NSLSDAARVFEPIPDKLDALYHTMLKGYAKFA-SLDDAVSFLIRMRYDDVAPVVYNYTYL 144
             L DA RVF+ +P+K    ++TM+  ++       DA+     M  + + P     +  
Sbjct: 90  GGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSF 149

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           L V  ++   + G+E+HG  I  G   D+F    +++MYAK G   EA  +F ++  +++
Sbjct: 150 LPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNV 209

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSWN ++A FAQN F  +A+ LV +M + G   + +T  ++LPA A +G +R GK +H  
Sbjct: 210 VSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHAR 269

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           ++  G    + VS AL DMYAK G ++ AR VFD    R+ VS+N +I  + +  +  E+
Sbjct: 270 SIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSES 328

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           + +F +M   G++  NV+ M AL ACA+L  +++G  +H  L +      + + NSL+  
Sbjct: 329 LSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDF 388

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y+KC ++  A +IF ++  K + SWN MILGY   G ++ A++ F  MR  +++ DS + 
Sbjct: 389 YTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSF 448

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
           ++V+ A +                                     G +   R  FD +  
Sbjct: 449 IAVLSACSH-----------------------------------GGLLEKGRKYFDELKA 473

Query: 505 RHVTT----WNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG---L 557
           R +      +  M+D  G  GL + A EL   +   P  P+   +   + AC   G   L
Sbjct: 474 RGIEPTQMHYACMVDLLGRAGLMEEAAELIKGL---PIVPDANIWGALLGACRIYGNLEL 530

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
                 +   LK ++       +Y  + ++    GR +EA
Sbjct: 531 AAWAAEHLFELKPEHS-----GYYTLLSNMYAETGRWDEA 565


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/685 (35%), Positives = 383/685 (55%), Gaps = 21/685 (3%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           ++   ++ C D   +     IH ++   G     +    +V M AK G + EA  +FD +
Sbjct: 46  SFAAAIRSCKDSNSV---SIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
             +++ SWN I++ +A  G    AL L  +M        F T +S   A +++G L+ G+
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATALS---ACSSLGDLQRGR 159

Query: 260 AVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
            +H     + G    V + TA+  MYAKCG + TA+ VFD + ++NVVSWN++IAAY + 
Sbjct: 160 EIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQS 219

Query: 319 GNPE-EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG---TD 374
           G+   +A+ +F+KM + GV P   T +  L AC D+  LE+   +H  + +  L     D
Sbjct: 220 GHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK---IHARIVETGLQFDVRD 276

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V + N+L++MY+KC  ++ A DIF K+Q +  VS N MI  +AQ G   E++  F +M  
Sbjct: 277 VGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDL 336

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI-----RSCFEKNVFVMTALIDMYAKC 489
           + +  D  T  SVI A +    + + K IH  V+     R C   NV V TAL+ MY KC
Sbjct: 337 EGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKC 396

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G +  A+A+F  M  ++  +WN M+      G G  A            + +  +F+  +
Sbjct: 397 GTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVL 456

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
            ACSHSG++E    +F  +  D+ + P  ++Y  MVDLL R+GRL +A + +  MP  P 
Sbjct: 457 IACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPD 516

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              +  +LG C++  ++E    AA + F L+P     + LL+++Y+A    D+L ++R+ 
Sbjct: 517 AIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSS 576

Query: 670 MEKKGLQK-TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           M+++GL+K  PG S++E+   VH F +G + HPQ  +I   L+ L  E+K AG+VP T+ 
Sbjct: 577 MKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDG 636

Query: 729 -IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
            +HD++   +E +L+ HSEKLA+AFGL+++  G  + + KNLRVC DCH A K IS +  
Sbjct: 637 VVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRS 696

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           R I VRD +RFH F++G CSCGDYW
Sbjct: 697 RVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 267/528 (50%), Gaps = 35/528 (6%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I ++GL         LV +  K+ SL +A  +F+ I  K    ++ ++  YA       A
Sbjct: 67  ITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTA 126

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVN 181
           +    +M   DV P    +   L  C  +G+++RG+EIH ++  + G    +   T + +
Sbjct: 127 LHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFS 183

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA-ELALDLVTRMHEEGRRGDFI 240
           MYAKCG +  A  +FDR+P +++VSWN ++A +AQ+G +   ALDL  +M E G R    
Sbjct: 184 MYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRA 243

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAG--FD-SIVNVSTALVDMYAKCGRVETARLVF 297
           T V +L A  +V SL   + +H   +  G  FD   V V  AL++MYAKCG +E AR +F
Sbjct: 244 TFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIF 300

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
             M+ R+ VS N MIA + + G  +E++++F++M  +G+   + T    + AC+  G LE
Sbjct: 301 RKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALE 360

Query: 358 RGIFVHKLLDQLKLGTDVSMTN-----SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAM 412
            G  +HK + +  LG    + N     +L+SMY KC  +++A  +F  +  K  VSWNAM
Sbjct: 361 FGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAM 420

Query: 413 ILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF 472
           +   A  G+ +EA  +      + ++ DS + +SV+ A +   ++  A + H  ++ S F
Sbjct: 421 LAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVA-YDHFQLMLSDF 479

Query: 473 EKNVFVMTA-----LIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG----L 522
           +    V  A     ++D+ A+ G +G A  L + M        W  ++ G    G     
Sbjct: 480 D---LVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENA 536

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
             AA + FN  LE P      T L ++   S +G  +E +   +S+K+
Sbjct: 537 ASAAEQAFN--LE-PQNTAPYTLLSSLY--SATGKKDELVELRSSMKE 579


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/731 (33%), Positives = 407/731 (55%), Gaps = 34/731 (4%)

Query: 37  RIYRHPSALLLEVCTSLKELRRILPLIIKSGLCD--QHLFQTKLVSLFCKYNSLSDAARV 94
           R    P+A       SL  +R I    ++  L D         L++ + +   L+ A  +
Sbjct: 57  RFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALAL 116

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE- 153
           F+ +P +    +++++     F     A+  L  M  +      +    +L  C  + E 
Sbjct: 117 FDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAED 176

Query: 154 IRRGKEIHGQLIVNGF--SLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-----PERDLVS 206
           +R G+E H   + NGF    + FA   +++MYA+ G +++A  +F  +     P   +V+
Sbjct: 177 LRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVT 236

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           WNT+V+   Q+G    A++++  M   G R D +T  S LPA + +  L +G+ +H Y +
Sbjct: 237 WNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVL 296

Query: 267 R-AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEE 323
           + A   +   V++ALVDMYA   RV  ARLVFD + +  R +  WN+MI  Y + G  E+
Sbjct: 297 KDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDED 356

Query: 324 AMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           A+ +F +M  + GV P+  TI   L +CA          VH  + +  +  +  + N+L+
Sbjct: 357 ALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALM 416

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN------ 436
            +Y++   +D A  IF+ ++ + +VSWN +I G    G + +A     +M+ +       
Sbjct: 417 DLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAA 476

Query: 437 ------------IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
                       + P++ T+++++P  A L+     K IH   +R   + +V V +AL+D
Sbjct: 477 TEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVD 536

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG-PTKPNDI 543
           MYAKCG +  +RA+FD +  R+V TWNV+I  YG HGLG  A+ LF++M+     KPN++
Sbjct: 537 MYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEV 596

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF+ A++ACSHSG+V+ G+  F S+K+++G+EP  D +   VD+LGRAGRL+EA+  I  
Sbjct: 597 TFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISS 656

Query: 604 M-PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
           M P E  ++ + + LGAC++H+NV LGE AA RLFEL+PDE  ++VLL NIY+AA +W+K
Sbjct: 657 MEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAAGLWEK 716

Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
            ++VR+ M ++G+ K PGCS +EL   +H F +G + HP+S  ++  ++ L + ++  GY
Sbjct: 717 SSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRDQGY 776

Query: 723 VPDTNSIHDVE 733
            PDT  I  VE
Sbjct: 777 TPDTTLIKPVE 787


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/746 (34%), Positives = 396/746 (53%), Gaps = 27/746 (3%)

Query: 71   QHLFQTKLV-SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
            +++F   L+ S +     L  A  +F   P +    +  M++ +A      DA+S    M
Sbjct: 286  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345

Query: 130  RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
              + V P     T +L + G          +H   I  G    +F    +++ Y K G +
Sbjct: 346  LGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 400

Query: 190  EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
              A ++F  M ++D V++N ++ G ++ G    AL L   M   G         S  P  
Sbjct: 401  AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG--------YSRHP-- 450

Query: 250  ANVGSLRIGKAVHGYAMRAGFDSIVNV--STALVDMYAKCGRVETARLVFDGMKSRNVVS 307
                 L + +  H    R+   S++NV  + +L+D Y+KC  ++  R +FD M  R+ VS
Sbjct: 451  -----LHLLQYSHS---RSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS 502

Query: 308  WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
            +N +IAAY         +R+F++M   G +   +     L     L D+  G  +H  L 
Sbjct: 503  YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 562

Query: 368  QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
             L L ++  + N+LI MYSKC  +D A   FS    K+ +SW A+I GY QNG+  EAL 
Sbjct: 563  LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 622

Query: 428  YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
             F  MR   ++PD  T  S+I A + L++I   + +H+ +IRS ++ +VF  + L+DMYA
Sbjct: 623  LFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYA 682

Query: 488  KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
            KCG +  A   FD M ER+  +WN +I  Y  +G  K A+++F  ML     P+ +TFL 
Sbjct: 683  KCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLS 742

Query: 548  AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
             ++ACSH+GL +E + YF  +K  Y I P  +HY  ++D LGR G  ++    + +MP +
Sbjct: 743  VLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 802

Query: 608  PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
                ++ ++L +C+IH N EL   AA++LF ++P +   +V+L+NIYA A  W+  A V+
Sbjct: 803  ADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 862

Query: 668  TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD-T 726
             IM  +G++K  G S VE+K +++SF S     P    I   L+ L  E+   GY PD T
Sbjct: 863  KIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 922

Query: 727  NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
             ++H V+  ++   L  HSE+LAIAF L+N+  G+ I I KNL  C DCH   K IS + 
Sbjct: 923  CALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIV 982

Query: 787  GREIIVRDMHRFHCFKNGVCSCGDYW 812
             R+IIVRD  RFH FK+GVCSCGDYW
Sbjct: 983  NRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 196/421 (46%), Gaps = 29/421 (6%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQ-TKLVSLFCKYNSLSDAA 92
           IP R+    + L L  CT    +  + P  IK GL D H+F    L+  +CK+  L+ A 
Sbjct: 351 IPDRVTV-TTVLNLPGCT----VPSLHPFAIKFGL-DTHVFVCNTLLDAYCKHGLLAAAR 404

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR---YDDVAPVVYNYTYLLKVCG 149
           RVF  + DK    Y+ M+ G +K      A+     MR   Y      +  Y++      
Sbjct: 405 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRST 464

Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
            V                   L++F    +++ Y+KC  +++  ++FD MPERD VS+N 
Sbjct: 465 SV-------------------LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 505

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           I+A +A N  A   L L   M + G     +   ++L    ++  + IGK +H   +  G
Sbjct: 506 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 565

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
             S   +  AL+DMY+KCG ++ A+  F     ++ +SW ++I  YV+ G  EEA+++F 
Sbjct: 566 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 625

Query: 330 KMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK 389
            M   G+ P   T    + A + L  +  G  +H  L +    + V   + L+ MY+KC 
Sbjct: 626 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 685

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +D A   F ++  +  +SWNA+I  YA  G    A+  F  M      PDS T +SV+ 
Sbjct: 686 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 745

Query: 450 A 450
           A
Sbjct: 746 A 746



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 204/477 (42%), Gaps = 53/477 (11%)

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF----------- 214
           V GF +  + +   +      G +  A  MFD+MP +++ S N I++ +           
Sbjct: 250 VTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQH 309

Query: 215 --------------------AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
                               A  G    AL L   M  EG   D +T+ ++L    N+  
Sbjct: 310 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL----NLPG 365

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
             +  ++H +A++ G D+ V V   L+D Y K G +  AR VF  M  ++ V++N+M+  
Sbjct: 366 CTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 424

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
             + G   +A+++F  M   G     + +++  H+        R   V           +
Sbjct: 425 CSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHS------RSRSTSV----------LN 468

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           V + NSL+  YSKC  +D    +F ++  +  VS+N +I  YA N      L  F +M+ 
Sbjct: 469 VFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQK 528

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
                      +++     L  +   K IHA ++         +  ALIDMY+KCG +  
Sbjct: 529 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 588

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A++ F   +E+   +W  +I GY  +G  + A++LF+ M     +P+  TF   I A S 
Sbjct: 589 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSS 648

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
             ++  G    + L +  G +  +     +VD+  + G L+EA     +MP    I+
Sbjct: 649 LAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSIS 704



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 12/333 (3%)

Query: 42  PSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI 98
           P A +L V  SL ++   ++I   ++  GL  + L    L+ ++ K   L  A   F   
Sbjct: 537 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 596

Query: 99  PDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGK 158
            +K    +  ++ GY +    ++A+     MR   + P    ++ ++K    +  I  G+
Sbjct: 597 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 656

Query: 159 EIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG 218
           ++H  LI +G+   +F+ + +V+MYAKCG ++EA + FD MPER+ +SWN +++ +A  G
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716

Query: 219 FAELALDLVTRMHEEGRRGDFITIVSILPAVANVG-SLRIGKAVHGYAMRAGFDSIVNVS 277
            A+ A+ +   M   G   D +T +S+L A ++ G +    K  H    +          
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHY 776

Query: 278 TALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
             ++D   + G     + +   M  + + + W S++ +    GN E A     K+   G+
Sbjct: 777 ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GM 834

Query: 337 EPTNVT---IMEALHACADLGDLERGIFVHKLL 366
           EPT+ T   I+  ++A A  G  E    V K++
Sbjct: 835 EPTDATPYVILSNIYARA--GQWEDAACVKKIM 865


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/534 (41%), Positives = 336/534 (62%), Gaps = 6/534 (1%)

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L++MY K G +  A+ VFD M  RNVVSW +MI+AY      ++A+     ML +GV P 
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
             T    L AC  L +L +   +H  + ++ L +DV + ++LI +YS+  +++ A  +F 
Sbjct: 66  MFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           ++    LV W+++I G+AQN   +EAL  F +M+         T+ SV+ A   L+++  
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + +H  V++  +++++ +  AL+DMY KCG++  A A+F  M E+ V +W+ MI G   
Sbjct: 183 GRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           +G  K A++LF  M     KPN +T +  + ACSH+GLVEEG++YF S+K+ +GI+P  +
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HYG M+DLLGRAGRL+EA D I +M  EP    + A+L AC++H+NV++   AA ++  L
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRL 360

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP + G +VLL+NIYA    W+ +A+VR  M  +G++K PGCS +E+  ++H+F  G   
Sbjct: 361 DPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRS 420

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HPQ + I   L  LI ++   GYVPDTN +  D+E    ++ L  HSEKLAI FGL++  
Sbjct: 421 HPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLP 480

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            G TI IRKNLR+CGDCH  TK ++ +  R I++RD  R+H F++G+CSCGD+W
Sbjct: 481 RGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 191/338 (56%), Gaps = 7/338 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L++++ K+  L DA  VF+ +PD+    + TM+  Y+     D A+ FL+ M  + V P 
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           ++ Y+ +L+ C  +  +R   ++H  +I  G   D+F  + ++++Y++ G++E A ++FD
Sbjct: 66  MFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M   DLV W++I+AGFAQN   + AL L  RM   G      T+ S+L A   +  L +
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VH + ++   D I+N   AL+DMY KCG +E A  VF  M  ++V+SW++MIA   +
Sbjct: 183 GRQVHVHVLKYDQDLILN--NALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVS 376
            G  +EA+++F+ M   G++P  VTI+  L AC+  G +E G+ + H + +   +     
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
               +I +  +  ++  A D+ ++++ +   V+W A++
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALL 338



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 202/390 (51%), Gaps = 38/390 (9%)

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE 233
           F +  ++NMY K G + +A  +FD+MP+R++VSW T+++ ++     + AL+ +  M  E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           G R +  T  S+L A   + +LR    +H   ++ G DS V V +AL+D+Y++ G +E A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             VFD M + ++V W+S+IA + +  + +EA+R+F++M   G      T+   L AC  L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             LE G  VH  +  LK   D+ + N+L+ MY KC  ++ A  +F ++  K ++SW+ MI
Sbjct: 178 ALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            G AQNG   EAL  F  M+   IKP+  T+V V+ A +   ++               E
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLV---------------E 280

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
           + ++   ++ +++     +   R             +  MID  G  G    AV+L N+M
Sbjct: 281 EGLYYFHSMKELF----GIDPGR-----------EHYGCMIDLLGRAGRLSEAVDLINEM 325

Query: 534 LEGPTKPNDITFLCAISACSHSGLVEEGIH 563
                +P+ +T+   ++AC     V+  IH
Sbjct: 326 ---ECEPDAVTWRALLNACRVHRNVDVAIH 352



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 151/289 (52%), Gaps = 4/289 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           +L  C  L  LR++   IIK GL      ++ L+ ++ ++  L +A RVF+ +      +
Sbjct: 72  VLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVV 131

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + +++ G+A+ +  D+A+    RM+           T +L+ C  +  +  G+++H  ++
Sbjct: 132 WSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVL 191

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
              +  DL     +++MY KCG +E+A  +F RM E+D++SW+T++AG AQNG+++ AL 
Sbjct: 192 --KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALK 249

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALVDMY 284
           L   M   G + +++TIV +L A ++ G +  G    H      G D        ++D+ 
Sbjct: 250 LFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLL 309

Query: 285 AKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            + GR+  A  + + M+   + V+W +++ A     N + A+   +++L
Sbjct: 310 GRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
           F++  LI+MY K G +  A+ +FD M +R+V +W  MI  Y    L   A+E    ML  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
             +PN  T+   + AC   GL      +   +K   G++  +    A++D+  R G L  
Sbjct: 61  GVRPNMFTYSSVLRAC--DGLFNLRQLHCCIIK--IGLDSDVFVRSALIDVYSRWGELEN 116

Query: 597 AWDFIQKM 604
           A     +M
Sbjct: 117 ALRVFDEM 124


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 344/573 (60%), Gaps = 6/573 (1%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + ++L AV +  S+   + +H    ++       +   LV  Y K G  E A  +FD M 
Sbjct: 42  VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGI 360
            +++VSWNS+I+ +        ++  F  M  +  V+P  VTI+  + AC   G L+ G 
Sbjct: 102 HKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGK 157

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
           ++H    ++    +V + NSLI+MY K   +  A  +F  +     VSWN++I     NG
Sbjct: 158 YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNG 217

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              E ++YF KMR   I+ D  T+++++ A   L V + A+ IH L+  + F   + + T
Sbjct: 218 CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT 277

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+D YAK G +  +  +F  +       W  M+ GY  HGLG+ A++LF  M     +P
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEP 337

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + +TF   +SACSHSGLV EG  YF  + + YGIEP +DHY  MVDLLGR G LN+A++ 
Sbjct: 338 DHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEV 397

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           IQ MP+EP   V+GA+LGAC++H N+ELG++ A  L  ++P +   +++L+N+Y+A+  W
Sbjct: 398 IQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSW 457

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
              AKVR +++++GL++TPG S +E  N+ H F+ G   HP++++IY+ LE L+ +I+ A
Sbjct: 458 KDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKA 517

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           GY   T  +  DVE+ V+E++++ HSEKLAIAFGLL S  G  + I KNLR+CGDCH+  
Sbjct: 518 GYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTA 577

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K ISL+  R II+RD  RFH F +G CSC DYW
Sbjct: 578 KLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 215/434 (49%), Gaps = 18/434 (4%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEV--CTSLKELRRILPLIIKSGLCDQHLFQTKL 78
           LH   H + Q A  P  I    SALL+ V  C S+   R I   + KS L        +L
Sbjct: 25  LHRSFHLVRQCA-TPEAIV---SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQL 80

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPV 137
           V+ + K     DA ++F+ +P K    +++++ G+++   L  +++    M+++  V P 
Sbjct: 81  VTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPN 138

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 ++  C   G +  GK IHG  I  G +L++     ++NMY K G +  A ++F+
Sbjct: 139 EVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFE 196

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            +P+ + VSWN+I+A    NG A   +D   +M   G   D  TI+++L A  ++G  ++
Sbjct: 197 AIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKL 256

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
            +++HG     GF + + ++TAL+D YAK GR+  +  VF  +   + V+W +M+A Y  
Sbjct: 257 AESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAA 316

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL-KLGTDVS 376
            G   EA+++F+ M ++G+EP +VT    L AC+  G +  G     ++ ++  +   V 
Sbjct: 317 HGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVD 376

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRV---NEALNYFCKM 432
             + ++ +  +C  ++ A ++   +  +     W A++     +G +    E   +   M
Sbjct: 377 HYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM 436

Query: 433 RSKNIKPDSFTMVS 446
               + P ++ M+S
Sbjct: 437 EP--LDPRNYIMLS 448


>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 615

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/583 (39%), Positives = 353/583 (60%), Gaps = 16/583 (2%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM-----YAKCGRVETARLVFDG 299
           +LP +    +LR    +H  A+++G  +     T L+ +      AK  ++  AR VFD 
Sbjct: 34  LLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDR 93

Query: 300 MKSRNVVSW-NSMIAAYVE-----GGNP--EEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
           +     V W N+++  Y       G  P  EEA R+F +ML++GV P   T +  L ACA
Sbjct: 94  IPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACA 153

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
                E G   H +  ++       +  +LI+MY++C     A  +F ++ G+ +VS+NA
Sbjct: 154 AARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNA 213

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI    ++ R  EAL  F +M++K +K  S T++SV+ A A L  +   +WIH  V +  
Sbjct: 214 MITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQ 273

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
            +  V V TALIDMY KCG++  A ++F  M  R    W+VMI  Y  H  G+ A+ LF 
Sbjct: 274 LDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFE 333

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M +   KP+D+TFL  + ACSHSGLV EG+ YF S+ +++G+ P + HYG + DLL R+
Sbjct: 334 EMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARS 392

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G+L+ A++FI ++PI+P   ++  +L AC    + +LG++   R+ ELD   GG +V+ +
Sbjct: 393 GQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFS 452

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
           N+ A    W+++ +VR +M +KG+ K PGCS +E+ N VH F++G  +HP+S      ++
Sbjct: 453 NLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVD 512

Query: 712 TLIDEIKAAGYVPDTNSIHDVEDYVQENLLS--SHSEKLAIAFGLLNSSPGSTIHIRKNL 769
            +I+++K AGYVP+T+ +  VE   +E  +S   HSEKLAI+FGLLN+SPG+T+ + KNL
Sbjct: 513 GVIEQLKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNL 572

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           RVC DCH+  K +S+V  R II+RD++RFH F++GVCSCGDYW
Sbjct: 573 RVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 209/404 (51%), Gaps = 14/404 (3%)

Query: 40  RHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSL-----FCKYNSLSDAARV 94
           +HP    L  CT+L+ L ++    +KSGL     F T+L++L       K   LS A +V
Sbjct: 31  QHPLLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQV 90

Query: 95  FEPIPDKLDAL-YHTMLKGYAKFASL-------DDAVSFLIRMRYDDVAPVVYNYTYLLK 146
           F+ IP   D + Y+T+L+GYA+ ++        ++A    +RM  + VAP  Y +  LLK
Sbjct: 91  FDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLK 150

Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
            C        G++ HG  +  G +   + +  ++NMYA+CG    A  MF R+    +VS
Sbjct: 151 ACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVS 210

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
           +N ++    ++     AL L   M  +G +   +T++S+L A A +G+L +G+ +H Y  
Sbjct: 211 YNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVR 270

Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
           +   DS+V V+TAL+DMY KCG +E A  VF GM+SR+  +W+ MI AY       EA+ 
Sbjct: 271 KVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAIS 330

Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
           +F++M  QG++P +VT +  L+AC+  G +  G+     + +  L   +     +  + +
Sbjct: 331 LFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLA 390

Query: 387 KCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGRVNEALNYF 429
           +  ++DRA +   +L  K T + W  ++      G  +     F
Sbjct: 391 RSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVF 434



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 186/361 (51%), Gaps = 9/361 (2%)

Query: 184 AKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQ-------NGFAELALDLVTRMHEEGR 235
           AK  Q+  A ++FDR+P   D+V +NT++ G+A+          AE A  +  RM EEG 
Sbjct: 79  AKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGV 138

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
             D  T VS+L A A   +   G+  HG A++ G      V   L++MYA+CG    AR 
Sbjct: 139 APDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAART 198

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           +F  +    VVS+N+MI A V    P EA+ +F++M  +G++ T+VT++  L ACA LG 
Sbjct: 199 MFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGA 258

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           LE G ++H+ + +++L + V +  +LI MY KC  ++ A  +F  ++ +   +W+ MI+ 
Sbjct: 259 LELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVA 318

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           YA +    EA++ F +M+ + IKPD  T + V+ A +   ++         +        
Sbjct: 319 YANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPG 378

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKML 534
           +     + D+ A+ G +  A    D +  +     W  ++   G+ G      ++F ++L
Sbjct: 379 IKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERIL 438

Query: 535 E 535
           E
Sbjct: 439 E 439


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 338/561 (60%), Gaps = 7/561 (1%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           GK +H + +  GF S   +   LV+MY KCG ++ A+ VF     RNV SW  M+AA+  
Sbjct: 76  GKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAH 135

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G+  +A+ + + M  +G+ P ++T +E L A A L  L+RG  +H+ +       D+ +
Sbjct: 136 NGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFV 195

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N LI+MY+KC+ +  A  +F  L  +++++W A++  YA NG   +AL  F  M    +
Sbjct: 196 ANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGV 255

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           +P   T V+V+   A+++V    + +H  VI +  E NV V  ALI+MY KC +   AR 
Sbjct: 256 EPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCASPDEARK 314

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-----TKPNDITFLCAISAC 552
           +FD M  + + TWN MI  YG +G G  A+E++ +M E          +DITF+  + AC
Sbjct: 315 VFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFAC 374

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GLV++    ++S+  DYG +P     G ++DLLGRAG L+EA +FI  MP  P  T+
Sbjct: 375 SHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTI 434

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +  +LGAC  H +VE   +AA+R+  L P + G +V L+N+YA A  WD +A++R +M++
Sbjct: 435 WTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQ 494

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
           +G+ K  G S +E+   +H F +G T HP+ + IY  L  +   I+  GYVPD  ++ H+
Sbjct: 495 RGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHN 554

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
                +E +   HSE+LAIAFG+++S  G+ + I KNLRVC DCH+ATK IS  +GR+II
Sbjct: 555 AAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKII 614

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFH F+NG CSC DYW
Sbjct: 615 VRDANRFHEFRNGSCSCEDYW 635



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 236/477 (49%), Gaps = 25/477 (5%)

Query: 78  LVSLFCKYNSL----SDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
           LV L C+  +L    + +AR F P+ +K +     + +       L DAV  L       
Sbjct: 2   LVRLKCRIRALRWVSTSSARFF-PLTEKEEQQIDRLER-----LDLRDAVQLL---EDRS 52

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           V+P      + L+ CG    I  GK IH  +++ GF    +    +V MY KCG ++ A 
Sbjct: 53  VSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAK 112

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +F   P R++ SW  +VA FA NG    AL+L+  M  EG   + IT + +L AVA + 
Sbjct: 113 SVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALS 172

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
            L  G+A+H      GF + + V+  L++MYAKC  +  A  VF+ + SR+V++W +++A
Sbjct: 173 WLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVA 232

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
           AY   G   +A+++F  M   GVEPT VT +  +  CAD+     G  VH ++D  +   
Sbjct: 233 AYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDA-RSEA 291

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +V + N+LI+MY KC   D A  +F  +Q K +++WN+MI  Y QNG   +AL  + +M+
Sbjct: 292 NVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQ 351

Query: 434 SKN-----IKPDSFTMVSVIPALAELSVIR-YAKWIHALVIRSCFEKNVFVMTALIDMYA 487
                   I  D  T + V+ A +   +++   K   +++    F+        LID+  
Sbjct: 352 ESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLG 411

Query: 488 KCGAVGTARALFDMM--NERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           + G +  A    + M  +  H T W +++    TH   + A    ++++    +P D
Sbjct: 412 RAGWLDEAEEFINSMPYHPDH-TIWTILLGACITHADVERAARAADRIM--ALRPTD 465



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 158/309 (51%), Gaps = 6/309 (1%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
            ++ E +RI   I+  G          LV ++ K  SL  A  VF   P +    +  M+
Sbjct: 71  AAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMV 130

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
             +A      DA++ L  M  + ++P    +  LL     +  + RG+ +H ++   GF 
Sbjct: 131 AAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFL 190

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D+F    ++NMYAKC  + +A  +F+ +  R +++W  +VA +A NGF   AL +   M
Sbjct: 191 ADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLM 250

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
             +G     +T V+++   A++    IG+ VHG  + A  ++ V V  AL++MY KC   
Sbjct: 251 TLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCASP 309

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ-----GVEPTNVTIME 345
           + AR VFD M+ +++++WNSMIA Y + G   +A+ I+++M +      G+   ++T + 
Sbjct: 310 DEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIG 369

Query: 346 ALHACADLG 354
            L AC+  G
Sbjct: 370 VLFACSHAG 378



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           +  +++ P +  +   +      + I   K IH  ++   F+ + ++   L++MY KCG+
Sbjct: 48  LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGS 107

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAIS 550
           +  A+++F +   R+V +W +M+  +  +G    A+ L   M LEG + PN ITF+  + 
Sbjct: 108 LQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGIS-PNSITFIELLG 166

Query: 551 ACSHSGLVEEG 561
           A +    ++ G
Sbjct: 167 AVAALSWLDRG 177


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/714 (35%), Positives = 392/714 (54%), Gaps = 58/714 (8%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVA-PVVYNYTYLLKVCGDVGEIRRGKEIHG-Q 163
           Y +M+  + +   +D+A     R  +D V+ P VY YT ++      G  R  +  H  Q
Sbjct: 14  YQSMITDHLRNQRIDEA-----RTVFDKVSFPDVYLYTMMI-----TGYARNYRFDHALQ 63

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           L       D+ +   ++     C  +  A K+FD MPER +VSW T++ GF Q G  E+A
Sbjct: 64  LFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVA 123

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             L  +M        F  I                         A ++S++         
Sbjct: 124 EGLFYKM-------PFRDI-------------------------AAWNSMI--------- 142

Query: 284 YAKC--GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PT 339
           Y  C  GRVE    +F  M  RNV+SW SMI    + G  EEA+ +F++M+  GVE  PT
Sbjct: 143 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPT 202

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           + T    + ACA+   L +G+ +H  + +L    D  ++ +LI+ Y+ CK+++ +  +F 
Sbjct: 203 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 262

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
                 +V W A++ GY  N +  +AL  F +M  + + P+  +  S + +   L  + +
Sbjct: 263 GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDW 322

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            + IH   ++   E +VFV  +LI MY +CG +     +F  ++++++ +WN +I G   
Sbjct: 323 GREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQ 382

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           HG G  A+  FN+M+    +P++ITF   +SACSHSG+ ++G   F    ++   E  +D
Sbjct: 383 HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLD 442

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  MVD+LGR+G+L EA + I+ MP++    V+  +L AC +H  +E+ E+AA  + +L
Sbjct: 443 HYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDL 502

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           +P     +VLL+N+YA+AS W  ++++R  M+++G+ K PG S + +K   + F SG   
Sbjct: 503 EPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRS 562

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSS 758
           HP S RIY  LE L  ++K  GYVPD   ++HDVED  +E +LS HSE+LAI FGL+++ 
Sbjct: 563 HPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTV 622

Query: 759 PGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            GSTI + KNLRVCGDCH+A K I+ +  R+IIVRD  RFH F +G CSCGDYW
Sbjct: 623 EGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 226/508 (44%), Gaps = 78/508 (15%)

Query: 86  NSLSDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           N   D AR VF+ +      LY  M+ GYA+    D A+     M   DV     ++  +
Sbjct: 24  NQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVV----SWNSM 79

Query: 145 LKVCGDVGEIRRGKEIHGQL----------IVNGF-----------------SLDLFAMT 177
           +K C D  ++   +++  ++          ++NGF                   D+ A  
Sbjct: 80  IKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWN 139

Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--R 235
            ++  Y   G++E+  ++F  MP R+++SW +++ G  Q+G +E AL L  +M   G   
Sbjct: 140 SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 199

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
           +    T   ++ A AN  +L  G  +H +  + G+     +S AL+  YA C ++E +  
Sbjct: 200 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 259

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
           VF G    NVV W +++  Y      E+A+++F +M+ +GV P   +   AL++C  L  
Sbjct: 260 VFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA 319

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L+ G  +H    +L L TDV + NSLI MY +C  ++    IF ++  K +VSWN++I+G
Sbjct: 320 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVG 379

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
            AQ+G    AL +F +M    ++PD  T                                
Sbjct: 380 CAQHGCGMWALAFFNQMVRSMVEPDEIT-------------------------------- 407

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNER-----HVTTWNVMIDGYGTHGLGKAAVELF 530
               T L+   +  G     R LF   +E       +  +  M+D  G  G  + A EL 
Sbjct: 408 ---FTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 464

Query: 531 NKMLEGPTKPNDITFLCAISACS-HSGL 557
             M   P K N + +L  +SAC+ HS L
Sbjct: 465 RNM---PVKANSMVWLVLLSACTMHSKL 489



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 140/291 (48%), Gaps = 2/291 (0%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVY 139
           +C    + D  R+F+ +P +    + +M+ G  +    ++A+    +M     +V P   
Sbjct: 145 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 204

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y  ++  C +   + +G +IH  +   G+S D +    ++  YA C Q+E++ ++F   
Sbjct: 205 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 264

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
              ++V W  +V G+  N   E AL +   M  EG   +  +  S L +   + +L  G+
Sbjct: 265 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 324

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  A++ G ++ V V  +L+ MY +CG +    ++F  +  +N+VSWNS+I    + G
Sbjct: 325 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 384

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
               A+  F +M+   VEP  +T    L AC+  G  ++G  + K   + K
Sbjct: 385 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENK 435


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/650 (36%), Positives = 373/650 (57%), Gaps = 9/650 (1%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQ--TKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LLL  C +L+ LR +   ++          +  TKL+S +     L+ A  V +  P   
Sbjct: 26  LLLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRPD 85

Query: 103 DALYHTMLKGYAKFASLDDAVSFL--IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
              Y  ML       S  DAV+    +R R    A      +  LK C    + R G+ +
Sbjct: 86  AYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGRRL 145

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H  ++  G + D F M  +V+MYAK G +E A K+FDR+PER++VSW ++++G  QNG A
Sbjct: 146 HCDVVKAGGA-DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIA 204

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E  L L   M ++       T+VS+L A A +G L  G+ +HG  ++ G  +   +S +L
Sbjct: 205 EEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASL 264

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKC +VE AR VFD ++  ++V W +MI  Y +   P +A+++F       + P +
Sbjct: 265 LDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNS 324

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS--MTNSLISMYSKCKKVDRAADIF 398
           VTI   + A A L  L  G  VH +   +KLGT  S  + N+L+ MY+KC+ +  A  IF
Sbjct: 325 VTIATVISASAQLRHLPLGRSVHAI--GVKLGTMESDVVRNALVDMYAKCQALPEANSIF 382

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  K +V+WN+M+ GY++NG  NE+L  F +MR + I PD+ ++V+ + A   L+ + 
Sbjct: 383 GRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLH 442

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             K  H   I+  F  N++V TAL+++Y+KC  + +A+ +F+ M +R+  TW+ MI GYG
Sbjct: 443 IGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYG 502

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
             G    +++LFN+ML+    PN++ F   +SACSH+G+V  G  YF S+ + + I P M
Sbjct: 503 MQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSM 562

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HY  MVD++ RAG L EA +FIQ MPI+ GI+V+G+ L  CK+H  +E GE+A  ++  
Sbjct: 563 KHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAA 622

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           L P+   ++VL++N+Y +   WDK   +R  M+++GL K PGCS V  +N
Sbjct: 623 LHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSVGHEN 672


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/621 (35%), Positives = 354/621 (57%), Gaps = 33/621 (5%)

Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
           + V  +H    R       +++ A     +L +G+ VH +   + F   V +S  L+DMY
Sbjct: 73  EAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMY 132

Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI- 343
           AKCG +  A+++FD M  R++ SWN+MI  Y + G  E+A ++F +M  +     N  I 
Sbjct: 133 AKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAIS 192

Query: 344 --------MEALHACADLGDLER-----------------------GIFVHKLLDQLKLG 372
                    EAL     +   ER                       G  +H  L + +L 
Sbjct: 193 GYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELN 252

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
            D  + ++L+ +Y KC  +D A  IF +++ + +VSW  MI    ++GR  E    F  +
Sbjct: 253 LDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDL 312

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
               ++P+ +T   V+ A A+ +     K +H  ++ + ++   F ++AL+ MY+KCG  
Sbjct: 313 MQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNT 372

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             AR +F+ M++  + +W  +I GY  +G    A+  F  +L+  TKP+ +T++  +SAC
Sbjct: 373 RVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSAC 432

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           +H+GLV++G+ YF S+K+ +G+    DHY  ++DLL R+GR  EA + I  MP++P   +
Sbjct: 433 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFL 492

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           + ++LG C+IH N+EL ++AA  L+E++P+    ++ LANIYA A +W ++A VR  M+ 
Sbjct: 493 WASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDN 552

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
            G+ K PG S +E+K +VH F  G T HP++  I+ FL  L  +IK  GYVPDTN + HD
Sbjct: 553 MGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHD 612

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           VE+  +E  L  HSEKLA+ FG++++ PG+ I + KNLR C DCH A KYIS +  R+I 
Sbjct: 613 VEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKIT 672

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD +RFHCF++G CSC DYW
Sbjct: 673 VRDSNRFHCFEDGSCSCKDYW 693



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 220/481 (45%), Gaps = 48/481 (9%)

Query: 119 LDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG 178
           + +AV  L R    D  P    Y+ L+  C     +  G+ +H     + F   +F    
Sbjct: 71  VKEAVELLHRT---DHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNR 127

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-------- 230
           +++MYAKCG + +A  +FD M  RDL SWNT++ G+A+ G  E A  L   M        
Sbjct: 128 LLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSW 187

Query: 231 -------------------------HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYA 265
                                    HE      F T+ S L A A +  LR+GK +HGY 
Sbjct: 188 NAAISGYVTHNQPREALELFRVMQRHERSSSNKF-TLSSALAASAAIPCLRLGKEIHGYL 246

Query: 266 MRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAM 325
           +R   +    V +AL+D+Y KCG ++ AR +FD MK R+VVSW +MI    E G  EE  
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306

Query: 326 RIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMY 385
            +F+ ++  GV P   T    L+ACAD      G  VH  +            ++L+ MY
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMY 366

Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMV 445
           SKC     A  +F+++    LVSW ++I+GYAQNG+ +EAL++F  +     KPD  T V
Sbjct: 367 SKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYV 426

Query: 446 SVIPALAELSVI-RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            V+ A     ++ +  ++ H++  +            +ID+ A+ G    A  + D M  
Sbjct: 427 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPV 486

Query: 505 R-HVTTWNVMIDGYGTHG----LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
           +     W  ++ G   HG      +AA  L+    E P      T++   +  +++GL  
Sbjct: 487 KPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPA-----TYITLANIYANAGLWS 541

Query: 560 E 560
           E
Sbjct: 542 E 542



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 199/439 (45%), Gaps = 58/439 (13%)

Query: 19  QTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQ 75
           + LH   H  S R Y          + L+  C   + L   RR+      S         
Sbjct: 76  ELLHRTDHRPSARVY----------STLIAACVRHRALELGRRVHAHTKASNFVPGVFIS 125

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
            +L+ ++ K  SL DA  +F+ +  +    ++TM+ GYAK   L+ A     R  +D++ 
Sbjct: 126 NRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQA-----RKLFDEM- 179

Query: 136 PVVYNYTYLLKVCGDVGE--------------------------------------IRRG 157
           P   N+++   + G V                                        +R G
Sbjct: 180 PQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLG 239

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
           KEIHG LI    +LD    + ++++Y KCG ++EA  +FD+M +RD+VSW T++    ++
Sbjct: 240 KEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFED 299

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
           G  E    L   + + G R +  T   +L A A+  +  +GK VHGY M AG+D      
Sbjct: 300 GRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAI 359

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
           +ALV MY+KCG    AR VF+ M   ++VSW S+I  Y + G P+EA+  F+ +L  G +
Sbjct: 360 SALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTK 419

Query: 338 PTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           P  VT +  L AC   G +++G+ + H + ++  L         +I + ++  +   A +
Sbjct: 420 PDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAEN 479

Query: 397 IFSKLQGKTLVSWNAMILG 415
           I   +  K      A +LG
Sbjct: 480 IIDNMPVKPDKFLWASLLG 498


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/560 (40%), Positives = 342/560 (61%), Gaps = 22/560 (3%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +LR G+ VH   + AG+   + ++T LV MYA+CG +E AR V DGM  RNVVSW +MI+
Sbjct: 50  ALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMIS 109

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y +   P++A  +F  ML  G+       ++ +HA A   + E  +FV           
Sbjct: 110 GYSQNERPDQAWELFIMMLRAGIHQ-----VKQVHAFAVKTNFELHMFV----------- 153

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
                +SL+ MY+K + +  A  +F  L  + +VS+ A++ GY Q G   EAL+ F  + 
Sbjct: 154 ----GSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLY 209

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
           ++ ++ +  T  +++ AL+ LS + Y K +H L++R      + +  +LIDMY+KCG + 
Sbjct: 210 NEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLL 269

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            +R +FD M ER V +WN M+ GYG HGL    V+LF  M +   KP+ +T L  +S  S
Sbjct: 270 YSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYS 328

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H GLV+EG+  F  + K+       +HYG ++DLLGR+G+L +A + I+KMP +P   ++
Sbjct: 329 HGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIW 388

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           G++LGAC++H NV +GE  A +L +++P+  G +V+L+NIYAAA MW  + +VR +M KK
Sbjct: 389 GSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKK 448

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
            + K PG S + L   +H+F+S    HP+ + I   ++ +   IKAAG+VPD + + HDV
Sbjct: 449 TVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDV 508

