BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003531
(812 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/789 (70%), Positives = 665/789 (84%)
Query: 24 HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
H+H LS+R YIP+ +Y HP+ALLLE C+SLKELR+ILPL+ K+GL +H FQTKLVSLFC
Sbjct: 21 HRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC 80
Query: 84 KYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTY 143
+Y S+ +AARVFEPI KL+ LYHTMLKG+AK + LD A+ F +RMRYDDV PVVYN+TY
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERD 203
LLKVCGD E+R GKEIHG L+ +GFSLDLFAMTG+ NMYAKC Q+ EA K+FDRMPERD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 204 LVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHG 263
LVSWNTIVAG++QNG A +AL++V M EE + FITIVS+LPAV+ + + +GK +HG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
YAMR+GFDS+VN+STALVDMYAKCG +ETAR +FDGM RNVVSWNSMI AYV+ NP+E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
AM IFQKMLD+GV+PT+V++M ALHACADLGDLERG F+HKL +L L +VS+ NSLIS
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
MY KCK+VD AA +F KLQ +TLVSWNAMILG+AQNGR +ALNYF +MRS+ +KPD+FT
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
VSVI A+AELS+ +AKWIH +V+RSC +KNVFV TAL+DMYAKCGA+ AR +FDMM+
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
ERHVTTWN MIDGYGTHG GKAA+ELF +M +G KPN +TFL ISACSHSGLVE G+
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
F +K++Y IE MDHYGAMVDLLGRAGRLNEAWDFI +MP++P + V+GAMLGAC+IH
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 624 KNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSL 683
KNV EKAA RLFEL+PD+GGYHVLLANIY AASMW+K+ +VR M ++GL+KTPGCS+
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 684 VELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSS 743
VE+KNEVHSF+SGST HP SK+IY FLE LI IK AGYVPDTN + VE+ V+E LLS+
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLST 740
Query: 744 HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKN 803
HSEKLAI+FGLLN++ G+TIH+RKNLRVC DCHNATKYISLVTGREI+VRDM RFH FKN
Sbjct: 741 HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKN 800
Query: 804 GVCSCGDYW 812
G CSCGDYW
Sbjct: 801 GACSCGDYW 809
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 296/765 (38%), Positives = 450/765 (58%), Gaps = 6/765 (0%)
Query: 51 TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
TS+ L + II G + TKL ++ A +F + L++ ++
Sbjct: 31 TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 111 KGYAKFASLDDAVSFLIRMRYD-DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
+G++ S ++S +R D+ P Y + + + R G+ IHGQ +V+G
Sbjct: 91 RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150
Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNG-FAELALDLVT 228
+L + +V MY K ++E+A K+FDRMPE+D + WNT+++G+ +N + E
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
++E R D T++ ILPAVA + LR+G +H A + G S V T + +Y+KCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
+++ +F + ++V++N+MI Y G E ++ +F++++ G + T++ +
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
G L +H + + S++ +L ++YSK +++ A +F + K+L S
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
WNAMI GY QNG +A++ F +M+ P+ T+ ++ A A+L + KW+H LV
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
+ FE +++V TALI MYAKCG++ AR LFD+M +++ TWN MI GYG HG G+ A+
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
+F +ML P +TFLC + ACSH+GLV+EG F S+ YG EP + HY MVD+L
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
GRAG L A FI+ M IEPG +V+ +LGAC+IHK+ L + +LFELDPD GYHV
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
LL+NI++A + + A VR +K+ L K PG +L+E+ H F SG HPQ K IY
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYE 687
Query: 709 FLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRK 767
LE L +++ AGY P+T ++HDVE+ +E ++ HSE+LAIAFGL+ + PG+ I I K
Sbjct: 688 KLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIK 747
Query: 768 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
NLRVC DCH TK IS +T R I+VRD +RFH FK+GVCSCGDYW
Sbjct: 748 NLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 300/753 (39%), Positives = 460/753 (61%), Gaps = 19/753 (2%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
LV+L+ K +VF+ I ++ +++++ F + A+ M ++V P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 138 VYNYTYLLKVCGDVG---EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
+ ++ C ++ + GK++H + G L+ F + +V MY K G++ +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKV 257
Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
+ RDLV+WNT+++ QN AL+ + M EG D TI S+LPA +++
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 255 LRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
LR GK +H YA++ G D V +ALVDMY C +V + R VFDGM R + WN+MIA
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
Y + + +EA+ +F M + G+ + T+ + AC G R +H + + L
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
D + N+L+ MYS+ K+D A IF K++ + LV+WN MI GY + +AL KM
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 433 RS-----------KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA 481
++ ++KP+S T+++++P+ A LS + K IHA I++ +V V +A
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
L+DMYAKCG + +R +FD + +++V TWNV+I YG HG G+ A++L M+ KPN
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617
Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
++TF+ +ACSHSG+V+EG+ F +K DYG+EP DHY +VDLLGRAGR+ EA+ +
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677
Query: 602 QKMPIE-PGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
MP + + ++LGA +IH N+E+GE AA L +L+P+ ++VLLANIY++A +W
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737
Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
DK +VR M+++G++K PGCS +E +EVH F +G + HPQS+++ +LETL + ++
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797
Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNAT 779
GYVPDT+ + H+VE+ +E LL HSEKLAIAFG+LN+SPG+ I + KNLRVC DCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857
Query: 780 KYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
K+IS + REII+RD+ RFH FKNG CSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 36/574 (6%)
Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
+L+ + L +AV + M + P Y + LLK D+ ++ GK+IH + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 169 FSLDLFAMTG-VVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV 227
+ +D + +VN+Y KCG YK+FDR+ ER+ VSWN++++ E+AL+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 228 TRMHEEGRRGDFITIVSILPAVANVG---SLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
M +E T+VS++ A +N+ L +GK VH Y +R G + ++T LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMY 246
Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
K G++ +++++ R++V+WN+++++ + EA+ ++M+ +GVEP TI
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
L AC+ L L G +H L L + + ++L+ MY CK+V +F +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
+ + WNAMI GY+QN EAL F M S + +S TM V+PA +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
IH V++ +++ FV L+DMY++ G + A +F M +R + TWN MI GY
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 523 GKAAVELFNKM--LEGPT---------KPNDITFLCAISACSHSGLVEEG--IHYFTSLK 569
+ A+ L +KM LE KPN IT + + +C+ + +G IH + ++K
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY-AIK 545
Query: 570 KDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELG 629
+ + + A+VD+ + G L + ++P + + + ++ A +H N G
Sbjct: 546 NNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---G 599
Query: 630 EKAANRLFEL-----DPDEGGYHVLLANIYAAAS 658
++A + L + P+E V +++AA S
Sbjct: 600 QEAIDLLRMMMVQGVKPNE----VTFISVFAACS 629
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
+SR+ W ++ + V EA+ + M+ G++P N L A ADL D+E G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 361 FVHKLLDQLKLGTD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
+H + + G D V++ N+L+++Y KC +F ++ + VSWN++I
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV---IRYAKWIHALVIRSCFEKNV 476
+ AL F M +N++P SFT+VSV+ A + L + + K +HA +R E N
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236
Query: 477 FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
F++ L+ MY K G + +++ L R + TWN ++ + A+E +M+
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 537 PTKPNDITFLCAISACSHSGLVEEG 561
+P++ T + ACSH ++ G
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTG 321
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 135/268 (50%), Gaps = 16/268 (5%)
Query: 62 LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
++K GL Q L+ ++ + + A R+F + D+ ++TM+ GY +D
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 122 AVSFLIRMRYDD-----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
A+ L +M+ + + P +L C + + +GKEIH I N +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
D+ + +V+MYAKCG ++ + K+FD++P++++++WN I+ + +G + A+DL+ M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCG 288
+G + + +T +S+ A ++ G + G + Y M+ G + + +VD+ + G
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAG 668
Query: 289 RVETARLVFDGMKS--RNVVSWNSMIAA 314
R++ A + + M +W+S++ A
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 21 LHEHKHTLSQRAYIPSRIYRHPSAL----LLEVCTSLKEL---RRILPLIIKSGLCDQHL 73
LH+ ++ + + SR+ P+++ +L C +L L + I IK+ L
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 74 FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD 133
+ LV ++ K L + +VF+ IP K ++ ++ Y + +A+ L M
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 134 VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEA 192
V P + + C G + G I + + G VV++ + G+I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 193 YKMFDRMPERDLV---SWNTIVAG 213
Y++ + MP RD +W++++
Sbjct: 674 YQLMNMMP-RDFNKAGAWSSLLGA 696
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/772 (36%), Positives = 462/772 (59%), Gaps = 5/772 (0%)
Query: 46 LLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
+L++C SLK+ + + I +G +KL ++ L +A+RVF+ + +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
++ ++ AK ++ +M V Y ++ + K + + G+++HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
++ +GF +V Y K +++ A K+FD M ERD++SWN+I+ G+ NG AE
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
L + +M G D TIVS+ A+ + +G+AVH ++A F L+D
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
MY+KCG +++A+ VF M R+VVS+ SMIA Y G EA+++F++M ++G+ P T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
+ L+ CA L+ G VH+ + + LG D+ ++N+L+ MY+KC + A +FS+++
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYF-CKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
K ++SWN +I GY++N NEAL+ F + K PD T+ V+PA A LS +
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
IH ++R+ + + V +L+DMYAKCGA+ A LFD + + + +W VMI GYG HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
GK A+ LFN+M + + ++I+F+ + ACSHSGLV+EG +F ++ + IEP ++HY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
+VD+L R G L +A+ FI+ MPI P T++GA+L C+IH +V+L EK A ++FEL+P
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
+ GY+VL+ANIYA A W+++ ++R + ++GL+K PGCS +E+K V+ F +G + +P
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759
Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPG 760
+++ I FL + + GY P T ++ D E+ +E L HSEKLA+A G+++S G
Sbjct: 760 ETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG 819
Query: 761 STIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
I + KNLRVCGDCH K++S +T REI++RD +RFH FK+G CSC +W
Sbjct: 820 KIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 240/482 (49%), Gaps = 18/482 (3%)
Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGK 259
+R + NT + F ++G E A+ L+ G+ D T+ S+L A+ SL+ GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCV---SGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
V + GF N+ + L MY CG ++ A VFD +K + WN ++ + G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
+ ++ +F+KM+ GVE + T + + L + G +H + + G S+ N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
SL++ Y K ++VD A +F ++ + ++SWN++I GY NG + L+ F +M I+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
D T+VSV A+ +I + +H++ +++CF + L+DMY+KCG + +A+A+F
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVE 559
M++R V ++ MI GY GL AV+LF +M E P+ T ++ C+ L++