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           +D  +E +L  HSEKLAI FGL+++    TI + KNLR+C DCHN  K++S V GREI +
Sbjct: 509 DDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISL 568

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFH    G C+CGDYW
Sbjct: 569 RDKNRFHLITEGACTCGDYW 588



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 211/423 (49%), Gaps = 64/423 (15%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           A   ++Y   +  C +   +R G+++H +++  G+   L+  T +V MYA+CG +E+A  
Sbjct: 32  AARFHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARN 91

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           + D MPER++VSW  +++G++QN   + A +L   M   G                    
Sbjct: 92  VLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAG-------------------- 131

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           +   K VH +A++  F+  + V ++L+DMYAK   ++ AR VFD + +R+VVS+ ++++ 
Sbjct: 132 IHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSG 191

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y + G  EEA+ +F+ + ++G++   VT    L+A + L  ++ G  VH L+ + +L   
Sbjct: 192 YTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFF 251

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
           +++ NSLI MYSKC K+  +  +F  +  +++VSWNAM++GY ++G  +E +  F  M  
Sbjct: 252 MALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-C 310

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
             +KPDS T+++V+                                     Y+  G V  
Sbjct: 311 DEVKPDSVTLLAVLSG-----------------------------------YSHGGLVDE 335

Query: 495 ARALFDMMNERHVTTWNV-----MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
              +FD + +   T  N      +ID  G  G  + A+ L  KM   P +P    +   +
Sbjct: 336 GLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKM---PFQPTRAIWGSLL 392

Query: 550 SAC 552
            AC
Sbjct: 393 GAC 395



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 208/406 (51%), Gaps = 28/406 (6%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E R++   ++ +G        T+LV ++ +  +L DA  V + +P++    +  M+ 
Sbjct: 50  ALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMIS 109

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
           GY++    D A    I M    +  V                    K++H   +   F L
Sbjct: 110 GYSQNERPDQAWELFIMMLRAGIHQV--------------------KQVHAFAVKTNFEL 149

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
            +F  + +++MYAK   I+EA ++FD +P RD+VS+  I++G+ Q G  E ALDL   ++
Sbjct: 150 HMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLY 209

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
            EG + + +T  ++L A++ + S+  GK VHG  +R      + +  +L+DMY+KCG++ 
Sbjct: 210 NEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLL 269

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            +R VFD M  R+VVSWN+M+  Y   G   E +++F+ M D+ V+P +VT++  L   +
Sbjct: 270 YSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLSGYS 328

Query: 352 DLGDLERGI--FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
             G ++ G+  F H + +Q  L  +      +I +  +  ++ +A ++  K+  +   + 
Sbjct: 329 HGGLVDEGLDMFDHIVKEQSTL-LNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAI 387

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPD---SFTMVSVIPALA 452
              +LG A     N  +  F   +  +I+P+   ++ ++S I A A
Sbjct: 388 WGSLLG-ACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAA 432


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/566 (39%), Positives = 342/566 (60%), Gaps = 12/566 (2%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +LR G+ VH   + AG+   + ++T LV MYA+CG +E A  V DGM  RNVVSW +MI+
Sbjct: 50  ALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMIS 109

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD----QL 369
            Y +   P EA  +F  ML  G EP   T+   L +C       +GI  H++       +
Sbjct: 110 GYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTG----SQGIHQHQIKQVHAFAI 165

Query: 370 KLGTDVSM--TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           K   ++ M   +SL+ MY++ + +  A  +F  L  + +VS+  ++ GY + G   EALN
Sbjct: 166 KKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALN 225

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            F ++ ++ ++ +  T   ++ AL+ LS + Y K +H L++R      + +  +LIDMY+
Sbjct: 226 LFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYS 285

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG +  +R +FD M ER V +WN M+ GYG HG+    V+LF  M +   KP+ +T L 
Sbjct: 286 KCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPDSVTLLA 344

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +   SH GLV+EG+  F  + K+        HYG ++DLLGR+G+L +A   IQKMP +
Sbjct: 345 VLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQ 404

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
           P   ++G++LGAC++H NV +GE  A +LF+++P+  G +V+L+NIYAAA MW  + ++R
Sbjct: 405 PTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLR 464

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
            +M KK + K PG S + L   +H+F+S    HP+ + I   +  +   IKAAG+VPD +
Sbjct: 465 KLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLS 524

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            + HDV+D  +E +L  HSEKLAI FGL+++    TI + KNLR+C DCHN  K++S V 
Sbjct: 525 CVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVY 584

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
           GREI +RD +RFH    G C+CGDYW
Sbjct: 585 GREISLRDKNRFHLITEGACTCGDYW 610



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 190/318 (59%), Gaps = 7/318 (2%)

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           A   ++Y   +  C     +R G+++H +++  G+   L+  T +V MYA+CG +E+A+ 
Sbjct: 32  AARFHDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHN 91

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           + D MPER++VSW  +++G++QN     A DL   M   G   +  T+ S+L +    GS
Sbjct: 92  VLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSC--TGS 149

Query: 255 LRIG----KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
             I     K VH +A++  F+  + V ++L+DMYA+   ++ AR VFD + +R+VVS+ +
Sbjct: 150 QGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTT 209

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
           +++ Y   G  EEA+ +F+++ ++G++   VT    L+A + L  ++ G  VH L+ + +
Sbjct: 210 ILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRE 269

Query: 371 LGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
           L   +++ NSLI MYSKC K+  +  +F  +  +++VSWNAM++GY ++G   E +  F 
Sbjct: 270 LPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFR 329

Query: 431 KMRSKNIKPDSFTMVSVI 448
            M  K +KPDS T+++V+
Sbjct: 330 FMCDK-VKPDSVTLLAVL 346



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 215/410 (52%), Gaps = 10/410 (2%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           +L+E R++   ++ +G        T+LV ++ +  +L DA  V + +P++    +  M+ 
Sbjct: 50  ALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMIS 109

Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGF 169
           GY++     +A    I M      P  +    +L  C     I +   K++H   I   F
Sbjct: 110 GYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNF 169

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            L +F  + +++MYA+   I+EA ++FD +P RD+VS+ TI++G+ + G  E AL+L  +
Sbjct: 170 ELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQ 229

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           ++ EG + + +T   +L A++ + S+  GK VHG  +R      + +  +L+DMY+KCG+
Sbjct: 230 LYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGK 289

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +  +R VFD M  R+VVSWN+M+  Y   G   E +++F+ M D+ V+P +VT++  L  
Sbjct: 290 LLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVTLLAVLLG 348

Query: 350 CADLGDLERGI--FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
            +  G ++ G+  F H + +Q  L  +      +I +  +  ++++A  +  K+  +   
Sbjct: 349 YSHGGLVDEGLDMFDHIVKEQSTL-LNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTR 407

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD---SFTMVSVIPALAEL 454
           +    +LG A     N  +  F   +  +I+P+   ++ ++S I A A +
Sbjct: 408 AIWGSLLG-ACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARM 456


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/592 (36%), Positives = 353/592 (59%), Gaps = 6/592 (1%)

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           A+DL+ +    G  GD   +  ++   A   +L  G+ +H +      D    +S  LVD
Sbjct: 28  AVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVD 84

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG +  A+ VFD M+ +NV SW  ++A +V+ G   EA+++F +M  +G  P  V 
Sbjct: 85  MYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVA 144

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           +++ + +C     L +G  +H       + +D+   N++I+MY KC  +  A  +F+++ 
Sbjct: 145 LLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMP 204

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            K ++SW+ MI  + QN   +EAL +F  M+ + ++ D  T VSV+ A   +  +   K 
Sbjct: 205 EKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKA 264

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +H  ++ +  + ++ V   L++MY KCG+   AR +FD M E++V +WN M+  YG +G 
Sbjct: 265 LHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGR 324

Query: 523 GKAAVELFNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            + A+ LF+ M LEG  +PNDITF+  +  CSHSG  ++ + +F  +++D+GI P   H+
Sbjct: 325 SREALALFDSMDLEG-VRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHF 383

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
           G ++D+LGR+G+L EA + IQ MP+     ++ ++L AC  HK+ +   +AA   F+ +P
Sbjct: 384 GCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREP 443

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
                +++L+N+YAA   WD+ AKVR  ME+ G++K  G S +E+  +VH F +G + HP
Sbjct: 444 RCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHP 503

Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
              RI+  L+ L+ E++  GY PD    IH +E+  ++ +L  HSEKLA+AFG+ ++ P 
Sbjct: 504 DKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPR 563

Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + + I KNLRVC DCH+A K+IS V GR I VRD +RFH F  G CSCGDYW
Sbjct: 564 TPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 188/353 (53%), Gaps = 5/353 (1%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKL-VSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +L+E RRI   +  SG  D+  F + L V ++ K  SL +A RVF+ +  K    +  ++
Sbjct: 56  ALEEGRRIHRWM-DSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLM 114

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+ +     +A+    RM  +   P        +  CG    + +G+EIH      G  
Sbjct: 115 AGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMD 174

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            DL     ++NMY KCG I EA+ +F RMPE++++SW+T++A F QN  A+ AL     M
Sbjct: 175 SDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLM 234

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            +EG   D IT VS+L A  +VG+L +GKA+H   + AG D+ + V   LV+MY KCG  
Sbjct: 235 QQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSP 294

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + AR VFD M  +NVVSWN+M+AAY + G   EA+ +F  M  +GV P ++T +  L+ C
Sbjct: 295 DDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCC 354

Query: 351 ADLGDLERGI--FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           +  G  +  +  FV    D      +V     LI M  +  K++ A ++   +
Sbjct: 355 SHSGKFKDAVSHFVEMRQDFGITPREVHF-GCLIDMLGRSGKLEEAEELIQAM 406



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           L++ C     +  G+ IH  +         F    +V+MY KCG + EA ++FD M  ++
Sbjct: 47  LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           + SW  ++AGF Q+G    A+ L  RM +EG   D + ++  + +     +L  G+ +H 
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS 166

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
            A   G DS +  + A+++MY KCG +  A  VF  M  +NV+SW++MIAA+ +    +E
Sbjct: 167 AAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+  F+ M  +G+E   +T +  L A   +G LE G  +H  +    L T + + N+L++
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVN 286

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY KC   D A D+F  +  K +VSWNAM+  Y QNGR  EAL  F  M  + ++P+  T
Sbjct: 287 MYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDIT 346

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDM 501
            V+++   +     + A   H + +R  F           LIDM  + G +  A  L   
Sbjct: 347 FVTILYCCSHSGKFKDAV-SHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQA 405

Query: 502 M 502
           M
Sbjct: 406 M 406


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/560 (41%), Positives = 331/560 (59%), Gaps = 47/560 (8%)

Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA---- 351
           +FD +++ N   WN+M+ AY++  + E+A+ +++ M+   V P N T    + ACA    
Sbjct: 85  IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 144

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC----------------------- 388
           + G  E    +H  + ++   +DV + N+LI+MY+ C                       
Sbjct: 145 EFGGKE----IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 200

Query: 389 ------KKVD-----RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
                 KK D      A  +F+++  K +VSW+A+I GY QNG   EAL  F +M +  +
Sbjct: 201 ILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 260

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI----DMYAKCGAVG 493
           + D   +VSV+ A A LS+++  K IH LVIR   E  V +  ALI    DMY KCG V 
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
            A  +F+ M E+ V++WN +I G   +GL + ++++F++M      PN+ITF+  + AC 
Sbjct: 321 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 380

Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
           H GLV+EG  +F S+ + +GIEP + HYG MVDLLGRAG LNEA   I+ MP+ P +  +
Sbjct: 381 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 440

Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
           GA+LGACK H + E+GE+   +L EL PD  G+HVLL+NI+A+   W+ + +VR +M+++
Sbjct: 441 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 500

Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DV 732
           G+ KTPGCSL+E    VH F +G   HP   ++   L  +   +K  GY PDTN +  D+
Sbjct: 501 GVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDI 560

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  +E  L  HSEKLAIAFGLL  SP + I I KNLR+C DCH A K IS    REI+V
Sbjct: 561 DEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVV 620

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD HRFH FK G CSC DYW
Sbjct: 621 RDRHRFHYFKEGACSCMDYW 640



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 205/416 (49%), Gaps = 42/416 (10%)

Query: 47  LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLV--SLFCKYNSLSDAARVFEPIPDKLDA 104
           L  C +LK+  RIL  +I +G        ++L+  S    +  L  + ++F+ I +    
Sbjct: 36  LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 95

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           +++TM++ Y +  S + A+     M  ++V P  Y Y  +++ C        GKEIH  +
Sbjct: 96  MWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHV 155

Query: 165 IVNGFSLDLFAMTGVVNMYAKCG----------------------------------QIE 190
           +  GF  D++    ++NMYA CG                                  Q+ 
Sbjct: 156 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVM 215

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           EA+K+F+ M E+D+VSW+ +++G+ QNG  E AL +   M+  G R D + +VS+L A A
Sbjct: 216 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA 275

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALV----DMYAKCGRVETARLVFDGMKSRNVV 306
           ++  ++ GK +HG  +R G +S VN+  AL+    DMY KCG VE A  VF+GM+ + V 
Sbjct: 276 HLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVS 335

Query: 307 SWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKL 365
           SWN++I      G  E ++ +F +M + GV P  +T M  L AC  +G ++ G      +
Sbjct: 336 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 395

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNG 420
           +++  +  +V     ++ +  +   ++ A  +   +     + +W A++    ++G
Sbjct: 396 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 451



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 57/338 (16%)

Query: 337 EPT-NVTIMEA-LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSL-----ISMYSKCK 389
           +PT  ++I+E  LH C +L    R      +L Q+ L   +S T +       S  S   
Sbjct: 24  KPTITLSILETHLHNCHNLKQFNR------ILSQMILTGFISDTFAASRLLKFSTDSPFI 77

Query: 390 KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIP 449
            +D +  IF +++      WN M+  Y Q+    +AL  +  M   N+ PD++T   V+ 
Sbjct: 78  GLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQ 137

Query: 450 ALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD--------- 500
           A A   +    K IH  V++  F+ +V+V   LI+MYA CG +  AR LFD         
Sbjct: 138 ACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197

Query: 501 -------------------------MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
                                     M+E+ + +W+ +I GY  +G+ + A+ +F +M  
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMV----DLLG 589
              + +++  +  +SAC+H  +V+ G  IH    L    GIE  ++   A++    D+  
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIH---GLVIRMGIESYVNLQNALIHMYSDMYM 314

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE 627
           + G +  A +    M  E G++ + A++    ++  VE
Sbjct: 315 KCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 351


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/687 (33%), Positives = 385/687 (56%), Gaps = 3/687 (0%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  CT  K +    ++  + +K  L       T L++L+ K   + +A  VF  +P 
Sbjct: 124 ASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPV 183

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    ++T++ GYA+      A+    RM  + V P  +     +  C  +G +  G++I
Sbjct: 184 RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           HG    +    D   +  ++++Y KC ++  A K+FD M  R+LVSW T+++G+ QN F 
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFN 303

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             A+ +   M + G + D     SIL +  ++ ++  G+ +H + ++A  ++   V  AL
Sbjct: 304 AEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNAL 363

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKC  +  AR VFD +   + +S+N+MI  Y +  +  EA+ IFQ+M    + P+ 
Sbjct: 364 IDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSL 423

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           +T +  L   +    +E    +H L+ +     D+   ++LI +YSKC  V+ A  +F+ 
Sbjct: 424 LTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNM 483

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           L  K +V WN+MI G+AQN +  EA+  F ++    + P+ FT V+++   + L+ + + 
Sbjct: 484 LHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG 543

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           +  HA +I++  + +  V  ALIDMYAKCG +   R LF+      V  WN MI  Y  H
Sbjct: 544 QQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQH 603

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G  + A+++F  M E   +PN +TF+  +SAC+H+G V EG+++F S+K +Y IEP ++H
Sbjct: 604 GHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEH 663

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y ++V+L GR+G+L+ A +FI++MPI+P   V+ ++L AC +  N E+G  AA      D
Sbjct: 664 YASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLAD 723

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           P + G +VLL+NIYA+  +W  +  +R  M+  G  K  GCS +E+  EVH+F     +H
Sbjct: 724 PTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREH 783

Query: 701 PQSKRIYTFLETLIDEIKAAGYVPDTN 727
           P+++ IY+ L+ L   IK  GYVPDT+
Sbjct: 784 PEAELIYSVLDELTSLIKNLGYVPDTS 810



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 266/536 (49%), Gaps = 16/536 (2%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
           R    IH +  V G   DLF    ++  Y+  G++ +A  +FDRMP R+LVSW ++++ +
Sbjct: 35  RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94

Query: 215 AQNGFAELALDLVTRMHEEGRR--GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
            Q+G  + A+ L     +       +F+ + S+L A     ++ +G+ VHG A++   D+
Sbjct: 95  TQHGRDDCAISLFVAFQKASCEVPNEFL-LASVLRACTQSKAVSLGEQVHGIAVKLDLDA 153

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V V TAL+++YAK G ++ A LVF  +  R  V+WN++I  Y + G    A+ +F +M 
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG 213

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
            +GV P    +  A+ AC+ LG LE G  +H    +    TD S+ N LI +Y KC ++ 
Sbjct: 214 IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLS 273

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F  ++ + LVSW  MI GY QN    EA+  F  M     +PD F   S++ +  
Sbjct: 274 AARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCG 333

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            L+ I   + IHA VI++  E + +V  ALIDMYAKC  +  ARA+FD + E    ++N 
Sbjct: 334 SLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNA 393

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI+GY  +     AV +F +M     +P+ +TF+ ++   S S L  E       L    
Sbjct: 394 MIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFV-SLLGVSSSQLAIELSKQIHGLIIKS 452

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           G    +    A++D+  +   +N+A      +  +  +     + G    H   E GE+A
Sbjct: 453 GTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFG----HAQNEQGEEA 508

Query: 633 ANRLFE------LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCS 682
             +LF       + P+E  +  L+      ASM+    +    + K G+   P  S
Sbjct: 509 I-KLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG-QQFHAWIIKAGVDNDPHVS 562


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/622 (38%), Positives = 355/622 (57%), Gaps = 39/622 (6%)

Query: 228 TRMHEEGRRGDFITIVSILPAVANV----GSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
            RM   G R D  T  ++L AVA      GS    +AVH + +R G     +V+++LV  
Sbjct: 8   ARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAA 67

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y   G    AR +    +    V+WN++I+ +  GG   E+   F  M   G  PT VT 
Sbjct: 68  YTAGGDGAAARALVG--ECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTY 125

Query: 344 MEALHACAD-LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK------------- 389
           +  L AC     D+  G+ VH  +    +  D+ + N+L+ MY++C              
Sbjct: 126 VSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQ 185

Query: 390 ------------------KVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
                             +VD A D+F ++  +  VSW AMI GY    R  EAL  F +
Sbjct: 186 VRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFRE 245

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
           M+  N+  D FTMVSVI A A+L  +   +W+   + R   + + FV  ALIDMY+KCG+
Sbjct: 246 MQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGS 305

Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
           +  A  +F  M+ R   TW  +I G   +G  + A+E+F++M+     P+++TF+  ++A
Sbjct: 306 IERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTA 365

Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
           C+H+GLV++G  +F S+ + Y I P + HYG ++DLLGRAG++ EA D I +MP+ P  T
Sbjct: 366 CTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNST 425

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
           ++G +L AC++H N E+GE  A RL ELDP+    ++LL+NIYA  + W+ + ++R  + 
Sbjct: 426 IWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIM 485

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH- 730
           +KG++K PGCSL+E+   +H F +G   HP SK IY+ LE++I ++   GY PD   +  
Sbjct: 486 EKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFV 545

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           +V +  ++ +L  HSEKLAIAF LL+S P + I I KNLR+C DCHNA K IS + GRE+
Sbjct: 546 EVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREV 605

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           +VRD  RFH F++G CSC DYW
Sbjct: 606 VVRDRTRFHHFRHGFCSCKDYW 627



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 151/329 (45%), Gaps = 33/329 (10%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD-VGEIRRGKEIHGQL 164
           ++ ++ G+ +     ++    + M     AP    Y  +L  CG    ++  G ++HG++
Sbjct: 90  WNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRV 149

Query: 165 IVNGFSLDLFAMTGVVNMYAKC-------------------------------GQIEEAY 193
           + +G   DL     +V+MYA+C                               GQ++EA 
Sbjct: 150 VGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEAR 209

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +FDRMPERD VSW  ++ G+        AL++   M       D  T+VS++ A A +G
Sbjct: 210 DLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLG 269

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           +L +G+ V  Y  R G      V  AL+DMY+KCG +E A  VF GM  R+  +W ++I 
Sbjct: 270 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIIL 329

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLG 372
                G  EEA+ +F +M+     P  VT +  L AC   G +++G  F   +++   + 
Sbjct: 330 GLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIA 389

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKL 401
            +V     +I +  +  K+  A D   ++
Sbjct: 390 PNVVHYGCIIDLLGRAGKITEALDTIDQM 418



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 129/272 (47%), Gaps = 4/272 (1%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T L+S   +   + +A  +F+ +P++    +  M+ GY   A   +A+     M+Y +V+
Sbjct: 193 TSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVS 252

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              +    ++  C  +G +  G+ +   +   G  +D F    +++MY+KCG IE A  +
Sbjct: 253 ADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDV 312

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F  M  RD  +W  I+ G A NG+ E A+++  RM       D +T + +L A  + G +
Sbjct: 313 FKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLV 372

Query: 256 RIGKAVHGYAMRAGFDSIVNVS--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMI 312
             G+     +M   ++   NV     ++D+  + G++  A    D M  + N   W +++
Sbjct: 373 DKGREFF-LSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLL 431

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           AA    GN E    + +++L+   E + V I+
Sbjct: 432 AACRVHGNSEIGELVAERLLELDPENSMVYIL 463



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 140/335 (41%), Gaps = 43/335 (12%)

Query: 322 EEAMRIFQKMLDQGVEPTNVTIMEALHACADL----GDLERGIFVHKLLDQLKLGTDVSM 377
           E+A+  + +ML +G  P   T    L A A      G       VH  + +L +G +  +
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +SL++ Y+       A  +  +    T V+WNA+I G+ + GR  E+   F  M     
Sbjct: 61  ASSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 438 KPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC------- 489
            P   T VSV+ A  + +  +     +H  V+ S    ++ V  AL+DMYA+C       
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178

Query: 490 ------------------------GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
                                   G V  AR LFD M ER   +W  MIDGY      + 
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY--GA 583
           A+E+F +M       ++ T +  I+AC+  G +E G  +        GI+  MD +   A
Sbjct: 239 ALEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIK--MDAFVGNA 295

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
           ++D+  + G +  A D  + M      T    +LG
Sbjct: 296 LIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILG 330


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/775 (32%), Positives = 414/775 (53%), Gaps = 6/775 (0%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A ++ +C SL++     ++   +I SGL  Q      L+S+      + DA ++F  + +
Sbjct: 149 ATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEE 208

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAP-VVYNYTYLLKVCGDVGEIRRGKE 159
           +    ++ ++  Y+       +      MR   +          L+ VC     +  G  
Sbjct: 209 RDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSG 268

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H   +  G    +  +  +VNMY+  G++ +A  +F  M  RDL+SWNT+++ + QNG 
Sbjct: 269 VHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGN 328

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
              AL  + ++       D +T  S L A ++ G+L  G+ VH   ++      + V  +
Sbjct: 329 NMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNS 388

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+ MY KC  +E A  +F  M + +VVS N +I +Y    +  +AM++F  M    V+  
Sbjct: 389 LITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLN 448

Query: 340 NVTIMEALHACADLGDLER-GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
            +TI+  L +     DL   G+ +H         +D  ++NSLI+MY+KC  ++ + ++F
Sbjct: 449 YITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVF 508

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  +++VSWNAMI    Q+G   E+L  F  MR      D   +   + + A L+ + 
Sbjct: 509 QRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLE 568

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
               +H L ++     +  V+ A +DMY KCG +     +      R    WN +I GY 
Sbjct: 569 EGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYA 628

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            +G  K A E F  M+     P+ +TF+  +SACSH+GLV++GI Y+ S+   +G+ P +
Sbjct: 629 RYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGI 688

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            H   +VD+LGR GR  EA  FI+ MP+ P   ++ ++L + + HKN+++G KAA RL E
Sbjct: 689 KHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLE 748

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           LDP +   +VLL+N+YA ++ W  + +VR+ M+   L K P CS ++ K EV +F  G  
Sbjct: 749 LDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDH 808

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            H  + +IY  L+ ++ +++  GYV DT+S +HD ++  +E  L +HSEKLA+A+GL+  
Sbjct: 809 SHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITV 868

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             G T+ I KNLRVC DCH   K +S+V  REI++RD +RFH FK G CSC D+W
Sbjct: 869 PEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 282/580 (48%), Gaps = 25/580 (4%)

Query: 44  ALLLEVCTSLKELRR----ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           A L+  C   +E R     I  L  K+GL       T L+ L+     + DA R+F  +P
Sbjct: 47  ASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMP 106

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           ++    +  ++   +    L++A+ +  RMR + +A     +  ++ +CG + +   G +
Sbjct: 107 ERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQ 166

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +   +IV+G    +     +++M    G++ +A K+F RM ERD VSWN +V+ ++  G 
Sbjct: 167 VFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGL 226

Query: 220 AELALDLVTRMHEEG-RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVST 278
              +  + + M   G  R D  T+ S++   A+   +  G  VH   +R G  S + V  
Sbjct: 227 CSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVN 286

Query: 279 ALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
           ALV+MY+  G++  A  +F  M  R+++SWN+MI++YV+ GN  +A++   ++L     P
Sbjct: 287 ALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGP 346

Query: 339 TNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF 398
             +T   AL AC+  G L  G  VH +  QL L  ++ + NSLI+MY KC  ++ A  IF
Sbjct: 347 DRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIF 406

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
             +    +VS N +I  YA      +A+  F  MR   +K +  T+V+++ +    + +R
Sbjct: 407 QLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLR 466

Query: 459 -YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
            Y   +HA  I + F  + +V  +LI MYAKCG + ++  +F  +  R V +WN MI   
Sbjct: 467 NYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAAN 526

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC---------SHSGLVEEGIHYFTSL 568
             HG G+ +++LF  M       N +  +C ++ C            G+   G+     L
Sbjct: 527 VQHGHGEESLKLFMDMRH---DGNGLDHIC-LAECMSSSASLASLEEGMQLHGLGLKCGL 582

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
             D  +        A +D+ G+ G+++E    +    I P
Sbjct: 583 GNDSHV------VNAAMDMYGKCGKMDEMLKMLPDPAIRP 616



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 198/419 (47%), Gaps = 21/419 (5%)

Query: 199 MPE--RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
           MP+  R   SW T ++G  + G    A  ++  M E G       + S++ A       R
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60

Query: 257 -IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
             G A+H    +AG    V + TAL+ +Y     V  A+ +F  M  RNVVSW +++ A 
Sbjct: 61  ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGT 373
              G+ EEA+  +++M  + +          +  C  L D   G  +F H ++  L+   
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQ--R 178

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
            VS+ NSLISM     +V  A  +F +++ +  VSWNA++  Y+  G  +++   F  MR
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMR 238

Query: 434 SKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
               ++ D+ T+ S+I   A    + Y   +H+L +R+     + V+ AL++MY+  G +
Sbjct: 239 RGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKL 298

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A  LF  M+ R + +WN MI  Y  +G    A++   ++L     P+ +TF  A+ AC
Sbjct: 299 ADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGAC 358

Query: 553 SHSGLVEEG--IHYFTSLKKDYGIEPVMDHY----GAMVDLLGRAGRLNEAWDFIQKMP 605
           S  G + +G  +H  T       ++  + H      +++ + G+   + +A    Q MP
Sbjct: 359 SSPGALMDGRMVHAMT-------LQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 339/569 (59%), Gaps = 1/569 (0%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           IL   A    L  GKA H   +  G  + +  S  L++MY+KCG V+ AR VFD M SR+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +VSWN+MI +  + G   EA+ +  +M  +G   +  TI   L ACA    L     +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              +  +  +V +  +L+ +Y+KC  +  A  +F  +  +++V+W++M  GY QN    +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F K     +K D F M SVI A A L+ +   K ++AL+ +S F  N+FV ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKCG +  +  +F  + +R+V  WN MI G   H      + LF KM +    PND+T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           F+  +SAC H GLV +G  YF  + K++ + P + HY  MVD L RAG++ EA+D I K+
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
           P     +++G++L +C+ H N+EL E AA +LF+++P   G ++LL+N+YAA   WD++A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
           K+R ++++  ++K  G S +E+K++VH F  G   HP+   IY+ L  ++DE++  GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 725 DT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
           +T + +H V + +++ LL  HSEKLA   GLL   P + I I KNLR+CGDCH+  K  S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
               R++IVRD +RFH FKNG CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 209/380 (55%), Gaps = 2/380 (0%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
           +LK+C     + +GK  H Q+++ G   DL     ++NMY+KCG ++ A ++FD MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           LVSWNT++    QNG    ALDL+ +M  EG      TI S+L A A   +L   + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           +A++A  D  V V+TAL+D+YAKCG ++ A  VF+ M  R+VV+W+SM A YV+    E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F+K  + G++     +   + ACA L  +  G  ++ LL +    +++ + +SLI 
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MY+KC  ++ +  +F  ++ + +V WNAMI G +++ R  E +  F KM+   + P+  T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 444 MVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
            VSV+ A   + ++R   K+   +        NVF  + ++D  ++ G +  A  L   +
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 503 N-ERHVTTWNVMIDGYGTHG 521
                 + W  ++    THG
Sbjct: 430 PFNASASMWGSLLASCRTHG 449



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 192/365 (52%), Gaps = 2/365 (0%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           I+  GL    L    L++++ K  S+  A +VF+ +P +    ++TM+    +    ++A
Sbjct: 90  ILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEA 149

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +  L++M+ +      +  + +L  C     +   + +H   I     L++F  T ++++
Sbjct: 150 LDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDV 209

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG +++A  +F+ MP+R +V+W+++ AG+ QN   E AL L  +  E G + D   +
Sbjct: 210 YAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLM 269

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S++ A A + ++  GK ++    ++GF S + V+++L+DMYAKCG +E +  VF  ++ 
Sbjct: 270 SSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEK 329

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
           RNVV WN+MI+         E M +F+KM   G+ P +VT +  L AC  +G + +G   
Sbjct: 330 RNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKY 389

Query: 363 HKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNG 420
             L+  +  L  +V   + ++   S+  ++  A D+ SKL      S W +++     +G
Sbjct: 390 FDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449

Query: 421 RVNEA 425
            +  A
Sbjct: 450 NLELA 454



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 167/362 (46%), Gaps = 40/362 (11%)

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           + E L  CA    L +G   H  +  + L TD+  +N LI+MYSKC  VD A  +F ++ 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            ++LVSWN MI    QNG  NEAL+   +M+ +      FT+ SV+ A A    +   + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           +HA  I++  + NVFV TAL+D+YAKCG +  A  +F+ M +R V TW+ M  GY  + +
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD------YGIEP 576
            + A+ LF K  E   K +       I AC+    + EG      L K       +    
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASS 306

Query: 577 VMDHYG------------------------AMVDLLGRAGRLNEA---WDFIQKMPIEPG 609
           ++D Y                         AM+  L R  R  E    ++ +Q+M + P 
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
              F ++L AC     V  G+K     F+L   E   H L  N++  + M D L++   I
Sbjct: 367 DVTFVSVLSACGHMGLVRKGQK----YFDLMTKE---HHLAPNVFHYSCMVDTLSRAGQI 419

Query: 670 ME 671
            E
Sbjct: 420 FE 421


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/568 (39%), Positives = 351/568 (61%), Gaps = 21/568 (3%)

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L++G  VH + +  G      V + +V  YA  G ++++  VF+G+   +  ++  ++ +
Sbjct: 86  LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG--DYFTFPFVLKS 143

Query: 315 YVEGGNPEEAMRIFQKMLDQGVE-----PTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
            VE  +      +   +L  G++      T++ I+     C ++ D        K+ D +
Sbjct: 144 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYG--KCGEIND------AGKVFDNM 195

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
            +  DVS  N+L++ Y+K   +D A  IF ++  + +VSW  MI GY+Q+G   +AL+ F
Sbjct: 196 TI-RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254

Query: 430 CKMRSKN--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
            +M  ++  ++P+  T++SV+PA A+LS +   + IH L  R     N  V+ AL  MYA
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314

Query: 488 KCGAVGTARALFDMMN--ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           KCG++  AR  FD +N  E+++  WN MI  Y ++G G  AV  F +M++   +P+DITF
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 374

Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
              +S CSHSGLV+ G+ YF  +   Y I P ++HY  + DLLGRAGRL EA   + +MP
Sbjct: 375 TGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 434

Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
           +  G +++G++L AC+ H+N+E+ E AA +LF L+P+  G +VLL+N+YA A  W ++ K
Sbjct: 435 MPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDK 494

Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
           +R I++ +G +K+PGCS +E+  + H F  G T HPQ K IY FLE L +++KAAGY PD
Sbjct: 495 LRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPD 554

Query: 726 TNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISL 784
           T+ + HD+ +  +E  L +HSEKLA+AFG+LN+   + + + KNLR+CGDCH A  +IS 
Sbjct: 555 TSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISE 614

Query: 785 VTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           + GRE+IVRD++RFH FK G CSCGDYW
Sbjct: 615 IYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 154/287 (53%), Gaps = 41/287 (14%)

Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
           M+  YA    +D +VS      ++ +    + + ++LK   ++  +  GK +HG ++  G
Sbjct: 111 MVAFYASSGDIDSSVSV-----FNGIGDY-FTFPFVLKSSVELLSVWMGKCVHGLILRIG 164

Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFD------------------------------- 197
              DL+  T ++ +Y KCG+I +A K+FD                               
Sbjct: 165 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 224

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSL 255
           RMP R++VSW T+++G++Q+G A+ AL L   M +E  G R +++TI+S+LPA A + +L
Sbjct: 225 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 284

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM--KSRNVVSWNSMIA 313
             G+ +H  A R G +S  +V  AL  MYAKCG +  AR  FD +    +N+++WN+MI 
Sbjct: 285 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 344

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           AY   G+  +A+  F++M+  G++P ++T    L  C+  G ++ G+
Sbjct: 345 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 391



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 172/403 (42%), Gaps = 73/403 (18%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P + +Y  + +    +  ++ G ++H  +++ G        + +V  YA  G I+ +  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F                    NG                  GD+ T   +L +   + S+
Sbjct: 128 F--------------------NGI-----------------GDYFTFPFVLKSSVELLSV 150

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +GK VHG  +R G    + V+T+L+ +Y KCG +  A  VFD M  R+V SWN+++A Y
Sbjct: 151 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 210

Query: 316 VEGGNPEEAMRIFQKML---------------------------------DQGVEPTNVT 342
            + G  + A+ IF++M                                  D GV P  VT
Sbjct: 211 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 270

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL- 401
           IM  L ACA L  LERG  +H+L  ++ L ++ S+  +L +MY+KC  +  A + F KL 
Sbjct: 271 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 330

Query: 402 -QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
              K L++WN MI  YA  G   +A++ F +M    I+PD  T   ++   +   ++   
Sbjct: 331 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 390

Query: 461 -KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
            K+ + +         V     + D+  + G +  A  L   M
Sbjct: 391 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM 433


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/583 (39%), Positives = 356/583 (61%), Gaps = 5/583 (0%)

Query: 234 GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA 293
           GR   F    +IL    +  ++R G+ VH + ++  +   V + T L+ +Y KC  +  A
Sbjct: 85  GREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 144

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
           R +FD M  +NVVSW +MI+AY + G   EA+ +F +ML    EP + T    L +C   
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
              E G  +H +  +    + + + +SL+ MY+K  ++  A  +F  L  + +V+  A+I
Sbjct: 205 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 264

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
            GYAQ G   EAL  F +++ + +  +S T  SV+ AL+ L+ + + K +H+ V+RS   
Sbjct: 265 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 324

Query: 474 KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM 533
             V ++ +LIDMY+KCG V  AR +FD M ER   +WN M+ GY  HG+ +  +ELF  M
Sbjct: 325 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 384

Query: 534 L-EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLGR 590
             E   KP+ IT+L  +S CSH  L + G+  F ++   KD GIEP + HYG +VDLLGR
Sbjct: 385 REENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGHYGCVVDLLGR 443

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGR+ EA+DFI+KMP  P   ++G++LG+C++H +VE+G     +L EL+P+  G +V+L
Sbjct: 444 AGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVIL 503

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFL 710
           +N+YA+A  W+ +  +R +M++K + K PG S VEL   VH+F++    HP+ + +   +
Sbjct: 504 SNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKV 563

Query: 711 ETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           + L  + K  GYVPD + + +DV++  +E +L  HSEKLA+AFGL+ +  G+TI + KNL
Sbjct: 564 KELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNL 623

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           R+C DCH+  K++S +  R +I+RD +RFH    GVCSCGDYW
Sbjct: 624 RICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 205/397 (51%), Gaps = 9/397 (2%)

Query: 25  KHTLSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSL 81
           K  L Q A +   +       +L  C S + +R   R+   +IK+        +T+L+ L
Sbjct: 75  KEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVL 134

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNY 141
           + K + L DA  +F+ +P K    +  M+  Y++     +A++  + M   D  P  + +
Sbjct: 135 YNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 194

Query: 142 TYLLKVC-GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
             +L  C G +G    G++IH   I   +   +F  + +++MYAK G+I +A+ +F  +P
Sbjct: 195 ATILTSCYGSLG-FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           ERD+V+   I++G+AQ G  E AL L  ++  EG   + +T  S+L A++ + +L  GK 
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH + +R+G  S V +  +L+DMY+KCG V  AR +FD M  R  +SWN+M+  Y + G 
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373

Query: 321 PEEAMRIFQKMLDQG-VEPTNVTIMEALHACA--DLGDLERGIFVHKLLDQLKLGTDVSM 377
             E + +F+ M ++  V+P ++T +  L  C+   L D+   IF + +  +  +  D+  
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMI 413
              ++ +  +  +V+ A D   K+    T   W +++
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 470


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/720 (32%), Positives = 389/720 (54%), Gaps = 4/720 (0%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K   LS A  +F+ +PD+    +  ++  YA     D+A     +M      P 
Sbjct: 81  MISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPD 140

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAYKM 195
              +T LL  C D        ++H   +  GF  +LF      ++  Y +  +++ A  +
Sbjct: 141 YVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVL 200

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ + ++D V++NT++ G+ ++G    A+ L  +M + G +    T   +L AV  +   
Sbjct: 201 FEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDF 260

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
            +G+ +HG ++  GF    +V   ++  Y+K  RV   R +F+ M   + VS+N +I++Y
Sbjct: 261 ALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSY 320

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            +    EE++ +F++M   G +  N      L   A+L  L+ G  VH         + +
Sbjct: 321 SQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSIL 380

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + NSL+ MY+KC+  D A  IF  L  ++ VSW A+I GY Q G     L  F KMR  
Sbjct: 381 HVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGA 440

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           N++ D  T  +V+ A A  + +   K +HA +IRS   +NVF  + L+DMYAKCG++  A
Sbjct: 441 NLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 500

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
             +F+ M +R+  +WN +I  Y  +G G+AA+  F KM++   +P+ ++ L  + ACSH 
Sbjct: 501 VQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHC 560

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           G VE+G  +F ++   YGI P   HY  M+DLLGR GR  EA   + +MP EP   ++ +
Sbjct: 561 GFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 620

Query: 616 MLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           +L AC+I+KN  L E+AA +LF ++   +   +V ++NIYAAA  W+ +  V+  M ++G
Sbjct: 621 VLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERG 680

Query: 675 LQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVE 733
           ++K P  S VE+ +++H F S    HP    I   +  L  EI+  GY PDT+S + D++
Sbjct: 681 IKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDID 740

Query: 734 DYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVR 793
           + ++   L  HSE+LA+AF L+++  G  I + KNLR C DCH A K IS +  R I  +
Sbjct: 741 EQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 240/522 (45%), Gaps = 41/522 (7%)

Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG---- 213
           + +  ++I  GF+ D       V    + GQ+  A K++D MP ++ VS NT+++G    
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 214 ---------------------------FAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
                                      +A N   + A  L  +M       D++T  ++L
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDS--IVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           P   +         VH +A++ GFD+   + V   L+  Y +  R++ A ++F+ +  ++
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
            V++N++I  Y + G   EA+ +F KM   G +P++ T    L A   L D   G  +H 
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHG 268

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
           L        D S+ N ++  YSK  +V    ++F+++     VS+N +I  Y+Q  +  E
Sbjct: 269 LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEE 328

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           +LN F +M+       +F   +++   A LS ++  + +H   I +  +  + V  +L+D
Sbjct: 329 SLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVD 388

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
           MYAKC     A  +F  +++R   +W  +I GY   GL  A ++LF KM     + +  T
Sbjct: 389 MYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQST 448

Query: 545 FLCAISACS--HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
           F   + A +   S L+ + +H F  + +   +E V    G +VD+  + G + +A    +
Sbjct: 449 FATVLKASAGFASLLLGKQLHAF--IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFE 505

Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPD 642
           +MP    ++ + A++ A   + + E    A  ++ +  L PD
Sbjct: 506 EMPDRNAVS-WNALISAYADNGDGEAAIGAFTKMIQSGLQPD 546



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 5/205 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++   II+SG  +     + LV ++ K  S+ DA +VFE +PD+    ++ ++  YA  
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL-IVNGFSLDLFA 175
              + A+    +M    + P   +   +L  C   G + +G E    +  + G +     
Sbjct: 526 GDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKH 585

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG---FAQNGFAELALDLVTRMH 231
              ++++  + G+  EA K+ D MP E D + W++++     +     AE A + +  M 
Sbjct: 586 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSME 645

Query: 232 EEGRRGDFITIVSILPAVANVGSLR 256
           +      ++++ +I  A     ++R
Sbjct: 646 KLRDAAAYVSMSNIYAAAGKWENVR 670


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 390/697 (55%), Gaps = 9/697 (1%)

Query: 40  RHPSALLL----EVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
            HP+  +L      CT L  + +   L   +++SG        T L+  + K  ++ +A 
Sbjct: 125 EHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEAR 184

Query: 93  RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
            VF+ + +K    + T++ GY K      ++    +MR  +V P  Y  + +L  C  + 
Sbjct: 185 LVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLE 244

Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
            +  GK+IH  ++  G  +D+  +  +++ Y KC +++   K+FD+M  ++++SW T+++
Sbjct: 245 FLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMIS 304

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
           G+ QN F   A+ L   M+  G + D     S+L +  +  +L  G+ VH Y ++A  +S
Sbjct: 305 GYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLES 364

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              V   L+DMYAK   +  A+ VFD M  +NV+S+N+MI  Y       EA+ +F +M 
Sbjct: 365 DEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 424

Query: 333 DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
            +   P+ +T +  L   A L  LE    +H L+ +  +  D+   ++LI +YSKC  V 
Sbjct: 425 VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVK 484

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F ++  K +V WNAM  GY Q+    EAL  +  ++    KP+ FT  ++I A +
Sbjct: 485 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 544

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
            L+ +R+ +  H  +++   +   FV  AL+DMYAKCG++  AR +F+    R V  WN 
Sbjct: 545 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 604

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
           MI  +  HG  + A+ +F +M++   +PN +TF+  +SACSH+G VE+G+++F S+   +
Sbjct: 605 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGF 663

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
           GI+P  +HY  +V LLGR+G+L EA +FI+KMPIEP   V+ ++L AC+I  NVELG+ A
Sbjct: 664 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 723

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A      DP + G ++LL+NI+A+  MW  + KVR  M+   + K PG S +E+ N+V+ 
Sbjct: 724 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNV 783

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           F +  T H ++  I + L+ LI  IK AGYVPD  ++
Sbjct: 784 FIARDTTHREAD-IGSVLDILIQHIKGAGYVPDATAL 819



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 175/569 (30%), Positives = 302/569 (53%), Gaps = 6/569 (1%)

Query: 34  IPS-RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
           IP+ R  R   A LL++  S   +   + I   II SGL         L+++  K + + 
Sbjct: 20  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 79

Query: 90  DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVC 148
           +A  VF+ +P K    + +M+  Y++    ++A+   + + R     P  +    +++ C
Sbjct: 80  NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 139

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             +G + +G ++HG ++ +GF  D++  T +++ Y+K G IEEA  +FD++ E+  V+W 
Sbjct: 140 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 199

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
           TI+AG+ + G + ++L+L  +M E     D   + S+L A + +  L  GK +H Y +R 
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G +  V+V   L+D Y KC RV+  R +FD M  +N++SW +MI+ Y++     EAM++F
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            +M   G +P        L +C     LE+G  VH    +  L +D  + N LI MY+K 
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             +  A  +F  +  + ++S+NAMI GY+   +++EAL  F +MR +   P   T VS++
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              A L  +  +K IH L+I+     ++F  +ALID+Y+KC  V  AR +F+ MNE+ + 
Sbjct: 440 GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 499

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
            WN M  GY  H   + A++L++ +     KPN+ TF   I+A S+   +  G  +   L
Sbjct: 500 VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 559

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
            K  G++       A+VD+  + G + EA
Sbjct: 560 VK-MGLDFCPFVTNALVDMYAKCGSIEEA 587



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 266/494 (53%), Gaps = 11/494 (2%)

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
           ++  ++ P    +  LL++      I   K IHGQ+IV+G   D F    ++N+ +K  +
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 189 IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE-GRRGDFITIVSILP 247
           ++ A  +FD+MP ++L++W+++V+ ++Q G++E AL +   +  + G   +   + S++ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 248 AVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
           A   +G +  G  +HG+ +R+GFD  V V T+L+D Y+K G +E ARLVFD +  +  V+
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 197

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           W ++IA Y + G    ++ +F +M +  V P    +   L AC+ L  LE G  +H  + 
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV- 256

Query: 368 QLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
            L+ GT  DVS+ N LI  Y+KC +V     +F ++  K ++SW  MI GY QN    EA
Sbjct: 257 -LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEA 315

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           +  F +M     KPD F   SV+ +      +   + +HA  I++  E + FV   LIDM
Sbjct: 316 MKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDM 375

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
           YAK   +  A+ +FD+M E++V ++N MI+GY +      A+ELF++M      P+ +TF
Sbjct: 376 YAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTF 435

Query: 546 --LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
             L  +SA   +  + + IH    L   +G+   +    A++D+  +   + +A    ++
Sbjct: 436 VSLLGVSASLFALELSKQIH---GLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492

Query: 604 MPIEPGITVFGAML 617
           M  E  I V+ AM 
Sbjct: 493 MN-EKDIVVWNAMF 505


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 350/573 (61%), Gaps = 2/573 (0%)

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
           + +++ A++   S+   +A+H   +++   +   +   LV  Y + G  + A  +FD + 
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP 100

Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGI 360
            +++VSWNS+I+ +    +    + +  +M  + G++P  VT++  + ACA +G+L+ G 
Sbjct: 101 DKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGK 160

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H +  +  +  +V + NSLI++Y KC  ++ A  +F  +  ++LVSWN+M+  +   G
Sbjct: 161 CIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMG 220

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              + + YF  MR   I  D  T+VS++ A   L V + A+ +H  ++    + N+ + T
Sbjct: 221 LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+D+YAK G +  +  +F  M       W  M+  Y  HG G+ A+E F  M+     P
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVP 340

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           + +TF   +SACSHSGLVEEG +YF  + + YG+E  ++HY  MVDLLGR+G LN+A+  
Sbjct: 341 DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKL 400

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+ MP+EP   V+GA++GAC++  N+ELG++ A RLF LDP +   ++ L+N+Y+AA  W
Sbjct: 401 IKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQW 460

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
              +KVR +M+++ L + PGCS +E  N++H F  G   HP +++IY  LE L+ + +  
Sbjct: 461 RDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREV 520

Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
           G+   T  + HDV++ V+E+L++ HSEKLAIAFGLL ++ G  + I KN+R+CGDCH   
Sbjct: 521 GFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFA 580

Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           K ISL+  R II+RD  RFH F NG+CSCGDYW
Sbjct: 581 KLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 176/320 (55%), Gaps = 3/320 (0%)

Query: 43  SALL--LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           SAL+  +  C+S+   R +   +IKS   +      +LVS + +     DA  +F+ +PD
Sbjct: 42  SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPD 101

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K    +++++ G+++ A L   +  L RMR++  + P       ++  C  VGE+  GK 
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IHG  + +G  L++  +  ++N+Y KCG +E A  +F+ M  + LVSWN++VA     G 
Sbjct: 162 IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGL 221

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           AE  +     M   G   D  T+VS+L A  N+G  ++ +AVHGY +  G D  + ++TA
Sbjct: 222 AEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATA 281

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+D+YAK G +  +  VF GM + + V+W +M+++Y   G   EA+  F+ M+ +GV P 
Sbjct: 282 LLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPD 341

Query: 340 NVTIMEALHACADLGDLERG 359
           +VT    L AC+  G +E G
Sbjct: 342 HVTFTHLLSACSHSGLVEEG 361



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 34/384 (8%)

Query: 179 VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH-EEGRRG 237
           +V+ Y + G  ++A ++FD +P++DLVSWN++++GF++     + L L+ RM  E G + 
Sbjct: 79  LVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKP 138

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           + +T++ ++ A A VG L +GK +HG A+++G    V V  +L+++Y KCG +E A  +F
Sbjct: 139 NEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLF 198

Query: 298 DGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLE 357
           +GM  +++VSWNSM+A +V  G  E+ +  F  M   G+     T++  L AC +LG  +
Sbjct: 199 EGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRK 258

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
               VH  +    L  ++++  +L+ +Y+K   +  +  +F  +     V+W AM+  YA
Sbjct: 259 LAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYA 318

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
            +GR  EA+ +F  M  + + PD  T   ++ A +   ++                KN F
Sbjct: 319 MHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEG-------------KNYF 365

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
            +     MY   G             E  V  ++ M+D  G  G    A +L   M   P
Sbjct: 366 KI-----MYEFYGV------------ELRVEHYSCMVDLLGRSGHLNDAYKLIKSM---P 405

Query: 538 TKPNDITFLCAISACSHSGLVEEG 561
            +PN   +   I AC   G +E G
Sbjct: 406 MEPNSGVWGALIGACRVRGNIELG 429


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/681 (35%), Positives = 381/681 (55%), Gaps = 5/681 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
           SL++ + +   IIKS     ++  + LV+L+ K   L +A  VFE I +K    ++ ++ 
Sbjct: 21  SLQKGKALHAQIIKSSSSCVYIANS-LVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 112 GYAKFASLDDA--VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           GY++      +  +    RMR ++ AP  + +  +      + +   G+  H   I    
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             D+F  + ++NMY K G   EA K+FD MPER+ VSW T+++G+A    A  AL L   
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M  E    +     S+L A+     +  GK +H  A++ G  SIV+V  ALV MYAKCG 
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           ++ A   F+    +N ++W++MI  Y + G+ ++A+++F  M   G+ P+  T +  ++A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C+DLG    G  VH  L +L   + + +  +L+ MY+KC  +  A   F  LQ   +V W
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLW 379

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
            +MI GY QNG   +AL+ + +M  + I P+  TM SV+ A + L+ +   K IHA  ++
Sbjct: 380 TSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
             F   V + +AL  MYAKCG +     +F  M  R V +WN MI G   +G GK A+EL
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499

Query: 530 FNKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           F +M LEG TKP+ +TF+  +SACSH GLVE G  YF  +  ++G++P ++HY  MVD+L
Sbjct: 500 FEEMQLEG-TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDIL 558

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
            RAG+L EA +F +   I+ G+ ++  +LGAC+ ++N ELG  A  +L EL   E   +V
Sbjct: 559 SRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYV 618

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL++IY+A   W+ + +VR +M+ +G+ K PGCS +ELK+ VH F      HPQ   I+ 
Sbjct: 619 LLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHV 678

Query: 709 FLETLIDEIKAAGYVPDTNSI 729
            L  L  ++K  GY P T+S 
Sbjct: 679 ELRQLSKQMKDEGYEPATDSF 699


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/638 (34%), Positives = 381/638 (59%), Gaps = 7/638 (1%)

Query: 82  FC-KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           FC K++S  DA ++F  +  +    ++T+LK  ++    ++ +     M  D+  P  + 
Sbjct: 3   FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL--DLFAMTGVVNMYAKCGQIEEAYKMFDR 198
               LK CG++ E+  G+ IHG  +    +L  DL+  + ++ MY KCG++ EA +MFD 
Sbjct: 63  LPVALKACGELREVNYGEMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRI 257
           + + D+V+W+++V+GF +NG    A++   RM        D +T+++++ A   + + R+
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ VHG+ +R GF + +++  +L++ YAK    + A  +F  +  ++V+SW+++IA YV+
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F  M+D G EP   T++  L ACA   DLE+G   H+L  +  L T+V +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKN 436
           + +L+ MY KC   + A  +FS++  K +VSW A+I G+  NG  + ++  F  M    N
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            +PD+  MV V+ + +EL  +  AK  H+ VI+  F+ N F+  +L+++Y++CG++G A 
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP-TKPNDITFLCAISACSHS 555
            +F+ +  +    W  +I GYG HG G  A+E FN M++    KPN++TFL  +SACSH+
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GL+ EG+  F  +  DY + P ++HY  +VDLLGR G L+ A +  ++MP  P   + G 
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 541

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +LGAC+IH+N E+ E  A +LFEL+ +  GY++L++N+Y     W+ + K+R  ++++G+
Sbjct: 542 LLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETL 713
           +K    SL+E++ +VH F +    HP+ + +Y  L+ L
Sbjct: 602 KKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 199/422 (47%), Gaps = 12/422 (2%)

Query: 14  NSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCD 70
           N +P Q +   +  +      P R+       L+  CT L   R    +   +I+ G  +
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRV---TLITLVSACTKLSNSRLGRCVHGFVIRRGFSN 196

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
                  L++ + K  +  +A  +F+ I +K    + T++  Y +  +  +A+     M 
Sbjct: 197 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM 256

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
            D   P V     +L+ C    ++ +G++ H   I  G   ++   T +V+MY KC   E
Sbjct: 257 DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 316

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSILPAV 249
           EAY +F R+P +D+VSW  +++GF  NG A  +++  + M  E   R D I +V +L + 
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376

Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
           + +G L   K  H Y ++ GFDS   +  +LV++Y++CG +  A  VF+G+  ++ V W 
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLL-D 367
           S+I  Y   G   +A+  F  M+    V+P  VT +  L AC+  G +  G+ + KL+ +
Sbjct: 437 SLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN 496

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA---QNGRVNE 424
             +L  ++     L+ +  +   +D A +I  ++           +LG     QNG + E
Sbjct: 497 DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAE 556

Query: 425 AL 426
            +
Sbjct: 557 TV 558


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/781 (31%), Positives = 411/781 (52%), Gaps = 39/781 (4%)

Query: 70  DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM 129
           D HL    +++ + K   + DA  VF  +       Y  ++  ++K     +A+    RM
Sbjct: 136 DTHL-GNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRM 194

Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
           R   + P  Y++  +L  C    E+  G ++H   I  G+S  +F    ++ +Y KCG +
Sbjct: 195 RISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCL 254

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPA 248
           + A  +FD MP+RD+ SWNT+++   +    E AL+L   +++ +G + D  T+ ++L A
Sbjct: 255 DHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTA 314

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            A   +   G+ +H YA+R G ++ ++VS A++  Y +CG +     +F+ M  R++++W
Sbjct: 315 CARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITW 374

Query: 309 NSMIAAYVEGG-----------NPEE--------------------AMRIFQKMLDQGVE 337
             MI AY+E G            PE+                    A+ +F +M+ +G E
Sbjct: 375 TEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAE 434

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
            T+ T+   ++AC  L  LE    +H  + +    ++  +  +LI M SKC ++D A  +
Sbjct: 435 LTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRM 494

Query: 398 FSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAEL 454
           F  L   G   +   +MI GYA+NG   EA+  F + +S+  +  D     S++     L
Sbjct: 495 FQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTL 554

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMI 514
                 K IH   +++ F   + V  ++I MY+KC  +  A   F+ M    V +WN +I
Sbjct: 555 GFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLI 614

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA--CSHSGLVEEGIHYFTSLKKDY 572
            G   H  G  A+ +++ M +   KP+ ITF+  +SA   + S L++E    F S+K  +
Sbjct: 615 AGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIH 674

Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
            +EP  +HY ++V +LG  G L EA + I KMP +P ++V+ A+L  C++H N  +G++ 
Sbjct: 675 DLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRV 734

Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
           A  +  ++P +   +VL++N+YAA+  W     VR  M  +GL+K P  S V +K ++H+
Sbjct: 735 AKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHT 794

Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIA 751
           FY+    HPQS  IY+ L+ LI +   AGY PD + +  +VE+  +++ L  HS KLA  
Sbjct: 795 FYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAAT 854

Query: 752 FGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           +GLL + PG  I + KN+ +C DCH   KY ++VT REII RD   FHCF NG CSC  Y
Sbjct: 855 YGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGY 914

Query: 812 W 812
           W
Sbjct: 915 W 915


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/575 (40%), Positives = 337/575 (58%), Gaps = 61/575 (10%)

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP-------------- 338
           AR +FD +   +V SWN M   Y     P+  + ++ +ML++ V+P              
Sbjct: 67  ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR 126

Query: 339 --------------------TNVTIMEAL---HACADLGDLERGIFVHKLLDQLKLGTDV 375
                               +NV    AL   ++   L D+ RGIF       +   +DV
Sbjct: 127 SVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIF------DMSCKSDV 180

Query: 376 SMTNSLISMYSKCKK-----------------VDRAADIFSKLQGKTLVSWNAMILGYAQ 418
              N++IS Y++ KK                 VD A   F K+  +  VSW AMI GY +
Sbjct: 181 VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
                EAL  F +M++  IKPD FTMVSV+ A A+L  +   +WI   + ++  + + FV
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFV 300

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             ALIDMY KCG V  A ++F+ + +R   TW  M+ G   +G G+ A+ +F++ML+   
Sbjct: 301 GNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASV 360

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            P+++T++  +SAC+H+G+V+EG  +F S+   +GIEP + HYG MVDLLG+AG L EA 
Sbjct: 361 TPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAH 420

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
           + I+ MP++P   V+GA+LGAC+IHK+ E+ E+A  ++ EL+P+ G  +VL  NIYAA +
Sbjct: 421 EIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACN 480

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            WDKL ++R +M  +G++KTPGCSL+E+   VH F +G   HPQ+K IY  L  +  ++K
Sbjct: 481 KWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLK 540

Query: 719 AAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHN 777
            AGY P+T+ +  D+ +  +EN +  HSEKLAIAFGL+NS PG TI I KNLR+C DCH+
Sbjct: 541 IAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHH 600

Query: 778 ATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
             K +S V  RE+IVRD  RFH F++G CSC DYW
Sbjct: 601 VAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 210/470 (44%), Gaps = 58/470 (12%)

Query: 126 LIRMRYDDVAPVVYNYTY-LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
           +I M     +PV  N    L + C  +  +   K+IH + I  G   +      +++   
Sbjct: 1   MISMACSQSSPVTENPPLSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCC 57

Query: 185 --KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
             + G +  A ++FD +PE  + SWN +  G+++    +L + L   M E   + D  T 
Sbjct: 58  SREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTY 117

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             +        +L++G+ +H + ++ G DS V    AL++MY+ CG ++ AR +FD    
Sbjct: 118 PFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCK 177

Query: 303 RNVVSWNSMIAAY-----------------VEGGN-----------PE------------ 322
            +VV+WN+MI+ Y                 V  G            PE            
Sbjct: 178 SDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDG 237

Query: 323 --------EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
                   EA+ +F++M    ++P   T++  L ACA LG LE G ++   +D+ K+  D
Sbjct: 238 YLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKND 297

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
             + N+LI MY KC  V+ A  IF+ L  +   +W AM++G A NG   EALN F +M  
Sbjct: 298 TFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLK 357

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            ++ PD  T V V+ A     ++    K+  ++  R   E N+     ++D+  K G + 
Sbjct: 358 ASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLK 417

Query: 494 TARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
            A  +  +M  + +   W  ++     H   + A     ++LE   +PN+
Sbjct: 418 EAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILE--LEPNN 465



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 195/430 (45%), Gaps = 52/430 (12%)

Query: 36  SRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC--KYNSLSDAAR 93
           S +  +P   L E C S+  L++I    IK+G+    + Q K++S  C  ++  +  A +
Sbjct: 10  SPVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQ 69

Query: 94  VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
           +F+ IP+     ++ M KGY++ A     VS  + M   +V P  Y Y +L K       
Sbjct: 70  LFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVA 129

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           ++ G+E+H  ++  G   ++FA   ++NMY+ CG I+ A  +FD   + D+V+WN +++G
Sbjct: 130 LQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISG 189

Query: 214 FAQ-------------------------------------------NGFAEL-----ALD 225
           + +                                           +G+  L     AL 
Sbjct: 190 YNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALM 249

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M     + D  T+VS+L A A +G+L +G+ +  Y  +    +   V  AL+DMY 
Sbjct: 250 LFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYF 309

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG VE A  +F+ +  R+  +W +M+      G  EEA+ +F +ML   V P  VT + 
Sbjct: 310 KCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVG 369

Query: 346 ALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
            L AC   G ++ G  F   +  +  +  +++    ++ +  K   +  A +I   +  K
Sbjct: 370 VLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMK 429

Query: 405 -TLVSWNAMI 413
              + W A++
Sbjct: 430 PNSIVWGALL 439



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 4/267 (1%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T +V+ F     +  A + F  +P++    +  M+ GY +     +A+     M+   + 
Sbjct: 201 TAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIK 260

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
           P  +    +L  C  +G +  G+ I   +  N    D F    +++MY KCG +E A  +
Sbjct: 261 PDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSI 320

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F+ +P+RD  +W  +V G A NG  E AL++ ++M +     D +T V +L A  + G +
Sbjct: 321 FNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMV 380

Query: 256 RIGKAVHG-YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
             GK        R G +  +     +VD+  K G ++ A  +   M  + N + W +++ 
Sbjct: 381 DEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLG 440

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           A     + E A R  +++L+  +EP N
Sbjct: 441 ACRIHKDAEMAERAIEQILE--LEPNN 465


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/684 (34%), Positives = 390/684 (57%), Gaps = 9/684 (1%)

Query: 50  CTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD--KLDA 104
           CT  K +   R +   I+K+G           ++L+ K N LS A  +F+ I D  K D 
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 105 LYHTMLKGYAK---FASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
            +++++  +++    +S   A+S   RM R ++V P  +    +     ++ ++  GK+ 
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +  G S D++  + ++NMY K G + +A K+FDRMPER+ VSW T+++G+A +  A
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           + A+++   M  E    +   + S+L A+ +   +  G+ VH  A++ G  +IV+V+ AL
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           V MYAKCG ++ A   F+    +N ++W++M+  Y +GG+ ++A+++F KM   GV P+ 
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
            T++  ++AC+DL  +  G  +H    +L  G  + + ++++ MY+KC  +  A   F  
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFEC 380

Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
           +Q   +V W ++I GY QNG     LN + KM+ + + P+  TM SV+ A + L+ +   
Sbjct: 381 VQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQG 440

Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
           K +HA +I+  F+  V + +AL  MY KCG++     +F  M  R V +WN MI G   +
Sbjct: 441 KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQN 500

Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDH 580
           G G  A+ELF KML    KP+ +TF+  +SACSH GLV+ G  YF  +  ++ I P+++H
Sbjct: 501 GHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEH 560

Query: 581 YGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
           Y  MVD+L RAG+LNEA +FI+   ++ G+ ++  +LGACK H+N ELG  A  +L EL 
Sbjct: 561 YACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELG 620

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
             E   +VLL++IY A    + + +VR IM+ +G+ K PGCS +ELK  VH F  G  +H
Sbjct: 621 SPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQH 680

Query: 701 PQSKRIYTFLETLIDEIKAAGYVP 724
           PQ   I   LE L   +   GY P
Sbjct: 681 PQVDEIRLELELLTKLMIDEGYQP 704



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           P +  +++ L  C    ++ +G  +H  + +    + + +TN+ +++Y+K   +  A  +
Sbjct: 9   PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 398 FSKL--QGKTLVSWNAMILGYAQNGRVNE---ALNYFCK-MRSKNIKPDSFTMVSVIPAL 451
           F  +    K  VSWN++I  ++QN   +    A++ F + MR+ N+ P++ T+  V  A 
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           + LS +   K  H++ +++    +V+V ++L++MY K G V  AR LFD M ER+  +W 
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            MI GY +  +   AVE+F  M       N+      +SA +    V  G     SL   
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTG-RQVHSLAIK 247

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEA 597
            G+  ++    A+V +  + G L++A
Sbjct: 248 NGLLAIVSVANALVTMYAKCGSLDDA 273


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/655 (37%), Positives = 366/655 (55%), Gaps = 47/655 (7%)

Query: 192 AYKMFDRMPERDLVSWNT-IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           A ++ + +P R LV+     VAG+A             RM   G   D  T   +L AVA
Sbjct: 8   ARRLLEGIPRRCLVAAREDAVAGYA-------------RMLARGAMPDAYTFPPLLKAVA 54

Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
              S    +AVH + ++ G     +V+T+LV  YA  G    AR +    +    V WN+
Sbjct: 55  RGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNA 114

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD-LGDLERGIFVHKLLDQL 369
           +I+ +       EA   F  M   G  PT VT +  L AC    GD+  G+ VH  +   
Sbjct: 115 LISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS 174

Query: 370 KLGTDVSMTNSLISMYSKCK-------------------------------KVDRAADIF 398
            +  D+ + N+L+ MY++C                                +VD A D+F
Sbjct: 175 GVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLF 234

Query: 399 SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIR 458
            ++  +  VSW AMI GY Q  R  EAL  F +M+  N+  D FTMVSVI A A+L  + 
Sbjct: 235 GRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALE 294

Query: 459 YAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG 518
             +W+   + R   + + FV  ALIDMY+KCG++  A  +F  M+ R   TW  +I G  
Sbjct: 295 MGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLA 354

Query: 519 THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVM 578
            +G G+ A+E+F++M+     P+++TF+  ++AC+H+GLV++G  +F S+++ Y I P +
Sbjct: 355 VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNV 414

Query: 579 DHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE 638
            HYG ++DL GRAG++ EA D I +MP+ P  T++G +L AC++H N E+GE    RL +
Sbjct: 415 VHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQ 474

Query: 639 LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGST 698
           +DP+    + LL+NIYA  + W+ + ++R  + +KG++K PGCSL+E+   +H F +G  
Sbjct: 475 MDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQ 534

Query: 699 KHPQSKRIYTFLETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNS 757
            HP SK IY  LE++I+++   GY PD T    +V +  ++ +L  HSEKLAIAF LL+S
Sbjct: 535 SHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSS 594

Query: 758 SPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            P + I I KNLR+C DCHNA K IS + GRE++VRD  RFH F++G CSC DYW
Sbjct: 595 EPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 201/472 (42%), Gaps = 39/472 (8%)

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
           A+ +DAV+   RM      P  Y +  LLK           + +H  ++  G   +    
Sbjct: 22  AAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVA 81

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ-NGFAELALDLVTRMHEEGR 235
           T +V  YA  G    A  +         V WN +++G  +   F E     V  M   G 
Sbjct: 82  TSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVD-MARAGA 140

Query: 236 RGDFITIVSILPAVAN-VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
               +T VS+L A     G + +G  VHG  + +G    + V  ALVDMYA+C  +E+A 
Sbjct: 141 APTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAW 200

Query: 295 LVFDGMKSRNVVSWNS-------------------------------MIAAYVEGGNPEE 323
            +FDGM+ R+VVSW S                               MI  YV+     E
Sbjct: 201 KLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFRE 260

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
           A+ +F++M    V     T++  + ACA LG LE G +V   + +  +  D  + N+LI 
Sbjct: 261 ALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALID 320

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
           MYSKC  ++RA D+F  +  +   +W A+ILG A NG   EA+  F +M   +  PD  T
Sbjct: 321 MYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVT 380

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFE--KNVFVMTALIDMYAKCGAVGTARALFDM 501
            + V+ A     ++   +    L +R  +    NV     +ID++ + G +  A    D 
Sbjct: 381 FIGVLTACTHAGLVDKGREFF-LSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQ 439

Query: 502 MN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
           M    + T W  ++     HG  +    +  ++L+  P      T L  I A
Sbjct: 440 MPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYA 491



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 36/432 (8%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           +S   +R +   ++K G+       T LV+ +      + A  +          +++ ++
Sbjct: 57  SSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALI 116

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD-VGEIRRGKEIHGQLIVNGF 169
            G+ +     +A    + M     AP    Y  +L  CG   G++  G ++HG+++ +G 
Sbjct: 117 SGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGV 176

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFD-------------------------------R 198
             DL     +V+MYA+C  +E A+K+FD                               R
Sbjct: 177 LPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGR 236

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPERD VSW  ++ G+ Q      AL++   M       D  T+VS++ A A +G+L +G
Sbjct: 237 MPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMG 296

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + V  Y  R G      V  AL+DMY+KCG +E A  VF  M  R+  +W ++I      
Sbjct: 297 EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVN 356

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSM 377
           G  EEA+ +F +M+     P  VT +  L AC   G +++G  F   + +   +  +V  
Sbjct: 357 GYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVH 416

Query: 378 TNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
              +I ++ +  K+  A D   ++        W  ++     +G  N  +      R   
Sbjct: 417 YGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG--NSEIGELVTERLLQ 474

Query: 437 IKPDSFTMVSVI 448
           + P++ T+ +++
Sbjct: 475 MDPENSTVYTLL 486


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/733 (34%), Positives = 388/733 (52%), Gaps = 86/733 (11%)

Query: 86  NSLSDAAR-VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
           N   D AR VF+ +      LY  M+ GYA+    D A+     M   DV     ++  +
Sbjct: 8   NQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVV----SWNSM 63

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
           +K C D                                   C  +  A K+FD MPER +
Sbjct: 64  IKGCFD-----------------------------------CADLTMARKLFDEMPERSV 88

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
           VSW T++ GF Q G  E+A  L  +M        F  I                      
Sbjct: 89  VSWTTMINGFLQFGKIEVAEGLFYKM-------PFRDI---------------------- 119

Query: 265 AMRAGFDSIVNVSTALVDMYAKC--GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPE 322
              A ++S++         Y  C  GRVE    +F  M  RNV+SW SMI    + G  E
Sbjct: 120 ---AAWNSMI---------YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSE 167

Query: 323 EAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
           EA+ +F++M+  GVE  PT+ T    + ACA+   L +G+ +H  + +L    D  ++ +
Sbjct: 168 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAA 227

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
           LI+ Y+ CK+++ +  +F       +V W A++ GY  N +  +AL  F +M  + + P+
Sbjct: 228 LITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPN 287

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
             +  S + +   L  + + + IH   ++   E +VFV  +LI MY +CG +     +F 
Sbjct: 288 QSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFK 347

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
            ++++++ +WN +I G   HG G  A+  FN+M+    +P++ITF   +SACSHSG+ ++
Sbjct: 348 RISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQK 407

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
           G   F    ++   E  +DHY  MVD+LGR+G+L EA + I+ MP++    V+  +L AC
Sbjct: 408 GRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSAC 467

Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
            +H  +E+ E+AA  + +L+P     +VLL+N+YA+AS W  ++++R  M+++G+ K PG
Sbjct: 468 TMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPG 527

Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQEN 739
            S + +K   + F SG   HP S RIY  LE L  ++K  GYVPD   ++HDVED  +E 
Sbjct: 528 RSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEV 587

Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
           +LS HSE+LAI FGL+++  GSTI + KNLRVCGDCH+A K I+ +  R+IIVRD  RFH
Sbjct: 588 MLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFH 647

Query: 800 CFKNGVCSCGDYW 812
            F +G CSCGDYW
Sbjct: 648 HFMDGRCSCGDYW 660



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 140/291 (48%), Gaps = 2/291 (0%)

Query: 82  FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD--DVAPVVY 139
           +C    + D  R+F+ +P +    + +M+ G  +    ++A+    +M     +V P   
Sbjct: 129 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 188

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y  ++  C +   + +G +IH  +   G+S D +    ++  YA C Q+E++ ++F   
Sbjct: 189 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 248

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
              ++V W  +V G+  N   E AL +   M  EG   +  +  S L +   + +L  G+
Sbjct: 249 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 308

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  A++ G ++ V V  +L+ MY +CG +    ++F  +  +N+VSWNS+I    + G
Sbjct: 309 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 368

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
               A+  F +M+   VEP  +T    L AC+  G  ++G  + K   + K
Sbjct: 369 CGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENK 419



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 25/208 (12%)

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI--- 437
           +I+ + + +++D A  +F K+    +  +  MI GYA+N R + AL  F +M  K++   
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60

Query: 438 --------KPDSFTMV-SVIPALAELSVIRYAKWIHALVIRSCFE-----------KNVF 477
                        TM   +   + E SV+ +   I+  +     E           +++ 
Sbjct: 61  NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG- 536
              ++I  Y   G V     LF  M  R+V +W  MI G   HG  + A+ LF +M+   
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180

Query: 537 -PTKPNDITFLCAISACSHSGLVEEGIH 563
              KP   T+ C I+AC+++  + +G+ 
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQ 208


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/761 (33%), Positives = 406/761 (53%), Gaps = 17/761 (2%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +IK+        Q  L++++CK      A ++F+ +       Y++++ GY + ++LD  
Sbjct: 85  MIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKV 144

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +    + R   +    Y     L  C   G +  GK IHG ++V G    +     +++M
Sbjct: 145 MILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDM 204

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+KCGQ++ A  +FD   + D VSWN+++AG+ QNG  E  L ++ +MH+ G   +  T+
Sbjct: 205 YSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTL 264

Query: 243 VSILPAVANV--GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
            S L A ++   G    G  +H +A++ G    V V TAL+DMYAK G ++ A  +FD M
Sbjct: 265 GSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM 324

Query: 301 KSRNVVSWNSMIAAYVEGGNPEE-----AMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
             +NVV +N+M+A  ++    E+     A+ +F +M   G++P+  T    L AC  + D
Sbjct: 325 VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVED 384

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
            +    VH L+ +  L +D  + + LI +YS    +  A   F+ +   T+V   AMI G
Sbjct: 385 FKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXG 444

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y QNG    AL+ F ++ +   KPD F   +++ + A + ++R  + I     +    + 
Sbjct: 445 YLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRF 504

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
                + I MYAK G +  A   F  M    + +W+ MI     HG    A+  F  M  
Sbjct: 505 TIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKS 564

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +PN   FL  + ACSH GLVEEG+ YF +++KDY ++  + H   +VDLLGRAGRL 
Sbjct: 565 CGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLA 624

Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
           +A   I ++  E    ++ A+L AC+IHK+    ++ A ++ EL+P     +VLL NIY 
Sbjct: 625 DAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYM 684

Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
            A      +KVRT+ME++ ++K PG S +++ ++V+SF SG   H  S +IY  L+ ++ 
Sbjct: 685 DAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLA 744

Query: 716 EIKAAGYVPDTNSIHDVEDYVQENL----LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRV 771
             K        +S  D+  Y  E+     ++ HSEKLA+AFG+L  S  + + + KNLR+
Sbjct: 745 TTKR------LDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRI 798

Query: 772 CGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           C DCH   K  S+V  RE+IVRD  RFH FK+G CSCGDYW
Sbjct: 799 CLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 259/507 (51%), Gaps = 13/507 (2%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
           +Y  L++     G++  GK +H  +I   F   LF    ++NMY KCG    A K+FD+M
Sbjct: 61  DYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKM 120

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
            + ++V++N++++G+ Q    +  + L  +    G + D  T    L A +  G+L  GK
Sbjct: 121 SKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGK 180

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +HG  +  G  S V ++ +L+DMY+KCG+V+ AR++FD     + VSWNS+IA YV+ G
Sbjct: 181 MIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNG 240

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD--LGDLERGIFVHKLLDQLKLGTDVSM 377
             EE + I QKM   G+     T+  AL AC+    G    G  +H    +L L  DV +
Sbjct: 241 KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVV 300

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE-----ALNYFCKM 432
             +L+ MY+K   +D A  IF ++  K +V +NAM+ G  Q   + +     ALN F +M
Sbjct: 301 GTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEM 360

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           +S  IKP  FT  S++ A   +   ++AK +HAL+ ++    + ++ + LID+Y+  G++
Sbjct: 361 KSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSM 420

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A   F+ ++   +     MI GY  +G  ++A+ LF ++L    KP++      +S+C
Sbjct: 421 MDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSC 480

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           ++ G++  G        K  GI        + + +  ++G L  A    Q+M   P I  
Sbjct: 481 ANMGMLRSGEQIQGHATK-VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME-NPDIVS 538

Query: 613 FGAMLGACKIHKNVELGEKAANRLFEL 639
           +  M+ +   H +       A R FEL
Sbjct: 539 WSTMICSNAQHGHA----MEALRFFEL 561



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 181/368 (49%), Gaps = 17/368 (4%)

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           MF  +P     S    +  FA  G   L+   V   +      + +  V ++ +    G 
Sbjct: 19  MFHMLP----FSSRQSIESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGK 74

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  GK VH + ++  F   + +   L++MY KCG   +A  +FD M   N+V++NS+I+ 
Sbjct: 75  LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           YV+  N ++ M +F K    G++    T   AL AC+  G+L  G  +H L+    LG+ 
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQ 194

Query: 375 VSMTNSLISMYSKCKKVDRAADIF---SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
           V +TNSLI MYSKC +VD A  +F    KL G   VSWN++I GY QNG+  E L    K
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDG---VSWNSLIAGYVQNGKYEELLTILQK 251

Query: 432 MRSKNIKPDSFTMVSVIPALAE--LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
           M    +  +++T+ S + A +        +   +H   I+     +V V TAL+DMYAK 
Sbjct: 252 MHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKT 311

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTH-----GLGKAAVELFNKMLEGPTKPNDIT 544
           G++  A  +FD M +++V  +N M+ G              A+ LF +M     KP+  T
Sbjct: 312 GSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFT 371

Query: 545 FLCAISAC 552
           +   + AC
Sbjct: 372 YSSLLKAC 379



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 11/489 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAK 115
           + I  LI+  GL  Q +    L+ ++ K   + D AR+     DKLD + +++++ GY +
Sbjct: 180 KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQV-DYARILFDHSDKLDGVSWNSLIAGYVQ 238

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD--VGEIRRGKEIHGQLIVNGFSLDL 173
               ++ ++ L +M  + +A   Y     LK C     G    G  +H   I  G  LD+
Sbjct: 239 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 298

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE-----LALDLVT 228
              T +++MYAK G +++A ++FD+M ++++V +N ++AG  Q    E      AL+L  
Sbjct: 299 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 358

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M   G +    T  S+L A   V   +  K VH    + G  S   + + L+D+Y+  G
Sbjct: 359 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 418

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            +  A L F+ + +  +V   +MI  Y++ G  E A+ +F ++L    +P        + 
Sbjct: 419 SMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMS 478

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           +CA++G L  G  +     ++ +       NS I MY+K   +  A   F +++   +VS
Sbjct: 479 SCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVS 538

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           W+ MI   AQ+G   EAL +F  M+S  I+P+ F  + V+ A +   ++    ++   + 
Sbjct: 539 WSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTME 598

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAA 526
                + +V     ++D+  + G +  A +L   +  E     W  ++     H     A
Sbjct: 599 KDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTA 658

Query: 527 VELFNKMLE 535
             +  K++E
Sbjct: 659 QRVAQKVIE 667



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 20/349 (5%)

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +V  ++ + +    G L  G  VH  + +      + + N+L++MY KC     A  +F 
Sbjct: 59  SVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFD 118

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           K+    +V++N++I GY Q   +++ +  F K R   +K D +T    + A ++   +  
Sbjct: 119 KMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSA 178

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            K IH L++       V +  +LIDMY+KCG V  AR LFD  ++    +WN +I GY  
Sbjct: 179 GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQ 238

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
           +G  +  + +  KM +     N  T   A+ ACS +     G   F ++  D+ I+  + 
Sbjct: 239 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFGTMLHDHAIKLGL- 294

Query: 580 HYG-----AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVE--LGEKA 632
           H       A++D+  + G L++A     +M ++  + ++ AM+      + +E     KA
Sbjct: 295 HLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKCAYKA 353

Query: 633 ANRLFEL-----DPDEGGYHVLLANIYAAASMWDKLAK-VRTIMEKKGL 675
            N  FE+      P    Y  LL           K AK V  +M K GL
Sbjct: 354 LNLFFEMKSCGIKPSMFTYSSLLKACIIVEDF--KFAKQVHALMCKNGL 400



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 23/306 (7%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C  +++ +   ++  L+ K+GL       + L+ L+    S+ DA   F  I +  
Sbjct: 375 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLT 434

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
                 M+ GY +    + A+S    +   +  P  +  + ++  C ++G +R G++I G
Sbjct: 435 IVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQG 494

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                G S         + MYAK G +  A   F +M   D+VSW+T++   AQ+G A  
Sbjct: 495 HATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAME 554

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-----KAVHGYAMRAGFDSIVNVS 277
           AL     M   G   +    + +L A ++ G +  G          Y M+      V V 
Sbjct: 555 ALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV- 613

Query: 278 TALVDMYAKCGRVETA-----RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              VD+  + GR+  A     RL F+       V W ++++A     +   A R+ QK++
Sbjct: 614 ---VDLLGRAGRLADAESLILRLGFE----HEPVMWRALLSACRIHKDTVTAQRVAQKVI 666

Query: 333 DQGVEP 338
           +  +EP
Sbjct: 667 E--LEP 670


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/479 (45%), Positives = 310/479 (64%), Gaps = 5/479 (1%)

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
           PT       L +C     ++ G  +H  +     G D  +   L+++Y  C  +  A  +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F ++    +  WN +I GYA NG    A+  + +M    + PD+FT   V+ A A LS I
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH---VTTWNVMI 514
            + + IH  V+++ +EK+VFV  ALIDMYAKCG VG+AR +FD +  R    V +WN MI
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMI 252

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
            GY  HG    A++LF +M     KP+ ITF+  +SACSH GL+EEG  +F ++ +DY I
Sbjct: 253 TGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKI 311

Query: 575 EPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN 634
           +P + HY  MVDLLG +GRL+EA++ I +M + P   V+GA+L +CKIH NVELGE A  
Sbjct: 312 DPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALE 371

Query: 635 RLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFY 694
           RL EL+PD+ G +V+L+NIYA A  W+ +AK+R +M  + L+K+  CS +E+KN+VH+F 
Sbjct: 372 RLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFL 431

Query: 695 SGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFG 753
           SG T HP S  IY+ LE +   +K AGY P T S+ HDVED  + N++ SHSE+LAIAFG
Sbjct: 432 SGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFG 491

Query: 754 LLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           L+++ PG+ + I KNLR+C DCH A K+IS +T REI VRD++R+H FK+GVCSCGDYW
Sbjct: 492 LISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 156/287 (54%), Gaps = 10/287 (3%)

Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           + P   NY  LL+ C     I+ GK++H Q+ + GF  D    T +VN+Y  C  +  A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
            +FDR+P+ ++  WN ++ G+A NG  E A+ L  +M + G   D  T   +L A A + 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN---VVSWNS 310
           ++  G+ +H + ++ G++  V V  AL+DMYAKCG V +AR VFD +  R+   VVSWN+
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQL 369
           MI  Y   G+  EA+ +F++M ++  +P ++T +  L AC+  G LE G +F   ++   
Sbjct: 251 MITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS---WNAMI 413
           K+   V     ++ +     ++D A ++   +Q K L     W A++
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLI--MQMKVLPDSGVWGALL 354



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%), Gaps = 16/346 (4%)

Query: 44  ALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A LL+ C + K ++   ++   +  +G     +  TKLV+L+C  +SLS A  +F+ IP 
Sbjct: 79  ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               L++ +++GYA     + AV    +M    + P  + + ++LK C  +  I  G+EI
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD---LVSWNTIVAGFAQN 217
           H  ++  G+  D+F    +++MYAKCG +  A ++FD++  RD   +VSWN ++ G+A +
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMH 258

Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNV 276
           G A  ALDL   M+    + D IT V +L A ++ G L  G       +R    D  V  
Sbjct: 259 GHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQH 317