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 560 EGIHYFTSLKK-DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI---TVFGA 615
EG +K+ D G + + + A++D+ + G + EA +M ++ I T+ G
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 616 MLGACKIHKNVELGEKAANRLFE---LDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
C ++ + L N L E PDE +L A+ S +DK ++ + +
Sbjct: 473 YSKNCYANEALSL----FNLLLEEKRFSPDERTVACVLPAC-ASLSAFDKGREIHGYIMR 527
Query: 673 KG 674
G
Sbjct: 528 NG 529
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 310/863 (35%), Positives = 480/863 (55%), Gaps = 79/863 (9%)
Query: 3 SHSQCQLSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPL 62
SH ++S+F+ S P T P I++ C ++ +++ I
Sbjct: 14 SHQYIKVSLFSTSAPEIT--------------PPFIHK---------CKTISQVKLIHQK 50
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYH--TMLKGYAKFASLD 120
++ G+ +L + L+S + LS A + P +YH ++++ Y +
Sbjct: 51 LLSFGILTLNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCAN 109
Query: 121 DAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
+ M P Y + ++ K CG++ +R G+ H +V GF ++F +V
Sbjct: 110 KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALV 169
Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEE-GRRGDF 239
MY++C + +A K+FD M D+VSWN+I+ +A+ G ++AL++ +RM E G R D
Sbjct: 170 AMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN 229
Query: 240 ITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDG 299
IT+V++LP A++G+ +GK +H +A+ + + V LVDMYAKCG ++ A VF
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM---------------------------- 331
M ++VVSWN+M+A Y + G E+A+R+F+KM
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 332 -------LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL-------GTDVSM 377
L G++P VT++ L CA +G L G +H + + G + +
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKT--LVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
N LI MY+KCKKVD A +F L K +V+W MI GY+Q+G N+AL +M +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 436 N--IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN---VFVMTALIDMYAKCG 490
+ +P++FT+ + A A L+ +R K IHA +R+ ++N +FV LIDMYAKCG
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCG 527
Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
++ AR +FD M ++ TW ++ GYG HG G+ A+ +F++M K + +T L +
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
ACSHSG++++G+ YF +K +G+ P +HY +VDLLGRAGRLN A I++MP+EP
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
V+ A L C+IH VELGE AA ++ EL + G + LL+N+YA A W + ++R++M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SI 729
KG++K PGCS VE +F+ G HP +K IY L + IK GYVP+T ++
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFAL 767
Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
HDV+D +++LL HSEKLA+A+G+L + G+ I I KNLRVCGDCH A Y+S + +
Sbjct: 768 HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHD 827
Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
II+RD RFH FKNG CSC YW
Sbjct: 828 IILRDSSRFHHFKNGSCSCKGYW 850
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 298/771 (38%), Positives = 465/771 (60%), Gaps = 11/771 (1%)
Query: 46 LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
L CT+L+ + + ++ S KLV+L+C +++ A F+ I ++
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 106 YHTMLKGYAKFASLDDAVS-FLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
++ M+ GY + + + + F + M + P + +LK C V + G +IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176
Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
+ GF D++ ++++Y++ + A +FD MP RD+ SWN +++G+ Q+G A+ AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
L + R D +T+VS+L A G G +H Y+++ G +S + VS L+D+Y
Sbjct: 237 TLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
A+ GR+ + VFD M R+++SWNS+I AY P A+ +FQ+M ++P +T++
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 345 EALHACADLGDLERGIFVHKL-LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
+ LGD+ V L + D+++ N+++ MY+K VD A +F+ L
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKW 462
++SWN +I GYAQNG +EA+ + M + I + T VSV+PA ++ +R
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
+H ++++ +VFV+T+L DMY KCG + A +LF + + WN +I +G HG
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
G+ AV LF +ML+ KP+ ITF+ +SACSHSGLV+EG F ++ DYGI P + HYG
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
MVD+ GRAG+L A FI+ M ++P +++GA+L AC++H NV+LG+ A+ LFE++P+
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
GYHVLL+N+YA+A W+ + ++R+I KGL+KTPG S +E+ N+V FY+G+ HP
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM 712
Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
+ +Y L L ++K GYVPD + DVED +E++L SHSE+LAIAF L+ + +
Sbjct: 713 YEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKT 772
Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
TI I KNLRVCGDCH+ TK+IS +T REIIVRD +RFH FKNGVCSCGDYW
Sbjct: 773 TIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/736 (38%), Positives = 450/736 (61%), Gaps = 7/736 (0%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY-DDVAP 136
+++F ++ +L DA VF + ++ ++ ++ GYAK D+A+ RM + V P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 137 VVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMF 196
VY + +L+ CG + ++ RGKE+H ++ G+ LD+ + ++ MY KCG ++ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
DRMP RD++SWN +++G+ +NG L+L M D +T+ S++ A +G R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV 316
+G+ +H Y + GF ++V +L MY G A +F M+ +++VSW +MI+ Y
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 317 EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVS 376
P++A+ ++ M V+P +T+ L ACA LGDL+ G+ +HKL + +L + V
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKN 436
+ N+LI+MYSKCK +D+A DIF + K ++SW ++I G N R EAL + +M+
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MT 493
Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
++P++ T+ + + A A + + K IHA V+R+ + F+ AL+DMY +CG + TA
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 497 ALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSG 556
+ F+ ++ VT+WN+++ GY G G VELF++M++ +P++ITF+ + CS S
Sbjct: 554 SQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ 612
Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
+V +G+ YF+ + +DYG+ P + HY +VDLLGRAG L EA FIQKMP+ P V+GA+
Sbjct: 613 MVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
L AC+IH ++LGE +A +FELD GY++LL N+YA W ++AKVR +M++ GL
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY--VPDTNSIHDVED 734
GCS VE+K +VH+F S HPQ+K I T LE +++ G + +++S+ + E
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETE- 790
Query: 735 YVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 794
++ + HSE+ AIAFGL+N+ PG I + KNL +C +CH+ K+IS REI VRD
Sbjct: 791 ISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRD 850
Query: 795 MHRFHCFKNGVCSCGD 810
FH FK+G CSCGD
Sbjct: 851 AEHFHHFKDGECSCGD 866
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 254/492 (51%), Gaps = 7/492 (1%)
Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
L G L++A+ L M+ VA + L+++C G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
SL + + M+ + G + +A+ +F +M ER+L SWN +V G+A+ G+ + A+ L R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 230 M-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
M G + D T +L + L GK VH + +R G++ ++V AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
V++ARL+FD M R+++SWN+MI+ Y E G E + +F M V+P +T+ +
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
AC LGD G +H + D+S+ NSL MY A +FS+++ K +VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVI 468
W MI GY N ++A++ + M ++KPD T+ +V+ A A L + +H L I
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
++ V V LI+MY+KC + A +F + ++V +W +I G + A+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL- 484
Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVD 586
+F + ++ +PN IT A++AC+ G + G IH L+ G++ + + A++D
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGVGLDDFLPN--ALLD 541
Query: 587 LLGRAGRLNEAW 598
+ R GR+N AW
Sbjct: 542 MYVRCGRMNTAW 553
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 2/345 (0%)
Query: 57 RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
R I +I +G L ++ S +A ++F + K + TM+ GY
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
D A+ M D V P +L C +G++ G E+H I +
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
++NMY+KC I++A +F +P ++++SW +I+AG N AL + +M + +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQ 495
Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
+ IT+ + L A A +G+L GK +H + +R G + AL+DMY +CGR+ TA
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDL 356
F+ K ++V SWN ++ Y E G + +F +M+ V P +T + L C+ +
Sbjct: 556 FNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 357 ERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
+G+ ++ + ++ ++ + + ++ A K+
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/658 (41%), Positives = 420/658 (63%), Gaps = 4/658 (0%)
Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
K+IH +L+V G F +T +++ + G I A ++FD +P + WN I+ G+++N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
+ AL + + M D T +L A + + L++G+ VH R GFD+ V V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 278 TALVDMYAKCGRVETARLVFDGMK--SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
L+ +YAKC R+ +AR VF+G+ R +VSW ++++AY + G P EA+ IF +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
V+P V ++ L+A L DL++G +H + ++ L + + SL +MY+KC +V A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
+F K++ L+ WNAMI GYA+NG EA++ F +M +K+++PD+ ++ S I A A++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 456 VIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMID 515
+ A+ ++ V RS + +VF+ +ALIDM+AKCG+V AR +FD +R V W+ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 516 GYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
GYG HG + A+ L+ M G PND+TFL + AC+HSG+V EG +F + D+ I
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKIN 456
Query: 576 PVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANR 635
P HY ++DLLGRAG L++A++ I+ MP++PG+TV+GA+L ACK H++VELGE AA +
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 636 LFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYS 695
LF +DP G++V L+N+YAAA +WD++A+VR M++KGL K GCS VE++ + +F
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 696 GSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGL 754
G HP+ + I +E + +K G+V + + S+HD+ D E L SHSE++AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636
Query: 755 LNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+++ G+ + I KNLR C +CH ATK IS + REI+VRD +RFH FK+GVCSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 257 bits (656), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 268/495 (54%), Gaps = 7/495 (1%)
Query: 44 ALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLD 103
A L++ T +L++I ++ GL TKL+ + ++ A +VF+ +P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 104 ALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQ 163
++ +++GY++ DA+ M+ V+P + + +LLK C + ++ G+ +H Q
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 164 LIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD--RMPERDLVSWNTIVAGFAQNGFAE 221
+ GF D+F G++ +YAKC ++ A +F+ +PER +VSW IV+ +AQNG
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
AL++ ++M + + D++ +VS+L A + L+ G+++H ++ G + ++ +L
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
MYAKCG+V TA+++FD MKS N++ WN+MI+ Y + G EA+ +F +M+++ V P +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
+I A+ ACA +G LE+ +++ + + DV ++++LI M++KC V+ A +F +
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
+ +V W+AMI+GY +GR EA++ + M + P+ T + ++ A ++R
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTH 520
W + +ID+ + G + A + M + VT W ++ H
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 521 ---GLGK-AAVELFN 531
LG+ AA +LF+
Sbjct: 505 RHVELGEYAAQQLFS 519
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 292/785 (37%), Positives = 453/785 (57%), Gaps = 20/785 (2%)
Query: 46 LLEVCTSLKELRR---ILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIP--D 100
LL+ C ++ R + +I+ + + L+SL+ K + A VFE +
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 101 KLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE 159
K D + + M+ Y DA+ + + P Y YT +++ C + + G+
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 160 IHGQLIVNG-FSLDLFAMTGVVNMYAKC-GQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
G L+ G F D+ +++M+ K E AYK+FD+M E ++V+W ++ Q
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
GF A+ M G D T+ S+ A A + +L +GK +H +A+R+G + +V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVE 305
Query: 278 TALVDMYAKC---GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN-PEEAMRIFQKMLD 333
+LVDMYAKC G V+ R VFD M+ +V+SW ++I Y++ N EA+ +F +M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 334 QG-VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVD 392
QG VEP + T A AC +L D G V + L ++ S+ NS+ISM+ K +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 393 RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA 452
A F L K LVS+N + G +N +A ++ + + +FT S++ +A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 453 ELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNV 512
+ IR + IH+ V++ N V ALI MY+KCG++ TA +F+ M R+V +W
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 513 MIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
MI G+ HG +E FN+M+E KPN++T++ +SACSH GLV EG +F S+ +D+
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 573 GIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKA 632
I+P M+HY MVDLL RAG L +A++FI MP + + V+ LGAC++H N ELG+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 633 ANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHS 692
A ++ ELDP+E ++ L+NIYA A W++ ++R M+++ L K GCS +E+ +++H
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 693 FYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV----EDYVQENLLSSHSEK 747
FY G T HP + +IY L+ LI EIK GYVPDT+ + H + ++ +E LL HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 748 LAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCS 807
+A+AFGL+++S + + KNLRVCGDCHNA KYIS V+GREI++RD++RFH FK+G CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 808 CGDYW 812
C DYW
Sbjct: 846 CNDYW 850
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 240/490 (48%), Gaps = 14/490 (2%)
Query: 119 LDDAVSFLIRMRYDDVAPV-VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
L AVS L M D + P+ ++ LLK C + R GK +H +LI D
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 178 GVVNMYAKCG---QIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG 234
++++Y+K G + E+ ++ R +RD+VSW+ ++A + NG A+ + E G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 235 RRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAG-FDSIVNVSTALVDMYAKC-GRVET 292
+ +++ A +N + +G+ G+ M+ G F+S V V +L+DM+ K E
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 293 ARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACAD 352
A VFD M NVV+W MI ++ G P EA+R F M+ G E T+ ACA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 353 LGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCK---KVDRAADIFSKLQGKTLVSW 409
L +L G +H + L DV SL+ MY+KC VD +F +++ +++SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 410 NAMILGYAQNGRV-NEALNYFCKMRSK-NIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
A+I GY +N + EA+N F +M ++ +++P+ FT S A LS R K +
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 468 IRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
+ N V ++I M+ K + A+ F+ ++E+++ ++N +DG + + A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
+L +++ E + TF +S ++ G + +G + + K G+ A++ +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISM 518
Query: 588 LGRAGRLNEA 597
+ G ++ A
Sbjct: 519 YSKCGSIDTA 528
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGIFVHKLLD 367
+ +I ++ G+ A+ M G+ P + VT L +C D G VH L
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ---GKTLVSWNAMILGYAQNGRVNE 424
+ + D + NSLIS+YSK +A D+F ++ + +VSW+AM+ Y NGR +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC-FEKNVFVMTALI 483
A+ F + + P+ + +VI A + + + ++++ FE +V V +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 484 DMYAKC-GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
DM+ K + A +FD M+E +V TW +MI G + A+ F M+ + +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 543 ITFLCAISACSH 554
T SAC+
Sbjct: 270 FTLSSVFSACAE 281
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 287/809 (35%), Positives = 467/809 (57%), Gaps = 40/809 (4%)
Query: 42 PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKY---NSLSDAARVFEPI 98
PS+L + C ++ EL+ + K GL + TKLV+ C+ SLS A VFE
Sbjct: 36 PSSL--KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 99 PDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
+Y+++++GYA ++A+ +RM ++P Y + + L C G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
+IHG ++ G++ DLF +V+ YA+CG+++ A K+FD M ER++VSW +++ G+A+
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 218 GFAELALDLVTRM-HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
FA+ A+DL RM +E + +T+V ++ A A + L G+ V+ + +G + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
+ALVDMY KC ++ A+ +FD + N+ N+M + YV G EA+ +F M+D GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
P ++++ A+ +C+ L ++ G H + + + ++ N+LI MY KC + D A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVN-------------------------------EA 425
IF ++ KT+V+WN+++ GY +NG V+ EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 426 LNYFCKMRSKN-IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
+ FC M+S+ + D TM+S+ A L + AKWI+ + ++ + +V + T L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
M+++CG +A ++F+ + R V+ W I G + A+ELF+ M+E KP+ +
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
F+ A++ACSH GLV++G F S+ K +G+ P HYG MVDLLGRAG L EA I+ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
P+EP ++ ++L AC++ NVE+ AA ++ L P+ G +VLL+N+YA+A W+ +A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
KVR M++KGL+K PG S ++++ + H F SG HP+ I L+ + G+VP
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753
Query: 725 D-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
D +N + DV++ + +LS HSEKLA+A+GL++S+ G+TI I KNLRVC DCH+ K+ S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813
Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
V REII+RD +RFH + G CSCGD+W
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDFW 842
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/694 (37%), Positives = 408/694 (58%), Gaps = 38/694 (5%)
Query: 156 RGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFA 215
+ K++H Q I SL + + V+++Y + EA +F + +++W +++ F
Sbjct: 23 QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
AL M GR D S+L + + LR G++VHG+ +R G D +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 276 VSTALVDMYAK---------CGRV---------------------------ETARLVFDG 299
AL++MYAK G V ++ R VF+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 300 MKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG 359
M ++VVS+N++IA Y + G E+A+R+ ++M ++P + T+ L ++ D+ +G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 360 IFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQN 419
+H + + + +DV + +SL+ MY+K +++ + +FS+L + +SWN+++ GY QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 420 GRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM 479
GR NEAL F +M + +KP + SVIPA A L+ + K +H V+R F N+F+
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 480 TALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTK 539
+AL+DMY+KCG + AR +FD MN +W +I G+ HG G AV LF +M K
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 540 PNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
PN + F+ ++ACSH GLV+E YF S+ K YG+ ++HY A+ DLLGRAG+L EA++
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 600 FIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASM 659
FI KM +EP +V+ +L +C +HKN+EL EK A ++F +D + G +VL+ N+YA+
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 660 WDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKA 719
W ++AK+R M KKGL+K P CS +E+KN+ H F SG HP +I FL+ ++++++
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Query: 720 AGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
GYV DT+ + HDV++ + LL HSE+LA+AFG++N+ PG+TI + KN+R+C DCH A
Sbjct: 622 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681
Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
K+IS +T REIIVRD RFH F G CSCGDYW
Sbjct: 682 IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 243/487 (49%), Gaps = 38/487 (7%)
Query: 72 HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
H + ++S++ L +A +F+ + + ++++ + + A++ + MR
Sbjct: 39 HTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA 98
Query: 132 DDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK------ 185
P + +LK C + ++R G+ +HG ++ G DL+ ++NMYAK
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 186 ---CGQ---------------------------IEEAYKMFDRMPERDLVSWNTIVAGFA 215
G I+ ++F+ MP +D+VS+NTI+AG+A
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
Q+G E AL +V M + D T+ S+LP + + GK +HGY +R G DS V
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQG 335
+ ++LVDMYAK R+E + VF + R+ +SWNS++A YV+ G EA+R+F++M+
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 338
Query: 336 VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
V+P V + ACA L L G +H + + G+++ + ++L+ MYSKC + A
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398
Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
IF ++ VSW A+I+G+A +G +EA++ F +M+ + +KP+ V+V+ A + +
Sbjct: 399 KIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
Query: 456 VIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVM 513
++ A + +++ + + A+ D+ + G + A M E + W+ +
Sbjct: 459 LVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
Query: 514 IDGYGTH 520
+ H
Sbjct: 519 LSSCSVH 525
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 57 RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
+ I +I+ G+ + LV ++ K + D+ RVF + + +++++ GY +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAM 176
++A+ +M V P ++ ++ C + + GK++HG ++ GF ++F
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 177 TGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
+ +V+MY+KCG I+ A K+FDRM D VSW I+ G A +G A+ L M +G +
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGRVETARL 295
+ + V++L A ++VG + + G + + A+ D+ + G++E A
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 296 VFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKML 332
M S W++++++ N E A ++ +K+
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 434/771 (56%), Gaps = 4/771 (0%)
Query: 46 LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
+L C ++ L ++ L++K G LVSL+ +L A +F + +
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
Y+T++ G ++ + A+ RM D + P L+ C G + RG+++H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
GF+ + ++N+YAKC IE A F ++V WN ++ +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
+ + +M E + T SIL +G L +G+ +H ++ F V + L+D
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
MYAK G+++TA + ++VVSW +MIA Y + ++A+ F++MLD+G+ V
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
+ A+ ACA L L+ G +H +D+ N+L+++YS+C K++ + F + +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
++WNA++ G+ Q+G EAL F +M + I ++FT S + A +E + ++ K
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
+HA++ ++ ++ V ALI MYAKCG++ A F ++ ++ +WN +I+ Y HG
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYG 582
G A++ F++M+ +PN +T + +SACSH GLV++GI YF S+ +YG+ P +HY
Sbjct: 774 GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 583 AMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPD 642
+VD+L RAG L+ A +FIQ+MPI+P V+ +L AC +HKN+E+GE AA+ L EL+P+
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 643 EGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQ 702
+ +VLL+N+YA + WD R M++KG++K PG S +E+KN +HSFY G HP
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 703 SKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
+ I+ + + L GYV D S +++++ ++ ++ HSEKLAI+FGLL+
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013
Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
I++ KNLRVC DCH K++S V+ REIIVRD +RFH F+ G CSC DYW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 275/556 (49%), Gaps = 5/556 (0%)
Query: 46 LLEVC----TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