Query: 277 STALVDMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
            T +VD+    GR++ A  +   MK   +   W +++ +     N E      +++++  
Sbjct: 318 YTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIE-- 375

Query: 336 VEPT---NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
           +EP    N  I+  ++A A  G  E    + KL+   +L   ++ +
Sbjct: 376 LEPDDAGNYVILSNIYAQA--GKWEGVAKLRKLMTDRRLKKSIACS 419



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
            S  + P      S++ +      I+  K +HA V  + F  +  + T L+++Y  C ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
            +AR LFD + + ++  WNV+I GY  +G  +AAV+L+ +M +    P++ TF   + AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 553 SHSGLVEEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           +    +E G  IH     T  +KD  +        A++D+  + G +  A +   K+ + 
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVG------AALIDMYAKCGCVGSAREVFDKILVR 240

Query: 608 PGITV--FGAMLGACKIH 623
             + V  + AM+    +H
Sbjct: 241 DAVLVVSWNAMITGYAMH 258


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/668 (35%), Positives = 391/668 (58%), Gaps = 3/668 (0%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           L IKSG          ++S + K   +  A+++F     +    ++TM+ G+    + + 
Sbjct: 24  LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFET 83

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+ FL  M+    A   Y++  +LK    VG +  G+++H  ++  G+  ++FA + +++
Sbjct: 84  ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MYAKC ++E+A+++F  +  R+ V+WN +++G+AQ G    A  L+  M  EG   D  T
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203

Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG-M 300
              +L  + +    ++   VH   ++ G  S   V  A++  Y++CG +E A  VFDG +
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAI 263

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
           ++R++V+WNSM+AAY+     EEA ++F +M   G EP   T    + A  +     +G 
Sbjct: 264 ETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGK 323

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMY--SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
            +H L+ +  L   V ++NSLI+MY  S  K +D A +IF  L+ K  VSWN+++ G++Q
Sbjct: 324 SLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQ 383

Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           +G   +AL +F  MRS+ +  D +   +V+ + ++L+ ++  + +H LV++S FE N FV
Sbjct: 384 SGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFV 443

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
            ++LI MY+KCG +  AR  FD   +     WN +I GY  HG GK A++LF  M +   
Sbjct: 444 ASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRV 503

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
           K + ITF+  ++ACSH GLVEEG  +  S++ DYGI P M+HY  M+DLLGRAGRL+EA 
Sbjct: 504 KLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAK 563

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAAS 658
             I+ MP EP   V+  +LGAC+   ++EL  + A+ L EL+P+E   +VLL++++    
Sbjct: 564 ALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLR 623

Query: 659 MWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIK 718
            W++ A ++ +M+++G++K PG S +E+KNEV SF +    HP  + IY  L  L++EI+
Sbjct: 624 RWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIR 683

Query: 719 AAGYVPDT 726
              YV ++
Sbjct: 684 RLDYVANS 691



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 227/461 (49%), Gaps = 8/461 (1%)

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   I +G +  ++    +++ YAKCG+I  A KMF    +RD VSWNT++AGF   G  
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           E AL+ +  M   G   D  +  SIL  VA VG + +G+ VH   ++ G++  V   +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +DMYAKC RVE A  VF  +  RN V+WN++I+ Y + G+   A  +   M  +GVE  +
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIF-S 399
            T    L    D    +    VH  + +  L +D ++ N++I+ YS+C  ++ A  +F  
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            ++ + LV+WN+M+  Y  N +  EA   F +M+    +PD +T  SVI A  E S    
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQ 321

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL--FDMMNERHVTTWNVMIDGY 517
            K +H LVI+   E  V +  +LI MY K  +     AL  F+ +  +   +WN ++ G+
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
              GL + A++ F  M       +   F   + +CS    ++ G      + K  G EP 
Sbjct: 382 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-GFEPN 440

Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT----VFG 614
                +++ +  + G + +A       P +  I     +FG
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFG 481



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 239/485 (49%), Gaps = 7/485 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++  +++K G        + L+ ++ K   + DA  VF+ I  +    ++ ++ GYA+ 
Sbjct: 120 QQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
                A   L  M  + V      +  LL +  D    +   ++H +++ +G + D    
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
             ++  Y++CG IE+A ++FD   E RDLV+WN+++A +  N   E A  L   M   G 
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGF 299

Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK--CGRVETA 293
             D  T  S++ A         GK++HG  ++ G + +V +S +L+ MY K     ++ A
Sbjct: 300 EPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359

Query: 294 RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
             +F+ +++++ VSWNS++  + + G  E+A++ F+ M  Q V   +      L +C+DL
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDL 419

Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
             L+ G  VH L+ +     +  + +SLI MYSKC  ++ A   F      + ++WN++I
Sbjct: 420 ATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLI 479

Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF- 472
            GYAQ+GR   AL+ F  M+ + +K D  T V+V+ A + + ++    W     + S + 
Sbjct: 480 FGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG-WSFLKSMESDYG 538

Query: 473 -EKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELF 530
               +     +ID+  + G +  A+AL + M  E     W  ++    T G  + A ++ 
Sbjct: 539 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 598

Query: 531 NKMLE 535
           + +LE
Sbjct: 599 SHLLE 603


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/514 (42%), Positives = 324/514 (63%), Gaps = 1/514 (0%)

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M+  + VSWNS+I   V  G  E+A+  FQKM  + ++    T+   L++ A +  ++  
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
           I VH L+ +        + N+LI MY+K  K+D A  +FSK+  K +VSW +++ GY+ N
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G   EA+  FCKMR   + PD   + SV+ A AEL+V+ + + IHA +++S  E ++ V 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
            +L+ MYAKCG++  A   FD M  R V +W  +I GY  +G GK +++ +++M+   TK
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
           P+ ITF+  + ACSH+GL+  G  YF ++ K YGI+P  +HY  M+DLLGR+G+L EA  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
            + +M + P   V+ A+L AC++HK +ELGE AA  LFEL+P     +V+L+N+Y+AA  
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           W+  A++R +M  +G+ K PG S +E  ++V +F S    HP    IY+ ++ +I  IK 
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420

Query: 720 AGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AGYVPD + ++HD +D V+E  L+ HSEKLA+AFGLL    G+ I I KNLRVCGDCH A
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            KY S V  R II+RD + FH F  G CSCGDYW
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 144/264 (54%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++++ G  +    +DA+SF  +MR  D+    Y    +L     +  ++    +H  +I
Sbjct: 9   WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
             GF         +++MYAK G+++ A  +F +M ++D+VSW ++V G++ NG  E A+ 
Sbjct: 69  KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L  +M   G   D I + S+L A A +  +  G+ +H   +++G +S ++V  +LV MYA
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYA 188

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           KCG +  A   FD M +R+V+SW ++I  Y + G  + +++ + +M+  G +P  +T + 
Sbjct: 189 KCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIG 248

Query: 346 ALHACADLGDLERGIFVHKLLDQL 369
            L AC+  G L  G    + +D++
Sbjct: 249 LLFACSHNGLLGSGRAYFEAMDKV 272



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 10/259 (3%)

Query: 62  LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
           LIIK+G     L    L+ ++ K   L  A  VF  + DK    + +++ GY+   S ++
Sbjct: 66  LIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEE 125

Query: 122 AVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVN 181
           A+    +MR   V P       +L  C ++  +  G++IH  L+ +G    L     +V 
Sbjct: 126 AIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVT 185

Query: 182 MYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFIT 241
           MYAKCG I +A + FD MP RD++SW  ++ G+AQNG  + +L    +M   G + D+IT
Sbjct: 186 MYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYIT 245

Query: 242 IVSILPAVANVGSLRIGKAVHG-----YAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + +L A ++ G L  G+A        Y ++ G +        ++D+  + G++  A+ +
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHY----ACMIDLLGRSGKLAEAKGL 301

Query: 297 FDGM-KSRNVVSWNSMIAA 314
            + M  + + V W +++AA
Sbjct: 302 LNQMVVAPDAVVWKALLAA 320



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 5/175 (2%)

Query: 44  ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C  L  +   ++I   ++KSGL         LV+++ K  S+ DA R F+ +P 
Sbjct: 146 ASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT 205

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  ++ GYA+      ++ F  +M      P    +  LL  C   G +  G+  
Sbjct: 206 RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAY 265

Query: 161 HGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PERDLVSWNTIVAG 213
              +  V G          ++++  + G++ EA  + ++M    D V W  ++A 
Sbjct: 266 FEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/623 (36%), Positives = 366/623 (58%), Gaps = 7/623 (1%)

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           ++ F   P   L ++  I    +     E  L++V    E G    F    ++L A  + 
Sbjct: 9   HRSFSSSPNSVLQTFRPISQLCSNGRLQEALLEMVMLGPEIG----FHCYDALLNACLDK 64

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
            +LR G+ VH + ++  +     + T L+  Y KC  +E AR V D M  +NVVSW +MI
Sbjct: 65  RALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 124

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + Y + G+  EA+ +F +M+    +P   T    L +C     L  G  +H L+ +    
Sbjct: 125 SRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYD 184

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
           + + + +SL+ MY+K  +++ A +IF  L  + +VS  A+I GYAQ G   EAL  F ++
Sbjct: 185 SHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRL 244

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           +S+ ++P+  T  S++ AL+ L+++ + K  H  V+R        +  +LIDMY+KCG +
Sbjct: 245 QSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 304

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISA 551
             A+ LFD M ER   +WN M+ GY  HGLG+  +ELF  M  E   KP+ +T L  +S 
Sbjct: 305 SYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 364

Query: 552 CSHSGLVEEGIHYFTSL-KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
           CSH  + + G+  +  +   +YGI+P  +HYG +VD+LGRAGR++EA++FI++MP +P  
Sbjct: 365 CSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 424

Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
            V G++LGAC++H +V++GE   +RL E++P+  G +V+L+N+YA+A  W+ +  VR +M
Sbjct: 425 GVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMM 484

Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
            +K + K PG S ++ +  +H F++    HP+ + +   ++ +  ++K AGYVPD + + 
Sbjct: 485 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVL 544

Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
           +DV++  +E +L  HSEKLA+ FGL+ +  G  I + KNLR+C DCHN  K  S V  RE
Sbjct: 545 YDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 604

Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
           + +RD +RFH    G+CSCGDYW
Sbjct: 605 VSLRDKNRFHQIVKGICSCGDYW 627



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 176/309 (56%), Gaps = 1/309 (0%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           Y  LL  C D   +R G+ +H  +I   +    +  T ++  Y KC  +E+A K+ D MP
Sbjct: 54  YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
           E+++VSW  +++ ++Q G +  AL +   M     + +  T  ++L +      L +GK 
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +HG  ++  +DS + V ++L+DMYAK G++E AR +F+ +  R+VVS  ++IA Y + G 
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            EEA+ +FQ++  +G+ P  VT    L A + L  L+ G   H  + + +L     + NS
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293

Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKNIKP 439
           LI MYSKC  +  A  +F  +  +T +SWNAM++GY+++G   E L  F  MR  K +KP
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353

Query: 440 DSFTMVSVI 448
           D+ T+++V+
Sbjct: 354 DAVTLLAVL 362



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 6/376 (1%)

Query: 46  LLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL  C    +L+E +R+   +IK+        +T+L+  + K + L DA +V + +P+K 
Sbjct: 57  LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              +  M+  Y++     +A+S    M   D  P  + +  +L  C     +  GK+IHG
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHG 176

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++   +   +F  + +++MYAK GQIEEA ++F+ +PERD+VS   I+AG+AQ G  E 
Sbjct: 177 LIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 236

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL++  R+  EG R +++T  S+L A++ +  L  GK  H + +R        +  +L+D
Sbjct: 237 ALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 296

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG-VEPTNV 341
           MY+KCG +  A+ +FD M  R  +SWN+M+  Y + G   E + +F+ M D+  V+P  V
Sbjct: 297 MYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 356

Query: 342 TIMEALHACA--DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           T++  L  C+   + D    I+   +  +  +  D      ++ M  +  ++D A +   
Sbjct: 357 TLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIK 416

Query: 400 KLQGKTLVSWNAMILG 415
           ++  K        +LG
Sbjct: 417 RMPSKPTAGVLGSLLG 432


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/557 (38%), Positives = 339/557 (60%), Gaps = 5/557 (0%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R G      +   L+   +KC  ++ A  +F    + NV  + ++I  +V  GN
Sbjct: 58  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             EA++++ +ML + + P N  +   L AC     L  G  VH    +L   ++  +   
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177

Query: 381 LISMYSKCKKVDRAADIFSKLQ----GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           ++ +Y KC ++  A  +F ++      K  V W AMI G+ +N   N AL  F  M+ +N
Sbjct: 178 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN 237

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P+ FT+V V+ A ++L  +   +W+H+ + +   E N+FV  ALI+MY++CG++  A+
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 297

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +FD M +R V T+N MI G   +G  + A+ELF  M+    +P ++TF+  ++ACSH G
Sbjct: 298 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGG 357

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           LV+ G   F S+ +DY +EP ++HYG MVDLLGR GRL EA+D I+ M + P   + G +
Sbjct: 358 LVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTL 417

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L ACK+HKN+ELGE+ A  L +    + G +VLL+++YA++  W + A+VR  M++ G+Q
Sbjct: 418 LSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 477

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PGCS +E+ NE+H F  G  +HPQ +RIY  LE L   ++  GY P+   +  D+ED 
Sbjct: 478 KEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDG 537

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E  L+ HSE+LAI +GL+++ P + I + KNLRVC DCH+A K I+ +T R+I+VRD 
Sbjct: 538 EKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDR 597

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH F+NG CSCGDYW
Sbjct: 598 NRFHYFENGACSCGDYW 614



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 191/357 (53%), Gaps = 8/357 (2%)

Query: 54  KELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           + + ++LP+   +I++G         +L+    K +++  A+R+F+   +    LY  ++
Sbjct: 50  RHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 109

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+    +  +A+    RM ++ + P  Y    +LK CG    +R G+E+H + +  GFS
Sbjct: 110 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 169

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE----RDLVSWNTIVAGFAQNGFAELALDL 226
            +      ++ +Y KCG++ +A ++F+ MPE    +D V W  ++ GF +N     AL+ 
Sbjct: 170 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEA 229

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M  E  R +  TIV +L A + +G+L IG+ VH Y  +   +  + V  AL++MY++
Sbjct: 230 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 289

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG ++ A+ VFD MK R+V+++N+MI+     G   +A+ +F+ M+ + + PTNVT +  
Sbjct: 290 CGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGV 349

Query: 347 LHACADLGDLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           L+AC+  G ++ G  + H +    ++   +     ++ +  +  +++ A D+   ++
Sbjct: 350 LNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 406


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/727 (31%), Positives = 396/727 (54%), Gaps = 9/727 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCK 84
           +++R   P R      A+LL+ C++L+EL    ++  L +K+GL       + LV ++ K
Sbjct: 140 MARRGVSPDRT---TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGK 196

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
             SL DA   F  +P++    +   + G  +       +   I M+   +     +Y   
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 256

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
            + C  +  +  G+++H   I N FS D    T +V++YAK   + +A + F  +P   +
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            + N ++ G  + G    A+ L   M     R D +++  +  A A       G+ VH  
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+++GFD  + V+ A++D+Y KC  +  A L+F GMK ++ VSWN++IAA  + G+ ++ 
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +  F +ML  G++P + T    L ACA L  LE G+ VH  + +  LG+D  + ++++ M
Sbjct: 437 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  +D A  +  ++ G+ +VSWNA++ G++ N    EA  +F +M    +KPD FT 
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            +V+   A L+ I   K IH  +I+     + ++ + L+DMYAKCG +  +  +F+ + +
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R   +WN MI GY  HGLG  A+ +F +M +    PN  TF+  + ACSH GL ++G  Y
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +   Y +EP ++H+  MVD+LGR+    EA  FI  MP +    ++  +L  CKI +
Sbjct: 677 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 736

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           +VE+ E AA+ +  LDPD+   ++LL+N+YA +  W  +++ R ++++  L+K PGCS +
Sbjct: 737 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
           E+++E+H F  G   HP+S  +Y  L  LI E+K +GY PD+ S  +V+   +E     H
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVD---EEGSAPEH 853

Query: 745 SEKLAIA 751
             +L +A
Sbjct: 854 CLELLVA 860



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 10/563 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +     +S A  +F+ +PD     ++ ++ GY +     ++V   + M    V+P 
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  LLK C  + E+  G ++H   +  G  +D+   + +V+MY KC  +++A   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPER+ VSW   +AG  QN      L+L   M   G      +  S   + A +  L  
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H +A++  F S   V TA+VD+YAK   +  AR  F G+ +  V + N+M+   V 
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EAM +FQ M+   +    V++     ACA+     +G  VH L  +     D+ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+++ +Y KCK +  A  IF  ++ K  VSWNA+I    QNG  ++ + +F +M    +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KPD FT  SV+ A A L  + Y   +H  VI+S    + FV + ++DMY KCG +  A+ 
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           L D +  + V +WN ++ G+  +   + A + F++ML+   KP+  TF   +  C++   
Sbjct: 509 LHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 568

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +E G      + K    E + D Y    +VD+  + G + ++    +K+     ++ + A
Sbjct: 569 IELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 624

Query: 616 MLGACKIHKNVELGEKAANRLFE 638
           M+    +H    LG +A  R+FE
Sbjct: 625 MICGYALHG---LGVEAL-RMFE 643



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 231/484 (47%), Gaps = 10/484 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D  +   ++  Y+  G I  A  +FD MP+ D+VSWN +V+G+ Q G  + ++DL   M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G   D  T   +L + + +  L +G  VH  A++ G +  V   +ALVDMY KC  ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A   F GM  RN VSW + IA  V+       + +F +M   G+  +  +   A  +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            +  L  G  +H    + K  +D  +  +++ +Y+K   +  A   F  L   T+ + NA
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M++G  + G   EA+  F  M   +I+ D  ++  V  A AE       + +H L I+S 
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ ++ V  A++D+Y KC A+  A  +F  M ++   +WN +I     +G     +  FN
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +ML    KP+D T+   + AC+    +E G+     + K  G+         +VD+  + 
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKC 500

Query: 592 GRLNEAWDFIQKMPIEPG---ITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGY 646
           G ++EA    QK+    G   +  + A+L    ++K  E  +K  + + +  L PD   +
Sbjct: 501 GIIDEA----QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 647 HVLL 650
             +L
Sbjct: 557 ATVL 560



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 225/533 (42%), Gaps = 83/533 (15%)

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +GF     VS  L+ MYA+C     AR VFD M  R+ VSWN+M+ AY   G+   A+ +
Sbjct: 46  SGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 328 FQKMLD-------------------------------QGVEPTNVTIMEALHACADLGDL 356
           F  M D                               +GV P   T    L +C+ L +L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G+ VH L  +  L  DV   ++L+ MY KC+ +D A   F  +  +  VSW A I G 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QN +    L  F +M+   +     +  S   + A +S +   + +HA  I++ F  + 
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V TA++D+YAK  ++  AR  F  +    V T N M+ G    GLG  A+ LF  M+  
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345

Query: 537 PTKPNDITFLCAISACSHS-GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
             + + ++     SAC+ + G  +    +  ++K  + ++  +++  A++DL G+   L 
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALM 403

Query: 596 EAWDFIQKMP----------------------------------IEPGITVFGAMLGACK 621
           EA+   Q M                                   ++P    +G++L AC 
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
             +++E G    +++ +          L ++ + A+++ D   K   I E + L    G 
Sbjct: 464 ALRSLEYGLMVHDKVIK--------SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVED 734
             V   N + S +S + +  ++++ ++       E+   G  PD  +   V D
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFS-------EMLDMGLKPDHFTFATVLD 561



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 33/185 (17%)

Query: 467 VIRSCFEKNVFVMTALIDM-------------------------------YAKCGAVGTA 495
           ++ S F  N FV   L+ M                               Y+  G + TA
Sbjct: 43  MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
            ALFD M +  V +WN ++ GY   G+ + +V+LF +M      P+  TF   + +CS  
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
             +  G+    +L    G+E  +    A+VD+ G+   L++A  F   MP E     +GA
Sbjct: 163 EELSLGVQVH-ALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGA 220

Query: 616 MLGAC 620
            +  C
Sbjct: 221 AIAGC 225


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/514 (42%), Positives = 325/514 (63%), Gaps = 2/514 (0%)

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M +R++ SW S+IA Y +   P+EA+ +   ML    +P   T    L A         G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H L  +     DV + ++L+ MY++C ++D A  +F +L+ K  VSWNA+I G+A+ 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
           G     L  F +M+    +   FT  SV  A+A +  +   KW+HA +I+S    + FV 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
             ++DMYAK G++  AR +FD ++++ + TWN M+  +  +GLG+ AV  F +M +    
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
            N ITFL  ++ACSH GLV+EG  YF  + K++ +EP +DHY  +VDLLGRAG LN+A  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYF-DMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
           FI KMP++P   V+GA+LG+C++HKN ++G+ AA+ +FELDPD+ G  VLL NIYA+   
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359

Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
           WD  A+VR +M+  G++K P CS VE++N VH F +    HP+S+ IY   E +  +I+ 
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419

Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
           AGYVP+T+ +   V++  ++  L  HSEK+A+AF L+N   G+TI I KN+R+CGDCH+A
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479

Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            +YIS V  REI+VRD +RFH F +G CSCGDYW
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 168/319 (52%), Gaps = 5/319 (1%)

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M  RD+ SW +++AG+AQN   + AL L+  M     + +  T  S+L A     S  IG
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
           + +H   ++  +   V V +AL+DMYA+CGR++ A  VFD ++S+N VSWN++IA +   
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS-- 376
           G+ E  + +F +M   G E T+ T      A A +G LE+G +VH  +  +K G  +S  
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAF 178

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N+++ MY+K   +  A  +F  +  K LV+WN+M+  +AQ G   EA+ +F +MR   
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           +  +  T +S++ A +   +++  K    ++     E  +     ++D+  + G +  A 
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDAL 298

Query: 497 A-LFDMMNERHVTTWNVMI 514
             +F M  +     W  ++
Sbjct: 299 VFIFKMPMKPTAAVWGALL 317



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 161/309 (52%), Gaps = 1/309 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           + +++ GYA+    D+A+  L+ M      P  + +  LLK  G       G++IH   +
Sbjct: 9   WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
              +  D++  + +++MYA+CG+++ A  +FD++  ++ VSWN ++AGFA+ G  E  L 
Sbjct: 69  KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           +   M   G      T  S+  A+A +G+L  GK VH + +++G      V   ++DMYA
Sbjct: 129 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 188

Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
           K G +  AR VFD +  +++V+WNSM+ A+ + G   EA+  F++M   GV    +T + 
Sbjct: 189 KSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 248

Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK- 404
            L AC+  G ++ G     ++ +  L  ++    +++ +  +   ++ A     K+  K 
Sbjct: 249 ILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 308

Query: 405 TLVSWNAMI 413
           T   W A++
Sbjct: 309 TAAVWGALL 317



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
            +I  L +K    D     + L+ ++ +   +  A  VF+ +  K    ++ ++ G+A+ 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              +  +     M+ +      + Y+ +      +G + +GK +H  +I +G  L  F  
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++MYAK G + +A K+FD + ++DLV+WN+++  FAQ G    A+     M + G  
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
            + IT +SIL A ++ G ++ GK           +  ++    +VD+  + G +  A LV
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDA-LV 299

Query: 297 F 297
           F
Sbjct: 300 F 300


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/727 (31%), Positives = 396/727 (54%), Gaps = 9/727 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCK 84
           +++R   P R      A+LL+ C++L+EL    ++  L +K+GL       + LV ++ K
Sbjct: 140 MARRGVSPDRT---TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGK 196

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
             SL DA   F  +P++    +   + G  +       +   I M+   +     +Y   
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 256

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
            + C  +  +  G+++H   I N FS D    T +V++YAK   + +A + F  +P   +
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            + N ++ G  + G    A+ L   M     R D +++  +  A A       G+ VH  
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+++GFD  + V+ A++D+Y KC  +  A L+F GMK ++ VSWN++IAA  + G+ ++ 
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +  F +ML  G++P + T    L ACA L  LE G+ VH  + +  LG+D  + ++++ M
Sbjct: 437 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  +D A  +  ++ G+ +VSWNA++ G++ N    EA  +F +M    +KPD FT 
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            +V+   A L+ I   K IH  +I+     + ++ + L+DMYAKCG +  +  +F+ + +
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R   +WN MI GY  HGLG  A+ +F +M +    PN  TF+  + ACSH GL ++G  Y
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +   Y +EP ++H+  MVD+LGR+    EA  FI  MP +    ++  +L  CKI +
Sbjct: 677 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 736

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           +VE+ E AA+ +  LDPD+   ++LL+N+YA +  W  +++ R ++++  L+K PGCS +
Sbjct: 737 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
           E+++E+H F  G   HP+S  +Y  L  LI E+K +GY PD+ S  +V+   +E     H
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVD---EEGSAPEH 853

Query: 745 SEKLAIA 751
             +L +A
Sbjct: 854 CLELLVA 860



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 10/563 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +     +S A  +F+ +PD     ++ ++ GY +     ++V   + M    V+P 
Sbjct: 89  MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  LLK C  + E+  G ++H   +  G  +D+   + +V+MY KC  +++A   F 
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPER+ VSW   +AG  QN      L+L   M   G      +  S   + A +  L  
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H +A++  F S   V TA+VD+YAK   +  AR  F G+ +  V + N+M+   V 
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EAM +FQ M+   +    V++     ACA+     +G  VH L  +     D+ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+++ +Y KCK +  A  IF  ++ K  VSWNA+I    QNG  ++ + +F +M    +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KPD FT  SV+ A A L  + Y   +H  VI+S    + FV + ++DMY KCG +  A+ 
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           L D +  + V +WN ++ G+  +   + A + F++ML+   KP+  TF   +  C++   
Sbjct: 509 LHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 568

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +E G      + K    E + D Y    +VD+  + G + ++    +K+     ++ + A
Sbjct: 569 IELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 624

Query: 616 MLGACKIHKNVELGEKAANRLFE 638
           M+    +H    LG +A  R+FE
Sbjct: 625 MICGYALHG---LGVEAL-RMFE 643



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 231/484 (47%), Gaps = 10/484 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D  +   ++  Y+  G I  A  +FD MP+ D+VSWN +V+G+ Q G  + ++DL   M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G   D  T   +L + + +  L +G  VH  A++ G +  V   +ALVDMY KC  ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A   F GM  RN VSW + IA  V+       + +F +M   G+  +  +   A  +CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            +  L  G  +H    + K  +D  +  +++ +Y+K   +  A   F  L   T+ + NA
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M++G  + G   EA+  F  M   +I+ D  ++  V  A AE       + +H L I+S 
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ ++ V  A++D+Y KC A+  A  +F  M ++   +WN +I     +G     +  FN
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +ML    KP+D T+   + AC+    +E G+     + K  G+         +VD+  + 
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKC 500

Query: 592 GRLNEAWDFIQKMPIEPG---ITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGY 646
           G ++EA    QK+    G   +  + A+L    ++K  E  +K  + + +  L PD   +
Sbjct: 501 GIIDEA----QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 647 HVLL 650
             +L
Sbjct: 557 ATVL 560



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 225/533 (42%), Gaps = 83/533 (15%)

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +GF     VS  L+ MYA+C     AR VFD M  R+ VSWN+M+ AY   G+   A+ +
Sbjct: 46  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 328 FQKMLD-------------------------------QGVEPTNVTIMEALHACADLGDL 356
           F  M D                               +GV P   T    L +C+ L +L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G+ VH L  +  L  DV   ++L+ MY KC+ +D A   F  +  +  VSW A I G 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QN +    L  F +M+   +     +  S   + A +S +   + +HA  I++ F  + 
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V TA++D+YAK  ++  AR  F  +    V T N M+ G    GLG  A+ LF  M+  
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345

Query: 537 PTKPNDITFLCAISACSHS-GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
             + + ++     SAC+ + G  +    +  ++K  + ++  +++  A++DL G+   L 
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALM 403

Query: 596 EAWDFIQKMP----------------------------------IEPGITVFGAMLGACK 621
           EA+   Q M                                   ++P    +G++L AC 
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
             +++E G    +++ +          L ++ + A+++ D   K   I E + L    G 
Sbjct: 464 ALRSLEYGLMVHDKVIK--------SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVED 734
             V   N + S +S + +  ++++ ++       E+   G  PD  +   V D
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFS-------EMLDMGLKPDHFTFATVLD 561


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/683 (33%), Positives = 392/683 (57%), Gaps = 4/683 (0%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L++ C +LK  + I  L   +   G+       + L+  + +Y  +  A ++F+ +  K 
Sbjct: 140 LVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKD 199

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
             +++ ML GYAK  + D  +     MR D ++P    +  +L VC     I  G ++HG
Sbjct: 200 CVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 259

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++V+G   +      +++MY+KCG+ ++A K+F  M   D V+WN +++G+ Q+G  E 
Sbjct: 260 LVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEE 319

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +L     M   G   D IT  S+LP+V+   +L   + +H Y MR      + +++AL+D
Sbjct: 320 SLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALID 379

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y KC  V  A+ +F    S +VV + +MI+ Y+  G   +A+ +F+ ++   + P  +T
Sbjct: 380 AYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEIT 439

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           ++  L     L  L+ G  +H  + +       ++  ++I MY+KC +++ A +IF +L 
Sbjct: 440 LVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS 499

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
            + +VSWN+MI   AQ+   + A++ F +M    I  D  ++ + + A A L    + K 
Sbjct: 500 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKA 559

Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
           IH  +I+     +V+  + LIDMYAKCG +  A  +FD M E+++ +WN +I  YG HG 
Sbjct: 560 IHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGK 619

Query: 523 GKAAVELFNKMLE-GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
            K ++ LF++M+E    +P+ ITFL  IS C H G V+EG+ +F S+ +DYGI+P  +HY
Sbjct: 620 LKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHY 679

Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
             +VDL GRAGRL+EA++ ++ MP  P   V+G +LGA ++HKNVEL + A++RL +LDP
Sbjct: 680 ACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDP 739

Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
              GY+VL++N +A    W+ + KVR++M+++ +QK PG S +E+    H F SG   HP
Sbjct: 740 WNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHP 799

Query: 702 QSKRIYTFLETLIDEIKAAGYVP 724
           +S  IY+ L +L++E++  GY+P
Sbjct: 800 ESSHIYSLLNSLLEELRLEGYIP 822



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 161/658 (24%), Positives = 325/658 (49%), Gaps = 29/658 (4%)

Query: 34  IPSRIYRHPSALLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           +P R+     +LLL+ C++L  LR+   +   +I + +        +++ ++    S S+
Sbjct: 30  LPRRL-----SLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSN 84

Query: 91  AARVFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
             ++F  +  +L ++  +++++  + +   L+ A++F  +M    V+P V  +  L+K C
Sbjct: 85  CGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 144

Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
             +   +  + +   +   G   + F  + ++  Y + G+I+ A K+FDR+ ++D V WN
Sbjct: 145 VALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWN 204

Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
            ++ G+A+ G ++  +   + M  +    + +T   +L   A+   + +G  +HG  + +
Sbjct: 205 VMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 264

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           G D   ++  +L+ MY+KCGR + A  +F  M   + V+WN MI+ YV+ G  EE++  F
Sbjct: 265 GLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFF 324

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
            +M+  GV P  +T    L + +   +LE    +H  + +  +  D+ +T++LI  Y KC
Sbjct: 325 YEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKC 384

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
           + V  A  IFS+     +V + AMI GY  NG   +AL  F  +    I P+  T+VS++
Sbjct: 385 RGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSIL 444

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
           P +  L  ++  + +H  +I+  F+    +  A+IDMYAKCG +  A  +F  +++R + 
Sbjct: 445 PVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIV 504

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFT 566
           +WN MI          AA+++F +M       + ++   A+SAC++  S    + IH F 
Sbjct: 505 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFM 564

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
            +K    ++   +    ++D+  + G L  A +    M  E  I  + +++ A   H  +
Sbjct: 565 -IKHSLALDVYSE--STLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAAYGNHGKL 620

Query: 627 --------ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
                   E+ EK+ NR     PD+  +  +++       + + +   R++ +  G+Q
Sbjct: 621 KDSLCLFHEMVEKSGNR-----PDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQ 673


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/685 (32%), Positives = 388/685 (56%), Gaps = 7/685 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C+SL+ L   R+I   ++        + Q  ++S++ K  SL +A  +F+ +P K 
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ GY+++   D+A++  ++M      P  + +  ++K C  + + +  +++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ + F  DL A   +++MY K  Q+ +A  +F R+  +DL+SW +++AGF+Q G+   
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 223 ALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           AL     M  +   +  +F+   S   A + +     G+ +HG  ++ G  S +    +L
Sbjct: 284 ALCHFREMLSQSVYQPNEFV-FGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSL 342

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            DMYAKCG +E+AR VF  ++  ++V+WN++IA +    N +E+   F +M   G+ P +
Sbjct: 343 CDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VT++  L AC++   L  GI VH  + ++    D+ + NSL+SMYSKC  ++ A  +F  
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462

Query: 401 LQGKT-LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           +  K  +VSWN ++    Q  +  E L     M +  IKPD  T+ +V+ +  +++    
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IH  +++S    ++ V  ALI+MY KCG++  AR +FD +    + +W+ +I GY  
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            G GK A ELF  M     KPN+ITF+  ++ACSH G+VEEG+  + ++++DY I P  +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           H   MVDLL RAG L+ A DFI++MP  P + V+  +L ACK+H N+E+G++AA  + ++
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKI 702

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP      V+L NI+A++  W   A++R+ M +  + K PG S +E+K++VH F +    
Sbjct: 703 DPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNL 762

Query: 700 HPQSKRIYTFLETLIDEIKAAGYVP 724
           HP+  +IYT LE L+ +I   G  P
Sbjct: 763 HPERGKIYTMLEELMLQILDDGCDP 787



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 239/464 (51%), Gaps = 13/464 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT+L+  C  +  +  G++IH  ++   +  D+     +++MY KCG ++EA  MFD MP
Sbjct: 101 YTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMP 160

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +++VSW ++++G+++ G  + A+ L  +M   G   D  T  SI+ + + +   ++ + 
Sbjct: 161 LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQ 220

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H + +++ F + +    AL+ MY K  ++  A  VF  +  ++++SW SMIA + + G 
Sbjct: 221 LHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGY 280

Query: 321 PEEAMRIFQKMLDQGV-EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EA+  F++ML Q V +P       A  AC+ L + + G  +H L  +  LG+D+    
Sbjct: 281 ELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGC 340

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL  MY+KC  ++ A  +F  ++   LV+WNA+I G+A      E+ ++F +MR   + P
Sbjct: 341 SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVP 400

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T++S++ A +E  ++ +   +H+ +++  F  ++ V  +L+ MY+KC  +  A  +F
Sbjct: 401 NDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVF 460

Query: 500 -DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
            D+ N+  + +WN ++            + L   M     KP+ +T    + +       
Sbjct: 461 EDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASY 520

Query: 559 EEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           E G  IH F   + L  D  +        A++++  + G L  A
Sbjct: 521 EVGSQIHCFIMKSGLNLDISVS------NALINMYTKCGSLECA 558



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 230/445 (51%), Gaps = 15/445 (3%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T   ++ A +++ SL  G+ +H + +   +   + +   ++ MY KCG ++ AR +FD 
Sbjct: 99  VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  +NVVSW SMI+ Y   G  + A+ ++ +ML  G  P + T    + +C+ L D +  
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  + + + G D+   N+LISMY+K  ++  A ++FS++  K L+SW +MI G++Q 
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278

Query: 420 GRVNEALNYFCKMRSKNI-KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           G   EAL +F +M S+++ +P+ F   S   A ++L      + IH L I+     ++F 
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             +L DMYAKCG + +AR +F  + +  +  WN +I G+ +    K +   F++M     
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            PND+T L  + ACS   ++  GI   + + K  G    +    +++ +  +   LN+A 
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNLNDAL 457

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGE--KAANRLF--ELDPDEGGYHVLLANIY 654
              + +  +  I  +  +L AC + +N + GE  +    +F   + PD    HV L N+ 
Sbjct: 458 QVFEDIGNKADIVSWNTLLTAC-LQQN-QAGEVLRLTKLMFASRIKPD----HVTLTNVL 511

Query: 655 AAA---SMWDKLAKVRTIMEKKGLQ 676
            ++   + ++  +++   + K GL 
Sbjct: 512 VSSGQIASYEVGSQIHCFIMKSGLN 536



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A  IFQK     ++  +VT    ++AC+ L  LE G  +H+ +       D+ + N ++
Sbjct: 83  KAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           SMY KC  +  A ++F  +  K +VSW +MI GY++ G  + A+  + +M      PD F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T  S++ + + L   + A+ +HA V++S F  ++    ALI MY K   +  A  +F  +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACS 553
             + + +W  MI G+   G    A+  F +ML +   +PN+  F  A SACS
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACS 312


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/644 (34%), Positives = 377/644 (58%), Gaps = 7/644 (1%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           + F    +V  Y +C  I++A   F  + E++  S+  ++  + +N   + AL L  +  
Sbjct: 16  ETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSI 75

Query: 232 EEGRRGDFITIVSILPAVANVGS--LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
            E  + +  T V++L + A++G   L  GK +H +A+  GF + + V  +L+ MYAKCG 
Sbjct: 76  NEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGS 135

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
            + A  VF+ M+ +N++S+ SMI AY       EA  +++KML +G+ P       AL  
Sbjct: 136 FKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV 195

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C  +     G  +H  L   +  T V  +N+L+ MY +  ++  A  +F  ++ K L S+
Sbjct: 196 CPTI---REGEAIHVKLGNHERRTPVC-SNALVGMYGRFGRIASAKWVFDGIRYKDLASY 251

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
           N MI  +A+    ++A++ + +M  +N++P+ +T  SV+ A ++L  +   K IH  V  
Sbjct: 252 NNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKG 311

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                +V   TAL++MYAKCG+   ARA+F+    ++V TW  ++  Y   G  +  +E 
Sbjct: 312 GDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEA 371

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           + +M      P+D+TF    +ACSHSGL +EG+ YF ++++D+ I P+  HY  M+DLLG
Sbjct: 372 YQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLG 431

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           R GRL EA + ++ MP  P +  +  +L ACK++ ++++G +A  R+ EL+P + G ++L
Sbjct: 432 RVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLL 491

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           + N+YA A  W  +A+V+ +++++GL K PG S++E +  +H F  G T HP ++ I   
Sbjct: 492 MGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRAR 551

Query: 710 LETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           L+ + +++  AGY PDT  +  DV + V+  LL  HSE++A+  GLL S  G+T+HI KN
Sbjct: 552 LQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKN 611

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LR+C DCH+  K +S +  R+++VRD HRFH F+ G CSCGDYW
Sbjct: 612 LRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 219/471 (46%), Gaps = 26/471 (5%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LV  + +  S+ DA   F  I +K +  Y  M+  Y +      A+    +   +++   
Sbjct: 23  LVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQN 82

Query: 138 VYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
              Y  +LK C  +GE  +  GKEIH   I  GF  DL     +++MYAKCG  + A  +
Sbjct: 83  QATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGV 142

Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
           F++M  ++L+S+ +++  +        A +L  +M  EG   D   I +   A+A   ++
Sbjct: 143 FEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPD---IYAYAAALAVCPTI 199

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           R G+A+H         + V  S ALV MY + GR+ +A+ VFDG++ +++ S+N+MIA +
Sbjct: 200 REGEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVF 258

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            +  +  +A+ ++ +M  + +EP   T    L AC+ LG L  G  +HK +      TDV
Sbjct: 259 AKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDV 318

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
           +   +L++MY+KC     A  +F+    K + +W +++  Y+Q G+    L  + +M  +
Sbjct: 319 AYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCE 378

Query: 436 NIKPDSFTMVSVIPA----------LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
            + PD  T  ++  A          L     +R   WI  L             T +ID+
Sbjct: 379 GVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPH---------YTCMIDL 429

Query: 486 YAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
             + G +  A  L   M     V TW +++     +G  K     + ++ E
Sbjct: 430 LGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITE 480



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 4/316 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L++ + I    I  G     + Q  L+ ++ K  S   AA VFE +  K    Y +M++ 
Sbjct: 101 LEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQA 160

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLD 172
           Y   A   +A     +M  + + P +Y Y   L VC     IR G+ IH +L  N     
Sbjct: 161 YTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPT---IREGEAIHVKL-GNHERRT 216

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
                 +V MY + G+I  A  +FD +  +DL S+N ++A FA+      A+ L   M  
Sbjct: 217 PVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEG 276

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
                +  T  S+L A + +G+L  GK +H         + V  +TALV+MYAKCG    
Sbjct: 277 RNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHE 336

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR VF+    +NV +W S+++AY + G  +  +  +Q+M  +GV P +VT     +AC+ 
Sbjct: 337 ARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSH 396

Query: 353 LGDLERGIFVHKLLDQ 368
            G  + G+   + + +
Sbjct: 397 SGLPDEGLLYFRAMRE 412



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 155/302 (51%), Gaps = 13/302 (4%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQH--LFQTKLVSLFCKYNSLSDAARVF 95
           IY + +AL   VC +++E   I    +K G  ++   +    LV ++ ++  ++ A  VF
Sbjct: 186 IYAYAAAL--AVCPTIREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVF 240

Query: 96  EPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIR 155
           + I  K  A Y+ M+  +AK+     A+S  I M   ++ P ++ +T +L  C  +G + 
Sbjct: 241 DGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALT 300

Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
            GKEIH ++       D+   T +VNMYAKCG   EA  +F+    +++ +W ++++ ++
Sbjct: 301 EGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYS 360

Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
           Q G ++  L+   RM+ EG   D +T  +I  A ++ G    G  ++  AMR     IV 
Sbjct: 361 QPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEG-LLYFRAMREDH-WIVP 418

Query: 276 VS---TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
           +    T ++D+  + GR+  A  +   M  S +VV+W  +++A    G+ +   R ++++
Sbjct: 419 LQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRI 478

Query: 332 LD 333
            +
Sbjct: 479 TE 480



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 27/222 (12%)

Query: 473 EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
           EK  F+   L+  Y +C ++  A A F  + E++  ++ +M+  Y  + L K A++LF K
Sbjct: 14  EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73