+LE C + + +I I+ GL D + L+ L+ + + A RVF+ + K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
+ + M+ G +K +A+ M + P Y ++ +L C + + G+++H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
G ++ GFS D + +V++Y G + A +F M +RD V++NT++ G +Q G+ E
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
A++L RMH +G D T+ S++ A + G+L G+ +H Y + GF S + AL+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
++YAKC +ETA F + NVV WN M+ AY + + RIF++M + + P
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
T L C LGDLE G +H + + + + + LI MY+K K+D A DI +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
GK +VSW MI GY Q ++AL F +M + I+ D + + + A A L ++ +
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
IHA S F ++ AL+ +Y++CG + + F+ WN ++ G+ G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
+ A+ +F +M N+ TF A+ A S + +++G + K G + +
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVC 730
Query: 582 GAMVDLLGRAGRLNEA 597
A++ + + G +++A
Sbjct: 731 NALISMYAKCGSISDA 746
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 278/560 (49%), Gaps = 10/560 (1%)
Query: 46 LLEVCT----SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
LLE C SL E R++ I+K GL KL + L A +VF+ +P++
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC-GDVGEIRRGKEI 160
++ M+K A + + +RM ++V P ++ +L+ C G ++I
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 161 HGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFA 220
H +++ G ++++Y++ G ++ A ++FD + +D SW +++G ++N
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 221 ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTAL 280
A+ L M+ G S+L A + SL IG+ +HG ++ GF S V AL
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 281 VDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
V +Y G + +A +F M R+ V++N++I + G E+AM +F++M G+EP +
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 341 VTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
T+ + AC+ G L RG +H +L ++ + +L+++Y+KC ++ A D F +
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 401 LQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA 460
+ + +V WN M++ Y + + F +M+ + I P+ +T S++ L +
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 461 KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTH 520
+ IH+ +I++ F+ N +V + LIDMYAK G + TA + + V +W MI GY +
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 521 GLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVM 578
A+ F +ML+ + +++ A+SAC+ ++EG IH + G +
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS---GFSSDL 626
Query: 579 DHYGAMVDLLGRAGRLNEAW 598
A+V L R G++ E++
Sbjct: 627 PFQNALVTLYSRCGKIEESY 646
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 221/471 (46%), Gaps = 5/471 (1%)
Query: 134 VAPVVYNYTYLLKVCGDV-GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
+ P +LL+ C G + G+++H Q++ G + + + Y G + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV-AN 251
+K+FD MPER + +WN ++ A L RM E + T +L A
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
+ + + +H + G V L+D+Y++ G V+ AR VFDG++ ++ SW +M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
I+ + EA+R+F M G+ PT L AC + LE G +H L+ +L
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
+D + N+L+S+Y + A IFS + + V++N +I G +Q G +A+ F +
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
M ++PDS T+ S++ A + + + +HA + F N + AL+++YAKC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
+ TA F +V WNVM+ YG + + +F +M PN T+ +
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 552 CSHSGLVEEGIHYFTS-LKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
C G +E G + +K ++ + + ++D+ + G+L+ AWD +
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 548
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 173/372 (46%), Gaps = 11/372 (2%)
Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
GSL G+ +H ++ G DS +S L D Y G + A VFD M R + +WN MI
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC---ADLGDLERGIFVHKLLDQL 369
E +F +M+ + V P T L AC + D+ I L L
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
+ T V N LI +YS+ VD A +F L+ K SW AMI G ++N EA+ F
Sbjct: 219 RDSTVV--CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
C M I P + SV+ A ++ + + +H LV++ F + +V AL+ +Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
G + +A +F M++R T+N +I+G G G+ A+ELF +M +P+ T +
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 550 SACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
ACS G + G +H +T+ G GA+++L + + A D+ + +E
Sbjct: 397 VACSADGTLFRGQQLHAYTT---KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 608 PGITVFGAMLGA 619
+ ++ ML A
Sbjct: 454 -NVVLWNVMLVA 464
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/699 (37%), Positives = 416/699 (59%), Gaps = 43/699 (6%)
Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYA--KCGQIEEAYKMFDRMPERDLVSWNTIV 211
+R+ K+ HG +I G D ++ + + M A +E A K+FD +P+ + +WNT++
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 212 AGFAQNGFAELA----LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
+A L+ LD+V+ E + T ++ A A V SL +G+++HG A++
Sbjct: 103 RAYASGPDPVLSIWAFLDMVS---ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 268 AGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
+ S V V+ +L+ Y CG +++A VF +K ++VVSWNSMI +V+ G+P++A+ +
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
F+KM + V+ ++VT++ L ACA + +LE G V +++ ++ ++++ N+++ MY+K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 388 CKKVDRAADIFSKLQ-------------------------------GKTLVSWNAMILGY 416
C ++ A +F ++ K +V+WNA+I Y
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 417 AQNGRVNEALNYFCKMR-SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
QNG+ NEAL F +++ KN+K + T+VS + A A++ + +WIH+ + + N
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
V +ALI MY+KCG + +R +F+ + +R V W+ MI G HG G AV++F KM E
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
KPN +TF ACSH+GLV+E F ++ +YGI P HY +VD+LGR+G L
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
Query: 596 EAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYA 655
+A FI+ MPI P +V+GA+LGACKIH N+ L E A RL EL+P G HVLL+NIYA
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579
Query: 656 AASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLID 715
W+ ++++R M GL+K PGCS +E+ +H F SG HP S+++Y L +++
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 639
Query: 716 EIKAAGYVPDTNSIHDV--EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
++K+ GY P+ + + + E+ ++E L+ HSEKLAI +GL+++ I + KNLRVCG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699
Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
DCH+ K IS + REIIVRD +RFH F+NG CSC D+W
Sbjct: 700 DCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 255/491 (51%), Gaps = 43/491 (8%)
Query: 9 LSVFTNSTPTQTLHEHKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGL 68
+++F+ + P + + + RH S L+E C SL++L++ +I++G
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHIS--LIERCVSLRQLKQTHGHMIRTGT 58
Query: 69 CDQHLFQTKLVSL--FCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV--- 123
+KL ++ + SL A +VF+ IP ++T+++ YA S D V
Sbjct: 59 FSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA---SGPDPVLSI 115
Query: 124 -SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
+FL + P Y + +L+K +V + G+ +HG + + D+F +++
Sbjct: 116 WAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHC 175
Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
Y CG ++ A K+F + E+D+VSWN+++ GF Q G + AL+L +M E + +T+
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK- 301
V +L A A + +L G+ V Y + + ++ A++DMY KCG +E A+ +FD M+
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 302 ------------------------------SRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
+++V+WN++I+AY + G P EA+ +F ++
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 332 -LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
L + ++ +T++ L ACA +G LE G ++H + + + + +T++LI MYSKC
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 391 VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
++++ ++F+ ++ + + W+AMI G A +G NEA++ F KM+ N+KP+ T +V A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 451 LAELSVIRYAK 461
+ ++ A+
Sbjct: 476 CSHTGLVDEAE 486
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/752 (34%), Positives = 437/752 (58%), Gaps = 3/752 (0%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
I+ G LV ++ + L+ A +VF+ +P + +++++ GY+ ++A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
+ ++ + P + + +L G++ +++G+ +HG + +G + + G+V M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
Y K + +A ++FD M RD VS+NT++ G+ + E ++ + ++ + D +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-PDLLTV 310
Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
S+L A ++ L + K ++ Y ++AGF V L+D+YAKCG + TAR VF+ M+
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
++ VSWNS+I+ Y++ G+ EAM++F+ M+ + ++T + + L DL+ G +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
H + + D+S++N+LI MY+KC +V + IFS + V+WN +I + G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
L +MR + PD T + +P A L+ R K IH ++R +E + + AL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
I+MY+KCG + + +F+ M+ R V TW MI YG +G G+ A+E F M + P+
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQ 602
+ F+ I ACSHSGLV+EG+ F +K Y I+P+++HY +VDLL R+ ++++A +FIQ
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 603 KMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDK 662
MPI+P +++ ++L AC+ ++E E+ + R+ EL+PD+ GY +L +N YAA WDK
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 663 LAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGY 722
++ +R ++ K + K PG S +E+ VH F SG PQS+ IY LE L + GY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Query: 723 VPDTNSIHD--VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
+PD + E+ + L+ HSE+LAIAFGLLN+ PG+ + + KNLRVCGDCH TK
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 781 YISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
IS + GREI+VRD +RFH FK+G CSC D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 323/617 (52%), Gaps = 15/617 (2%)
Query: 47 LEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPI-PDKLDAL 105
L ++L ELRRI L+I GL F KL+ + + + + VF + P K L
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
++++++ ++K +A+ F ++R V+P Y + ++K C + + G ++ Q++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
GF DLF +V+MY++ G + A ++FD MP RDLVSWN++++G++ +G+ E AL+
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
+ + D T+ S+LPA N+ ++ G+ +HG+A+++G +S+V V+ LV MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
K R AR VFD M R+ VS+N+MI Y++ EE++R+F + LDQ +P +T+
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSS 312
Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
L AC L DL +++ + + + ++ N LI +Y+KC + A D+F+ ++ K
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
VSWN++I GY Q+G + EA+ F M + D T + +I L+ +++ K +H+
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
I+S ++ V ALIDMYAKCG VG + +F M TWN +I G
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
+++ +M + P+ TFL + C+ G L + +G E + A++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALI 551
Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELD----- 640
++ + G L + ++M +T G M+ A ++ GEKA +++
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTG-MIYAYGMYGE---GEKALETFADMEKSGIV 607
Query: 641 PDEGGYHVLLANIYAAA 657
PD V +A IYA +
Sbjct: 608 PDS---VVFIAIIYACS 621
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 199/406 (49%), Gaps = 17/406 (4%)
Query: 242 IVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMK 301
I L + +N+ LR +H + G DS S L+D Y+ ++ VF +
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 302 -SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
++NV WNS+I A+ + G EA+ + K+ + V P T + ACA L D E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
V++ + + +D+ + N+L+ MYS+ + RA +F ++ + LVSWN++I GY+ +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
EAL + ++++ I PDSFT+ SV+PA L V++ + +H ++S V V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
L+ MY K AR +FD M+ R ++N MI GY + + +V +F + L+ KP
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKP 305
Query: 541 NDITFLCAISACSH-SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD 599
+ +T + AC H L Y LK + +E + + ++D+ + G + A D
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARD 363
Query: 600 FIQKM---------PIEPGITVFGAMLGACKIHKNVELGEKAANRL 636
M I G G ++ A K+ K + + E+ A+ +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 301/810 (37%), Positives = 462/810 (57%), Gaps = 33/810 (4%)
Query: 28 LSQRAYIPSRIYRHPSALLLEVCTSLKE-----LRRILPLIIKSGLCDQHLFQTKLVSLF 82
S Y SR + L+ SL E L +I+ I KSGL + LVS F
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 83 CKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMR-YDDVAPVVYNY 141
K SLS A +VF + + + ++ G + ++A + M DV+P +Y
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP--ESY 311
Query: 142 TYLLK------VCGDVGEIRRGKEIHGQLIVNGFSLDLFAM-TGVVNMYAKCGQIEEAYK 194
LL + +VG +++G+E+HG +I G + + G+VNMYAKCG I +A +
Sbjct: 312 VILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVA 250
+F M ++D VSWN+++ G QNG A++ M RR D + T++S L + A
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM----RRHDILPGSFTLISSLSSCA 426
Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
++ ++G+ +HG +++ G D V+VS AL+ +YA+ G + R +F M + VSWNS
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 311 MIAAYVEGGNP-EEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
+I A EA+ F G + +T L A + L E G +H L +
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546
Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNY 428
+ + + N+LI+ Y KC ++D IFS++ + + V+WN+MI GY N + +AL+
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606
Query: 429 FCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAK 488
M + DSF +V+ A A ++ + +HA +R+C E +V V +AL+DMY+K
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666
Query: 489 CGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKM-LEGPTKPNDITFLC 547
CG + A F+ M R+ +WN MI GY HG G+ A++LF M L+G T P+ +TF+
Sbjct: 667 CGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726
Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIE 607
+SACSH+GL+EEG +F S+ YG+ P ++H+ M D+LGRAG L++ DFI+KMP++
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786
Query: 608 PGITVFGAMLGAC--KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
P + ++ +LGAC + ELG+KAA LF+L+P+ +VLL N+YAA W+ L K
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
R M+ ++K G S V +K+ VH F +G HP + IY L+ L +++ AGYVP
Sbjct: 847 ARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Query: 726 TN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR--KNLRVCGDCHNATKYI 782
T +++D+E +E +LS HSEKLA+AF +L + ST+ IR KNLRVCGDCH+A KYI
Sbjct: 907 TGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965
Query: 783 SLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
S + GR+II+RD +RFH F++G CSC D+W
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 234/480 (48%), Gaps = 14/480 (2%)
Query: 151 VGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTI 210
VG + H +L N D++ ++N Y + G A K+FD MP R+ VSW I
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 211 VAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI--GKAVHGYAMRA 268
V+G+++NG + AL + M +EG + VS+L A +GS+ I G+ +HG +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 269 GFDSIVNVSTALVDMYAKC-GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
+ VS L+ MY KC G V A F ++ +N VSWNS+I+ Y + G+ A RI
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG--TDVSMTNSLISMY 385
F M G PT T + L + + + + K G TD+ + + L+S +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 386 SKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK-NIKPDSFT- 443
+K + A +F++++ + V+ N +++G + EA F M S ++ P+S+
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 444 MVSVIP--ALAELSVIRYAKWIHALVIRSCF-EKNVFVMTALIDMYAKCGAVGTARALFD 500
++S P +LAE ++ + +H VI + + V + L++MYAKCG++ AR +F
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
M ++ +WN MI G +G AVE + M P T + ++S+C+ +
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 561 GIH-YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
G + SLK GI+ + A++ L G LNE MP ++ + +++GA
Sbjct: 434 GQQIHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 262/546 (47%), Gaps = 28/546 (5%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
L++ + + A +VF+ +P + + ++ GY++ +A+ FL M + +
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSN 101
Query: 138 VYNYTYLLKVCGDVGE--IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC-GQIEEAYK 194
Y + +L+ C ++G I G++IHG + +++D +++MY KC G + A
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161
Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
F + ++ VSWN+I++ ++Q G A + + M +G R T S++ ++
Sbjct: 162 AFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221
Query: 255 --LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
+R+ + + ++G + + V + LV +AK G + AR VF+ M++RN V+ N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 313 AAYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEAL---HACADLGDLERGIFVH----- 363
V EEA ++F M V P + I+ + ++ A+ L++G VH
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 364 -KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
L+D + V + N L++MY+KC + A +F + K VSWN+MI G QNG
Sbjct: 342 TGLVDFM-----VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
EA+ + MR +I P SFT++S + + A L + + IH ++ + NV V AL
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYG--THGLGKAAVELFNKMLEGPTKP 540
+ +YA+ G + R +F M E +WN +I L +A V N G K
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG-QKL 515
Query: 541 NDITFLCAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAW 598
N ITF +SA S E G IH +LK + E ++ A++ G+ G ++
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQIHGL-ALKNNIADEATTEN--ALIACYGKCGEMDGCE 572
Query: 599 DFIQKM 604
+M
Sbjct: 573 KIFSRM 578
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/759 (35%), Positives = 437/759 (57%), Gaps = 8/759 (1%)
Query: 62 LIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDD 121
L++K+GL + LVS + + ++DA ++F+ +P++ +++M++ ++ ++
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 122 AVSFLIRMRYDD----VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
+ L M ++ P V +L VC EI GK +HG + +L
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN 331
Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-- 235
+++MY+KCG I A +F +++VSWNT+V GF+ G D++ +M G
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 236 RGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARL 295
+ D +TI++ +P + L K +H Y+++ F V+ A V YAKCG + A+
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 296 VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGD 355
VF G++S+ V SWN++I + + +P ++ +M G+ P + T+ L AC+ L
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
L G VH + + L D+ + S++S+Y C ++ +F ++ K+LVSWN +I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
Y QNG + AL F +M I+ +M+ V A + L +R + HA ++ E +
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
F+ +LIDMYAK G++ + +F+ + E+ +WN MI GYG HGL K A++LF +M
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 691
Query: 536 GPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLN 595
P+D+TFL ++AC+HSGL+ EG+ Y +K +G++P + HY ++D+LGRAG+L+
Sbjct: 692 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 751
Query: 596 EAWDFI-QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
+A + ++M E + ++ ++L +C+IH+N+E+GEK A +LFEL+P++ +VLL+N+Y
Sbjct: 752 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
A W+ + KVR M + L+K GCS +EL +V SF G + I + L
Sbjct: 812 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE 871
Query: 715 DEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
+I GY PDT S+ HD+ + + L HSEKLA+ +GL+ +S G+TI + KNLR+C
Sbjct: 872 MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICV 931
Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
DCHNA K IS V REI+VRD RFH FKNGVCSCGDYW
Sbjct: 932 DCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 287/527 (54%), Gaps = 11/527 (2%)
Query: 38 IYRHPSALLLEVCTSLKEL---RRILPLIIKSG-LCDQHLFQTKLVSLFCKYNSLSDAAR 93
+ R LLL+ K++ R+I L+ S L + + T++++++ S D+
Sbjct: 82 LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141
Query: 94 VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRM-RYDDVAPVVYNYTYLLKVCGDVG 152
VF+ + K ++ ++ Y++ D+ + I M D+ P + Y ++K C +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
++ G +HG ++ G D+F +V+ Y G + +A ++FD MPER+LVSWN+++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFI----TIVSILPAVANVGSLRIGKAVHGYAMRA 268
F+ NGF+E + L+ M EE G F+ T+V++LP A + +GK VHG+A++
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
D + ++ AL+DMY+KCG + A+++F ++NVVSWN+M+ + G+ +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 329 QKMLDQG--VEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
++ML G V+ VTI+ A+ C L +H + + + + N+ ++ Y+
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441
Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
KC + A +F ++ KT+ SWNA+I G+AQ+ +L+ +M+ + PDSFT+ S
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
++ A ++L +R K +H +IR+ E+++FV +++ +Y CG + T +ALFD M ++
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
+ +WN +I GY +G A+ +F +M+ + I+ + ACS
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 52 SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
SL+ R +K L D L+ ++ K S++ +++VF + +K A ++ M+
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVN-GFS 170
GY +A+ M+ P + +L C G I G Q+ + G
Sbjct: 672 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMF--DRMPERDLVSWNTIVA 212
+L V++M + GQ+++A ++ + E D+ W ++++
Sbjct: 732 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/707 (38%), Positives = 400/707 (56%), Gaps = 43/707 (6%)
Query: 113 YAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLL-KVCGDVGEIRRGKEIHGQLIVNGFSL 171
+ KF S S L ++ D +P +LL +V +IR + +H ++I+
Sbjct: 16 FRKFQS-RKVSSSLPKLELDQKSP--QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRC 72
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
+ ++ YA + A K+FD +PER+++ N ++ + NGF + + M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
R D T +L A + G++ IG+ +HG A + G S + V LV MY KCG +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
ARLV D M R+VVSWNS++ Y + ++A+ + ++M E++
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-------------ESVKISH 239
Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
D G + L VS T + MY K D+F K+ K+LVSWN
Sbjct: 240 DAGTMA------------SLLPAVSNTTTENVMYVK--------DMFFKMGKKSLVSWNV 279
Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
MI Y +N EA+ + +M + +PD+ ++ SV+PA + S + K IH + R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
N+ + ALIDMYAKCG + AR +F+ M R V +W MI YG G G AV LF+
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
K+ + P+ I F+ ++ACSH+GL+EEG F + Y I P ++H MVDLLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
G++ EA+ FIQ M +EP V+GA+LGAC++H + ++G AA++LF+L P++ GY+VLL+
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLE 711
NIYA A W+++ +R IM+ KGL+K PG S VE+ +H+F G HPQS IY L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579
Query: 712 TLIDEIKAAGYVPDTNS-IHDVEDYVQENLLSSHSEKLAIAFGLLNS-----SPGSTIHI 765
L+ ++K GYVPD+ S +HDVE+ +E L+ HSEKLAI F L+N+ +TI I
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRI 639
Query: 766 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
KNLR+CGDCH A K IS +T REII+RD +RFH F+ GVCSCGDYW
Sbjct: 640 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 230/485 (47%), Gaps = 51/485 (10%)
Query: 46 LLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL 105
+L+ ++ LR + II L KL+ + ++ A +VF+ IP++ +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
+ M++ Y + V M +V P Y + +LK C G I G++IHG
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167
Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
G S LF G+V+MY KCG + EA + D M RD+VSWN++V G+AQN + AL+
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227
Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
+ M D T+ S+LPAV+N + ++++ V DM+
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSNTTT----------------ENVMYVK----DMFF 267
Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
K G+ +++VSWN MI Y++ P EA+ ++ +M G EP V+I
Sbjct: 268 KMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314
Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