Query: 533 MLEGPTKPNDITFLCAISACSHSG--LVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLL 588
            +    + N  T++  + +C+H G   +E+G  IH   ++ + +G + V+ +  +++ + 
Sbjct: 74  SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRH-AIAQGFGTDLVVQN--SLIHMY 130

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
            + G    A    +KM  +  I+    +       K+VE     A  L++    EG    
Sbjct: 131 AKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVE-----AYELYKKMLSEG---- 181

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGL--------QKTPGCS 682
           ++ +IYA A+    LA   TI E + +        ++TP CS
Sbjct: 182 IMPDIYAYAA---ALAVCPTIREGEAIHVKLGNHERRTPVCS 220


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/570 (38%), Positives = 338/570 (59%), Gaps = 2/570 (0%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           +L   A   S   G+A H   +R G +  +  S  L++MY+KC  V++AR  F+ M  ++
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
           +VSWN++I A  +     EA+++  +M  +G      TI   L  CA    +   + +H 
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
              +  + ++  +  +L+ +Y+KC  +  A+ +F  +  K  V+W++M+ GY QNG   E
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           AL  F   +      D F + S + A A L+ +   K +HA+  +S F  N++V ++LID
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 485 MYAKCGAVGTARALFD-MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           MYAKCG +  A  +F  ++  R +  WN MI G+  H     A+ LF KM +    P+D+
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           T++C ++ACSH GL EEG  YF  + + + + P + HY  M+D+LGRAG +++A+D I++
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP     +++G++L +CKI+ N+E  E AA  LFE++P+  G H+LLANIYAA   WD++
Sbjct: 409 MPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEV 468

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+ R ++ +  ++K  G S +E+KN++HSF  G   HPQ   IY  L+ L+ E+K   Y 
Sbjct: 469 ARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYK 528

Query: 724 PDT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
            DT N +HDVE+  ++ LL  HSEKLAI FGL+       I I KNLR+CGDCH   K +
Sbjct: 529 VDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLV 588

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S  T REIIVRD +RFH FK+G CSCG++W
Sbjct: 589 SKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 197/367 (53%), Gaps = 2/367 (0%)

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
           V N  YLL++C        G+  H Q+I  G  +D+     ++NMY+KC  ++ A K F+
Sbjct: 43  VSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFN 102

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP + LVSWNT++    QN     AL L+ +M  EG   +  TI S+L   A   ++  
Sbjct: 103 EMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILE 162

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
              +H ++++A  DS   V TAL+ +YAKC  ++ A  +F+ M  +N V+W+SM+A YV+
Sbjct: 163 CMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ 222

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G  EEA+ IF+     G +     I  A+ ACA L  L  G  VH +  +   G+++ +
Sbjct: 223 NGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYV 282

Query: 378 TNSLISMYSKCKKVDRAADIFSK-LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           ++SLI MY+KC  +  A  +F   L+ +++V WNAMI G+A++ R  EA+  F KM+ + 
Sbjct: 283 SSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRG 342

Query: 437 IKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             PD  T V V+ A + + +     K+   +V +     +V   + +ID+  + G V  A
Sbjct: 343 FFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKA 402

Query: 496 RALFDMM 502
             L + M
Sbjct: 403 YDLIERM 409



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 195/374 (52%), Gaps = 6/374 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL++C   +     R     II+ GL    L    L++++ K + +  A + F  +P K 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++    + A   +A+  LI+M+ +      +  + +L  C     I    ++H 
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             I      + F  T ++++YAKC  I++A +MF+ MPE++ V+W++++AG+ QNGF E 
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL +       G   D   I S + A A + +L  GK VH  + ++GF S + VS++L+D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 283 MYAKCGRVETARLVFDG-MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           MYAKCG +  A LVF G ++ R++V WN+MI+ +       EAM +F+KM  +G  P +V
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           T +  L+AC+ +G  E G  +   ++ Q  L   V   + +I +  +   V +A D+  +
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 401 LQGKTLVS-WNAMI 413
           +      S W +++
Sbjct: 409 MPFNATSSMWGSLL 422


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/727 (31%), Positives = 396/727 (54%), Gaps = 9/727 (1%)

Query: 28  LSQRAYIPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCK 84
           +++R   P R      A+LL+ C++L+EL    ++  L +K+GL       + LV ++ K
Sbjct: 182 MARRGVSPDRT---TFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGK 238

Query: 85  YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
             SL DA   F  +P++    +   + G  +       +   I M+   +     +Y   
Sbjct: 239 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 298

Query: 145 LKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDL 204
            + C  +  +  G+++H   I N FS D    T +V++YAK   + +A + F  +P   +
Sbjct: 299 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 358

Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
            + N ++ G  + G    A+ L   M     R D +++  +  A A       G+ VH  
Sbjct: 359 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 418

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
           A+++GFD  + V+ A++D+Y KC  +  A L+F GMK ++ VSWN++IAA  + G+ ++ 
Sbjct: 419 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 478

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
           +  F +ML  G++P + T    L ACA L  LE G+ VH  + +  LG+D  + ++++ M
Sbjct: 479 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 538

Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
           Y KC  +D A  +  ++ G+ +VSWNA++ G++ N    EA  +F +M    +KPD FT 
Sbjct: 539 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 598

Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
            +V+   A L+ I   K IH  +I+     + ++ + L+DMYAKCG +  +  +F+ + +
Sbjct: 599 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 658

Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
           R   +WN MI GY  HGLG  A+ +F +M +    PN  TF+  + ACSH GL ++G  Y
Sbjct: 659 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 718

Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
           F  +   Y +EP ++H+  MVD+LGR+    EA  FI  MP +    ++  +L  CKI +
Sbjct: 719 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 778

Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
           +VE+ E AA+ +  LDPD+   ++LL+N+YA +  W  +++ R ++++  L+K PGCS +
Sbjct: 779 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 838

Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
           E+++E+H F  G   HP+S  +Y  L  LI E+K +GY PD+ S  +V+   +E     H
Sbjct: 839 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEVD---EEGSAPEH 895

Query: 745 SEKLAIA 751
             +L +A
Sbjct: 896 CLELLVA 902



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 10/563 (1%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +++ +     +S A  +F+ +PD     ++ ++ GY +     ++V   + M    V+P 
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
              +  LLK C  + E+  G ++H   +  G  +D+   + +V+MY KC  +++A   F 
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MPER+ VSW   +AG  QN      L+L   M   G      +  S   + A +  L  
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H +A++  F S   V TA+VD+YAK   +  AR  F G+ +  V + N+M+   V 
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EAM +FQ M+   +    V++     ACA+     +G  VH L  +     D+ +
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            N+++ +Y KCK +  A  IF  ++ K  VSWNA+I    QNG  ++ + +F +M    +
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           KPD FT  SV+ A A L  + Y   +H  VI+S    + FV + ++DMY KCG +  A+ 
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 550

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           L D +  + V +WN ++ G+  +   + A + F++ML+   KP+  TF   +  C++   
Sbjct: 551 LHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 610

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHY--GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           +E G      + K    E + D Y    +VD+  + G + ++    +K+     ++ + A
Sbjct: 611 IELGKQIHGQIIKQ---EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 666

Query: 616 MLGACKIHKNVELGEKAANRLFE 638
           M+    +H    LG +A  R+FE
Sbjct: 667 MICGYALHG---LGVEAL-RMFE 685



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 231/484 (47%), Gaps = 10/484 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D  +   ++  Y+  G I  A  +FD MP+ D+VSWN +V+G+ Q G  + ++DL   M 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
             G   D  T   +L + + +  L +G  VH  A++ G +  V   +ALVDMY KC  ++
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            A   F GM  RN VSW + IA  V+       + +F +M   G+  +  +   A  +CA
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
            +  L  G  +H    + K  +D  +  +++ +Y+K   +  A   F  L   T+ + NA
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           M++G  + G   EA+  F  M   +I+ D  ++  V  A AE       + +H L I+S 
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ ++ V  A++D+Y KC A+  A  +F  M ++   +WN +I     +G     +  FN
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +ML    KP+D T+   + AC+    +E G+     + K  G+         +VD+  + 
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKC 542

Query: 592 GRLNEAWDFIQKMPIEPG---ITVFGAMLGACKIHKNVELGEKAANRLFE--LDPDEGGY 646
           G ++EA    QK+    G   +  + A+L    ++K  E  +K  + + +  L PD   +
Sbjct: 543 GIIDEA----QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 598

Query: 647 HVLL 650
             +L
Sbjct: 599 ATVL 602



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 225/533 (42%), Gaps = 83/533 (15%)

Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
           +GF     VS  L+ MYA+C     AR VFD M  R+ VSWN+M+ AY   G+   A+ +
Sbjct: 88  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 147

Query: 328 FQKMLD-------------------------------QGVEPTNVTIMEALHACADLGDL 356
           F  M D                               +GV P   T    L +C+ L +L
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207

Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGY 416
             G+ VH L  +  L  DV   ++L+ MY KC+ +D A   F  +  +  VSW A I G 
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 267

Query: 417 AQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV 476
            QN +    L  F +M+   +     +  S   + A +S +   + +HA  I++ F  + 
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 327

Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
            V TA++D+YAK  ++  AR  F  +    V T N M+ G    GLG  A+ LF  M+  
Sbjct: 328 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 387

Query: 537 PTKPNDITFLCAISACSHS-GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
             + + ++     SAC+ + G  +    +  ++K  + ++  +++  A++DL G+   L 
Sbjct: 388 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALM 445

Query: 596 EAWDFIQKMP----------------------------------IEPGITVFGAMLGACK 621
           EA+   Q M                                   ++P    +G++L AC 
Sbjct: 446 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 505

Query: 622 IHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGC 681
             +++E G    +++ +          L ++ + A+++ D   K   I E + L    G 
Sbjct: 506 ALRSLEYGLMVHDKVIKSG--------LGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 557

Query: 682 SLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVED 734
             V   N + S +S + +  ++++ ++       E+   G  PD  +   V D
Sbjct: 558 QQVVSWNAILSGFSLNKESEEAQKFFS-------EMLDMGLKPDHFTFATVLD 603


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/642 (36%), Positives = 374/642 (58%), Gaps = 18/642 (2%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           ++ +  G+V+ Y K   IEEA  +F+ MPER++VSW  +V G+ Q G    A  L  RM 
Sbjct: 78  NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E       ++   +   + + G  RI  A   Y M  G D +   ST ++    + GRV+
Sbjct: 138 ERNE----VSWTVMFGGLIDGG--RIDDARKLYDMMPGKDVVA--STNMIGGLCREGRVD 189

Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
            AR +FD M+ RNV++W +MI  Y +    + A ++F+ M     E T V+    L    
Sbjct: 190 EAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM----PEKTEVSWTSMLLGYT 245

Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
             G +E      +  + + +   V   N++I    +  ++ +A  +F +++ +   +W  
Sbjct: 246 LSGRIEDA---EEFFEVMPM-KPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRG 301

Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
           MI  Y + G   EAL  F +M+ + ++P   +++S++   A L+ ++Y + +HA ++R  
Sbjct: 302 MIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361

Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
           F+ +V+V + L+ MY KCG +  A+ +FD    + +  WN +I GY +HGLG+ A+++F+
Sbjct: 362 FDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFH 421

Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           +M    T PN +T +  ++ACS+ G +EEG+  F S++  + + P ++HY   VD+LGRA
Sbjct: 422 EMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
           G++++A + I  M I+P  TV+GA+LGACK H  ++L E AA +LFE++P+  G ++LL+
Sbjct: 482 GKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLS 541

Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFL 710
           +I A+ S W  +A++R  M  K + K PGCS +E+  +VH F  G  + HP+   I   L
Sbjct: 542 SINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMML 601

Query: 711 ETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E     ++ AGY PD ++ +HDV++  + + LS HSE+LA+A+GLL    G  I + KNL
Sbjct: 602 EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNL 661

Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           RVCGDCH A K IS VT REII+RD +RFH F NG CSC DY
Sbjct: 662 RVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 222/477 (46%), Gaps = 19/477 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           LVS + K   + +A  VFE +P++    +  M+KGY +   + +A     RM   +    
Sbjct: 85  LVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEV-- 142

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +     D G I   ++++  +       D+ A T ++    + G+++EA ++FD
Sbjct: 143 --SWTVMFGGLIDGGRIDDARKLYDMMP----GKDVVASTNMIGGLCREGRVDEAREIFD 196

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M ER++++W T++ G+ QN   ++A  L   M E+      ++  S+L      G  RI
Sbjct: 197 EMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSG--RI 250

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
             A   + +      I     A++    + G +  AR VFD M+ R+  +W  MI AY  
Sbjct: 251 EDAEEFFEVMPMKPVI--ACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYER 308

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G   EA+ +F +M  QGV P+  +++  L  CA L  L+ G  VH  L + +   DV +
Sbjct: 309 KGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            + L++MY KC ++ +A  +F +   K ++ WN++I GYA +G   EAL  F +M     
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT 428

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
            P+  T+++++ A +    +     I  ++  + C    V   +  +DM  + G V  A 
Sbjct: 429 MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488

Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE-GPTKPNDITFLCAISA 551
            L + M  +   T W  ++    TH     A     K+ E  P        L +I+A
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINA 545



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 180/354 (50%), Gaps = 14/354 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
           T ++   C+   + +A  +F+ + ++    + TM+ GY +   +D A          +V 
Sbjct: 176 TNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLF------EVM 229

Query: 136 PVVYNYTYLLKVCGDV--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY 193
           P     ++   + G    G I   +E    + +      + A   ++    + G+I +A 
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVALGEVGEIVKAR 285

Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
           ++FD+M +RD  +W  ++  + + GF   AL+L  +M  +G R  F +++SIL   A + 
Sbjct: 286 RVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLA 345

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
           SL+ G+ VH + +R  FD  V V++ L+ MY KCG +  A+LVFD   S++++ WNS+I+
Sbjct: 346 SLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIIS 405

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLG 372
            Y   G  EEA+++F +M   G  P  VT++  L AC+  G LE G+ + + ++ +  + 
Sbjct: 406 GYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVT 465

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEA 425
             V   +  + M  +  KVD+A ++ + +  K   + W A++     + R++ A
Sbjct: 466 PTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLA 519



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 42  PSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
           PS + +L VC +L  L   R++   +++          + L++++ K   L  A  VF+ 
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDR 391

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
            P K   ++++++ GYA     ++A+     M      P       +L  C   G++  G
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEG 451

Query: 158 KEIHGQLIVNGF----SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
            EI  + + + F    +++ ++ T  V+M  + G++++A ++ + M  + D   W  ++ 
Sbjct: 452 LEIF-ESMESKFCVTPTVEHYSCT--VDMLGRAGKVDKAMELINSMTIKPDATVWGALLG 508

Query: 213 GFAQNGFAELALDLVTRMH--EEGRRGDFITIVSI 245
               +   +LA     ++   E    G +I + SI
Sbjct: 509 ACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSI 543


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 341/600 (56%), Gaps = 32/600 (5%)

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETA----------- 293
           +L +  +  SL +GK +H   + +G  S   +S  L+++Y+KCG+++TA           
Sbjct: 58  LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117

Query: 294 --------------------RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
                               R +FD M  RNV +WN+M+A  ++    EE + +F +M +
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
            G  P    +   L  CA L  L  G  VH  + +     ++ + +SL  MY KC  +  
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGE 237

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
              +   +  + +V+WN +I G AQNG   E L+ +  M+    +PD  T VSVI + +E
Sbjct: 238 GERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           L+ +   + IHA VI++     V V+++LI MY++CG +  +  +F       V  W+ M
Sbjct: 298 LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I  YG HG G  A++LFN+M +   + ND+TFL  + ACSH GL E+GI +F  + + YG
Sbjct: 358 IAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYG 417

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
           ++P ++HY  MVDLLGR G + EA   I+ MP++  +  +  +L ACKIHK  E+  + +
Sbjct: 418 VKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRIS 477

Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSF 693
             +F LDP +   +VLL+NI+A+   WD ++ VR  M  + L+K PG S +E+KN++H F
Sbjct: 478 EEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQF 537

Query: 694 YSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAF 752
             G   HP+S  I ++L  L  E+K  GYVPD +S+ HD++   +E  L  HSEKLAIAF
Sbjct: 538 CMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAF 597

Query: 753 GLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            LL +  G+ I + KNLRVC DCH A KYIS ++ REIIVRD  RFH FKNG CSCGDYW
Sbjct: 598 ALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 218/445 (48%), Gaps = 34/445 (7%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY------- 193
           +++LL+ C     +  GK++H  +I +G S D F    ++N+Y+KCGQ++ A        
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 194 ------------------------KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
                                   KMFD MPER++ +WN +VAG  Q  F E  L L +R
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M+E G   D   + S+L   A + +L  G+ VHGY  + GF+  + V ++L  MY KCG 
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +     +   M S+NVV+WN++IA   + G PEE +  +  M   G  P  +T +  + +
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
           C++L  L +G  +H  + +      VS+ +SLISMYS+C  ++ +  +F + +   +V W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVI 468
           ++MI  Y  +GR  EA++ F +M  + ++ +  T +S++ A +   +     K+   +V 
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAV 527
           +   +  +   T ++D+  + G+V  A AL   M  +  V TW  ++     H   + A 
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474

Query: 528 ELFNKMLE-GPTKPNDITFLCAISA 551
            +  ++    P  P     L  I A
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHA 499



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 205/416 (49%), Gaps = 38/416 (9%)

Query: 36  SRIYRHPSAL--LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
           S I+  PS    LL+ C S   L   +++  LII SG          L++L+ K   L  
Sbjct: 46  SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDT 105

Query: 91  A-------------------------------ARVFEPIPDKLDALYHTMLKGYAKFASL 119
           A                                ++F+ +P++  A ++ M+ G  +F   
Sbjct: 106 AITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFN 165

Query: 120 DDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGV 179
           ++ +    RM      P  +    +L+ C  +  +  G+++HG +   GF  +L  ++ +
Sbjct: 166 EEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSL 225

Query: 180 VNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDF 239
            +MY KCG + E  ++   MP +++V+WNT++AG AQNG+ E  LD    M   G R D 
Sbjct: 226 AHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDK 285

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           IT VS++ + + + +L  G+ +H   ++AG   IV+V ++L+ MY++CG +E +  VF  
Sbjct: 286 ITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLE 345

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
            ++ +VV W+SMIAAY   G   EA+ +F +M  + +E  +VT +  L+AC+  G  E+G
Sbjct: 346 CENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKG 405

Query: 360 I-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
           I F   ++++  +   +     ++ +  +   V+ A  +   +  K  +++W  ++
Sbjct: 406 IKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLL 461



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 158/330 (47%), Gaps = 10/330 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +L  C  L+ L   R++   + K G     +  + L  ++ K  SL +  R+   +P + 
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              ++T++ G A+    ++ +     M+     P    +  ++  C ++  + +G++IH 
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
           ++I  G SL +  ++ +++MY++CG +E + K+F      D+V W++++A +  +G    
Sbjct: 310 EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVE 369

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-KAVHGYAMRAGFDSIVNVSTALV 281
           A+DL  +M +E    + +T +S+L A ++ G    G K       + G    +   T +V
Sbjct: 370 AIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMV 429

Query: 282 DMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPT 339
           D+  + G VE A  +   M  + +V++W ++++A       E A RI +++      +P 
Sbjct: 430 DLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPV 489

Query: 340 NVTIMEALHAC----ADLGDLERGIFVHKL 365
              ++  +HA      D+ D+ + +   KL
Sbjct: 490 PYVLLSNIHASDKRWDDVSDVRKAMRDRKL 519


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/649 (36%), Positives = 365/649 (56%), Gaps = 11/649 (1%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL  C +L  LR +   ++  GL      +TKL+S +     L+ A RV +  P      
Sbjct: 29  LLPACATLPSLRALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYT 88

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMR------YDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           Y   L  +A      DA++    MR      +DDV  +    +  LK      + R G+ 
Sbjct: 89  YRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLL----SLALKASVRSADFRYGRR 144

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           +H   +  G + D F M  +V+MYAK G +E A K+FDR+  R++VSW ++++G  QNGF
Sbjct: 145 LHCNAVKAGGA-DGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGF 203

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
           AE  L L   M EE       T+ S+L A   +GSL  G+ VHG  ++ G      ++ A
Sbjct: 204 AEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAA 263

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           ++DMY KCG VE AR +FD +   ++V W +MI  Y + G+P +A+ +F       + P 
Sbjct: 264 VLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPN 323

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           +VTI   L A A L +L  G  +H +  +L +  +  + N+L+ MY+KCK +  A  IF 
Sbjct: 324 SVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFG 383

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           ++  K +V+WN++I GY +N   NEAL  F +MR +   PD+ ++V+ + A   L  +  
Sbjct: 384 RISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLI 443

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
            K  H   ++  F  NV+V TAL+++Y KC  + +A+ +F  M+ER+  TW  MI GYG 
Sbjct: 444 GKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGM 503

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            G    +++L NKML+   +PN++ F   +S CSH+G+V  G   F S+ + + I P M 
Sbjct: 504 QGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMK 563

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           HY  MVD+L RAG L EA +FIQKMP+   I+++GA L  CK+H  +E GE+A NR+  L
Sbjct: 564 HYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVL 623

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
            PD+  ++VL++N+Y +   WDK   +R +M+++GL K PGCS V L+N
Sbjct: 624 HPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSVGLEN 672



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 207/443 (46%), Gaps = 17/443 (3%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  CT   SL + R +   +IK G+         ++ ++ K   + DA R+F+ +  
Sbjct: 227 ASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGF 286

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
               L+ TM+ GY +  S  DA+      ++  + P       +L     +  +  G+ I
Sbjct: 287 VDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLI 346

Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
           H   +      +   M  +V+MYAKC  + EA  +F R+  +D+V+WN+++AG+ +N   
Sbjct: 347 HAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMG 406

Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
             AL L ++M  +G   D I+IV+ L A   +G L IGK  H YA++  F S V V+TAL
Sbjct: 407 NEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTAL 466

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           +++Y KC  + +A+ VF  M  RN V+W +MI  Y   G+   ++ +  KML   ++P  
Sbjct: 467 LNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNE 526

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           V     L  C+  G +  G      + Q   +   +     ++ + ++   ++ A +   
Sbjct: 527 VVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQ 586

Query: 400 KLQGKTLVS-WNAMILGYAQNGRV---NEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
           K+     +S W A + G   + R+    EA+N    +     KPD + ++S +       
Sbjct: 587 KMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPD--KPDFYVLMSNL------- 637

Query: 456 VIRYAKWIHALVIRSCFEKNVFV 478
              Y +W  +L IR   ++   V
Sbjct: 638 YTSYGRWDKSLAIRRLMQERGLV 660


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/644 (36%), Positives = 380/644 (59%), Gaps = 27/644 (4%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           +  G+++ Y K G + +A K+FD MPER++VSW ++V G+ Q G  E A  L   M    
Sbjct: 85  SFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP--- 141

Query: 235 RRGDFITIVSILPAVANVGSL----RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
           RR       +++     +G L    RI  A   + M    D +V   T ++  Y + GR+
Sbjct: 142 RR-------NVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVV--VTNMIGGYCQVGRL 192

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + AR +FD MK RNV +W +M++ Y + G  + A ++F+ M     E   V+    L   
Sbjct: 193 DEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM----PERNEVSWTAMLMGY 248

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
              G ++      +L + + +   V+  N +I  +    ++ RA  +F  ++ +   +WN
Sbjct: 249 TQSGRMKEAF---ELFEAMPVKWIVA-CNEMILQFGLAGEMHRARMMFEGMKERDEGTWN 304

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
           AMI  + + G   EAL  F +M+ + +  +  +M+SV+   A L+ + + + +HA ++RS
Sbjct: 305 AMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRS 364

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
            F+++++V + LI MY KCG +  A+ +F+    + V  WN MI GY  HGLG+ A+ +F
Sbjct: 365 EFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVF 424

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
           + M     +P+++TF+  +SACS+SG V+EG   F ++K  Y +EP ++HY  MVDLLGR
Sbjct: 425 HDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGR 484

Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
           AGR++EA + ++KMP+EP   V+GA+LGAC+ H  ++L E A  +L +L+P   G +VLL
Sbjct: 485 AGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLL 544

Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTF 709
           +++YA    W  +  +R  + ++ + K PGCS +E++ +VH F  G +K HP+   I   
Sbjct: 545 SHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQM 603

Query: 710 LETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
           LE L   ++ AGY PD + + HDV++  + + L  HSE+LA+A+GLL    G  I + KN
Sbjct: 604 LEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKN 663

Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           LRVCGDCH+A K I+ VTGREII+RD +RFH FK+G CSC D+W
Sbjct: 664 LRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 223/462 (48%), Gaps = 23/462 (4%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           ++S + K   ++DA +VF+ +P++    + +M++GY +   +++A      M   +V   
Sbjct: 89  MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
                 LLK       I   K++   +       D+  +T ++  Y + G+++EA ++FD
Sbjct: 149 TVMIGGLLKE----SRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFD 200

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            M  R++ +W T+V+G+A+NG  ++A  L   M E       ++  ++L      G  R+
Sbjct: 201 EMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNE----VSWTAMLMGYTQSG--RM 254

Query: 258 GKAVHGY-AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
            +A   + AM   +    N    ++  +   G +  AR++F+GMK R+  +WN+MI  + 
Sbjct: 255 KEAFELFEAMPVKWIVACN---EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFE 311

Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
             G   EA+ +F +M  +GV     +++  L  CA L  L+ G  VH  L + +   D+ 
Sbjct: 312 RKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLY 371

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + + LI+MY KC  + RA  IF++   K +V WN+MI GY+Q+G   EALN F  M S  
Sbjct: 372 VASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG 431

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
           ++PD  T + V+ A +    ++    I  A+      E  +     ++D+  + G V  A
Sbjct: 432 VQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEA 491

Query: 496 RALFDMMN-ERHVTTWNVMIDGYGTH---GLGKAAVELFNKM 533
             L + M  E     W  ++     H    L + AVE   K+
Sbjct: 492 MELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKL 533



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 180/371 (48%), Gaps = 17/371 (4%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDV 134
           T ++  +C+   L +A  +F+ +  +    + TM+ GYAK   +D A   F +    ++V
Sbjct: 180 TNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV 239

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           +     +T +L      G ++   E+   + V      + A   ++  +   G++  A  
Sbjct: 240 S-----WTAMLMGYTQSGRMKEAFELFEAMPVKW----IVACNEMILQFGLAGEMHRARM 290

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           MF+ M ERD  +WN ++  F + G    AL L  RM  EG   +F +++S+L   A++ S
Sbjct: 291 MFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLAS 350

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  G+ VH   +R+ FD  + V++ L+ MY KCG +  A+ +F+    ++VV WNSMI  
Sbjct: 351 LDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITG 410

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGT 373
           Y + G  EEA+ +F  M   GV+P  VT +  L AC+  G ++ G  + + +    ++  
Sbjct: 411 YSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEP 470

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMILGYAQN----GRVNEALNY 428
            +     ++ +  +  +VD A ++  K+  +   + W A +LG  +N         A+  
Sbjct: 471 GIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA-LLGACRNHMKLDLAEVAVEK 529

Query: 429 FCKMRSKNIKP 439
             K+  KN  P
Sbjct: 530 LAKLEPKNAGP 540



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 164/409 (40%), Gaps = 83/409 (20%)

Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
            A+V  Y +  +   A L+FD M  RN VS+N MI+ YV+ G   +A ++F  M ++ V 
Sbjct: 56  NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNV- 114

Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
              V+    +      G +E      KL  ++     VS T  +I    K  ++D A  +
Sbjct: 115 ---VSWTSMVRGYVQEGMVEEA---EKLFWEMPRRNVVSWT-VMIGGLLKESRIDDAKKL 167

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  +  K +V    MI GY Q GR++EA   F +M+ +N                     
Sbjct: 168 FDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRN--------------------- 206

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
                             VF  T ++  YAK G V  AR LF++M ER+  +W  M+ GY
Sbjct: 207 ------------------VFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGY 248

Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-------SGLVEEGIHYFTSLK- 569
              G  K A ELF  M   P K         I AC+        +G +      F  +K 
Sbjct: 249 TQSGRMKEAFELFEAM---PVK--------WIVACNEMILQFGLAGEMHRARMMFEGMKE 297

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM---LGACKIHKNV 626
           +D G       + AM+ +  R G   EA     +M  E     F +M   L  C    ++
Sbjct: 298 RDEGT------WNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASL 351

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           + G +   RL   + D+        ++Y A+ +     K   ++  KG+
Sbjct: 352 DHGRQVHARLVRSEFDQ--------DLYVASVLITMYVKCGDLVRAKGI 392



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 41/245 (16%)

Query: 353 LGDLE--RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           +GD+   R +F +  L Q  + +     N+++S Y +  K   A  +F ++  +  VS+N
Sbjct: 32  IGDIHNARKVFDNTPLPQRTIAS----WNAMVSAYFESHKPRDALLLFDQMPQRNTVSFN 87

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNI---------------------------KPDSFT 443
            MI GY +NG V +A   F  M  +N+                           + +  +
Sbjct: 88  GMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVS 147

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
              +I  L + S I  AK +  ++     EK+V V+T +I  Y + G +  AR LFD M 
Sbjct: 148 WTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFDEMK 203

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
            R+V TW  M+ GY  +G    A +LF  M E     N++++   +   + SG ++E   
Sbjct: 204 VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPE----RNEVSWTAMLMGYTQSGRMKEAFE 259

Query: 564 YFTSL 568
            F ++
Sbjct: 260 LFEAM 264


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/555 (40%), Positives = 335/555 (60%), Gaps = 2/555 (0%)

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           + + A A   +L   + +H +   + F     +  +L+ +Y KCG V  A  VFD M+++
Sbjct: 56  AFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNK 115

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           ++VSW S+IA Y +   P EA+ +   ML    +P   T    L A     D   G  +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIH 175

Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
            L  +     DV + ++L+ MY++C K+D A  +F KL  K  VSWNA+I G+A+ G   
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
            AL  F +M+    +   FT  S+  ALA +  +   KW+HA +I+S  +   FV   ++
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTML 295

Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
           DMYAK G++  AR +F+ +  + + TWN M+  +  +GLGK AV  F +M +     N I
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           +FLC ++ACSH GLV+EG HYF  + K+Y +EP ++HY  +VDLLGRAG LN A  FI K
Sbjct: 356 SFLCILTACSHGGLVKEGKHYFDMI-KEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFK 414

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP+EP   V+GA+L AC++HKN ++G+ AA+ +F+LDPD+ G  VLL NIYA+   WD  
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAA 474

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           A+VR +M+  G++K P CS VE++N VH F +    HP+++ IY   + +  +I+  GYV
Sbjct: 475 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYV 534

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
           PD + +   V++  +E  L  HSEK+A+AF L+    G+TI I KN+R+CGDCH+A KYI
Sbjct: 535 PDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 783 SLVTGREIIVRDMHR 797
           S V  REI++  +H+
Sbjct: 595 SKVFEREIVIIHLHK 609



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 202/383 (52%), Gaps = 1/383 (0%)

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           ++AP    Y   +  C     +   ++IH  L  + F+ D F    ++++Y KCG + EA
Sbjct: 46  ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           +K+FD+M  +D+VSW +++AG+AQN     A+ L+  M +   + +  T  S+L AV   
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAY 165

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
               IG  +H  A++  +   V V +AL+DMYA+CG+++ A  VFD + S+N VSWN++I
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           + +   G+ E A+ +F +M   G E T+ T      A A +G LE+G +VH  + + +  
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQK 285

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
               + N+++ MY+K   +  A  +F ++  K LV+WN+M+  +AQ G   EA+++F +M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           R   I  +  + + ++ A +   +++  K    ++     E  +     ++D+  + G +
Sbjct: 346 RKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLL 405

Query: 493 GTARA-LFDMMNERHVTTWNVMI 514
             A   +F M  E     W  ++
Sbjct: 406 NYALVFIFKMPMEPTAAVWGALL 428



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 194/394 (49%), Gaps = 2/394 (0%)

Query: 21  LHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVS 80
           LH+  H  S       R+Y H          +L + R+I   +  S           L+ 
Sbjct: 36  LHDLDHLDSGELAPTPRVY-HAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIH 94

Query: 81  LFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYN 140
           L+CK  S+ +A +VF+ + +K    + +++ GYA+     +A+  L  M      P  + 
Sbjct: 95  LYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFT 154

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           +  LLK  G   +   G +IH   +   +  D++  + +++MYA+CG+++ A  +FD++ 
Sbjct: 155 FASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            ++ VSWN +++GFA+ G  E AL +   M   G      T  SI  A+A +G+L  GK 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKW 274

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH + +++       V   ++DMYAK G +  AR VF+ + ++++V+WNSM+ A+ + G 
Sbjct: 275 VHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGL 334

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
            +EA+  F++M   G+    ++ +  L AC+  G ++ G     ++ +  L  ++    +
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVT 394

Query: 381 LISMYSKCKKVDRA-ADIFSKLQGKTLVSWNAMI 413
           ++ +  +   ++ A   IF      T   W A++
Sbjct: 395 VVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALL 428



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 332 LDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           LD G + PT       + ACA   +L+    +H  L   +   D  + NSLI +Y KC  
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGS 101

Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
           V  A  +F K++ K +VSW ++I GYAQN    EA+     M     KP+ FT  S++ A
Sbjct: 102 VVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 451 LAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
           +   +       IHAL ++  + ++V+V +AL+DMYA+CG +  A A+FD ++ ++  +W
Sbjct: 162 VGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221

Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           N +I G+   G G+ A+ +F +M     +    T+    SA +  G +E+G
Sbjct: 222 NALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQG 272


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/740 (33%), Positives = 395/740 (53%), Gaps = 63/740 (8%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           ++   +  ++  A   FE +P +  A Y+ +L GY +    D A+    RM   D+A   
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA--- 80

Query: 139 YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDR 198
              +Y   + G     +   +    L    F   + + T ++  Y + G + +A ++F +
Sbjct: 81  ---SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           MPER+ VS+  ++ G    G    A  L   M +     D +   ++L      G  RI 
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG--RIT 191

Query: 259 KAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           +A      RA FD +    V   TA++  YA+ G V  AR +F+ M  RN VSW +M+  
Sbjct: 192 EA------RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVG 245

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y++ G+ E+A  +F  M +  V   N  +         +G  +RG+              
Sbjct: 246 YIQAGHVEDAAELFNAMPEHPVAACNAMM---------VGFGQRGM-------------- 282

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
                           VD A  +F K++ +   +W+AMI  Y QN  + EAL+ F +M  
Sbjct: 283 ----------------VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326

Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
           + ++P+  +++S++   A L+V+ Y + +HA ++R  F+ +VF ++ALI MY KCG +  
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDK 386

Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
           A+ +F     + +  WN MI GY  HGLG+ A+ +F+ M      P+ IT++ A++ACS+
Sbjct: 387 AKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSY 446

Query: 555 SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFG 614
           +G V+EG   F S+  +  I P  +HY  MVDLLGR+G + EA+D I+ MP+EP   ++G
Sbjct: 447 TGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWG 506

Query: 615 AMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKG 674
           A++GAC++H+N E+ E AA +L EL+P   G +VLL++IY +   W+  +K+R  +  + 
Sbjct: 507 ALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRN 566

Query: 675 LQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
           L K+PGCS +E    VH F SG    HP+   I   LE L   +  +GY  D + + HD+
Sbjct: 567 LNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDI 626

Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
           ++  + + L  HSE+ A+A+GLL    G  I + KNLRVCGDCH+A K I+ +T REI++
Sbjct: 627 DEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVL 686

Query: 793 RDMHRFHCFKNGVCSCGDYW 812
           RD +RFH FK+G CSC DYW
Sbjct: 687 RDANRFHHFKDGFCSCRDYW 706



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 223/466 (47%), Gaps = 21/466 (4%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +   +  L  +  +L DAA     IP     + + ++L+GY +   L DA+    +M   
Sbjct: 82  YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +      +YT LL    D G +   + +  ++       D+ A T +++ Y + G+I EA
Sbjct: 142 NHV----SYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITEA 193

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD MP+R++VSW  +++G+AQNG   LA  L   M E       ++  ++L     V
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE----VSWTAML-----V 244

Query: 253 GSLRIGKAVHGYAM-RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           G ++ G       +  A  +  V    A++  + + G V+ A+ VF+ M+ R+  +W++M
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAM 304

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I AY +     EA+  F++ML +GV P   +++  L  CA L  L+ G  VH  + +   
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             DV   ++LI+MY KC  +D+A  +F   + K +V WN+MI GYAQ+G   +AL  F  
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCG 490
           MR   + PD  T +  + A +    ++  + I +++ + S         + ++D+  + G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            V  A  L  +M  E     W  ++     H   + A     K+LE
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLE 530



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 31/316 (9%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
            H+  T L+        +++A R+F+ +PD+    +  ML GY +   + +A +    M 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGK----------EIHGQLIVNGF--------SLD 172
             +V     ++T ++      GE+   +          E+    ++ G+        + +
Sbjct: 202 KRNVV----SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257

Query: 173 LF---------AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           LF         A   ++  + + G ++ A  +F++M ERD  +W+ ++  + QN F   A
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEA 317

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L     M   G R ++ +++SIL   A +  L  G+ VH   +R  FD  V   +AL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG ++ A+ VF   + +++V WNSMI  Y + G  E+A+ IF  M   G+ P  +T 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 344 MEALHACADLGDLERG 359
           + AL AC+  G ++ G
Sbjct: 438 IGALTACSYTGKVKEG 453


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/756 (31%), Positives = 415/756 (54%), Gaps = 15/756 (1%)

Query: 66  SGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF 125
           SGL    +  T +++++ +  S+S A R F+ +  +    +  M+  YA+     DA+  
Sbjct: 71  SGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALEL 130

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYA 184
            +RM ++ V      +  +L  C  +  I  GK IH +++ +G    D+     +VNMY 
Sbjct: 131 FVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYG 190

Query: 185 KCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVS 244
           KCG+++ A ++F+RM  ++ V+WNT++A  +++   + A  L+  M  +G R + IT+VS
Sbjct: 191 KCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVS 250

Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
           ++ A A + S+  G+ VH      G +S   V+ ALV++Y KCG++  AR   +G+++R+
Sbjct: 251 VIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRD 310

Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
            +SW +++AAY   G+ + A+ + ++M  +GV+  + T +  L +C  +  L  G  +H 
Sbjct: 311 KISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHD 370

Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGRVN 423
            L +  +  D  +  +L+ MY KC   D A   F ++   + +  WNA++  Y    +  
Sbjct: 371 RLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGK 430

Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI-RSCFEKNV-----F 477
           E L  F +M  + + PD+ T +S++ A A L+ +   +  H+ ++ R  F++        
Sbjct: 431 ETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADL 490

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERH---VTTWNVMIDGYGTHGLGKAAVELFNKML 534
           + T++I+MYAKCG++  A+A F          V  W+ M+  Y   GL + A+  F  M 
Sbjct: 491 LTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQ 550

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
           +   KP+ ++F+ AI+ CSHSGLV E + +FTSL+ D+GI P   H+  +VDLL RAG +
Sbjct: 551 QEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWI 610

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
            EA   +++ P+    + +  +L AC+ + ++E   + A RL  L    G  + LLA+++
Sbjct: 611 REAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRS--GSAYSLLASVF 668

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETL 713
             +  WD +   R  + ++G    PGCS +E+ N V+ F++G  +  P+ + I+  LE L
Sbjct: 669 CLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERL 728

Query: 714 IDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
             EI+ AGY  D    +HD  +  ++ LLS HSEK+A+ FGL+++  G+ + I KN+ VC
Sbjct: 729 CVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVC 788

Query: 773 GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
            DCH   K IS V  R I +RD   FH F +G CSC
Sbjct: 789 QDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 255/480 (53%), Gaps = 16/480 (3%)

Query: 98  IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
           + D+    ++  +  YA+      A+     M  + VAP   +   +L     +G++ +G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 158 KEIHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           +  H  +   +G   D+   T V+ MY +CG +  A + FD M  R++VSW+ ++A +AQ
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIV 274
            G    AL+L  RM  EG + + IT VS+L A A++ ++ +GK++H   +  G   D ++
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
            +   +V+MY KCG V+ AR VF+ M+++N V+WN+MIAA       +EA  +  +M   
Sbjct: 181 -LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLD 239

Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           G+ P  +T++  + ACA +  + RG  VH+++    L +D ++ N+L+++Y KC K+  A
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299

Query: 395 ADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAEL 454
                 ++ +  +SW  ++  YA++G    A+    +M  + +K DSFT V+++ +   +
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 455 SVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE-RHVTTWNVM 513
           + +   + IH  +  S  E +  + TAL+DMY KCG    AR  FD M++ R VT WN +
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC-----------SHSGLVEEGI 562
           +  Y     GK  + +F +M      P+ +TFL  + AC           +HS ++E G+
Sbjct: 420 LAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 479



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 228/434 (52%), Gaps = 25/434 (5%)

Query: 199 MPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG 258
           M +R   SWN  +A +A+NG    AL++   M  EG   D ++ ++IL A A++G L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 259 KAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           +  H     A G  S V V+TA++ MY +CG V  AR  FD M  RNVVSW++MIAAY +
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH-KLLDQLKLGTDVS 376
            G+P +A+ +F +M  +GV+   +T +  L ACA +  +  G  +H +++    LG DV 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           + N++++MY KC +VD A ++F +++ K  V+WN MI   +++ R  EA     +M    
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P+  T+VSVI A A +  I   + +H +V     E +  V  AL+++Y KCG +  AR
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS--- 553
              + +  R   +W  ++  Y  HG GK A+ +  +M     K +  TF+  + +C    
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360

Query: 554 --------HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
                   H  L E GI           ++PV+    A+VD+ G+ G  + A     +M 
Sbjct: 361 ALALGEEIHDRLAESGIE----------LDPVLQ--TALVDMYGKCGNPDAARRAFDRMS 408

Query: 606 IEPGITVFGAMLGA 619
               +TV+ A+L A
Sbjct: 409 DVRDVTVWNALLAA 422



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 241/492 (48%), Gaps = 16/492 (3%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLC-DQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
           +L+ C S++ +   + I   I+  GL  D  +    +V+++ K   +  A  VFE +  K
Sbjct: 149 VLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK 208

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
               ++TM+   ++     +A + L  M  D + P       ++  C  +  I RG+ +H
Sbjct: 209 NAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVH 268

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             +   G   D      +VN+Y KCG++  A    + +  RD +SW T++A +A++G  +
Sbjct: 269 EIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGK 328

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A+ ++ RM  EG + D  T V++L +   + +L +G+ +H     +G +    + TALV
Sbjct: 329 RAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALV 388

Query: 282 DMYAKCGRVETARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
           DMY KCG  + AR  FD M   R+V  WN+++AAYV     +E + IF +M  QGV P  
Sbjct: 389 DMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDA 448

Query: 341 VTIMEALHACADLGDLERGIFVHK------LLDQLKLGTDVSMTNSLISMYSKCKKVDRA 394
           VT +  L ACA L  L  G   H       L D+  + +   +T S+I+MY+KC  +  A
Sbjct: 449 VTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADA 508

Query: 395 ADIFSK---LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
              F+K    +   +V+W+AM+  Y+Q G   EAL  F  M+ + +KPDS + VS I   
Sbjct: 509 KAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGC 568

Query: 452 AELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTT 509
           +   ++R A  +  +L               L+D+ ++ G +  A AL        H +T
Sbjct: 569 SHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHST 628

Query: 510 WNVMIDGYGTHG 521
           W  ++    T+G
Sbjct: 629 WMTLLSACRTYG 640


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/561 (40%), Positives = 324/561 (57%), Gaps = 8/561 (1%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G+ +H      GF         LV MYAKCG ++ AR +F+G+  R VVSW++MI AY  
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 318 GGNPEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLL---DQLKLGT 373
            G  +EA+ +F +M + G VEP  +T     +AC  + DLE+G  +H L     +LK  +
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK-SS 122

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           +  + N+L++MY +C  ++ A  +F  +      SW +MI    +N  + EAL  F +M 
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
            + I P S T+ SV+ A A    ++  K IH+ +  S F  +V   TAL+DMYAKCG++ 
Sbjct: 183 LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242

Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISAC 552
            +  +F  M  R+  +W  MI     HG G  A+ELF +M LEG    +  TF+C + AC
Sbjct: 243 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMV-ADATTFICVLRAC 301

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           SH+GL++E + +F S+ +DY I P   HY   +D +GRAGRL +A + I  MP  P    
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLT 361

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +  +L AC+IH   E   K A  L +L P++   + LL N+YAA   +    +VR  M  
Sbjct: 362 WKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTD 421

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HD 731
           +GL+K PG S +E+KN+VH F +G   HP    I   LE L   ++ AGYVP+T  + H 
Sbjct: 422 RGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHA 481

Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           V +  +E L+  HSEKLAIAFGL+ + PG+ + I KNLRVC DCH ATK I+ +  R I+
Sbjct: 482 VNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIV 541

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD HRFH F++G CSC DYW
Sbjct: 542 VRDTHRFHHFEDGQCSCKDYW 562



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           ++E RRI   +   G     + Q  LVS++ K   L +A  +F  I ++    +  M+  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 113 YAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-- 169
           YA      +A+    RMR D  V P    +T +   CG + ++ +G+EIH   + +G   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
           S +      ++NMY +CG +EEA K+FD M   D  SW +++    +N     AL+L  R
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M+ EG     +T+ S+L A A  G+L++GK +H     +GF S V   TAL+DMYAKCG 
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGS 240

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
           +E +  VF  M++RN VSW +MIAA  + G  +EA+ +F++M  +G+     T +  L A
Sbjct: 241 LECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300

Query: 350 CADLGDLERGI-FVHKLLD 367
           C+  G ++  + F H +++
Sbjct: 301 CSHAGLIKESLEFFHSMVE 319



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 7/272 (2%)

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +E G  +H  L            N L+SMY+KC  +D A  IF+ +  +T+VSW+AMI  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 416 YAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
           YA +GR  EAL  F +MR+   ++P++ T   V  A   +  +   + IHAL + S   K
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 475 --NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNK 532
             N  +  AL++MY +CG++  AR +FD M+     +W  MI     +     A+ELF++
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 533 M-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
           M LEG   P  +T    ++AC+ SG ++ G    + L    G    +    A++D+  + 
Sbjct: 181 MNLEG-IPPTSVTLASVLNACACSGALKVGKQIHSRLDAS-GFHSSVLAQTALLDMYAKC 238

Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
           G L  +      M     ++ + AM+ A   H
Sbjct: 239 GSLECSSKVFTAMETRNSVS-WTAMIAALAQH 269



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 75/173 (43%), Gaps = 5/173 (2%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L  C    +LK  ++I   +  SG     L QT L+ ++ K  SL  +++VF  +  
Sbjct: 194 ASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMET 253

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           +    +  M+   A+    D+A+     M  + +      +  +L+ C   G I+   E 
Sbjct: 254 RNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEF 313

Query: 161 HGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
              ++ +   +         ++   + G++++A ++   MP   + ++W T++
Sbjct: 314 FHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLL 366


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/641 (38%), Positives = 366/641 (57%), Gaps = 5/641 (0%)

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVA 212
           +   +IH QLI        F    ++N+YAKCG +++   +F   P+  +++VSW +++ 
Sbjct: 44  KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103

Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS 272
              +      AL     M   G   +  T  ++L A  +  +   G+ +H    + GF +
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLA 163

Query: 273 IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
            V V +ALVDMYAKC  +  A  VF+ M  RN+VSWN+MI  +++    ++A+  F+ +L
Sbjct: 164 EVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLL 223

Query: 333 DQGVEPTN-VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
            + +   + V+      ACA+ G+LE G  VH +  +L +   V + NSL  MY KC   
Sbjct: 224 LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLF 283

Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
           +  A +FS    + +V+WN MI+ Y  N    +A N F  MR K   PD  +  SV+ + 
Sbjct: 284 NDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSC 343

Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
           A L+ +     IH  +IRS F KN+ V ++LI MYAKCG++  A  +F+   +R+V  W 
Sbjct: 344 ANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWT 403

Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
            +I     HG     VELF +ML    KP+ ITF+  +SACSH+G VEEG  YF S+ K 
Sbjct: 404 AIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV 463

Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEK 631
           +GI P  +HY  +VDLL RAG L+ A  FI+ MPI+P  +V+GA+L AC+ H N+ +G++
Sbjct: 464 HGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKE 523

Query: 632 AANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVH 691
            A +LF+L+PD  G +VLL NI     M ++  +VR  ME  G++K PGCS +++KN  +
Sbjct: 524 VALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTY 583

Query: 692 SFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAI 750
            F      H ++K IY  LE L + +K  GYV +T  +I+  E+Y +E  L  HSEK+A+
Sbjct: 584 VFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAEEY-KEQSLWYHSEKIAL 642

Query: 751 AFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
           AFGLL+   G+ I I+KNLR CGDCH   K+ S +  REII
Sbjct: 643 AFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 259/529 (48%), Gaps = 22/529 (4%)

Query: 46  LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
           LL    + K   +I   +I + L         L++L+ K  S+     +F   PD    +
Sbjct: 36  LLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNV 95

Query: 106 --YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
             + +++    +F     A++F   MR   V P  Y ++ +L  C D      G+++H  
Sbjct: 96  VSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSL 155

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +  +GF  ++F ++ +V+MYAKC  +  A K+F+ MP R+LVSWNT++ GF QN   + A
Sbjct: 156 VWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQA 215

Query: 224 LDLV-TRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           +    T + E     D ++  S+  A AN G+L  GK VHG A++ G  ++V ++ +L D
Sbjct: 216 IFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSD 275

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
           MY KCG       +F    +R+VV+WN MI AYV   N E+A   F  M  +G  P   +
Sbjct: 276 MYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEAS 335

Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
               LH+CA+L  L +G  +H  + +     ++ + +SLI+MY+KC  +  A  IF + +
Sbjct: 336 YSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE 395

Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA-----ELSVI 457
            + +V W A+I    Q+G  N  +  F +M  + IKPD  T VSV+ A +     E    
Sbjct: 396 DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFF 455

Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDG 516
            +   I    I    E        ++D+ ++ G +  A+   ++M  +   + W  ++  
Sbjct: 456 YFNSMIKVHGIYPGHEH----YACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511

Query: 517 YGTHG---LGK-AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
              H    +GK  A++LF+  LE P  P +   LC I   + +G++ E 
Sbjct: 512 CRNHSNLIMGKEVALKLFD--LE-PDNPGNYVLLCNI--LTRNGMLNEA 555


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/678 (32%), Positives = 386/678 (56%), Gaps = 7/678 (1%)

Query: 46  LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C+SL+ L   R+I   ++        + Q  ++S++ K  SL +A  +F+ +P K 
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              + +M+ GY+++   D+A++  ++M      P  + +  ++K C  + + +  +++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
            ++ + F  DL A   +++MY K  Q+ +A  +F R+  +DL+SW +++AGF+Q G+   
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 223 ALDLVTRMHEEG--RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
           AL     M  +   +  +F+   S   A + +     G+ +HG  ++ G  S +    +L
Sbjct: 284 ALCHFREMLSQSVYQPNEFV-FGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSL 342

Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            DMYAKCG +E+AR VF  ++  ++V+WN++IA +    N +E+   F +M   G+ P +
Sbjct: 343 CDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
           VT++  L AC++   L  GI VH  + ++    D+ + NSL+SMYSKC  ++ A  +F  
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462

Query: 401 LQGKT-LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
           +  K  +VSWN ++    Q  +  E L     M +  IKPD  T+ +V+ +  +++    
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
              IH  +++S    ++ V  ALI+MY KCG++  AR +FD +    + +W+ +I GY  
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582

Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
            G GK A ELF  M     KPN+ITF+  ++ACSH G+VEEG+  + ++++DY I P  +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642

Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
           H   MVDLL RAG L+ A DFI++MP  P + V+  +L ACK+H N+E+G++AA  + ++
Sbjct: 643 HCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKI 702

Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
           DP      V+L NI+A++  W   A++R+ M +  + K PG S +E+K++VH F +    
Sbjct: 703 DPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNL 762

Query: 700 HPQSKRIYTFLETLIDEI 717
           HP+  +IYT LE L+ +I
Sbjct: 763 HPERGKIYTMLEELMLQI 780



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 239/464 (51%), Gaps = 13/464 (2%)

Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
           YT+L+  C  +  +  G++IH  ++   +  D+     +++MY KCG ++EA  MFD MP
Sbjct: 101 YTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMP 160

Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +++VSW ++++G+++ G  + A+ L  +M   G   D  T  SI+ + + +   ++ + 
Sbjct: 161 LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQ 220

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H + +++ F + +    AL+ MY K  ++  A  VF  +  ++++SW SMIA + + G 
Sbjct: 221 LHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGY 280

Query: 321 PEEAMRIFQKMLDQGV-EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EA+  F++ML Q V +P       A  AC+ L + + G  +H L  +  LG+D+    
Sbjct: 281 ELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGC 340

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           SL  MY+KC  ++ A  +F  ++   LV+WNA+I G+A      E+ ++F +MR   + P
Sbjct: 341 SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVP 400

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T++S++ A +E  ++ +   +H+ +++  F  ++ V  +L+ MY+KC  +  A  +F
Sbjct: 401 NDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVF 460

Query: 500 -DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
            D+ N+  + +WN ++            + L   M     KP+ +T    + +       
Sbjct: 461 EDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASY 520

Query: 559 EEG--IHYF---TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           E G  IH F   + L  D  +        A++++  + G L  A
Sbjct: 521 EVGSQIHCFIMKSGLNLDISVS------NALINMYTKCGSLECA 558



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 230/445 (51%), Gaps = 15/445 (3%)

Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
           +T   ++ A +++ SL  G+ +H + +   +   + +   ++ MY KCG ++ AR +FD 
Sbjct: 99  VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158

Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           M  +NVVSW SMI+ Y   G  + A+ ++ +ML  G  P + T    + +C+ L D +  
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218

Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
             +H  + + + G D+   N+LISMY+K  ++  A ++FS++  K L+SW +MI G++Q 
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278

Query: 420 GRVNEALNYFCKMRSKNI-KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
           G   EAL +F +M S+++ +P+ F   S   A ++L      + IH L I+     ++F 
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338

Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPT 538
             +L DMYAKCG + +AR +F  + +  +  WN +I G+ +    K +   F++M     
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 539 KPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
            PND+T L  + ACS   ++  GI   + + K  G    +    +++ +  +   LN+A 
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNLNDAL 457

Query: 599 DFIQKMPIEPGITVFGAMLGACKIHKNVELGE--KAANRLF--ELDPDEGGYHVLLANIY 654
              + +  +  I  +  +L AC + +N + GE  +    +F   + PD    HV L N+ 
Sbjct: 458 QVFEDIGNKADIVSWNTLLTAC-LQQN-QAGEVLRLTKLMFASRIKPD----HVTLTNVL 511

Query: 655 AAA---SMWDKLAKVRTIMEKKGLQ 676
            ++   + ++  +++   + K GL 
Sbjct: 512 VSSGQIASYEVGSQIHCFIMKSGLN 536



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 323 EAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLI 382
           +A  IFQK     ++  +VT    ++AC+ L  LE G  +H+ +       D+ + N ++
Sbjct: 83  KAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 383 SMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSF 442
           SMY KC  +  A ++F  +  K +VSW +MI GY++ G  + A+  + +M      PD F
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 443 TMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           T  S++ + + L   + A+ +HA V++S F  ++    ALI MY K   +  A  +F  +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 503 NERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACS 553
             + + +W  MI G+   G    A+  F +ML +   +PN+  F  A SACS
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACS 312


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 339/566 (59%), Gaps = 15/566 (2%)

Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG-----RVETARLVFDGMKSRNVVSW 308
           SL   K  H   +R G      ++ +LV  YA          E++  VFD ++  NV  W
Sbjct: 67  SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLW 126

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
           N MI   +E   P +A+ ++ +M+     P   T    L AC+D G +  G+ VH  L +
Sbjct: 127 NCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 186

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
             LG D  + +S I MY+   ++  A  I     G+     +A+ +   + G   EAL  
Sbjct: 187 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV----DAVCMP-DRKGCFMEALEI 241

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           F +M+ + I+P  F + SV+ A A L  +   +WIH    R+  + +  + T+L+DMYAK
Sbjct: 242 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 301

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG +  A  +F+ M+ + V++WN MI G   HG  + A++LF+KM      PN+ITF+  
Sbjct: 302 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGV 358

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           ++AC+H GLV++G+  F S++K+YG+EP ++HYG +VDLLGRAG L EA   +  +P EP
Sbjct: 359 LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 418

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              V+GA+LGAC+ H NVELGE+    L EL+P   G + LL+NIYA A  W+++ +VR 
Sbjct: 419 TPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRK 478

Query: 669 IMEKKGLQKTPGCSLVEL-KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
           +M+++G++ TPG S+++L + EVH F  G   HPQ K IY  L+ + + ++  GY PD +
Sbjct: 479 LMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPS 538

Query: 728 SI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVT 786
            +  D+++  +E  +  HSEKLAI FGL+N+SPG+TI I KNLRVC DCH+ATK IS V 
Sbjct: 539 QVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVY 598

Query: 787 GREIIVRDMHRFHCFKNGVCSCGDYW 812
            REIIVRD  R+H F+NG CSC D+W
Sbjct: 599 NREIIVRDRIRYHHFRNGACSCKDFW 624



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 194/421 (46%), Gaps = 20/421 (4%)

Query: 13  TNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLL---EVCTSLKELRRILPLIIKSGLC 69
           T +T T+  + H H +       +    H + L L   +  TSL  L++   LI+++G  
Sbjct: 25  TATTATEAPYHHHHLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHL 84

Query: 70  DQHLFQTKLVSLFC-----KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
                   LV  +      +Y S   + RVF+ +      L++ M+K   +      A+ 
Sbjct: 85  QDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAIL 144

Query: 125 FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA 184
               M      P  Y Y  +LK C D G +  G ++H  L+ +G   D   ++  + MYA
Sbjct: 145 LYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYA 204

Query: 185 KCGQIEEAYKMFD-RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
             G++ EA ++ D +  E D V        F +      AL++  +M +E  R     + 
Sbjct: 205 SFGRLVEARRILDDKGGEVDAVCMPDRKGCFME------ALEIFHQMQKEKIRPRKFVLP 258

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           S+L A AN+G+L  G+ +H YA R        + T+LVDMYAKCGR++ A  VF+ M ++
Sbjct: 259 SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK 318

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV- 362
            V SWN+MI      G  E+A+ +F KM    + P  +T +  L+ACA  G +++G+ + 
Sbjct: 319 EVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIF 375

Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK-TLVSWNAMILGYAQNGR 421
           + +  +  +   +     ++ +  +   +  A  + S +  + T   W A++    ++G 
Sbjct: 376 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 435

Query: 422 V 422
           V
Sbjct: 436 V 436


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/505 (42%), Positives = 329/505 (65%), Gaps = 8/505 (1%)

Query: 315 YVEGGNPEEAMRIFQKML--DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
           YV       ++ +F+ M+  D          + A  A A + D      +H L+ ++   
Sbjct: 171 YVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 230

Query: 373 TDVSMTNSLISMYSK--CKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
            +  + N+++  Y+K   + ++ A  +F  ++ + +VSWN+MI  YAQNG   EA+  + 
Sbjct: 231 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYS 289

Query: 431 KMRS--KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
           KM +    IK ++  + +V+ A A    I+  K IH  V+R   E+NV+V T+++DMY+K
Sbjct: 290 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 349

Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCA 548
           CG V  A   F  + E+++ +W+ MI GYG HG G+ A+E+F +M     +PN ITF+  
Sbjct: 350 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 409

Query: 549 ISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEP 608
           ++ACSH+GL++EG +++ ++K+++GIE  ++HYG MVDLLGRAG L+EA+  I++M ++P
Sbjct: 410 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 469

Query: 609 GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRT 668
              ++GA+L AC+IHKNVEL E +  RLFELD    GY+VLL+NIYA A MW  + ++R 
Sbjct: 470 DAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRL 529

Query: 669 IMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS 728
           +++ + ++K PG S  ELK +++ FY G   HPQ   IY++LE L++ ++ AGYVP+T S
Sbjct: 530 LVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGS 589

Query: 729 I-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTG 787
           + HD+++  +E+ L  HSEKLA+AF L+NS P S IHI KNLRVC DCH A K+I+ +T 
Sbjct: 590 VLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITE 649

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           REII+RD+ RFH FK+G+CSC DYW
Sbjct: 650 REIIIRDLQRFHHFKDGLCSCRDYW 674



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 13/331 (3%)

Query: 91  AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
           + +   P P     L+H    GY +   +  ++     M   D A VV     L+     
Sbjct: 153 STKSLTPTPSS-SPLWHF---GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 208

Query: 151 VGEIRRG--KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--IEEAYKMFDRMPERDLVS 206
                RG    +H  +   GF  +   +  +++ YAK G   +E A K+FD M ERD+VS
Sbjct: 209 ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 267

Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGR--RGDFITIVSILPAVANVGSLRIGKAVHGY 264
           WN+++A +AQNG +  A+ L ++M   G   + + + + ++L A A+ G+++ GK +H  
Sbjct: 268 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 327

Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
            +R G +  V V T++VDMY+KCGRVE A   F  +K +N++SW++MI  Y   G  +EA
Sbjct: 328 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 387

Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ-LKLGTDVSMTNSLIS 383
           + IF +M   G+ P  +T +  L AC+  G L+ G + +  + Q   +   V     ++ 
Sbjct: 388 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 447

Query: 384 MYSKCKKVDRAADIFSKLQGKTLVS-WNAMI 413
           +  +   +D A  +  +++ K   + W A++
Sbjct: 448 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 478



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 2/178 (1%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +RI   +++ GL +     T +V ++ K   +  A+R F  I +K    +  M+ GY   
Sbjct: 322 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 381

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFA 175
               +A+     M+   + P    +  +L  C   G +  G+  +  +    G    +  
Sbjct: 382 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 441

Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
              +V++  + G ++EAY +   M  + D   W  +++    +   ELA   V R+ E
Sbjct: 442 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 499


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/557 (38%), Positives = 341/557 (61%), Gaps = 5/557 (0%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R G      +   L+   +KC  ++ A  +F    + NV  + ++I  +V  GN
Sbjct: 51  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
             +A++++ +ML   + P N  +   L AC     L  G  VH    +L L ++  +   
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170

Query: 381 LISMYSKCKKVDRAADIFSKLQ----GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           ++ +Y KC ++  A  +F ++      K  V W AMI G+ +N  +N AL  F  M+ +N
Sbjct: 171 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN 230

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
           ++P+ FT+V V+ A ++L  +   +W+H+ + +   E N+FV  ALI+MY++CG++  A+
Sbjct: 231 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 290

Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
            +FD M +R V T+N MI G   +G  + A+ELF  M+    +P ++TF+  ++ACSH G
Sbjct: 291 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGG 350

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
           LV+ G   F S+ +DYG+EP ++HYG MVDLLGR GRL EA+D I+ M + P   + G +
Sbjct: 351 LVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTL 410

Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
           L ACK+HKN+ELGE+ A  L +    + G +VLL+++YA++  W + A+VR  M++ G+Q
Sbjct: 411 LSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 470

Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
           K PGCS +E+ NE+H F  G  +HP+ +RIY  LE L   ++  GY P+   +  D+ED 
Sbjct: 471 KEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDG 530

Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
            +E  L+ HSE+LAI +GL+++ P + I + KNLRVC DCH+A K I+ +T R+++VRD 
Sbjct: 531 EKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDR 590

Query: 796 HRFHCFKNGVCSCGDYW 812
           +RFH F+NG CSCGDYW
Sbjct: 591 NRFHYFENGACSCGDYW 607



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 189/357 (52%), Gaps = 8/357 (2%)

Query: 54  KELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           K + ++LP+   +I++G         +L+    K +++  A+R+F+   +    LY  ++
Sbjct: 43  KHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 102

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+    +  DA+    RM +D + P  Y    +LK CG    +R G+E+H + +  G S
Sbjct: 103 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLS 162

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE----RDLVSWNTIVAGFAQNGFAELALDL 226
            +      ++ +Y KCG++ +A ++F+ MPE    +D V W  ++ GF +N     AL+ 
Sbjct: 163 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEA 222

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
              M  E  R +  TIV +L A + +G+L IG+ VH Y  +   +  + V  AL++MY++
Sbjct: 223 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 282

Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
           CG ++ A+ VFD MK R+V+++N+MI+     G   +A+ +F+ M+ + + PTNVT +  
Sbjct: 283 CGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGV 342

Query: 347 LHACADLGDLERGIFV-HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
           L+AC+  G ++ G  + H +     +   +     ++ +  +  +++ A D+   ++
Sbjct: 343 LNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 399



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 1/165 (0%)

Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
           S     +I  L     I     IHA +IR+   ++ F++  L+   +KC A+  A  +F 
Sbjct: 29  SLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ 88

Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
             +  +V  +  +IDG+ + G    A++L+++ML     P++      + AC     + E
Sbjct: 89  YTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALRE 148

Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           G    +   K  G+         +++L G+ G L +A    ++MP
Sbjct: 149 GREVHSRALK-LGLSSNRLVRLRIMELYGKCGELGDARRVFEEMP 192


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/663 (36%), Positives = 369/663 (55%), Gaps = 64/663 (9%)

Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPE 201
           LL  C     +   K+IH Q+I  G     FA++ ++   A    G +  A  +F+ + +
Sbjct: 38  LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94

Query: 202 RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAV 261
            +   WNT++ G + +     A+D   RM   G   +  T   +L + A VG+ + GK +
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 262 HGYAMRAGFDSIVNVSTALVDMYAKCGRV------------------------------- 290
           HG+ ++ G +S   V T+L++MYA+ G +                               
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           + AR +F+ +  R+ VSWN+MIA Y + G  EEA+  FQ+M    V P   T++  L AC
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A  G LE G +V   ++   LG+++ + N+LI MYSKC  +D+A D+F  +  K ++SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
            MI GY+      EAL  F KM+  N++P+  T VS++PA A L  +   KWIHA + + 
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 471 CFE-KNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
                N  + T+LIDMYAKCG +  A+ +F  M  + + +WN MI G   HG    A+EL
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 530 FNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
           F +M +   +P+DITF+  +SACSH+GLVE G   F+S+ +DY I P + HYG M+DLLG
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVL 649
           RAG  +EA   ++ M ++P   ++G++LGAC++H NVELGE AA  LFEL+P+  G +VL
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 650 LANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTF 709
           L+NIYA A  WD +A++RT +  KG++K                          + IY  
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKX-------------------------QDIYKM 609

Query: 710 LETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
           L+ +     +  G VPDT+ + +D+++  +E  LS HSEKLAIAFGL+++ P +TI I K
Sbjct: 610 LDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVK 669

Query: 768 NLR 770
           NLR
Sbjct: 670 NLR 672



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 281/549 (51%), Gaps = 58/549 (10%)

Query: 38  IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC---KYNSLSDAARV 94
           +  HPS  LL  C S + L++I   IIK+GL +     +KL+  FC    + +LS A  +
Sbjct: 30  LQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLL 88

Query: 95  FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
           FE I      +++TM++G +  +S   A+ F +RM    V P  Y + +LLK C  VG  
Sbjct: 89  FESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGAT 148

Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI------------------------- 189
           + GK+IHG ++  G   D F  T ++NMYA+ G++                         
Sbjct: 149 QEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGY 208

Query: 190 ------EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
                 ++A ++F+ +P RD VSWN ++AG+AQ+G  E AL     M       +  T+V
Sbjct: 209 TLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMV 268

Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
           ++L A A  GSL +G  V  +    G  S + +  AL+DMY+KCG ++ AR +F+G+  +
Sbjct: 269 TVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK 328

Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
           +++SWN MI  Y    + +EA+ +F+KM    VEP +VT +  L ACA LG L+ G ++H
Sbjct: 329 DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388

Query: 364 KLLDQLKLG-TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
             +D+  LG T+ S+  SLI MY+KC  ++ A  +F+ ++ K+L SWNAMI G A +G  
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448

Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNV--FVMT 480
           N AL  F +MR +  +PD  T V V+ A +   ++           R CF   V  + ++
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG--------RQCFSSMVEDYDIS 500

Query: 481 A-------LIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG---LGK-AAVE 528
                   +ID+  + G    A AL   M  +     W  ++     HG   LG+ AA  
Sbjct: 501 PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKH 560

Query: 529 LFNKMLEGP 537
           LF    E P
Sbjct: 561 LFELEPENP 569


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/556 (39%), Positives = 346/556 (62%), Gaps = 1/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G A H   +R G  +    S  L++MY+KCG VE+AR +FD M  R++VSWN+M+ ++ +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G+ E+A+ +F +M  +G   +  T+   + ACA    +     +H    +  L ++V +
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L+ +Y+KC  V  A  +F  +  ++ V+W++M+ GY QN    EAL  F + ++  +
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + + FT+ S + A A  + +   K + A+  ++    N+FV+++LIDMYAKCG +  A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  + E++V  WN ++ G+  H     A+  F KM +    PNDIT++  +SACSH GL
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VE+G  YF  + + + + P + HY  MVD+LGRAG L+EA DFI +MP +   +++G++L
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 425

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C+I++N+EL E AA  LFE++P   G HVLL+NIYAA   W+++A+ R ++++   +K
Sbjct: 426 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 485

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYV 736
             G S +E+K++VHSF  G   HP+   IY  LE L+ E+K  GY   T + +HDVE+  
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           ++ LL  HSEKLA+ FG++    G+ I I KNLR+CGDCH+  K  S +T REIIVRD +
Sbjct: 546 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 605

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH FKNG CSCG++W
Sbjct: 606 RFHHFKNGYCSCGEFW 621



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/347 (37%), Positives = 197/347 (56%), Gaps = 1/347 (0%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G   H Q+I  G   D      ++NMY+KCG +E A K+FD MP R LVSWNT+V    Q
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG  E AL L  +M +EG      T+ S++ A A    +   K +HG+A++   DS V V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TAL+D+YAKCG V+ A LVF+ M  R+ V+W+SM+A YV+    EEA+ +F +    G+
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           E    TI  AL ACA    L  G  V  +  +  +G+++ + +SLI MY+KC  ++ A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +FS ++ K +V WNA++ G++++ R  EA+ YF KM+   I P+  T +SV+ A + L +
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365

Query: 457 IRYAKWIHALVIR-SCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +   +    L+IR      NV   + ++D+  + G +  A+   D M
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 412



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 162/297 (54%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           II+ GL    +    L++++ K   +  A ++F+ +P +    ++TM+  + +    + A
Sbjct: 73  IIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKA 132

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +   ++M+ +  +   +  + ++  C     +   K++HG  +      ++F  T ++++
Sbjct: 133 LVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDV 192

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG +++A  +F+ MPER  V+W+++VAG+ QN   E AL L  R    G   +  TI
Sbjct: 193 YAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTI 252

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S L A A   +L  GK V   + + G  S + V ++L+DMYAKCG +E A  VF  ++ 
Sbjct: 253 SSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE 312

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +NVV WN++++ +       EAM  F+KM   G+ P ++T +  L AC+ LG +E+G
Sbjct: 313 KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 369



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 143/293 (48%), Gaps = 14/293 (4%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           E +++    +K+ L       T L+ ++ K   + DA  VFE +P++ D  + +M+ GY 
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 225

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +    ++A+    R +   +    +  +  L  C     +  GK++       G   ++F
Sbjct: 226 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIF 285

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            ++ +++MYAKCG IEEAY +F  + E+++V WN I++GF+++  +  A+    +M + G
Sbjct: 286 VISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 345

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS------TALVDMYAKCG 288
              + IT +S+L A +++G +  G+      +R     + NVS      + +VD+  + G
Sbjct: 346 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIR-----VHNVSPNVLHYSCMVDILGRAG 400

Query: 289 RVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +  A+   D M      S W S++A+     N E A    + + +  +EP N
Sbjct: 401 LLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFE--IEPHN 451


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/487 (43%), Positives = 312/487 (64%), Gaps = 5/487 (1%)

Query: 331 MLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
           ML++   P   T    L ACA +G+L  G  VH  + +   G +V++ N+L+ MY  C+ 
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60

Query: 391 ----VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
               ++ A  +F ++     VSW+AMI GY + GR ++A+N F +M+ K + PD  TMVS
Sbjct: 61  GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120

Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
           V+ A   L  +   KW+ + V +   +KNV +  ALIDM+AKCG V  A  LF  M ER+
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180

Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
           + +W  +I G   HG G  AV +F +M+     P+D+ F+  +SACSHSGLV++G  YF 
Sbjct: 181 IVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD 240

Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
           S++KD+ I P ++HYG MVD+L RAG + EA  F+Q+MPI+P   V+  ++ AC+ H  +
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGEL 300

Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
           +LGEK   +L   +P     +VLL+NIYA  S W+K  ++R  M+ KG++K PG +++EL
Sbjct: 301 KLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIEL 360

Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHS 745
            NE++ F +G   H QSK IY  ++ +  E+K AGY+P T  +  D++D  +E+ L+ HS
Sbjct: 361 DNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHS 420

Query: 746 EKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGV 805
           EKLAIAF LLN+ PG+ I I KNLRVC DCH+A+K+IS +  REI+VRD +RFH FKNG+
Sbjct: 421 EKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGL 480

Query: 806 CSCGDYW 812
           CSC D+W
Sbjct: 481 CSCRDFW 487



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 130/228 (57%), Gaps = 4/228 (1%)

Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC----GQIEE 191
           P  + Y ++LK C  +G +  GK +HG ++  GF  ++     +V+MY  C    G IE 
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A K+FD M + D VSW+ ++ G+ + G +  A++L   M  +G   D IT+VS+L A   
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           +G+L +GK V  Y  +      V +S AL+DM+AKCG V+ A  +F  M+ RN+VSW S+
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           I      G   EA+ +F++M+  GV P +V  +  L AC+  G +++G
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKG 235



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 160/349 (45%), Gaps = 17/349 (4%)

Query: 30  QRAYIPSRIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFC--- 83
           +R  +P++ + +P   +L+ C  +  L   + +   ++K G  D+   Q  LV ++C   
Sbjct: 3   ERKKLPNK-FTYP--FVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCR 59

Query: 84  -KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
                +  A +VF+ +       +  M+ GY +     DA++    M+   V P      
Sbjct: 60  GGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMV 119

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
            +L  C  +G +  GK +   +       ++     +++M+AKCG +++A  +F  M ER
Sbjct: 120 SVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRER 179

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVH 262
           ++VSW +++ G A +G    A+ +   M   G   D +  + +L A ++ G +  GK   
Sbjct: 180 NIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF 239

Query: 263 GYAMRAGFDSIVNVS--TALVDMYAKCGRVETA-RLVFDGMKSRNVVSWNSMIAAYVEGG 319
             +MR  F  +  +     +VDM  + G V+ A + V +     N V W ++I A    G
Sbjct: 240 D-SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298

Query: 320 NPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
             +   +I ++++ ++ +  +N  ++  ++  A + D E+   + + +D
Sbjct: 299 ELKLGEKITRQLIRNEPMHESNYVLLSNIY--AKMSDWEKKTRIREAMD 345


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/614 (37%), Positives = 349/614 (56%), Gaps = 7/614 (1%)

Query: 107 HTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIV 166
           H + +G+A+     +A+    +M+   + P    + ++LK C  +  +R  + IH  ++ 
Sbjct: 27  HLVNQGHAQ-----NALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLK 81

Query: 167 NGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDL 226
           + F  ++F  T  V+MY KCG++E+A+ +F  MP RD+ SWN ++ GFAQ+GF +    L
Sbjct: 82  SCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCL 141

Query: 227 VTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAK 286
           +  M   G R D +T++ ++ ++  V SL    AV+ + +R G    V+V+  L+  Y+K
Sbjct: 142 LRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSK 201

Query: 287 CGRVETARLVFDGMKS--RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
           CG + +A  +FD + S  R+VVSWNSMIAAY       +A+  ++ MLD G  P   TI+
Sbjct: 202 CGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTIL 261

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
             L +C     L  G+ VH    +L   +DV + N+LI MYSKC  V  A  +F+ +  K
Sbjct: 262 NLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDK 321

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           T VSW  MI  YA+ G ++EA+  F  M +   KPD  T++++I    +   +   KWI 
Sbjct: 322 TCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWID 381

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
              I +  + NV V  ALIDMYAKCG    A+ LF  M  R V +W  MI     +G  K
Sbjct: 382 NYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVK 441

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
            A+ELF  MLE   KPN ITFL  + AC+H GLVE G+  F  + + YGI P +DHY  M
Sbjct: 442 DALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCM 501

Query: 585 VDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           VDLLGR G L EA + I+ MP EP   ++ A+L ACK+H  +E+G+  + +LFEL+P   
Sbjct: 502 VDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVA 561

Query: 645 GYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSK 704
             +V +ANIYA+A MW+ +A +R  M+   ++K+PG S++++  +   F      HP++ 
Sbjct: 562 VPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETL 621

Query: 705 RIYTFLETLIDEIK 718
            IY  L+ L    K
Sbjct: 622 YIYDMLDGLTSRSK 635



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 219/426 (51%), Gaps = 4/426 (0%)

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           L +WN+        G A+ AL L  +M + G   +  T   +L A A +  LR  + +H 
Sbjct: 18  LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           + +++ F S + V TA VDMY KCGR+E A  VF  M  R++ SWN+M+  + + G  + 
Sbjct: 78  HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
              + + M   G+ P  VT++  + +   +  L     V+    ++ +  DVS+ N+LI+
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197

Query: 384 MYSKCKKVDRAADIFSKLQG--KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
            YSKC  +  A  +F ++    +++VSWN+MI  YA   +  +A+N +  M      PD 
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDI 257

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T+++++ +  +   + +   +H+  ++   + +V V+  LI MY+KCG V +AR LF+ 
Sbjct: 258 STILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNG 317

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M+++   +W VMI  Y   G    A+ LFN M     KP+ +T L  IS C  +G +E G
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
             +  +   + G++  +    A++D+  + G  N+A +    M     +  +  M+ AC 
Sbjct: 378 -KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMA-NRTVVSWTTMITACA 435

Query: 622 IHKNVE 627
           ++ +V+
Sbjct: 436 LNGDVK 441



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 2/319 (0%)

Query: 52  SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL--YHTM 109
           SL  L  +    I+ G+         L++ + K  +L  A  +F+ I   L ++  +++M
Sbjct: 169 SLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSM 228

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
           +  YA F     AV+    M     +P +     LL  C     +  G  +H   +  G 
Sbjct: 229 IAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGC 288

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
             D+  +  ++ MY+KCG +  A  +F+ M ++  VSW  +++ +A+ G+   A+ L   
Sbjct: 289 DSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNA 348

Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
           M   G + D +T+++++      G+L +GK +  Y++  G    V V  AL+DMYAKCG 
Sbjct: 349 MEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGG 408

Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
              A+ +F  M +R VVSW +MI A    G+ ++A+ +F  ML+ G++P ++T +  L A
Sbjct: 409 FNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQA 468

Query: 350 CADLGDLERGIFVHKLLDQ 368
           CA  G +ERG+    ++ Q
Sbjct: 469 CAHGGLVERGLECFNMMTQ 487



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%)

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
           TL +WN+        G    AL  F +M+   I P++ T   V+ A A+LS +R ++ IH
Sbjct: 17  TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIH 76

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
           A V++SCF+ N+FV TA +DMY KCG +  A  +F  M  R + +WN M+ G+   G   
Sbjct: 77  AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136

Query: 525 AAVELFNKMLEGPTKPNDITFLCAISA 551
               L   M     +P+ +T L  I +
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDS 163


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 396/742 (53%), Gaps = 67/742 (9%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           ++   +  ++  A   FE +P +  A Y+ +L GY +    D A+    RM   D+A   
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA--- 80

Query: 139 YNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +Y  L+        +RR    +    L    F   + + T ++  Y + G + +A ++F
Sbjct: 81  -SYNALISGLS----LRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLF 135

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
            +MPER+ VS+  ++ G    G    A  L   M +     D +   ++L      G  R
Sbjct: 136 QQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG--R 189

Query: 257 IGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           I +A      RA FD +    V   TA++  YA+ G V  AR +F+ M  RN VSW +M+
Sbjct: 190 ITEA------RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             Y++ G+ E+A  +F  M +  V   N  +         +G  +RG+            
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPVAACNAMM---------VGFGQRGM------------ 282

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                             VD A  +F K+  +   +W+AMI  Y QN  + EAL+ F +M
Sbjct: 283 ------------------VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             + ++P+  +++S++   A L+V+ Y + +HA ++R  F+ +VF ++ALI MY KCG +
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNL 384

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+ +F     + +  WN MI GY  HGLG+ A+ +F+ M      P+ IT++ A++AC
Sbjct: 385 DKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC 444

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           S++G V+EG   F S+  +  I P  +HY  MVDLLGR+G + EA+D I+ MP+EP   +
Sbjct: 445 SYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVI 504

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA++GAC++H+N E+ E AA +L EL+P   G +VLL++IY +   W+  +K+R  +  
Sbjct: 505 WGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISS 564

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
           + L K+PGCS +E    VH F SG    HP+   I   LE L   +  +GY  D + + H
Sbjct: 565 RNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLH 624

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           D+++  + + L  HSE+ A+A+GLL    G  I + KNLRVCGDCH+A K I+ +T REI
Sbjct: 625 DIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREI 684

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           I+RD +RFH FK+G CSC DYW
Sbjct: 685 ILRDANRFHHFKDGFCSCRDYW 706



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 21/466 (4%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +   +  L  +  +L DAA     IP     + + ++L+GY +   L DA+    +M   
Sbjct: 82  YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +      +YT LL    D G +   + +  ++       D+ A T +++ Y + G+I EA
Sbjct: 142 NHV----SYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITEA 193

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD MP+R++VSW  +++G+AQNG   LA  L   M E       ++  ++L     V
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE----VSWTAML-----V 244

Query: 253 GSLRIGKAVHGYAM-RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           G ++ G       +  A  +  V    A++  + + G V+ A+ VF+ M  R+  +W++M
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I AY +     EA+  F++ML +GV P   +++  L  CA L  L+ G  VH  + +   
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             DV   ++LI+MY KC  +D+A  +F   + K +V WN+MI GYAQ+G   +AL  F  
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCG 490
           MR   + PD  T +  + A +    ++  + I +++ + S         + ++D+  + G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            V  A  L  +M  E     W  ++     H   + A     K+LE
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLE 530



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 31/316 (9%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
            H+  T L+        +++A R+F+ +PD+    +  ML GY +   + +A +    M 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGK----------EIHGQLIVNGF--------SLD 172
             +V     ++T ++      GE+   +          E+    ++ G+        + +
Sbjct: 202 KRNVV----SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257

Query: 173 LF---------AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           LF         A   ++  + + G ++ A  +F++M ERD  +W+ ++  + QN F   A
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L     M   G R ++ +++SIL   A +  L  G+ VH   +R  FD  V   +AL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG ++ A+ VF   + +++V WNSMI  Y + G  E+A+ IF  M   G+ P  +T 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 344 MEALHACADLGDLERG 359
           + AL AC+  G ++ G
Sbjct: 438 IGALTACSYTGKVKEG 453


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/635 (36%), Positives = 359/635 (56%), Gaps = 37/635 (5%)

Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG 269
           I+  F Q    + A+D + R+ +   R       +++ A      L +GK VH +   + 
Sbjct: 38  IIELFCQQNRLKEAVDYLHRIPQPSPR----LYSTLIAACLRHRKLELGKRVHAHTKASN 93

Query: 270 FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQ 329
           F   + +S  L+ MYAKCG +  A+++FD +  +++ SWN+MI+ Y   G  E+A ++F 
Sbjct: 94  FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153

Query: 330 KMLDQGVEPTNVTI---------MEALHACADLGDLE----------------------- 357
           +M  +     N  I         MEAL     + + E                       
Sbjct: 154 EMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLR 213

Query: 358 RGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYA 417
           RG  +H  L +  L  D  +  +L+ +Y KC  ++ A  IF ++  K +VSW  MI    
Sbjct: 214 RGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCF 273

Query: 418 QNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVF 477
           ++GR  E  + F  +    ++P+ +T   V+ A A+L+  +  K +H  + R  ++   F
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSF 333

Query: 478 VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGP 537
             +AL+ +Y+KCG   TAR +F+ M    + +W  +I GY  +G    A++ F  +L   
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG 393

Query: 538 TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEA 597
           TKP++ITF+  +SAC+H+GLV+ G+ YF S+K+ +G+    DHY  ++DLL R+GR  EA
Sbjct: 394 TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEA 453