L AC D L G +H +++ KL ++ + N+LI MY+KC +++A D+F ++ +
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374
Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
+VSW AMI Y +GR +A+ F K++ + PDS V+ + A + ++
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG----- 429
Query: 466 LVIRSCFE---------KNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMID 515
RSCF+ + + ++D+ + G V A R + DM E + W ++
Sbjct: 430 ---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 516 GYGTH 520
H
Sbjct: 487 ACRVH 491
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/629 (41%), Positives = 392/629 (62%), Gaps = 11/629 (1%)
Query: 195 MFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
+F+R ++ D+ SWN+++A A++G + AL + M + + + A +++
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
+ GK H A G+ S + VS+AL+ MY+ CG++E AR VFD + RN+VSW SMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 314 AYVEGGNPEEAMRIFQKML------DQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD 367
Y GN +A+ +F+ +L D + ++ ++ + AC+ + +H +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 368 QLKLGTDVSMTNSLISMYSKCKK--VDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
+ VS+ N+L+ Y+K + V A IF ++ K VS+N+++ YAQ+G NEA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 426 LNYFCKM-RSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
F ++ ++K + ++ T+ +V+ A++ +R K IH VIR E +V V T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
MY KCG V TAR FD M ++V +W MI GYG HG A+ELF M++ +PN IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
F+ ++ACSH+GL EG +F ++K +G+EP ++HYG MVDLLGRAG L +A+D IQ+M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
++P ++ ++L AC+IHKNVEL E + RLFELD GY++LL++IYA A W +
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
+VR IM+ +GL K PG SL+EL EVH F G +HPQ ++IY FL L ++ AGYV
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 725 DTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
+T+S+ HDV++ +E L HSEKLAIAFG++N+ PGST+++ KNLRVC DCHN K IS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+ RE +VRD RFH FK+G CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 227/443 (51%), Gaps = 20/443 (4%)
Query: 80 SLFCKYNSLSDAAR---------VFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRM 129
+LFC + L R +F DK D +++++ A+ +A+ M
Sbjct: 8 ALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM 67
Query: 130 RYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
R + P ++ +K C + +I GK+ H Q V G+ D+F + ++ MY+ CG++
Sbjct: 68 RKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKL 127
Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM------HEEGRRGDFITIV 243
E+A K+FD +P+R++VSW +++ G+ NG A A+ L + ++ D + +V
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--VETARLVFDGMK 301
S++ A + V + + +++H + ++ GFD V+V L+D YAK G V AR +FD +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 302 SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-VTIMEALHACADLGDLERGI 360
++ VS+NS+++ Y + G EA +F++++ V N +T+ L A + G L G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
+H + ++ L DV + S+I MY KC +V+ A F +++ K + SW AMI GY +G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVM 479
+AL F M ++P+ T VSV+ A + + + +W +A+ R E +
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 480 TALIDMYAKCGAVGTARALFDMM 502
++D+ + G + A L M
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRM 450
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 9/289 (3%)
Query: 75 QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS----FLIRMR 130
+ L+ ++ L DA +VF+ IP + + +M++GY + DAVS L+
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173
Query: 131 YDDVAPVV--YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ 188
DD A + ++ C V + IH +I GF + +++ YAK G+
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233
Query: 189 --IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM-HEEGRRGDFITIVSI 245
+ A K+FD++ ++D VS+N+I++ +AQ+G + A ++ R+ + + IT+ ++
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 246 LPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNV 305
L AV++ G+LRIGK +H +R G + V V T+++DMY KCGRVETAR FD MK++NV
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
SW +MIA Y G+ +A+ +F M+D GV P +T + L AC+ G
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 13/232 (5%)
Query: 91 AARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGD 150
A ++F+ I DK Y++++ YA+ ++A R+ + V V +N L V
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV--VTFNAITLSTVLLA 296
Query: 151 V---GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSW 207
V G +R GK IH Q+I G D+ T +++MY KCG++E A K FDRM +++ SW
Sbjct: 297 VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW 356
Query: 208 NTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG----SLRIGKAVHG 263
++AG+ +G A AL+L M + G R ++IT VS+L A ++ G R A+ G
Sbjct: 357 TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 264 YAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAA 314
R G + + +VD+ + G ++ A + MK + + + W+S++AA
Sbjct: 417 ---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 43 SALLLEVCTS--LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
S +LL V S L+ + I +I+ GL D + T ++ ++CK + A + F+ + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG--- 157
K + M+ GY A+ M V P + +L C G G
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 158 -KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER-DLVSWNTIVAGFA 215
+ G+ G L +V++ + G +++AY + RM + D + W++++A
Sbjct: 411 FNAMKGRF---GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467
Query: 216 QNGFAELALDLVTRMHE 232
+ ELA V R+ E
Sbjct: 468 IHKNVELAEISVARLFE 484
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/753 (34%), Positives = 424/753 (56%), Gaps = 8/753 (1%)
Query: 64 IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAV 123
IK G D T LV + K ++ D +VF+ + ++ + T++ GYA+ + D+ +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 124 SFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
+ +RM+ + P + + L V + G RG ++H ++ NG + ++N+Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 184 AKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIV 243
KCG + +A +FD+ + +V+WN++++G+A NG AL + M R +
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS- 302
S++ AN+ LR + +H ++ GF N+ TAL+ Y+KC + A +F +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
NVVSW +MI+ +++ EEA+ +F +M +GV P T L A + E V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----V 415
Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
H + + ++ +L+ Y K KV+ AA +FS + K +V+W+AM+ GYAQ G
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTA 481
A+ F ++ IKP+ FT S++ A + + K H I+S + ++ V +A
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 482 LIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPN 541
L+ MYAK G + +A +F E+ + +WN MI GY HG A+++F +M + K +
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 542 DITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFI 601
+TF+ +AC+H+GLVEEG YF + +D I P +H MVDL RAG+L +A I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 602 QKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWD 661
+ MP G T++ +L AC++HK ELG AA ++ + P++ +VLL+N+YA + W
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 662 KLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAG 721
+ AKVR +M ++ ++K PG S +E+KN+ +SF +G HP +IY LE L +K G
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Query: 722 YVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATK 780
Y PDT+ + D++D +E +L+ HSE+LAIAFGL+ + GS + I KNLRVCGDCH K
Sbjct: 776 YEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIK 835
Query: 781 YISLVTGREIIVRDMHRFHCF-KNGVCSCGDYW 812
I+ + REI+VRD +RFH F +GVCSCGD+W
Sbjct: 836 LIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 255/496 (51%), Gaps = 24/496 (4%)
Query: 58 RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA 117
++ +++K+GL L++L+ K ++ A +F+ K +++M+ GYA
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 118 SLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
+A+ MR + V ++ ++K+C ++ E+R +++H ++ GF D T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 178 GVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRR 236
++ Y+KC + +A ++F + ++VSW +++GF QN E A+DL + M +G R
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 237 GDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLV 296
+ T IL A+ + VH ++ ++ V TAL+D Y K G+VE A V
Sbjct: 395 PNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 297 FDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL-GD 355
F G+ +++V+W++M+A Y + G E A+++F ++ G++P T L+ CA
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 356 LERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILG 415
+ +G H + +L + + ++++L++MY+K ++ A ++F + + K LVSWN+MI G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC---- 471
YAQ+G+ +AL+ F +M+ + +K D T + V A ++ + +++R C
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 472 -FEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGTHG---LGKAA 526
E N + ++D+Y++ G + A + + +M N T W ++ H LG+ A
Sbjct: 631 TKEHN----SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 527 VELFNKMLEGPTKPND 542
E M KP D
Sbjct: 687 AEKIIAM-----KPED 697
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 197/361 (54%), Gaps = 1/361 (0%)
Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
A+ +FD+ P RD S+ +++ GF+++G + A L +H G D S+L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
+ G+ +H ++ GF V+V T+LVD Y K + R VFD MK RNVV+W ++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
I+ Y +E + +F +M ++G +P + T AL A+ G RG+ VH ++ + L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
+ ++NSLI++Y KC V +A +F K + K++V+WN+MI GYA NG EAL F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
MR ++ + SVI A L +R+ + +H V++ F + + TAL+ Y+KC A
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 492 VGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
+ A LF + +V +W MI G+ + + AV+LF++M +PN+ T+ ++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 551 A 551
A
Sbjct: 406 A 406
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 194/371 (52%), Gaps = 10/371 (2%)
Query: 37 RIYRHPSALLLEVCTSLKELRRILPL---IIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
R+ A ++++C +LKELR L ++K G +T L+ + K ++ DA R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 94 VFEPIPDKLDALYHT-MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVG 152
+F+ I + + T M+ G+ + ++AV M+ V P + Y+ +L +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 153 EIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVA 212
E+H Q++ + T +++ Y K G++EEA K+F + ++D+V+W+ ++A
Sbjct: 412 P----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 213 GFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV-GSLRIGKAVHGYAMRAGFD 271
G+AQ G E A+ + + + G + + T SIL A S+ GK HG+A+++ D
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527
Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
S + VS+AL+ MYAK G +E+A VF + +++VSWNSMI+ Y + G +A+ +F++M
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 332 LDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK 390
+ V+ VT + AC G +E G + ++ K+ + ++ +YS+ +
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 391 VDRAADIFSKL 401
+++A + +
Sbjct: 648 LEKAMKVIENM 658
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 5/272 (1%)
Query: 288 GRVETARL-----VFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
G V ++RL +FD R+ S+ S++ + G +EA R+F + G+E
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
L A L D G +H + DVS+ SL+ Y K +F +++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
+ +V+W +I GYA+N +E L F +M+++ +P+SFT + + LAE V
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
+H +V+++ +K + V +LI++Y KCG V AR LFD + V TWN MI GY +GL
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSH 554
A+ +F M + ++ +F I C++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 394 AADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAE 453
A ++F K G+ S+ +++ G++++GR EA F + ++ D SV+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 454 LSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
L + + +H I+ F +V V T+L+D Y K R +FD M ER+V TW +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
I GY + + + LF +M T+PN TF A+ + G+ G+ T + K+ G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 224
Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
++ + ++++L + G + +A K ++ +T
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 262
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/728 (37%), Positives = 409/728 (56%), Gaps = 72/728 (9%)
Query: 155 RRGKEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAG 213
+ G +H + + + L F+ V++ Y+K G ++ + FD++P+RD VSW T++ G
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 214 FAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSI 273
+ G A+ ++ M +EG T+ ++L +VA + GK VH + ++ G
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 274 VNVSTALVDMYAKCGRVETARLVFD-------------------------------GMKS 302
V+VS +L++MYAKCG A+ VFD M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKML-DQGVEPTNVTIMEALHACADLGDLERGIF 361
R++V+WNSMI+ + + G A+ IF KML D + P T+ L ACA+L L G
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 362 VHKLLDQLKLGTDVS--MTNSLISMYSKCKKVD--------------------------- 392
+H + + G D+S + N+LISMYS+C V+
Sbjct: 301 IHSHI--VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 393 ------RAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
+A +IF L+ + +V+W AMI+GY Q+G EA+N F M +P+S+T+ +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ER 505
++ + L+ + + K IH ++S +V V ALI MYAK G + +A FD++ ER
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 506 HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYF 565
+W MI HG + A+ELF ML +P+ IT++ SAC+H+GLV +G YF
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 566 TSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKN 625
+K I P + HY MVDL GRAG L EA +FI+KMPIEP + +G++L AC++HKN
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 626 VELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
++LG+ AA RL L+P+ G + LAN+Y+A W++ AK+R M+ ++K G S +E
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 686 LKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSH 744
+K++VH F HP+ IY ++ + DEIK GYVPDT S+ HD+E+ V+E +L H
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718
Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
SEKLAIAFGL+++ +T+ I KNLRVC DCH A K+IS + GREIIVRD RFH FK+G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778
Query: 805 VCSCGDYW 812
CSC DYW
Sbjct: 779 FCSCRDYW 786
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 168/668 (25%), Positives = 279/668 (41%), Gaps = 159/668 (23%)
Query: 46 LLEVCTSLKE-----------LRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARV 94
LLE+CT+L + + + +IKSGL L++++ K A ++
Sbjct: 12 LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKL 71
Query: 95 FEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--------------------- 133
F+ +P + ++T+L Y+K +D F ++ D
Sbjct: 72 FDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 134 ----------VAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMY 183
+ P + T +L + GK++H ++ G ++ ++NMY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 184 AKC-------------------------------GQIEEAYKMFDRMPERDLVSWNTIVA 212
AKC GQ++ A F++M ERD+V+WN++++
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 213 GFAQNGFAELALDLVTRMHEEGRRG-DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
GF Q G+ ALD+ ++M + D T+ S+L A AN+ L IGK +H + + GFD
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 272 SIVNVSTALVDMYAKCGRVETARL---------------------------------VFD 298
V AL+ MY++CG VETAR +F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
+K R+VV+W +MI Y + G+ EA+ +F+ M+ G P + T+ L + L L
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 431
Query: 359 GIFVHKLLDQLKLGT--DVSMTNSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILG 415
G +H +K G VS++N+LI+MY+K + A+ F ++ + VSW +MI+
Sbjct: 432 GKQIHG--SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489
Query: 416 YAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKN 475
AQ+G EAL F M + ++PD T V V A HA
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT-----------HA---------- 528
Query: 476 VFVMTALIDMYAKCGAVGTARALFDMMNERH-----VTTWNVMIDGYGTHGLGKAAVELF 530
G V R FDMM + ++ + M+D +G GL + A E
Sbjct: 529 --------------GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 531 NKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLG 589
KM P +P+ +T+ +SAC ++ G + ++ +EP Y A+ +L
Sbjct: 575 EKM---PIEPDVVTWGSLLSACRVHKNIDLGK---VAAERLLLLEPENSGAYSALANLYS 628
Query: 590 RAGRLNEA 597
G+ EA
Sbjct: 629 ACGKWEEA 636
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 122/303 (40%), Gaps = 55/303 (18%)
Query: 64 IKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDAL-YHTMLKGYAKFASLDDA 122
+KSG L++++ K +++ A+R F+ I + D + + +M+ A+ ++A
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI-VNGFSLDLFAMTGVVN 181
+ M + + P Y + C G + +G++ + V+ L +V+
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 182 MYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
++ + G ++EA + ++MP E D+V+W ++++ R+H+ G
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA--------------CRVHKNIDLGKVA 605
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
+L N G+ +AL ++Y+ CG+ E A + M
Sbjct: 606 AERLLLLEPENSGAY----------------------SALANLYSACGKWEEAAKIRKSM 643
Query: 301 KSRNV-----VSWNSM-----IAAYVEGGNPEE------AMRIFQKMLDQGVEPTNVTIM 344
K V SW + + +G +PE+ +I+ ++ G P +++
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
Query: 345 EAL 347
L
Sbjct: 704 HDL 706
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/741 (34%), Positives = 407/741 (54%), Gaps = 6/741 (0%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDD--VA 135
++S K +S A +F+ +PD+ + ++ YA+ + D+A +M
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG--VVNMYAKCGQIEEAY 193
P +T LL C D ++H + GF + F ++ Y + +++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 194 KMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVG 253
+F+ +PE+D V++NT++ G+ ++G ++ L +M + G + T +L AV +
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
+G+ +H ++ GF +V ++D Y+K RV R++FD M + VS+N +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
+Y + E ++ F++M G + N L A+L L+ G +H +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
+ + NSL+ MY+KC+ + A IF L +T VSW A+I GY Q G L F KMR
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
N++ D T +V+ A A + + K +HA +IRS +NVF + L+DMYAKCG++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
A +F+ M +R+ +WN +I + +G G+AA+ F KM+E +P+ ++ L ++ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
H G VE+G YF ++ YGI P HY M+DLLGR GR EA + +MP EP ++
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 614 GAMLGACKIHKNVELGEKAANRLFELDP-DEGGYHVLLANIYAAASMWDKLAKVRTIMEK 672
++L AC+IHKN L E+AA +LF ++ + +V ++NIYAAA W+K+ V+ M +
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 673 KGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHD 731
+G++K P S VE+ +++H F S HP I + L EI+ GY PDT+S + D
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744
Query: 732 VEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREII 791
V++ ++ L HSE+LA+AF L+++ G I + KNLR C DCH A K IS + REI
Sbjct: 745 VDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804
Query: 792 VRDMHRFHCFKNGVCSCGDYW 812
VRD RFH F GVCSCGDYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 237/524 (45%), Gaps = 43/524 (8%)
Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
+ + ++I GF D +V + GQ+ A K++D MP ++ VS NT+++G +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 218 GFAELALDLVTRMHEE------------GRRGDF---------------------ITIVS 244
G A DL M + R F +T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDS--IVNVSTALVDMYAKCGRVETARLVFDGMKS 302
+LP + VH +A++ GFD+ + VS L+ Y + R++ A ++F+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
++ V++N++I Y + G E++ +F KM G +P++ T L A L D G +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
H L D S+ N ++ YSK +V +F ++ VS+N +I Y+Q +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
+L++F +M+ +F +++ A LS ++ + +H + + + + V +L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
+DMYAKC A +F + +R +W +I GY GL A ++LF KM + +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 543 ITFLCAISACSH--SGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
TF + A + S L+ + +H F + + +E V G +VD+ + G + +A
Sbjct: 453 STFATVLKASASFASLLLGKQLHAF--IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQV 509
Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFE--LDPD 642
++MP ++ + A++ A + + E A ++ E L PD
Sbjct: 510 FEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%), Gaps = 8/221 (3%)
Query: 44 ALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPD 100
A +L+ S L +++ II+SG + + LV ++ K S+ DA +VFE +PD
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 101 KLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKE- 159
+ ++ ++ +A + A+ +M + P + +L C G + +G E
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVAG---FA 215
+ G + ++++ + G+ EA K+ D MP E D + W++++
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635
Query: 216 QNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
AE A + + M + ++++ +I A +R
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/788 (33%), Positives = 443/788 (56%), Gaps = 14/788 (1%)
Query: 34 IPSRIYRHPSALLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
+P + P+ LL+ C L+++R + L++K G LVS++ K + LS
Sbjct: 178 VPLGLSSFPA--LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 91 AARVFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
A R+F+ +K DA L++++L Y+ + + M AP Y L C
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 150 DVGEIRRGKEIHGQLIVNG-FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
+ GKEIH ++ + S +L+ ++ MY +CG++ +A ++ +M D+V+WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
+++ G+ QN + AL+ + M G + D +++ SI+ A + +L G +H Y ++
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
G+DS + V L+DMY+KC F M ++++SW ++IA Y + EA+ +F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDL--ERGIFVHKLLDQLKLGTDVSMTNSLISMYS 386
+ + + +E + + L A + L + + I H L L D + N L+ +Y
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVIQNELVDVYG 532
Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
KC+ + A +F ++GK +VSW +MI A NG +EA+ F +M + DS ++
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERH 506
++ A A LS + + IH ++R F + A++DMYA CG + +A+A+FD + +
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 507 VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFT 566
+ + MI+ YG HG GKAAVELF+KM P+ I+FL + ACSH+GL++EG +
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712
Query: 567 SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNV 626
++ +Y +EP +HY +VD+LGRA + EA++F++ M EP V+ A+L AC+ H
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772
Query: 627 ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVEL 686
E+GE AA RL EL+P G VL++N++A W+ + KVR M+ G++K PGCS +E+
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Query: 687 KNEVHSFYSGSTKHPQSKRIYTFLETLIDEI-KAAGYVPDTNSI-HDVEDYVQENLLSSH 744
+VH F + HP+SK IY L + ++ + GYV DT + H+V++ + +L H
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGH 892
Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
SE++AIA+GLL + + + I KNLRVC DCH K +S + R+I++RD +RFH F++G
Sbjct: 893 SERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESG 952
Query: 805 VCSCGDYW 812
+CSCGD W
Sbjct: 953 LCSCGDSW 960
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 228/431 (52%), Gaps = 5/431 (1%)
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTG-VVNMYAKCGQIEEAYKMF 196
V + Y+L++CG + +G+++H ++ S +L + G +V MY KCG +++A K+F
Sbjct: 80 VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVF 139
Query: 197 DRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
D MP+R +WNT++ + NG AL L M EG + ++L A A + +R
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAY 315
G +H ++ G+ S + ALV MYAK + AR +FDG + + + V WNS++++Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH-KLLDQLKLGTD 374
G E + +F++M G P + TI+ AL AC + G +H +L ++
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRS 434
+ + N+LI+MY++C K+ +A I ++ +V+WN++I GY QN EAL +F M +
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 435 KNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