Query: 598 WDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAA 657
            + I  MP++P   ++ ++LG C+IH N+EL E+AA  LFEL+P+    ++ L+NIYA A
Sbjct: 454 ENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANA 513

Query: 658 SMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEI 717
            +W +  KVR  M+ +G+ K PG S +E+K +VH F  G T HP+   I+ +L  L  ++
Sbjct: 514 GLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKM 573

Query: 718 KAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCH 776
           K  GYV DTN + HDVE+  +E  +  HSEKLA+AFG++++SPG+ I + KNLR C DCH
Sbjct: 574 KEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCH 633

Query: 777 NATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDY 811
           NA KYIS +  R+IIVRD +RFHCF +G CSC DY
Sbjct: 634 NAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 245/503 (48%), Gaps = 28/503 (5%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
           +H    +++ LFC+ N L +A      IP     LY T++    +   L+         +
Sbjct: 31  EHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTK 90

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF-SLDLFAMTGVVNMYAKCGQI 189
             +  P +     L+ +    G +     +  Q++ +     DL +   +++ YA  G+I
Sbjct: 91  ASNFIPGIVISNRLIHMYAKCGSL-----VDAQMLFDEIPQKDLCSWNTMISGYANVGRI 145

Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE-EGRRGDFITIVSILPA 248
           E+A K+FD MP RD  SWN +++G+   G+   ALDL   M E E    +  T+ S L A
Sbjct: 146 EQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAA 205

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
            A + SLR GK +HGY +R+G +    V TAL+D+Y KCG +  AR +FD M  +++VSW
Sbjct: 206 AAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSW 265

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
            +MI    E G  +E   +F+ ++  GV P   T    L+ACADL   + G  VH  + +
Sbjct: 266 TTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR 325

Query: 369 LKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNY 428
           +         ++L+ +YSKC   + A  +F+++    LVSW ++I+GYAQNG+ + AL +
Sbjct: 326 VGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQF 385

Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTA-----L 482
           F  +     KPD  T V V+ A     ++    ++ H++      EK+  V TA     +
Sbjct: 386 FESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK-----EKHGLVHTADHYACV 440

Query: 483 IDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG----LGKAAVELFNKMLEGP 537
           ID+ A+ G    A  + D M  +     W  ++ G   HG      +AA  LF    E P
Sbjct: 441 IDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENP 500

Query: 538 TKPNDITFLCAISACSHSGLVEE 560
                 T++   +  +++GL  E
Sbjct: 501 A-----TYITLSNIYANAGLWTE 518


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/666 (35%), Positives = 372/666 (55%), Gaps = 5/666 (0%)

Query: 64   IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
            IK GL       + LVS++ K   +  AA+VFE + ++ D L++ M++GYA        +
Sbjct: 354  IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVM 413

Query: 124  SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
               + M+        + +T LL  C    ++  G + H  +I    + +LF    +V+MY
Sbjct: 414  ELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMY 473

Query: 184  AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
            AKCG +E+A ++F+ M +RD VSWNTI+ G+ Q+     A DL  RM+  G   D   + 
Sbjct: 474  AKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLA 533

Query: 244  SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
            S L A  NV  L  GK VH  +++ G D +++  ++L+DMY+KCG +E AR VF  M   
Sbjct: 534  STLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEW 593

Query: 304  NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
            +VVS N++IA Y +  N EEA+ +FQ+ML +GV P+ +T    + AC     L  G   H
Sbjct: 594  SVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFH 652

Query: 364  KLLDQLKLGTDVSMTN-SLISMYSKCKKVDRAADIFSKLQG-KTLVSWNAMILGYAQNGR 421
              + +    ++      SL+ +Y   +++  A  +FS+L   K++V W  M+ G++QNG 
Sbjct: 653  GQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGF 712

Query: 422  VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
              EAL ++ +MR     PD  T V+V+   + LS +R  + IH+L+     + +      
Sbjct: 713  YEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT 772

Query: 482  LIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
            LIDMYAKCG + ++  +FD M  R +V +WN +I+GY  +G  + A+++F+ M +    P
Sbjct: 773  LIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP 832

Query: 541  NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
            ++ITFL  ++ACSH+G V +G   F  +   YGIE  +DH   MVDLLGR G L EA DF
Sbjct: 833  DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892

Query: 601  IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
            I+   ++P   ++ ++LGAC+IH +   GE AA RL EL+P     +VLL+NIYA+   W
Sbjct: 893  IEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRW 952

Query: 661  DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            ++   +R  M  +G++K PG S +++    H F +G   H    +I  FLE L D +K  
Sbjct: 953  EEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLMKDD 1012

Query: 721  GYV-PD 725
              V PD
Sbjct: 1013 AVVNPD 1018



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 270/568 (47%), Gaps = 38/568 (6%)

Query: 51  TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           T+++  R+I   +IK GL         LV ++ K + L DA RVF+ I D     +  + 
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLF 233

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            GY K    ++AV    RMR +   P                                  
Sbjct: 234 SGYVKAGLPEEAVIVFERMRGEGHRP---------------------------------- 259

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
            D  A   V+N Y   G++++A  +F  MP  D+V+WN +++G  + G   +A++    M
Sbjct: 260 -DHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNM 318

Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
            +   +    T+ S+L A+  V +L +G  VH  A++ G  S + V ++LV MY+KC ++
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378

Query: 291 ETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
           E A  VF+ ++ RN V WN+MI  Y   G   + M +F  M   G    + T    L  C
Sbjct: 379 EAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           A   DLE G   H ++ + KL  ++ + N+L+ MY+KC  ++ A  IF  +  +  VSWN
Sbjct: 439 AVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWN 498

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS 470
            +I GY Q+   +EA + F +M S  I  D   + S + A   +  +   K +H L ++ 
Sbjct: 499 TIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKC 558

Query: 471 CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
             ++ +   ++LIDMY+KCG +  AR +F  M E  V + N +I GY  + L +A V LF
Sbjct: 559 GLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVV-LF 617

Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG-AMVDLLG 589
            +ML     P++ITF   + AC     +  G  +   + K +G     ++ G +++ L  
Sbjct: 618 QEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIK-WGFSSEGEYLGISLLGLYM 676

Query: 590 RAGRLNEAWDFIQKMPIEPGITVFGAML 617
            + R+ EA     ++     I ++  M+
Sbjct: 677 NSRRMAEACALFSELSSPKSIVLWTGMM 704



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 282/613 (46%), Gaps = 28/613 (4%)

Query: 72  HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
           HL    +++ +     L DA  +F  +P      ++ M+ G+ K      A+ + + MR 
Sbjct: 261 HLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRK 320

Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEE 191
             V         +L   G V  +  G  +H + I  G + +++  + +V+MY+KC ++E 
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A K+F+ + ER+ V WN ++ G+A NG +   ++L   M   G   D  T  S+L   A 
Sbjct: 381 AAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAV 440

Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
              L +G   H   ++      + V  ALVDMYAKCG +E AR +F+ M  R+ VSWN++
Sbjct: 441 SHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTI 500

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I  YV+  N  EA  +F +M   G+      +   L AC ++  L +G  VH L  +  L
Sbjct: 501 IGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGL 560

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
              +   +SLI MYSKC  ++ A  +FS +   ++VS NA+I GY+QN  + EA+  F +
Sbjct: 561 DRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQE 619

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCG 490
           M +K + P   T  +++ A  +   +      H  +I+  F  +  ++  +L+ +Y    
Sbjct: 620 MLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSR 679

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
            +  A ALF ++ + + +  W  M+ G+  +G  + A++ + +M      P+  TF+  +
Sbjct: 680 RMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVL 739

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG---------AMVDLLGRAGRLNEAWDF 600
             CS            +SL++   I  ++ H            ++D+  + G +  +   
Sbjct: 740 RVCS----------VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQV 789

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAAN--RLFELDPDEGGYHVLLANIYAAAS 658
             +M     +  + +++     +   E   K  +  R   + PDE    +    +  A S
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDE----ITFLGVLTACS 845

Query: 659 MWDKLAKVRTIME 671
              K++  R I E
Sbjct: 846 HAGKVSDGRKIFE 858



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 256/529 (48%), Gaps = 39/529 (7%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           +V L+ K   +S A + F  +   + A +++ML  Y+        +   + +  + + P 
Sbjct: 101 IVDLYAKCAQVSYAEKQFNSLEKDVTA-WNSMLSMYSSIGQPGKVLRSFVSLFENLIFPN 159

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
            + ++ +L        +  G++IH  +I  G   + +    +V+MYAKC ++ +A ++FD
Sbjct: 160 KFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFD 219

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            + + + V W  + +G+ + G  E A+ +  RM  EG R D +  V++            
Sbjct: 220 GIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV------------ 267

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
                                  ++ Y   G+++ ARL+F  M S +VV+WN MI+ + +
Sbjct: 268 -----------------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGK 304

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G    A+  F  M    V+ T  T+   L A   + +L+ G+ VH    +L L +++ +
Sbjct: 305 RGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
            +SL+SMYSKC+K++ AA +F  L+ +  V WNAMI GYA NG  ++ +  F  M+S   
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGY 424

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
             D FT  S++   A    +      H+++I+    KN+FV  AL+DMYAKCGA+  AR 
Sbjct: 425 NIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQ 484

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH-SG 556
           +F+ M +R   +WN +I GY        A +LF +M       +       + AC++  G
Sbjct: 485 IFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHG 544

Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
           L +    +  S+K   G++ V+    +++D+  + G + +A      MP
Sbjct: 545 LYQGKQVHCLSVK--CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 215/451 (47%), Gaps = 37/451 (8%)

Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
           +R GK +H + ++ G   +      +V++YAKC Q+  A K F+ + E+D+ +WN++++ 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSM 134

Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
           ++  G     L     + E     +  T   +L   A   ++  G+ +H   ++ G +  
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 274 VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
                ALVDMYAKC R+  A+ VFDG+   N V W  + + YV+ G PEEA+ +F++M  
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 334 QGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDR 393
           +G  P ++                                 V++ N+ IS+     K+  
Sbjct: 255 EGHRPDHLAF-------------------------------VTVINTYISL----GKLKD 279

Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
           A  +F ++    +V+WN MI G+ + G    A+ YF  MR  ++K    T+ SV+ A+  
Sbjct: 280 ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGI 339

Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
           ++ +     +HA  I+     N++V ++L+ MY+KC  +  A  +F+ + ER+   WN M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAM 399

Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
           I GY  +G     +ELF  M       +D TF   +S C+ S  +E G  + + + K   
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKL 459

Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
            + +     A+VD+  + G L +A    + M
Sbjct: 460 TKNLFVG-NALVDMYAKCGALEDARQIFEHM 489



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 196/419 (46%), Gaps = 40/419 (9%)

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           L  G  VH     L + ++  + N+++ +Y+KC +V  A   F+ L+ K + +WN+M+  
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y+  G+  + L  F  +    I P+ FT   V+   A  + + + + IH  +I+   E+N
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            +   AL+DMYAKC  +G A+ +FD + + +   W  +  GY   GL + AV +F +M  
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
              +P+ + F+  I+     G +++    F  +       P +  +  M+   G+ G   
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCEI 309

Query: 596 EAWDF---IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLAN 652
            A ++   ++K  ++   +  G++L A  I  N++LG        +L         L +N
Sbjct: 310 VAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LASN 361

Query: 653 IYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV--HSFYSGSTKHPQSKRIYTFL 710
           IY  +S+    +K   +     + +      +E +N+V  ++   G   + +S ++   +
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEA-----LEERNDVLWNAMIRGYAHNGESHKV---M 413

Query: 711 ETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
           E  +D +K++GY        +++D+   +LLS+     A++  L   S   +I I+K L
Sbjct: 414 ELFMD-MKSSGY--------NIDDFTFTSLLST----CAVSHDLEMGSQFHSIIIKKKL 459


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 347/572 (60%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  +++ A   + S+R  K V  Y + +GF+  + V   ++ M+ KCG +  AR +FD M
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             ++V SW +M+   V+ GN  EA R+F  M  +  +  + T    + A A LG ++ G 
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H    +  +G D  ++ +LI MYSKC  ++ A  +F ++  KT V WN++I  YA +G
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              EAL+ + +MR      D FT+  VI   A L+ + +AK  HA ++R  F  ++   T
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+D Y+K G +  AR +F+ M  ++V +WN +I GYG HG G+ AVE+F +ML+    P
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTP 419

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
             +TFL  +SACS+SGL + G   F S+K+D+ ++P   HY  M++LLGR   L+EA+  
Sbjct: 420 THVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYAL 479

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+  P +P   ++ A+L AC++HKN+ELG+ AA +L+ ++P++   +++L N+Y ++   
Sbjct: 480 IRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKL 539

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            + A +   ++KKGL+  P CS VE+K + ++F  G   H Q+K IY  ++ L+ EI   
Sbjct: 540 KEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKH 599

Query: 721 GYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           GY  +  ++    D  ++ +L  HSEKLAIAFGL+N+   + + I +  RVCGDCH+A K
Sbjct: 600 GYAEENETLLPDVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIK 659

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
            I++VTGREI+VRD  RFH F+NG CSCGDYW
Sbjct: 660 LIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 227/482 (47%), Gaps = 41/482 (8%)

Query: 126 LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK 185
           ++ + +D        Y  L+  C  +  IR  K +   +I +GF  DL+ M  V+ M+ K
Sbjct: 106 ILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVK 165

Query: 186 CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSI 245
           CG + +A K+FD MPE+D+ SW T+V G    G    A  L   M +E   G   T  ++
Sbjct: 166 CGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATM 225

Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
           + A A +G +++GK +H  A++ G      VS AL+DMY+KCG +E A  VFD M  +  
Sbjct: 226 IRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTT 285

Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
           V WNS+IA+Y   G  EEA+ ++ +M D G    + TI   +  CA L  LE     H  
Sbjct: 286 VGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAA 345

Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
           L +    TD+    +L+  YSK  +++ A  +F++++ K ++SWNA+I GY  +G+  EA
Sbjct: 346 LVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEA 405

Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
           +  F +M  + + P   T ++V+ A +  S +    W                       
Sbjct: 406 VEMFEQMLQEGVTPTHVTFLAVLSACS-YSGLSQRGW----------------------- 441

Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV--ELFNKMLEGPTKPNDI 543
                       +F  M   H      M        LG+ ++  E +  +   P KP   
Sbjct: 442 -----------EIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTAN 490

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP-VMDHYGAMVDLLGRAGRLNEAWDFIQ 602
            +   ++AC     +E G     + +K YG+EP  + +Y  +++L   +G+L EA   +Q
Sbjct: 491 MWAALLTACRMHKNLELGK---LAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQ 547

Query: 603 KM 604
            +
Sbjct: 548 TL 549



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 177/317 (55%), Gaps = 3/317 (0%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C  L+ +R   R+   +I SG         +++ +  K   + DA ++F+ +P+K 
Sbjct: 124 LVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKD 183

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            A + TM+ G     +  +A    + M  +        +  +++    +G ++ GK+IH 
Sbjct: 184 VASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHS 243

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G   D F    +++MY+KCG IE+A+ +FD+MPE+  V WN+I+A +A +G++E 
Sbjct: 244 CALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEE 303

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL L   M + G   D  TI  ++   A + SL   K  H   +R GF + +  +TALVD
Sbjct: 304 ALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVD 363

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y+K GR+E AR VF+ M+ +NV+SWN++IA Y   G  +EA+ +F++ML +GV PT+VT
Sbjct: 364 FYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVT 423

Query: 343 IMEALHACADLGDLERG 359
            +  L AC+  G  +RG
Sbjct: 424 FLAVLSACSYSGLSQRG 440



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++++ +C    SL+  ++    +++ G     +  T LV  + K+  + DA  VF  +  
Sbjct: 324 SIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRH 383

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    ++ ++ GY       +AV    +M  + V P    +  +L  C   G  +RG EI
Sbjct: 384 KNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEI 443


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 396/742 (53%), Gaps = 67/742 (9%)

Query: 79  VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
           ++   +  ++  A   FE +P +  A Y+ +L GY +    D A+    RM   D+A   
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA--- 80

Query: 139 YNYTYLLKVCGDVGEIRRG--KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
            +Y  L+        +RR    +    L    F   + + T ++  Y + G + +A ++F
Sbjct: 81  -SYNALISGL----SLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLF 135

Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
            +MPER+ VS+  ++ G    G    A  L   M +     D +   ++L      G  R
Sbjct: 136 QQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG--R 189

Query: 257 IGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
           I +A      RA FD +    V   TA++  YA+ G V  AR +F+ M  RN VSW +M+
Sbjct: 190 ITEA------RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
             Y++ G+ E+A  +F  M +  V   N  +         +G  +RG+            
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPVAACNAMM---------VGFGQRGM------------ 282

Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
                             VD A  +F K+  +   +W+AMI  Y QN  + EAL+ F +M
Sbjct: 283 ------------------VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 433 RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
             + ++P+  +++S++   A L+V+ Y + +HA ++R  F+ +VF ++ALI MY KCG +
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNL 384

Query: 493 GTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISAC 552
             A+ +F     + +  WN MI GY  HGLG+ A+ +F+ M      P+ IT++ A++AC
Sbjct: 385 DKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC 444

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITV 612
           S++G V+EG   F S+  +  I P  +HY  MVDLLGR+G + EA+D I+ MP+EP   +
Sbjct: 445 SYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVI 504

Query: 613 FGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
           +GA++GAC++H+N E+ E AA +L EL+P   G +VLL++IY +   W+  +K+R  +  
Sbjct: 505 WGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISS 564

Query: 673 KGLQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
           + L K+PGCS +E    VH F SG    HP+   I   LE L   +  +GY  D + + H
Sbjct: 565 RNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLH 624

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           D+++  + + L  HSE+ A+A+GLL    G  I + KNLRVCGDCH+A K I+ +T REI
Sbjct: 625 DIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREI 684

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           I+RD +RFH FK+G CSC DYW
Sbjct: 685 ILRDANRFHHFKDGFCSCRDYW 706



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 21/466 (4%)

Query: 74  FQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYD 132
           +   +  L  +  +L DAA     IP     + + ++L+GY +   L DA+    +M   
Sbjct: 82  YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
           +      +YT LL    D G +   + +  ++       D+ A T +++ Y + G+I EA
Sbjct: 142 NHV----SYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITEA 193

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
             +FD MP+R++VSW  +++G+AQNG   LA  L   M E       ++  ++L     V
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE----VSWTAML-----V 244

Query: 253 GSLRIGKAVHGYAM-RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
           G ++ G       +  A  +  V    A++  + + G V+ A+ VF+ M  R+  +W++M
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304

Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
           I AY +     EA+  F++ML +GV P   +++  L  CA L  L+ G  VH  + +   
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364

Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
             DV   ++LI+MY KC  +D+A  +F   + K +V WN+MI GYAQ+G   +AL  F  
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424

Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCG 490
           MR   + PD  T +  + A +    ++  + I +++ + S         + ++D+  + G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 491 AVGTARALF-DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            V  A  L  +M  E     W  ++     H   + A     K+LE
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLE 530



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 31/316 (9%)

Query: 71  QHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR 130
            H+  T L+        +++A R+F+ +PD+    +  ML GY +   + +A +    M 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGK----------EIHGQLIVNGF--------SLD 172
             +V     ++T ++      GE+   +          E+    ++ G+        + +
Sbjct: 202 KRNVV----SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257

Query: 173 LF---------AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           LF         A   ++  + + G ++ A  +F++M ERD  +W+ ++  + QN F   A
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
           L     M   G R ++ +++SIL   A +  L  G+ VH   +R  FD  V   +AL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y KCG ++ A+ VF   + +++V WNSMI  Y + G  E+A+ IF  M   G+ P  +T 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 344 MEALHACADLGDLERG 359
           + AL AC+  G ++ G
Sbjct: 438 IGALTACSYTGKVKEG 453


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/696 (35%), Positives = 399/696 (57%), Gaps = 17/696 (2%)

Query: 78  LVSLFCKYNSLSDAARVFEPIP--DKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
           L+SL+ K   L+ A  VFE +    K D + +  M+  +       DA+   +      +
Sbjct: 103 LISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGL 162

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKC-GQIEEA 192
            P  Y YT +++ C +   +  G+ I G L+  G F  D+     +++M+ K     E A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
           YK+FD+M E ++V+W  ++    Q GF   A+     M   G   D  T+ S+  A A +
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNVVSWN 309
            +L +G+ +H +A+R+G     +V  +LVDMYAKC   G V+  R VFD M+  +V+SW 
Sbjct: 283 ENLSLGRQLHSWAIRSGLAD--DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340

Query: 310 SMIAAYVEGGN-PEEAMRIFQKMLDQG-VEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
           ++I  Y++  N   EA+ +F +M+ QG VEP + T   A  AC ++ D   G  V     
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALN 427
           +  L ++ S++NS+ISM+ KC +++ A   F  L  K LVS+N  + G  +N     A  
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFE 460

Query: 428 YFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYA 487
              ++  + +   +FT  S++  +A +  +R  + IH+ V++     N  V  ALI MY+
Sbjct: 461 LLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYS 520

Query: 488 KCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
           KCG++ TA  +F +M+ R+V +W  MI G+  HG  +  +E FN+M +   KPN++T++ 
Sbjct: 521 KCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVA 580

Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
            +SACSH GLV EG  +F S+ +D+ I+P M+HY  MVDLL RAG L +A++FI  MP +
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 608 PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVR 667
             + V+   LGAC++H N ELG+ AA ++ E DP+E   ++ L+NIYA+A  W++  ++R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMR 700

Query: 668 TIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN 727
             M+++ L K  GCS +E+ ++VH FY G T HP + +IY  L+ LI EIK  GYVPDT+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTD 760

Query: 728 SI-HDVEDYVQEN----LLSSHSEKLAIAFGLLNSS 758
            + H +E+   E     LL  HSEK+A+AFGL++++
Sbjct: 761 LVLHKLEEEDDEAKKEMLLYQHSEKIAVAFGLISTA 796



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 242/490 (49%), Gaps = 14/490 (2%)

Query: 119 LDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
           L  AVS L  M  D + P+    ++ LLK C      R GK +H +LI      D     
Sbjct: 42  LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYN 101

Query: 178 GVVNMYAKCGQIEEAYKMFD---RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            ++++Y+K G + +A  +F+   R  +RD+VSW+ ++A F  NG    A+ L     E G
Sbjct: 102 SLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMG 161

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKC-GRVET 292
              +     +++ A +N   + +G+ + G+ M+ G F+S V V  +L+DM+ K     E 
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           A  VFD M   NVV+W  MI   ++ G P EA+R F  M+  G E    T+     ACA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281

Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK---KVDRAADIFSKLQGKTLVSW 409
           L +L  G  +H    +  L  DV    SL+ MY+KC     VD    +F ++Q  +++SW
Sbjct: 282 LENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSW 339

Query: 410 NAMILGYAQNGRV-NEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
            A+I GY QN  +  EA+N F +M ++ +++P+ FT  S   A   +S  R  K +    
Sbjct: 340 TALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHA 399

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
            +     N  V  ++I M+ KC  +  AR  F+ ++E+++ ++N  +DG   +   + A 
Sbjct: 400 FKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAF 459

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
           EL +++ E     +  TF   +S  ++ G + +G    + + K  G+        A++ +
Sbjct: 460 ELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLK-LGLSCNQPVCNALISM 518

Query: 588 LGRAGRLNEA 597
             + G ++ A
Sbjct: 519 YSKCGSIDTA 528



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 111/202 (54%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           +++L    K GL         ++S+F K + + DA   FE + +K    Y+T L G  + 
Sbjct: 393 KQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRN 452

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              + A   L  +   ++    + +  LL    +VG +R+G++IH Q++  G S +    
Sbjct: 453 LDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVC 512

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
             +++MY+KCG I+ A ++F  M  R+++SW +++ GFA++GFAE  L+   +M +EG +
Sbjct: 513 NALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVK 572

Query: 237 GDFITIVSILPAVANVGSLRIG 258
            + +T V+IL A ++VG +  G
Sbjct: 573 PNEVTYVAILSACSHVGLVSEG 594



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 6/252 (2%)

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGIFVHKLLD 367
           + +I  ++  G+   A+     M   G+ P + VT    L +C        G  VH  L 
Sbjct: 30  DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLI 89

Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFS---KLQGKTLVSWNAMILGYAQNGRVNE 424
           + ++  D  + NSLIS+YSK   + +A D+F    +   + +VSW+AM+  +  NGR  +
Sbjct: 90  EFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFD 149

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
           A+  F +     + P+ +   +VI A +    +   + I   ++++  FE +V V  +LI
Sbjct: 150 AIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLI 209

Query: 484 DMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
           DM+ K   +   A  +FD M+E +V TW +MI      G  + A+  F  M+    + + 
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269

Query: 543 ITFLCAISACSH 554
            T     SAC+ 
Sbjct: 270 FTLSSVFSACAE 281



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 4/165 (2%)

Query: 52  SLKELRRILPLIIKSGL-CDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           SL++  +I   ++K GL C+Q +    L+S++ K  S+  A+RVF  + ++    + +M+
Sbjct: 489 SLRKGEQIHSQVLKLGLSCNQPVCNA-LISMYSKCGSIDTASRVFSLMDNRNVISWTSMI 547

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG-KEIHGQLIVNGF 169
            G+AK    +  +    +M  + V P    Y  +L  C  VG +  G +  +     +  
Sbjct: 548 TGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607

Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
              +     +V++  + G + +A++  + MP + D++ W T +  
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/646 (38%), Positives = 368/646 (56%), Gaps = 56/646 (8%)

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F +  ++    + G I+ A ++F  M  ++ ++WN+++ G +++          +RM E
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDP---------SRMME 111

Query: 233 EGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
             +  D I    T    +     V ++   KA   +  R  F    + +T ++  YA+ G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKA-QSFFDRMPFKDAASWNT-MITGYARRG 169

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            +E AR +F  M  +N VSWN+MI+ Y+E G+ E+A   F+      V P          
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFK------VAPV--------- 214

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLV 407
                    RG+              V+ T ++I+ Y K KKV+ A  +F  +   K LV
Sbjct: 215 ---------RGV--------------VAWT-AMITGYMKAKKVELAEAMFKDMTVNKNLV 250

Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
           +WNAMI GY +N R  + L  F  M  + I+P+S  + S +   +ELS ++  + IH +V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
            +S    +V  +T+LI MY KCG +G A  LF++M ++ V  WN MI GY  HG    A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370

Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
            LF +M++   +P+ ITF+  + AC+H+GLV  G+ YF S+ +DY +EP  DHY  MVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430

Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
           LGRAG+L EA   I+ MP  P   VFG +LGAC++HKNVEL E AA +L +L+      +
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490

Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
           V LANIYA+ + W+ +A+VR  M++  + K PG S +E++N+VH F S    HP+   I+
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550

Query: 708 TFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
             L+ L  ++K AGY P+   ++H+VE+  +E LL  HSEKLA+AFG +    GS I + 
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610

Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           KNLR+CGDCH A K+IS +  REIIVRD  RFH FK+G CSCGDYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 186/352 (52%), Gaps = 11/352 (3%)

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
           D F+   +++ Y +    E+A   FDRMP +D  SWNT++ G+A+ G  E A +L   M 
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182

Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
           E+      ++  +++      G L   KA H + + A    +V   TA++  Y K  +VE
Sbjct: 183 EKNE----VSWNAMISGYIECGDLE--KASHFFKV-APVRGVV-AWTAMITGYMKAKKVE 234

Query: 292 TARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
            A  +F  M  ++N+V+WN+MI+ YVE   PE+ +++F+ ML++G+ P +  +  AL  C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294

Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
           ++L  L+ G  +H+++ +  L  DV+   SLISMY KC ++  A  +F  ++ K +V+WN
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354

Query: 411 AMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIR 469
           AMI GYAQ+G  ++AL  F +M    I+PD  T V+V+ A     ++     +  ++V  
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414

Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH 520
              E      T ++D+  + G +  A  L   M  R H   +  ++     H
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 162/320 (50%), Gaps = 12/320 (3%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDVAP 136
           ++S + +  +   A   F+ +P K  A ++TM+ GYA+   ++ A   F   M  ++V+ 
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVS- 188

Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
               +  ++    + G++ +         V G    + A T ++  Y K  ++E A  MF
Sbjct: 189 ----WNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMF 240

Query: 197 DRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
             M   ++LV+WN +++G+ +N   E  L L   M EEG R +   + S L   + + +L
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300

Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
           ++G+ +H    ++   + V   T+L+ MY KCG +  A  +F+ MK ++VV+WN+MI+ Y
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360

Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTD 374
            + GN ++A+ +F++M+D  + P  +T +  L AC   G +  G+ +   ++   K+   
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420

Query: 375 VSMTNSLISMYSKCKKVDRA 394
                 ++ +  +  K++ A
Sbjct: 421 PDHYTCMVDLLGRAGKLEEA 440



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 8/165 (4%)

Query: 43  SALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP 99
           SALL   C+ L  L   R+I  ++ KS LC+     T L+S++CK   L DA ++FE + 
Sbjct: 289 SALL--GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346

Query: 100 DKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
            K    ++ M+ GYA+  + D A+     M  + + P    +  +L  C   G +  G  
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406

Query: 160 IHGQLIVNGFSLDLFA--MTGVVNMYAKCGQIEEAYKMFDRMPER 202
            + + +V  + ++      T +V++  + G++EEA K+   MP R
Sbjct: 407 -YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/597 (38%), Positives = 342/597 (57%), Gaps = 36/597 (6%)

Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
           +A   + R    +H   +R G DS   V+  L   YA  GR++ +  +    K    + +
Sbjct: 31  LAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFY 90

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
            S I A+   G     + +   ML +G+ PT  T+  +L AC  L     G  +H    +
Sbjct: 91  TSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGL---SLGRALHAYAFK 147

Query: 369 LKLGTDVSMTNSLISMY-------------------------------SKCKKVDRAADI 397
           L L  D  +  +L+SMY                               +    +D A  +
Sbjct: 148 LALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRL 207

Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
           F  L  K  + WNAMI GY Q+G+ NEAL  F +M   + +PD  T+V V+ A+A+L  +
Sbjct: 208 FDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTV 267

Query: 458 RYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDG 516
              KW+H+ V  S C + NV V TAL+DMY KCG++  A A+F  +  + +  WN MI+G
Sbjct: 268 ESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMING 327

Query: 517 YGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
           Y  HG  + A+E+F ++ +    P DITF+  ++ACSHSGLVEEG  +F S++ +YGI+P
Sbjct: 328 YAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDP 387

Query: 577 VMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
            ++HYG MVDLLGRAG + EA+  +Q + I P   ++ ++L AC++HKN+ LG++ A+ L
Sbjct: 388 KIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFL 447

Query: 637 FELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSG 696
                   G ++LL+NIYAA   W+++A+VR++M+  G+QK PGCS +E+  +V+ F +G
Sbjct: 448 VANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAG 507

Query: 697 STKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLL 755
              HP +  IY  L+ +   +K  G+VP T  + HD+++  +E  L+ HSEKLA+AFGL+
Sbjct: 508 DMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLI 567

Query: 756 NSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +S PGSTI I KNLR C DCH   K IS +T R+I+ RD +RFH F +G C+CGDYW
Sbjct: 568 SSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 160/349 (45%), Gaps = 35/349 (10%)

Query: 43  SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           +A LL  C++ +    +   +++ GL        +L   +     L  +  +     D  
Sbjct: 27  AASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPT 86

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
              Y + +  ++        ++ L  M  + + P  +  +  L  C     +  G+ +H 
Sbjct: 87  TIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRG---LSLGRALHA 143

Query: 163 QLIVNGFSLDLFAMTGVVNMY-------------------------------AKCGQIEE 191
                  S D +  T +++MY                               A  G +++
Sbjct: 144 YAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDD 203

Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
           A ++FD +P +D + WN ++ G+ Q+G    AL L  RM       D +T+V +L AVA 
Sbjct: 204 ARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQ 263

Query: 252 VGSLRIGKAVHGYAMRAGFDSI-VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
           +G++  GK +H Y   +    + V V+TALVDMY KCG +E A  VF G+ ++++V WN+
Sbjct: 264 LGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNA 323

Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           MI  Y   G+  +A+ +F ++ DQG+ PT++T +  L+AC+  G +E G
Sbjct: 324 MINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEG 372



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 14/284 (4%)

Query: 70  DQHLFQ-TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIR 128
           D H+   T +++ +    +L DA R+F+ +P K    ++ M+ GY +    ++A+    R
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241

Query: 129 MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG--FSLDLFAMTGVVNMYAKC 186
           M      P       +L     +G +  GK +H   + N     L++   T +V+MY KC
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLH-SYVKNSRCVQLNVRVATALVDMYCKC 300

Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
           G +E+A  +F  +  +D+V WN ++ G+A +G +  AL++  ++ ++G     IT + +L
Sbjct: 301 GSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLL 360

Query: 247 PAVANVGSLRIGKAV-----HGYAMRAGFDSIVNVSTALVDMYAKCGRVETA-RLVFDGM 300
            A ++ G +  G++      H Y    G D  +     +VD+  + G +E A  LV    
Sbjct: 361 NACSHSGLVEEGRSFFQSMEHEY----GIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLT 416

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
            + + V W S++AA     N     RI   ++  G+  + + I+
Sbjct: 417 ITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYIL 460


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/572 (37%), Positives = 350/572 (61%)

Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
           T  +++ A   + S+R  K V  Y + +GF+  + V   ++ ++ KCG +  AR +FD M
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178

Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
             +++ SW +MI  +V+ GN  EA  +F  M ++  +  + T    + A A LG ++ G 
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238

Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
            +H    +  +G D  ++ +LI MYSKC  ++ A  +F ++  KT V WN++I  YA +G
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298

Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
              EAL+++ +MR    K D FT+  VI   A L+ + YAK  HA ++R  ++ ++   T
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358

Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
           AL+D Y+K G +  A  +F+ M  ++V +WN +I GYG HG G+ AVE+F +ML     P
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIP 418

Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
           N +TFL  +SACS+SGL E G   F S+ +D+ ++P   HY  MV+LLGR G L+EA++ 
Sbjct: 419 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYEL 478

Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
           I+  P +P   ++  +L AC++H+N+ELG+ AA  L+ ++P++   +++L N+Y ++   
Sbjct: 479 IRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKL 538

Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
            + A V   +++KGL+  P C+ +E+K + ++F  G   H Q+K IY  +  ++ EI   
Sbjct: 539 KEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRH 598

Query: 721 GYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
           GYV +  ++    D  ++ +L  HSEKLAIAFGL+N+   + + I +  RVCGDCH+A K
Sbjct: 599 GYVEENKALLPDVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIK 658

Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           +I++VTGREI+VRD  RFH F++G CSCGDYW
Sbjct: 659 FIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 226/471 (47%), Gaps = 47/471 (9%)

Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
            Y  L+  C  +  IR  K +   ++ +GF  DL+ M  V+ ++ KCG + +A K+FD M
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178

Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
           PE+D+ SW T++ GF  +G    A  L   M EE   G   T  +++ A A +G +++G+
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238

Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
            +H  A++ G      VS AL+DMY+KCG +E A  VFD M  +  V WNS+IA+Y   G
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298

Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
             EEA+  + +M D G +  + TI   +  CA L  LE     H  L +    TD+    
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358

Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
           +L+  YSK  +++ A  +F++++ K ++SWNA+I GY  +G+  EA+  F +M  + + P
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIP 418

Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
           +  T ++V+ A +  S +    W                                   +F
Sbjct: 419 NHVTFLAVLSACS-YSGLSERGW----------------------------------EIF 443

Query: 500 DMMNERH-----VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
             M+  H        +  M++  G  GL   A EL       P KP    +   ++AC  
Sbjct: 444 YSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRS---APFKPTTNMWATLLTACRM 500

Query: 555 SGLVEEGIHYFTSLKKDYGIEP-VMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
              +E G     +L   YG+EP  + +Y  +++L   +G+L EA   +Q +
Sbjct: 501 HENLELGKLAAENL---YGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTL 548



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 178/317 (56%), Gaps = 3/317 (0%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           L+  C  L+ +R   R+   ++ SG         +++ +  K   + DA ++F+ +P+K 
Sbjct: 123 LVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKD 182

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
            A + TM+ G+    +  +A    + M  +        +T +++    +G ++ G++IH 
Sbjct: 183 MASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHS 242

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
             +  G   D F    +++MY+KCG IE+A+ +FD+MPE+  V WN+I+A +A +G++E 
Sbjct: 243 CALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEE 302

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
           AL     M + G + D  TI  ++   A + SL   K  H   +R G+D+ +  +TALVD
Sbjct: 303 ALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVD 362

Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            Y+K GR+E A  VF+ M+ +NV+SWN++IA Y   G  EEA+ +F++ML +G+ P +VT
Sbjct: 363 FYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVT 422

Query: 343 IMEALHACADLGDLERG 359
            +  L AC+  G  ERG
Sbjct: 423 FLAVLSACSYSGLSERG 439


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/556 (39%), Positives = 346/556 (62%), Gaps = 1/556 (0%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
           G A H   +R G  +    S  L++MY+KCG VE+AR +FD M  R++VSWN+M+ ++ +
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
            G+ E+A+ +F +M  +G   +  T+   + ACA    +     +H    +  L ++V +
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
             +L+ +Y+KC  V  A  +F  +  ++ V+W++M+ GY QN    EAL  F + ++  +
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
           + + FT+ S + A A  + +   K + A+  ++    N+FV+++LIDMYAKCG +  A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
           +F  + E++V  WN ++ G+  H     A+  F KM +    PNDIT++  +SACSH GL
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
           VE+G  YF  + + + + P + HY  MVD+LGRAG L+EA DFI +MP +   +++G++L
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 398

Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
            +C+I++N+EL E AA  LFE++P   G HVLL+NIYAA   W+++A+ R ++++   +K
Sbjct: 399 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 458

Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYV 736
             G S +E+K++VHSF  G   HP+   IY  LE L+ E+K  GY   T + +HDVE+  
Sbjct: 459 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 518

Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
           ++ LL  HSEKLA+ FG++    G+ I I KNLR+CGDCH+  K  S +T REIIVRD +
Sbjct: 519 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 578

Query: 797 RFHCFKNGVCSCGDYW 812
           RFH FKNG CSCG++W
Sbjct: 579 RFHHFKNGYCSCGEFW 594



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/347 (37%), Positives = 197/347 (56%), Gaps = 1/347 (0%)

Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
           G   H Q+I  G   D      ++NMY+KCG +E A K+FD MP R LVSWNT+V    Q
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
           NG  E AL L  +M +EG      T+ S++ A A    +   K +HG+A++   DS V V
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
            TAL+D+YAKCG V+ A LVF+ M  R+ V+W+SM+A YV+    EEA+ +F +    G+
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
           E    TI  AL ACA    L  G  V  +  +  +G+++ + +SLI MY+KC  ++ A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
           +FS ++ K +V WNA++ G++++ R  EA+ YF KM+   I P+  T +SV+ A + L +
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 457 IRYAKWIHALVIR-SCFEKNVFVMTALIDMYAKCGAVGTARALFDMM 502
           +   +    L+IR      NV   + ++D+  + G +  A+   D M
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 385



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 162/297 (54%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           II+ GL    +    L++++ K   +  A ++F+ +P +    ++TM+  + +    + A
Sbjct: 46  IIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKA 105

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
           +   ++M+ +  +   +  + ++  C     +   K++HG  +      ++F  T ++++
Sbjct: 106 LVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDV 165

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           YAKCG +++A  +F+ MPER  V+W+++VAG+ QN   E AL L  R    G   +  TI
Sbjct: 166 YAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTI 225

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
            S L A A   +L  GK V   + + G  S + V ++L+DMYAKCG +E A  VF  ++ 
Sbjct: 226 SSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE 285

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +NVV WN++++ +       EAM  F+KM   G+ P ++T +  L AC+ LG +E+G
Sbjct: 286 KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKG 342



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 143/293 (48%), Gaps = 14/293 (4%)

Query: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYA 114
           E +++    +K+ L       T L+ ++ K   + DA  VFE +P++ D  + +M+ GY 
Sbjct: 139 ECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYV 198

Query: 115 KFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLF 174
           +    ++A+    R +   +    +  +  L  C     +  GK++       G   ++F
Sbjct: 199 QNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIF 258

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
            ++ +++MYAKCG IEEAY +F  + E+++V WN I++GF+++  +  A+    +M + G
Sbjct: 259 VISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 318

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS------TALVDMYAKCG 288
              + IT +S+L A +++G +  G+      +R     + NVS      + +VD+  + G
Sbjct: 319 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIR-----VHNVSPNVLHYSCMVDILGRAG 373

Query: 289 RVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
            +  A+   D M      S W S++A+     N E A    + + +  +EP N
Sbjct: 374 LLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFE--IEPHN 424


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/585 (38%), Positives = 342/585 (58%), Gaps = 35/585 (5%)

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H   +R G      +   L+   +KC  ++ A  +F    + NV  + ++I  +V  GN
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG-------- 372
             EA++++ +ML + + P N  +   L AC     L  G  VH     LKLG        
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS--RALKLGFSSNRLVR 185

Query: 373 ------------------------TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
                                    DV  +  +IS YS    V+ A  +FS+++ K  V 
Sbjct: 186 LRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
           W AMI G+ +N   N AL  F  M+ +N++P+ FT+V V+ A ++L  +   +W+H+ + 
Sbjct: 246 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305

Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
           +   E N+FV  ALI+MY++CG++  A+ +FD M +R V T+N MI G   +G  + A+E
Sbjct: 306 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 365

Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
           LF  M+    +P ++TF+  ++ACSH GLV+ G   F S+ +DY +EP ++HYG MVDLL
Sbjct: 366 LFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLL 425

Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
           GR GRL EA+D I+ M + P   + G +L ACK+HKN+ELGE+ A  L +    + G +V
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV 485

Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
           LL+++YA++  W + A+VR  M++ G+QK PGCS +E+ NE+H F  G  +HPQ +RIY 
Sbjct: 486 LLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545

Query: 709 FLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
            LE L   ++  GY P+   +  D+ED  +E  L+ HSE+LAI +GL+++ P + I + K
Sbjct: 546 KLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMK 605

Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           NLRVC DCH+A K I+ +T R+I+VRD +RFH F+NG CSCGDYW
Sbjct: 606 NLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 191/383 (49%), Gaps = 34/383 (8%)

Query: 54  KELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
           + + ++LP+   +I++G         +L+    K +++  A+R+F+   +    LY  ++
Sbjct: 60  RHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 119

Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
            G+    +  +A+    RM ++ + P  Y    +LK CG    +R G+E+H + +  GFS
Sbjct: 120 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 179

Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE----------------------------- 201
            +      ++ +Y KCG++ +A ++F+ MPE                             
Sbjct: 180 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVR 239

Query: 202 -RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
            +D V W  ++ GF +N     AL+    M  E  R +  TIV +L A + +G+L IG+ 
Sbjct: 240 RKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRW 299

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           VH Y  +   +  + V  AL++MY++CG ++ A+ VFD MK R+V+++N+MI+     G 
Sbjct: 300 VHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGK 359

Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV-HKLLDQLKLGTDVSMTN 379
             +A+ +F+ M+ + + PTNVT +  L+AC+  G ++ G  + H +    ++   +    
Sbjct: 360 SRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYG 419

Query: 380 SLISMYSKCKKVDRAADIFSKLQ 402
            ++ +  +  +++ A D+   ++
Sbjct: 420 CMVDLLGRVGRLEEAYDLIRTMK 442



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 187/386 (48%), Gaps = 34/386 (8%)

Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGF 219
           IH QLI NG S D F +  ++   +KC  I+ A ++F      ++  +  ++ GF  +G 
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
              A+ L +RM  E    D   + SIL A  +  +LR G+ VH  A++ GF S   V   
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187

Query: 280 LVDMYAKCGRVETARLVFDGM------------------------------KSRNVVSWN 309
           ++++Y KCG +  AR VF+ M                              + ++ V W 
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247

Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
           +MI  +V       A+  F+ M  + V P   TI+  L AC+ LG LE G +VH  + + 
Sbjct: 248 AMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307

Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
           ++  ++ + N+LI+MYS+C  +D A  +F +++ + ++++N MI G + NG+  +A+  F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367

Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAK 488
             M  + ++P + T V V+ A +   ++ +   I H++      E  +     ++D+   
Sbjct: 368 RVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLL-- 425

Query: 489 CGAVGTARALFDMMNERHVTTWNVMI 514
            G VG     +D++    +T  ++M+
Sbjct: 426 -GRVGRLEEAYDLIRTMKMTPDHIML 450



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 35/327 (10%)

Query: 44  ALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           A +L+ C S   L+E R +    +K G     L + +++ L+ K   L DA RVFE +P+
Sbjct: 151 ASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE 210

Query: 101 KLDA------------------------------LYHTMLKGYAKFASLDDAVSFLIRMR 130
            + A                               +  M+ G+ +    + A+     M+
Sbjct: 211 DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQ 270

Query: 131 YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE 190
            ++V P  +    +L  C  +G +  G+ +H  +      L+LF    ++NMY++CG I+
Sbjct: 271 GENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSID 330

Query: 191 EAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
           EA  +FD M +RD++++NT+++G + NG +  A++L   M     R   +T V +L A +
Sbjct: 331 EAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACS 390

Query: 251 NVGSLRIGKAV-HGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK-SRNVVSW 308
           + G +  G  + H  A     +  +     +VD+  + GR+E A  +   MK + + +  
Sbjct: 391 HGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIML 450

Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQG 335
            ++++A     N E   ++ +++ D+G
Sbjct: 451 GTLLSACKMHKNLELGEQVAKELEDRG 477


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/805 (31%), Positives = 415/805 (51%), Gaps = 103/805 (12%)

Query: 57  RRILP----LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD---KLDALYHTM 109
           RR+ P    L +++GL         LV L  +       AR+     +   K   L++  
Sbjct: 68  RRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKH 127

Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG------- 162
           +   A+    D+A++    M+   V                    RRG+ +H        
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPR------------------RRGRAVHAYALKLAL 169

Query: 163 --QLIVNGFSLDLFA----------------------MTGVVNMYAKCGQIEEAYKMFDR 198
               +V GF   ++A                         VV   A+ G +++A ++  R
Sbjct: 170 DAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAAR 229

Query: 199 M----PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           M    PE ++ +WNT+++G +++G    AL +V  M ++G R D  T+ S+L +VAN G 
Sbjct: 230 MSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGL 289

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           LR G  +H + +R   +  V   TALVDMYAKCGR++ A+ VFD ++ RN+ +WNS++A 
Sbjct: 290 LRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAG 349

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
           Y   G  + A+ + + M    ++P                                   D
Sbjct: 350 YANAGRFDIALELVELMKKNRLDP-----------------------------------D 374

Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQG----KTLVSWNAMILGYAQNGRVNEALNYFC 430
           ++  N LI+ YS   +  +A  +  +++       +VSW ++I G   NG   ++  YFC
Sbjct: 375 ITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSF-YFC 433

Query: 431 -KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
            +M+   ++P   TM  ++ A A L++ +  K +H   +R  ++ ++ V TALIDMY+K 
Sbjct: 434 HEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKG 493

Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
           G++ +A+ +F+ + ++++   N M+ G   HG G+ A+ELF+ M     KP+ ITF   +
Sbjct: 494 GSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALL 553

Query: 550 SACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPG 609
           +AC   GLV EG  YF  ++  YG++P  ++Y  MVDLL R G L+EA DFI++ PI+PG
Sbjct: 554 TACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPG 613

Query: 610 ITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTI 669
            + +GA+L  C IH N+ L E AA  LF L+P     ++L+ N+Y    M+D+   ++  
Sbjct: 614 ASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYA 673

Query: 670 MEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI 729
           M+ +G+   PG S ++++  +H F      HP++  IY  L  L+ +IK AGYVPDT+ I
Sbjct: 674 MKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCI 733

Query: 730 -HDVEDYVQENLLSSHSEKLAIAFGLLNSSPG-STIHIRKNLRVCGDCHNATKYISLVTG 787
            ++V++  +E LL  H+EKLAI +GL+ S    + + + KN R+C DCH   K+IS +  
Sbjct: 734 AYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCD 793

Query: 788 REIIVRDMHRFHCFKNGVCSCGDYW 812
           R+II+RD  RFH F +G CSC DYW
Sbjct: 794 RQIILRDAVRFHHFVDGKCSCNDYW 818


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/742 (35%), Positives = 404/742 (54%), Gaps = 48/742 (6%)

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
           L + ++  + K    D A +   R+R     P  Y+++ +++       I   + +   +
Sbjct: 44  LTNLLIDLFGKCGDPDAARAVFNRVRL----PNEYSWSCIIQAYVSSSRIHDARALFDSM 99

Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM-PERDLVSWNTIVAGFAQNGFAELA 223
              GF  D F    ++  YA+  ++++A ++F  M   RD+VSW  +VAG+A++   E A
Sbjct: 100 --PGF--DAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEA 155

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             L  RM       D +T  S+L   A+ G L   + +      AG D       A++  
Sbjct: 156 SALFRRMP----LWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAG-DRDATACNAMIAA 210

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM------------ 331
           Y K  RV+ A  +F  +K RN  SW+ ++  Y + G+ + A + F +M            
Sbjct: 211 YGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMT 270

Query: 332 ---LDQG-----------VEPTNVTIMEAL-HACADLGDLERGIFVHKLLDQLKLGTDVS 376
               DQG           +   +V    AL    +  GDL+    +   ++   + T V 
Sbjct: 271 AVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTV- 329

Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
           +  +L+++Y KC +VD A  +   +  +T VSW AMI  YAQNG   EA+N F  M  + 
Sbjct: 330 VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEG 389

Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVMTALIDMYAKCGAVGTA 495
            +P   T++SV+ + A L  +   K IHA +  S  F +++ ++ A+I MY KCG +  A
Sbjct: 390 AEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELA 449

Query: 496 RALFDM--MNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLCAISAC 552
           R +F+   +  R V TW  MI  Y  +G+G+ A+ELF +M ++G T+PN +TFL  +SAC
Sbjct: 450 REVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSAC 509

Query: 553 SHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI-QKMPIEPGIT 611
           SH G +E+   +F S+  D+G+ P  DHY  +VDLLGRAGRL EA   + +    E  + 
Sbjct: 510 SHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVV 569

Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
            + A L AC+++ ++E  ++AA R+ EL+P+     VLL+N+YAA      +A++R  M+
Sbjct: 570 CWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMK 629

Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-H 730
             G++K  G S +E+ N VH F      HP+   IY+ LE L  EIK AGYVPDT  +  
Sbjct: 630 SSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLR 689

Query: 731 DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
           DV++  +  LL  HSE+LA+A G++++ PG+T+ + KNLRVC DCH ATK+IS + GR+I
Sbjct: 690 DVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQI 749

Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
           IVRD  RFH FK+GVCSCGDYW
Sbjct: 750 IVRDTSRFHHFKDGVCSCGDYW 771



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 193/476 (40%), Gaps = 96/476 (20%)

Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCG----------------------------- 288
            K +H    R+       ++  L+D++ KCG                             
Sbjct: 26  AKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVS 85

Query: 289 --RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
             R+  AR +FD M   +  +WN MIAAY      ++A  +F  M+  G +  +  I+ A
Sbjct: 86  SSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMI-SGRDVVSWAILVA 144

Query: 347 LHACADLGDLERGIF--------------------------VHKLLDQLKLGTDVSMT-- 378
            +A  D  +    +F                            +L D++    D   T  
Sbjct: 145 GYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATAC 204

Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
           N++I+ Y K  +VD A  +F++++ +   SW+ ++L YAQNG ++ A   F +M  ++  
Sbjct: 205 NAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRD-- 262

Query: 439 PDSFT-MVSVIPALAEL----SVIRYAKWIHALVIRSCFE-----------KNVF----- 477
             +FT M +V+    EL     ++RY   +  +   +  E           + +F     
Sbjct: 263 SIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEH 322

Query: 478 -------VMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELF 530
                  V   L+++Y KCG V  AR + D M  R   +W  MI  Y  +G    A+ LF
Sbjct: 323 RTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLF 382

Query: 531 NKM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLG 589
             M LEG  +P+DIT +  + +C+  G +  G      ++        +    A++ + G
Sbjct: 383 QCMDLEG-AEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYG 441

Query: 590 RAGRLNEAWDFIQKMPIEP-GITVFGAMLGACKIHKNVELGEKAANRLFELDPDEG 644
           + G L  A +  + +P+    +  + AM+ A   +    +GE+A     E+  D G
Sbjct: 442 KCGNLELAREVFESVPLRTRSVVTWTAMIRA---YAQNGVGEEAIELFQEMVIDGG 494



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 12/298 (4%)

Query: 53  LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKG 112
           L E+RR+   +    +    +  T LV+L+ K   + DA RV + +P +    +  M+  
Sbjct: 310 LDEVRRLFSAMEHRTVATTVVAGT-LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAA 368

Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG-FSL 171
           YA+  +  +A++    M  +   P       ++  C  +G +  GK IH ++  +  FS 
Sbjct: 369 YAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQ 428

Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTR 229
            L  +  V+ MY KCG +E A ++F+ +P   R +V+W  ++  +AQNG  E A++L   
Sbjct: 429 SLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQE 488

Query: 230 MH-EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD--SIVNVSTALVDMYAK 286
           M  + G   + +T +S+L A +++G L      H  +M   F      +    LVD+  +
Sbjct: 489 MVIDGGTEPNRVTFLSVLSACSHLGQLEQAWE-HFCSMGPDFGVPPAGDHYCCLVDLLGR 547

Query: 287 CGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
            GR+  A  +    K    +VV W + ++A    G+ E + R  +++ +  +EP NV 
Sbjct: 548 AGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSE--LEPENVA 603



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
           E + ACA    L     +H  + +   G +  +TN LI ++ KC   D A  +F++++  
Sbjct: 12  ERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLP 71

Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
              SW+ +I  Y  + R+++A   F  M       D+FT   +I A A ++ +  A+ + 
Sbjct: 72  NEYSWSCIIQAYVSSSRIHDARALFDSMPGF----DAFTWNIMIAAYARINRLDDARELF 127

Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
             +I     ++V     L+  YA+   +  A ALF  M      T   ++ GY  +G   
Sbjct: 128 HGMISG---RDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLA 184

Query: 525 AAVELFNKM 533
            A ELF+++
Sbjct: 185 EAQELFDRI 193


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/544 (40%), Positives = 332/544 (61%)

Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
           GF+    +   ++ M+ KCG +  AR +FD M  RN+VSWN++I+  V+ G+  EA R+F
Sbjct: 5   GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64

Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
             M ++  +  + T    + A A L  +  G  +H    ++ +G D+ ++ +LI MYSKC
Sbjct: 65  LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKC 124

Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
             ++ A  +F ++  KT V WN +I GYA +G   EAL+ + +MR   +K D FT   ++
Sbjct: 125 GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIV 184

Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
              A L+ + +AK  HA +IR  F  ++   TAL+D Y+K G +  AR +FD M  ++V 
Sbjct: 185 RICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVI 244

Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSL 568
           +WN +I GYG HG G  AVELF +M++    PN ITFL  +SACSHSGL E G   F S+
Sbjct: 245 SWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSM 304

Query: 569 KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVEL 628
            +D  I+P   HY  M++L+GR G L+EA   I+  P +P   ++ A+L AC++++N EL
Sbjct: 305 GRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFEL 364

Query: 629 GEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
           G+ AA +L+ ++PD+   +++L NIY +A    + A V   +++KGL+  P CS +E+K 
Sbjct: 365 GKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKR 424

Query: 689 EVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKL 748
             H F SG  +HPQ K IY  ++ L+ EI   GYVP+  ++    D  +E +   HSEKL
Sbjct: 425 RPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYHSEKL 484

Query: 749 AIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSC 808
           AIAFGL+++   + + I +  R+CGDCH A K I+ VTGREI++RD  RFH FK+G CSC
Sbjct: 485 AIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSC 544

Query: 809 GDYW 812
            DYW
Sbjct: 545 EDYW 548



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 216/442 (48%), Gaps = 37/442 (8%)

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
           +I NGF  D +    V+ M+ KCG + +A ++FD MPER+LVSWNTI++G    G    A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
             L   M EE       T   ++ A A +  + IG+ +H   ++ G    + VS AL+DM
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           Y+KCG +E AR VF+ M  +  V WN++IA Y   G  EEA+ ++ +M D GV+  + T 
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
              +  CA L  +E     H  L +   G+D+    +L+  YSK  +++ A  +F K+  
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           K ++SWNA+I GY  +GR +EA+  F +M  + + P+  T ++V+ A +  S +    W 
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSH-SGLSERGW- 298

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
              + +S    N     A   M+  C                       MI+  G  GL 
Sbjct: 299 --EIFQSMGRDNRIKPRA---MHYAC-----------------------MIELMGREGLL 330

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP-VMDHYG 582
             A+ L       P KP    +   ++AC  +   E G     + +K YG+EP  +++Y 
Sbjct: 331 DEALALIRG---APFKPTANMWAALLTACRVNENFELGKF---AAEKLYGMEPDKLNNYI 384

Query: 583 AMVDLLGRAGRLNEAWDFIQKM 604
            ++++   AG L EA D +  +
Sbjct: 385 VLLNIYNSAGNLKEAADVVHTL 406



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 164/297 (55%)

Query: 63  IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
           +I +G       + +++ +  K   + DA R+F+ +P++    ++T++ G        +A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
               + M  +      + +  +++    +  I  G+++H   +  G   D+F    +++M
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
           Y+KCG IE+A  +F+ MPE+  V WNTI+AG+A +G++E ALD+   M + G + D  T 
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
             I+   A + S+   K  H   +R GF S +  +TALVD Y+K GR+E AR VFD M S
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
           +NV+SWN++I  Y   G   EA+ +F++M+ + + P ++T +  L AC+  G  ERG
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERG 297



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 110/197 (55%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
           R++    +K G+ D       L+ ++ K  S+ DA  VFE +P+K    ++T++ GYA  
Sbjct: 96  RQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALH 155

Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
              ++A+     MR   V    + ++ ++++C  +  +   K+ H  LI +GF  D+ A 
Sbjct: 156 GYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVAN 215

Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
           T +V+ Y+K G+IE+A  +FD+M  ++++SWN ++ G+  +G    A++L  +M +E   
Sbjct: 216 TALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMN 275

Query: 237 GDFITIVSILPAVANVG 253
            + IT +++L A ++ G
Sbjct: 276 PNHITFLAVLSACSHSG 292



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 467 VIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAA 526
           +I + FE + ++   ++ M+ KCG +  AR LFD M ER++ +WN +I G    G    A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 527 VELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH-YFTSLKKDYGIEPVMDHYGAMV 585
             LF  M E  +     TF   I A +   L+  G   +  +LK   G +  +    A++
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVS--CALI 118

Query: 586 DLLGRAGRLNEAWDFIQKMP 605
           D+  + G + +A    ++MP
Sbjct: 119 DMYSKCGSIEDARFVFEEMP 138



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/216 (18%), Positives = 89/216 (41%), Gaps = 7/216 (3%)

Query: 44  ALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
           ++++ +C    S++  ++    +I+ G     +  T LV  + K+  + DA  VF+ +  
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEI 160
           K    ++ ++ GY       +AV    +M  + + P    +  +L  C   G   RG EI
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300

Query: 161 HGQL-IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS-WNTIVAGFAQNG 218
              +   N           ++ +  + G ++EA  +    P +   + W  ++     N 
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNE 360

Query: 219 FAELALDLVTRMH--EEGRRGDFITIVSILPAVANV 252
             EL      +++  E  +  ++I +++I  +  N+
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNL 396


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/673 (33%), Positives = 371/673 (55%), Gaps = 6/673 (0%)

Query: 47  LEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
           L  CTS   LK+ + I   I   G     +    L+  +   +  + A  VF+     LD
Sbjct: 10  LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69

Query: 104 -ALYHTMLKGYAKFASLDDAVSFLIRMRYDD-VAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
            +L++ +L  Y       +A+    ++  +  V P  Y Y  +LK CG +G +  G+ IH
Sbjct: 70  VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
             L+  G   D+F  + ++NMYAKC Q  +A K+FD  P+RD+  WN +++ + ++G AE
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
           +AL    +M E G   + +T   ++ +   + +L  GK VH   +         V +ALV
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
           DMY KCG +E A+ VF+ +  +N ++WN+MI  Y   G+    + +  +M D+G +PT +
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLM 309

Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
           T+   ++A +    L  G F+H  + + ++  D+ +  SLI  Y KC  V  A  IF  +
Sbjct: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTI 369

Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
               +VSWN MI G+   G   +AL+ +  M+  ++KPD+ T  S + A ++L+ +   +
Sbjct: 370 SKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGR 429

Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
            +H  +I    E N  VM AL+DMYAKCG V  AR LF  + +R + +W  MI  YG+HG
Sbjct: 430 ELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHG 489

Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
               A+ LF++M +   + + +TFL  +SACSH+GLV+EG  YF  +   Y I+P ++HY
Sbjct: 490 QASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHY 549

Query: 582 GAMVDLLGRAGRLNEAWDFIQK-MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD 640
             ++DLLGRAGRL+EA++ +Q+       I +   +  AC +H N  LG +    L E+D
Sbjct: 550 SCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVD 609

Query: 641 PDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKH 700
           PD+   ++LL+N+YA+ + WD++ KVR  M++ GL+K+PGCS +E+   +H F++    +
Sbjct: 610 PDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSN 669

Query: 701 PQSKRIYTFLETL 713
           P +  +Y  L  L
Sbjct: 670 PLADGVYECLNIL 682



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 184/364 (50%), Gaps = 7/364 (1%)

Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
           D++T++S L    +   L+ GK +H      GF S + +S +L+  Y  C    +A LVF
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 298 DGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGD 355
                   VS WN++++AY       EA+++F ++  +  V P   T    L AC  LG 
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121

Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
           +  G  +H  L +  L  DV + +SL++MY+KC +   A  +F +   + +  WNA+I  
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181

Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
           Y ++G+   AL  F KM+    +P+S T   V+ +   L  +   K +H  +I      +
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241

Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
            FV++AL+DMY KCG +  A+ +F+ +  ++  TWN MI GY   G  ++ +EL  +M +
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301

Query: 536 GPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGR 593
             TKP  +T    I A S S  +  G  IH +  L+    ++  +D   +++D   + G 
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYI-LRNRIDVDIFID--VSLIDFYFKCGY 358

Query: 594 LNEA 597
           ++ A
Sbjct: 359 VSSA 362


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/640 (36%), Positives = 376/640 (58%), Gaps = 18/640 (2%)

Query: 175 AMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
           +  G+++ + K G + EA ++FD MP+R++VSW ++V G+ +NG    A  L   M  + 
Sbjct: 88  SWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHK- 146

Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
              + ++   +L  +   G  R+  A   + M    D +    T ++  Y + GR++ AR
Sbjct: 147 ---NVVSWTVMLGGLLQEG--RVDDARKLFDMMPEKDVVA--VTNMIGGYCEEGRLDEAR 199

Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
            +FD M  RNVV+W +M++ Y   G  + A ++F+ M ++        ++   H+    G
Sbjct: 200 ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHS----G 255

Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
            +        L D + +   V + N +I  +    +VD+A  +F  ++ +   +W+AMI 
Sbjct: 256 RMREA---SSLFDAMPV-KPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIK 311

Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
            Y + G   EAL  F +M+ + +  +  +++SV+     L+ + + K +HA ++RS F++
Sbjct: 312 VYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQ 371

Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
           +++V + LI MY KCG +  A+ +F+    + V  WN MI GY  HGLG+ A+ +F+ M 
Sbjct: 372 DLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMC 431

Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
                P+D+TF+  +SACS+SG V+EG+  F ++K  Y +EP ++HY  +VDLLGRA ++
Sbjct: 432 SSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQV 491

Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
           NEA   ++KMP+EP   V+GA+LGAC+ H  ++L E A  +L +L+P   G +VLL+N+Y
Sbjct: 492 NEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMY 551

Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFLETL 713
           A    W  +  +R  ++ + + K PGCS +E++ +VH F  G +K HP+   I   LE L
Sbjct: 552 AYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKL 611

Query: 714 IDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVC 772
              ++ AGY PD + + HDV++  + + L  HSEKLA+A+GLL    G  I + KNLRVC
Sbjct: 612 GGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVC 671

Query: 773 GDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           GDCH+A K I+ VTGREII+RD +RFH FK+G CSC DYW
Sbjct: 672 GDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 227/465 (48%), Gaps = 29/465 (6%)

Query: 78  LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
           L+S   K   LS+A RVF+ +PD+    + +M++GY +   + +A      M + +V   
Sbjct: 92  LISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV-- 149

Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
             ++T +L      G +   +++   +       D+ A+T ++  Y + G+++EA  +FD
Sbjct: 150 --SWTVMLGGLLQEGRVDDARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDEARALFD 203

Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
            MP+R++V+W  +V+G+A+NG  ++A  L   M E       ++  ++L    + G +R 
Sbjct: 204 EMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNE----VSWTAMLLGYTHSGRMRE 259

Query: 258 GKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
             ++        FD++    V V   ++  +   G V+ AR VF GMK R+  +W++MI 
Sbjct: 260 ASSL--------FDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIK 311

Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
            Y   G   EA+ +F++M  +G+     +++  L  C  L  L+ G  VH  L + +   
Sbjct: 312 VYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQ 371

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
           D+ + + LI+MY KC  + RA  +F++   K +V WN+MI GY+Q+G   EALN F  M 
Sbjct: 372 DLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMC 431

Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAV 492
           S  + PD  T + V+ A +    ++   +    +  +   E  +     L+D+  +   V
Sbjct: 432 SSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQV 491

Query: 493 GTARALFDMMN-ERHVTTWNVMIDGYGTH---GLGKAAVELFNKM 533
             A  L + M  E     W  ++    TH    L + AVE   ++
Sbjct: 492 NEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQL 536



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 171/341 (50%), Gaps = 12/341 (3%)

Query: 76  TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS-FLIRMRYDDV 134
           T ++  +C+   L +A  +F+ +P +    +  M+ GYA+   +D A   F +    ++V
Sbjct: 183 TNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEV 242

Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
           +     +T +L      G +R    +   + V      +     ++  +   G++++A +
Sbjct: 243 S-----WTAMLLGYTHSGRMREASSLFDAMPVK----PVVVCNEMIMGFGLNGEVDKARR 293

Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
           +F  M ERD  +W+ ++  + + G+   AL L  RM  EG   +F +++S+L    ++ S
Sbjct: 294 VFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLAS 353

Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
           L  GK VH   +R+ FD  + V++ L+ MY KCG +  A+ VF+    ++VV WNSMI  
Sbjct: 354 LDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITG 413

Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGT 373
           Y + G  EEA+ +F  M   GV P +VT +  L AC+  G ++ G+ + + +  + ++  
Sbjct: 414 YSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEP 473

Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKT-LVSWNAMI 413
            +     L+ +  +  +V+ A  +  K+  +   + W A++
Sbjct: 474 GIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 157/338 (46%), Gaps = 37/338 (10%)

Query: 277 STALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
           S+  +  YA+ G+++ AR VFD   +  R V SWN+M+AAY E   P EA+ +F+KM  +
Sbjct: 25  SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR 84

Query: 335 GVEPTNVTIMEALHACADLGDLERGIF--VHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
                N  I          G ++ G+     ++ D +     VS T S++  Y +   V 
Sbjct: 85  NTVSWNGLIS---------GHIKNGMLSEARRVFDTMPDRNVVSWT-SMVRGYVRNGDVA 134

Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
            A  +F  +  K +VSW  M+ G  Q GRV++A   F  M  K++      + ++I    
Sbjct: 135 EAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDV----VAVTNMIGGYC 190

Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
           E   +  A+     +     ++NV   TA++  YA+ G V  AR LF++M ER+  +W  
Sbjct: 191 EEGRLDEAR----ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTA 246

Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLC--AISACSHSGLVEEGIHYFTSLK- 569
           M+ GY   G  + A  LF+ M   P KP     +C   I     +G V++    F  +K 
Sbjct: 247 MLLGYTHSGRMREASSLFDAM---PVKP---VVVCNEMIMGFGLNGEVDKARRVFKGMKE 300

Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
           +D G       + AM+ +  R G   EA    ++M  E
Sbjct: 301 RDNGT------WSAMIKVYERKGYELEALGLFRRMQRE 332



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 88/179 (49%), Gaps = 8/179 (4%)

Query: 42  PSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFE 96
           PS + +L VC SL  L   +++   +++S   DQ L+  + L++++ K  +L  A +VF 
Sbjct: 339 PSLISVLSVCVSLASLDHGKQVHAQLVRSEF-DQDLYVASVLITMYVKCGNLVRAKQVFN 397

Query: 97  PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
             P K   ++++M+ GY++    ++A++    M    V P    +  +L  C   G+++ 
Sbjct: 398 RFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKE 457

Query: 157 GKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG 213
           G E+   +         +     +V++  +  Q+ EA K+ ++MP E D + W  ++  
Sbjct: 458 GLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516


>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/570 (38%), Positives = 349/570 (61%), Gaps = 15/570 (2%)

Query: 253 GSLRIGKAVHGYAM-----RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS 307
            S+ I + +H + +     R GF     +   LV  Y K G  + A L+FD M  ++ VS
Sbjct: 59  SSVSICRIIHAHVIKSLDYRDGF-----IGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVS 113

Query: 308 WNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
           WNS+++   + G   E + +F KM  D  ++    T +  + AC      + G +VH   
Sbjct: 114 WNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCA 173

Query: 367 DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL--QGKTLVSWNAMILGYAQNGRVNE 424
            +L L  +V + N+L++MY K   V+ A  +FS++    K++VSWN+++   AQNG  NE
Sbjct: 174 MKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNE 233

Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
           A N F  MR     PD  TMVS++ A     + R  + +H ++     ++N+ ++T L++
Sbjct: 234 AFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLN 293

Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDI 543
           +Y+K G +  +R +F+ +++     W  M+ GY  HG GK A+E F +++ E   +P+ +
Sbjct: 294 LYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHV 353

Query: 544 TFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQK 603
           TF   +SACSHSGLV+EG ++F  +   Y ++P +DHY  MVDLLGR G L++A + I+ 
Sbjct: 354 TFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKN 413

Query: 604 MPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKL 663
           MP EP   V+GA+LGAC++H+N++LG++AA  L  LDP +   +++L+N+Y+AA +W+  
Sbjct: 414 MPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDA 473

Query: 664 AKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYV 723
           +KVRT+M+ K L +  GCS +E  N++H F      HP S RI+  LE ++ +I+  G+V
Sbjct: 474 SKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFV 533

Query: 724 PDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYI 782
            +T SI HDV++ V+ ++++ HSEK+A+A+GLL ++    + I KNLR+C DCHN  K++
Sbjct: 534 HETESILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFV 593

Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
           S+V  R II+RD  RFH F  G+CSCGDYW
Sbjct: 594 SMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 184/362 (50%), Gaps = 5/362 (1%)

Query: 45  LLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDA 104
           L L+  +S+   R I   +IKS          +LVS + K     DA  +F+ +P K   
Sbjct: 53  LHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFV 112

Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
            +++++ G AK   L + +S   +M+ D ++    + +  ++  C        G  +H  
Sbjct: 113 SWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCC 172

Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGFAE 221
            +  G   ++  +  +VNMY K G +E A+++F  MPE  + +VSWN+IVA  AQNG   
Sbjct: 173 AMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPN 232

Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
            A +    M   G   D  T+VS+L A  N    R+ + +HG     G D  + + T L+
Sbjct: 233 EAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLL 292

Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTN 340
           ++Y+K GR+  +R VF+ +   + V+W +M+A Y   G  +EA+  F++++ ++G+EP +
Sbjct: 293 NLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDH 352

Query: 341 VTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
           VT    L AC+  G ++ G +  +++ D  K+   +   + ++ +  +C  +D A ++  
Sbjct: 353 VTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIK 412

Query: 400 KL 401
            +
Sbjct: 413 NM 414



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
           + ++I  L   S +   + IHA VI+S   ++ F+   L+  Y K G    A  LFD M 
Sbjct: 48  LSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMP 107

Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKML-EGPTKPNDITFLCAISACSHSGLVEEGI 562
           ++   +WN ++ G    G     + +F KM  +   K N+ TFL  ISAC      +EG 
Sbjct: 108 KKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEG- 166

Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP-IEPGITVFGAMLGAC 620
           +Y        G+   +    A+V++ G+ G +  A+    +MP  E  I  + +++  C
Sbjct: 167 YYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVC 225



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)

Query: 46  LLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI--PD 100
           LL+ C +    R +  L   I   GL +     T L++L+ K   L+++ +VFE I  PD
Sbjct: 256 LLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPD 315

Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
           K+   +  ML GYA      +A+ F  R+ R + + P    +T+LL  C   G ++ GK 
Sbjct: 316 KV--AWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKY 373

Query: 160 IHGQLI-VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
               +  V      L   + +V++  +CG +++A+++   MP
Sbjct: 374 FFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMP 415


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/741 (34%), Positives = 397/741 (53%), Gaps = 17/741 (2%)

Query: 83  CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYT 142
           CK      A ++F+ +       Y++++ GY + ++LD  +    + R   +    YN  
Sbjct: 12  CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 143 YLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER 202
             L  C   G +  GK IHG ++V G    +     +++MY+KCGQ++ A  +FD   + 
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 203 DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV--GSLRIGKA 260
           D VSWN+++AG+ QNG  E  L ++ +MH+ G   +  T+ S L A ++   G    G  
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
           +H +A++ G    V V TAL+DMYAK G ++ A  +FD M  +NVV +N+M+A  ++   
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251

Query: 321 PEE-----AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
            E+     A+ +F +M   G++P+  T    L AC  + D +    VH L+ +  L +D 
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311

Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
            + + LI +YS    +  A   F+ +   T+V   AMI GY QNG    AL+ F ++ + 
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371

Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
             KPD F   +++ + A + ++R  + I     +    +      + I MYAK G +  A
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAA 431

Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
              F  M    + +W+ MI     HG    A+  F  M     +PN   FL  + ACSH 
Sbjct: 432 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491

Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
           GLVEEG+ YF +++KDY ++  + H   +VDLLGRAGRL +A   I ++  E    ++ A
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551

Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
           +L AC+IHK+    ++ A ++ EL+P     +VLL NIY  A      +KVRT+ME++ +
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRI 611

Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDY 735
           +K PG S +++ ++V+SF SG   H  S +IY  L+ ++   K        +S  D+  Y
Sbjct: 612 KKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR------LDSAKDILGY 665

Query: 736 VQENL----LSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
             E+     ++ HSEKLA+AFG+L  S  + + + KNLR+C DCH   K  S+V  RE+I
Sbjct: 666 KIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELI 725

Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
           VRD  RFH FK+G CSCGDYW
Sbjct: 726 VRDSVRFHHFKDGSCSCGDYW 746



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 241/474 (50%), Gaps = 13/474 (2%)

Query: 173 LFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHE 232
           +F M    +   KCG    A K+FD+M + ++V++N++++G+ Q    +  + L  +   
Sbjct: 1   MFHMLPFSSRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARR 60

Query: 233 EGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVET 292
            G + D       L A +  G+L  GK +HG  +  G  S V ++ +L+DMY+KCG+V+ 
Sbjct: 61  LGLKLDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDY 120

Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
           AR++FD     + VSWNS+IA YV+ G  EE + I QKM   G+     T+  AL AC+ 
Sbjct: 121 ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSS 180

Query: 353 --LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWN 410
              G    G  +H    +L L  DV +  +L+ MY+K   +D A  IF ++  K +V +N
Sbjct: 181 NFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYN 240

Query: 411 AMILGYAQNGRVNE-----ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
           AM+ G  Q   + +     ALN F +M+S  IKP  FT  S++ A   +   ++AK +HA
Sbjct: 241 AMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHA 300

Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
           L+ ++    + ++ + LID+Y+  G++  A   F+ ++   +     MI GY  +G  ++
Sbjct: 301 LMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFES 360

Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
           A+ LF ++L    KP++  F   +S+C++ G++  G        K  GI        + +
Sbjct: 361 ALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK-VGISRFTIFQNSQI 419

Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
            +  ++G L  A    Q+M   P I  +  M+ +   H +       A R FEL
Sbjct: 420 WMYAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGHA----MEALRFFEL 468



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 11/489 (2%)

Query: 57  RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAK 115
           + I  LI+  GL  Q +    L+ ++ K   + D AR+     DKLD + +++++ GY +
Sbjct: 87  KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQV-DYARILFDHSDKLDGVSWNSLIAGYVQ 145

Query: 116 FASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD--VGEIRRGKEIHGQLIVNGFSLDL 173
               ++ ++ L +M  + +A   Y     LK C     G    G  +H   I  G  LD+
Sbjct: 146 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 205

Query: 174 FAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE-----LALDLVT 228
              T +++MYAK G +++A ++FD+M ++++V +N ++AG  Q    E      AL+L  
Sbjct: 206 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 265

Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
            M   G +    T  S+L A   V   +  K VH    + G  S   + + L+D+Y+  G
Sbjct: 266 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 325

Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
            +  A L F+ + +  +V   +MI  Y++ G  E A+ +F ++L    +P        + 
Sbjct: 326 SMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMS 385

Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
           +CA++G L  G  +     ++ +       NS I MY+K   +  A   F +++   +VS
Sbjct: 386 SCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVS 445

Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALV 467
           W+ MI   AQ+G   EAL +F  M+S  I+P+ F  + V+ A +   ++    ++   + 
Sbjct: 446 WSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTME 505

Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAA 526
                + +V     ++D+  + G +  A +L   +  E     W  ++     H     A
Sbjct: 506 KDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTA 565

Query: 527 VELFNKMLE 535
             +  K++E
Sbjct: 566 QRVAQKVIE 574



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 23/306 (7%)

Query: 46  LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
           LL+ C  +++ +   ++  L+ K+GL       + L+ L+    S+ DA   F  I +  
Sbjct: 282 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLT 341

Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
                 M+ GY +    + A+S    +   +  P  + ++ ++  C ++G +R G++I G
Sbjct: 342 IVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQG 401

Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
                G S         + MYAK G +  A   F +M   D+VSW+T++   AQ+G A  
Sbjct: 402 HATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAME 461

Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIG-----KAVHGYAMRAGFDSIVNVS 277
           AL     M   G   +    + +L A ++ G +  G          Y M+      V V 
Sbjct: 462 ALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV- 520

Query: 278 TALVDMYAKCGRVETA-----RLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
              VD+  + GR+  A     RL F+       V W ++++A     +   A R+ QK++
Sbjct: 521 ---VDLLGRAGRLADAESLILRLGFE----HEPVMWRALLSACRIHKDTVTAQRVAQKVI 573

Query: 333 DQGVEP 338
           +  +EP
Sbjct: 574 E--LEP 577


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/615 (35%), Positives = 352/615 (57%), Gaps = 2/615 (0%)

Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
           +++ ++G     +   A++   +++ + + P  + + +L K C  +  +   + IH  ++
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
            + F  D++  T +V+MY KCG++++AY +FD+MP R++ SWN ++ GF+Q G  +   +
Sbjct: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139

Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
           L   M   G R D  T++ +  AV +  SLR  KAVH   +  G D+  +VS   +  Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199

Query: 286 KCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
           KCG ++ A++VF G++  +R+ VSWNS+IA Y   G   +A++ ++ +L  G +P   TI
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259

Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
           +  L +C     L  G  +H    QL   +D+S+ N+LISMYS+C  +  A  +F  +  
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319

Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWI 463
           +T VSW AMI GY++ GRV++AL  F  M     KPD  T++S+I    +   +    WI
Sbjct: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWI 379

Query: 464 HALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLG 523
                    +K+V V  ALIDMYAKCG++  AR +F  +  R V +W  MI     +G  
Sbjct: 380 DNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEF 439

Query: 524 KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGA 583
           + A++LF+ + E   +PN+ITFL  + AC H G +E+G   F  + + YGI P +DHY  
Sbjct: 440 REALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSC 499

Query: 584 MVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDE 643
           M+DLLGR G+L EA + IQ MP++P   ++GA+LGACKIH N+E+GE  +  LFEL P  
Sbjct: 500 MIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRV 559

Query: 644 GGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQS 703
               V +ANIYA+   WD++A +R  M    ++K+PG S+V++    H F+     H  S
Sbjct: 560 AVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDS 619

Query: 704 KRIYTFLETLIDEIK 718
             IY  L  L  ++K
Sbjct: 620 LLIYEALGNLAMQMK 634



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 258/571 (45%), Gaps = 56/571 (9%)

Query: 45  LLLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
            L + C  L  L     I   ++KS        QT +V ++ K   + DA  +F+ +P +
Sbjct: 57  FLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR 116

Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
             A ++ M+ G+++  SLD   +  + MR     P       L +       +R  K +H
Sbjct: 117 NIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVH 176

Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPE--RDLVSWNTIVAGFAQNGF 219
              I  G   D       +  Y+KCG+++ A  +F  + +  R  VSWN+++A +A  G 
Sbjct: 177 AIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGK 236

Query: 220 AELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTA 279
              A+     +  +G + D  TI+S+L +     +L  G  +HG+  + G DS +++   
Sbjct: 237 YVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINT 296

Query: 280 LVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPT 339
           L+ MY++CG + +A ++FDGM  R  VSW +MI+ Y E G  ++A+ +F  M + G +P 
Sbjct: 297 LISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPD 356

Query: 340 NVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFS 399
            VT++  +  C   G L  G ++       +L  DV + N+LI MY+KC  ++ A +IF 
Sbjct: 357 IVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFY 416

Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
            L  +T+VSW AMI   A NG   EAL+ F  +    I+P++ T ++V+ A         
Sbjct: 417 SLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCH------ 470

Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMI 514
                                         G +   R  F MM ER+     +  ++ MI
Sbjct: 471 -----------------------------GGYLEKGRECFMMMTERYGINPGLDHYSCMI 501

Query: 515 DGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGI 574
           D  G  G    A+E+   M   P KP++  +   + AC     +E G +    L   + +
Sbjct: 502 DLLGRKGKLIEALEVIQDM---PMKPDEGIWGALLGACKIHNNMEIGEYVSRYL---FEL 555

Query: 575 EP-VMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
           +P V   +  M ++    GR    WD +  M
Sbjct: 556 QPRVAVSFVEMANIYASVGR----WDEVAAM 582



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 221/443 (49%), Gaps = 8/443 (1%)

Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
           L  WN+ + G    G A  AL L  ++   G + +  T   +  A A +  L   + +H 
Sbjct: 17  LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHT 76

Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
           + +++ F S + V TA+VDMY KCG+V+ A  +FD M  RN+ SWN+MI  + + G+ + 
Sbjct: 77  HVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDR 136

Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
              +F  M   G  P   T++    A      L     VH +  +  L  D S++N+ I+
Sbjct: 137 VFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIA 196

Query: 384 MYSKCKKVDRAADIFSKLQ--GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDS 441
            YSKC ++  A  +F  +Q   ++ VSWN++I  YA  G+  +A+  +  +     KPD+
Sbjct: 197 AYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDA 256

Query: 442 FTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDM 501
            T++S++ +  +   + Y   IH    +   + ++ ++  LI MY++CG + +A  LFD 
Sbjct: 257 STIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDG 316

Query: 502 MNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG 561
           M+ R   +W  MI GY   G    A+ LFN M E   KP+ +T L  IS C  +G +  G
Sbjct: 317 MSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG 376

Query: 562 IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACK 621
            H+  +    + ++  +    A++D+  + G LN+A +    +P    +  + AM+ AC 
Sbjct: 377 -HWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLP-NRTVVSWTAMIAACA 434

Query: 622 IHKNVELGEKAANRLFELDPDEG 644
           +  N E  E  A  LF L  + G
Sbjct: 435 L--NGEFRE--ALDLFSLLSESG 453



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 2/151 (1%)

Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
           + FSKL   TL  WN+ I G    G  ++AL  F +++   ++P++FT   +  A A+LS
Sbjct: 9   NCFSKLS--TLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLS 66

Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
            +  ++ IH  V++S F  +++V TA++DMY KCG V  A  LFD M  R++ +WN MI 
Sbjct: 67  HLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMII 126

Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
           G+   G       LF  M    T+P+  T +
Sbjct: 127 GFSQIGSLDRVFNLFMGMRLVGTRPDAATVI 157


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,399,792,247
Number of Sequences: 23463169
Number of extensions: 508914043
Number of successful extensions: 1404174
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9586
Number of HSP's successfully gapped in prelim test: 2681
Number of HSP's that attempted gapping in prelim test: 1169822
Number of HSP's gapped (non-prelim): 67913
length of query: 812
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 661
effective length of database: 8,816,256,848
effective search space: 5827545776528
effective search space used: 5827545776528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)