K D +M S+I A LS + +HA VI+ ++ N+ V LIDMY+KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 495 ARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS- 553
F M+++ + +W +I GY + A+ELF + + + +++ + A S
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 554 -HSGLVEEGIH 563
S L+ + IH
Sbjct: 500 LKSMLIVKEIH 510
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/682 (36%), Positives = 396/682 (58%), Gaps = 9/682 (1%)
Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
N +L+VC G +G ++H L+ +G L+L +++MY KC + AYK+FD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
PER++VSW+ +++G NG + +L L + M +G + T + L A + +L G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
+HG+ ++ GF+ +V V +LVDMY+KCGR+ A VF + R+++SWN+MIA +V G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 320 NPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGIFVHKLL--DQLKLGTDV 375
+A+ F M + ++ P T+ L AC+ G + G +H L +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
++T SL+ +Y KC + A F +++ KT++SW+++ILGYAQ G EA+ F +++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 436 NIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA 495
N + DSF + S+I A+ +++R K + AL ++ V+ +++DMY KCG V A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 496 RALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHS 555
F M + V +W V+I GYG HGLGK +V +F +ML +P+++ +L +SACSHS
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 556 GLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGA 615
G+++EG F+ L + +GI+P ++HY +VDLLGRAGRL EA I MPI+P + ++
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 616 MLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
+L C++H ++ELG++ L +D +V+++N+Y A W++ R + KGL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 676 QKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA-GYVPD-TNSIHDVE 733
+K G S VE++ EVH F SG HP + I L+ ++ GYV + +HD++
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDID 607
Query: 734 DYVQENLLSSHSEKLAIAFGLLN---SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREI 790
D +E L +HSEKLAI L + G TI + KNLRVC DCH K +S +T
Sbjct: 608 DESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAY 667
Query: 791 IVRDMHRFHCFKNGVCSCGDYW 812
+VRD RFH F++G CSCGDYW
Sbjct: 668 VVRDAVRFHSFEDGCCSCGDYW 689
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 250/471 (53%), Gaps = 9/471 (1%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
++KSG + L+ ++CK A +VF+ +P++ + ++ G+ L +
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
+S M + P + ++ LK CG + + +G +IHG + GF + + +V+M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEG--RRGDFI 240
Y+KCG+I EA K+F R+ +R L+SWN ++AGF G+ ALD M E R D
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGF--DSIVNVSTALVDMYAKCGRVETARLVFD 298
T+ S+L A ++ G + GK +HG+ +R+GF S ++ +LVD+Y KCG + +AR FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
+K + ++SW+S+I Y + G EAM +F+++ + + + + + AD L +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
G + L +L G + S+ NS++ MY KC VD A F+++Q K ++SW +I GY +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVF 477
+G +++ F +M NI+PD ++V+ A + +I+ + + + ++ + + V
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 478 VMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTHG---LGK 524
++D+ + G + A+ L D M + +V W ++ HG LGK
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/819 (33%), Positives = 443/819 (54%), Gaps = 72/819 (8%)
Query: 65 KSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVS 124
K GL LV+++ K+ + + +FE +P + L++ MLK Y + ++A+
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 125 F------------------LIRMRYDD-----------------VAPVVY---------- 139
L R+ DD V+ +++
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292
Query: 140 --NYTYLLKVCGDVGE----------------------IRRGKEIHGQLIVNGFSLDLFA 175
Y+ LLK D+ E + G+++H + G L L
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 176 MTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR 235
++NMY K + A +FD M ERDL+SWN+++AG AQNG A+ L ++ G
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 236 RGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETAR 294
+ D T+ S+L A +++ L + K VH +A++ S VSTAL+D Y++ ++ A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 295 LVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLG 354
++F+ + ++V+WN+M+A Y + + + +++F M QG + T+ C L
Sbjct: 473 ILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
+ +G VH + D+ +++ ++ MY KC + A F + V+W MI
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 415 GYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEK 474
G +NG A + F +MR + PD FT+ ++ A + L+ + + IHA ++
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 475 NVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKML 534
+ FV T+L+DMYAKCG++ A LF + ++T WN M+ G HG GK ++LF +M
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
KP+ +TF+ +SACSHSGLV E + S+ DYGI+P ++HY + D LGRAG +
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 595 NEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIY 654
+A + I+ M +E +++ +L AC++ + E G++ A +L EL+P + +VLL+N+Y
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Query: 655 AAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLI 714
AAAS WD++ RT+M+ ++K PG S +E+KN++H F + Q++ IY ++ +I
Sbjct: 832 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891
Query: 715 DEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCG 773
+IK GYVP+T+ ++ DVE+ +E L HSEKLA+AFGLL++ P + I + KNLRVCG
Sbjct: 892 RDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCG 951
Query: 774 DCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
DCHNA KYI+ V REI++RD +RFH FK+G+CSCGDYW
Sbjct: 952 DCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 264/537 (49%), Gaps = 14/537 (2%)
Query: 11 VFTNSTPTQTLHEHKHTLSQRAY---IPSRIYRHPSALLLEVCT-----SLKELRRILPL 62
+F N ++ LH +++ + + + S + +L + T SL +++ +
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
+K GL L++++CK A VF+ + ++ +++++ G A+ +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE-IRRGKEIHGQLI-VNGFSLDLFAMTGVV 180
V +++ + P Y T +LK + E + K++H I +N S D F T ++
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALI 459
Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
+ Y++ ++EA +F+R DLV+WN ++AG+ Q+ L L MH++G R D
Sbjct: 460 DAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
T+ ++ + ++ GK VH YA+++G+D + VS+ ++DMY KCG + A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
+ V+W +MI+ +E G E A +F +M GV P TI A + L LE+G
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
+H +L D + SL+ MY+KC +D A +F +++ + +WNAM++G AQ+G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVM 479
E L F +M+S IKPD T + V+ A + ++ A K + ++ + +
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 480 TALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
+ L D + G V A L + M+ E + + ++ G + + K+LE
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 166/612 (27%), Positives = 278/612 (45%), Gaps = 71/612 (11%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFA-----SLDDAVSFLIRMRYD 132
L+S++ K SL+ A RVF+ +PD+ ++++L YA+ + ++ A +R D
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
V + +LK+C G + + HG G D F +VN+Y K G+++E
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199
Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
+F+ MP RD+V WN ++ + + GF E A+DL + H G + IT
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----------- 248
Query: 253 GSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMI 312
LR+ A +G DS G+V++ D ++ N +
Sbjct: 249 --LRL------LARISGDDS-------------DAGQVKSFANGNDASSVSEIIFRNKGL 287
Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
+ Y+ G ++ F M++ VE VT + L + L G VH + LKLG
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM--ALKLG 345
Query: 373 TDVSMT--NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFC 430
D+ +T NSLI+MY K +K A +F + + L+SWN++I G AQNG EA+ F
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 431 KMRSKNIKPDSFTMVSVIPALAELSV-IRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
++ +KPD +TM SV+ A + L + +K +H I+ + FV TALID Y++
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 490 GAVGTARALFDMMNERH---VTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
+ A LF ERH + WN M+ GY G ++LF M + + +D T
Sbjct: 466 RCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 547 CAISACSHSGLVEEG--IHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
C + +G +H + ++K Y ++ + ++D+ + G ++ A +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAY-AIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSI 578
Query: 605 PIEPGITVFGAMLGACKIHKNVELGEK-------AANRLFELDPDEGGYHVLLANIYAAA 657
P+ P + M+ C +E GE+ + RL + PDE +A + A+
Sbjct: 579 PV-PDDVAWTTMISGC-----IENGEEERAFHVFSQMRLMGVLPDE----FTIATLAKAS 628
Query: 658 SMWDKLAKVRTI 669
S L + R I
Sbjct: 629 SCLTALEQGRQI 640
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 37/402 (9%)
Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
GK H +++ + + F + +++MY+KCG + A ++FD+MP+RDLVSWN+I+A +AQ
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 217 NGFA-----ELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
+ + A L + ++ +T+ +L + G + ++ HGYA + G D
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
V+ ALV++Y K G+V+ +++F+ M R+VV WN M+ AY+E G EEA+ +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKV 391
G+ P +T+ D D + + G D S + +I
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQ-------VKSFANGNDASSVSEII--------- 281
Query: 392 DRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPAL 451
+ K L Y +G+ + L F M +++ D T + ++
Sbjct: 282 ---------FRNKGLSE-------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 452 AELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
++ + + +H + ++ + + V +LI+MY K G AR +FD M+ER + +WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
+I G +GL AV LF ++L KP+ T + A S
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 52 SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
++ + +++ IKSG + ++ ++ K +S A F+ IP D + TM+
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
G + + A +MR V P + L K + + +G++IH + +
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
D F T +V+MYAKCG I++AY +F R+ ++ +WN ++ G AQ+G + L L +M
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 232 EEGRRGDFITIVSILPAVANVG----SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
G + D +T + +L A ++ G + + +++HG G + + L D +
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRA 768
Query: 288 GRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLD-QGVEPTNVTIME 345
G V+ A + + M S + +++AA G+ E R+ K+L+ + ++ + ++
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 346 ALHACADLGD 355
++A A D
Sbjct: 829 NMYAAASKWD 838
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 355 DLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMIL 414
DL G H + + + + N+LISMYSKC + A +F K+ + LVSWN+++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 415 GYAQNGR-----VNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
YAQ+ + +A F +R + T+ ++ + ++ H +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
+ + FV AL+++Y K G V + LF+ M R V WN+M+ Y G + A++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 530 FNKMLEGPTKPNDITF 545
+ PN+IT
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
L +GK H + + + L+ MY+KCG + AR VFD M R++VSWNS++AA
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 315 YVEGG-----NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
Y + N ++A +F+ + V + +T+ L C G + H ++
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
L D + +L+++Y K KV +F ++ + +V WN M+ Y + G EA++
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 430 CKMRSKNIKPDSFTM 444
S + P+ T+
Sbjct: 235 SAFHSSGLNPNEITL 249
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 460 AKWIHALVIRSCFEKNV--FVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
K HA ++ FE+N F++ LI MY+KCG++ AR +FD M +R + +WN ++ Y
Sbjct: 58 GKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 518 GTHGLG-----KAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV--EEGIHYFTSLKK 570
+ A LF + + + +T + C HSG V E H +
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGA 619
G E V GA+V++ + G++ E ++MP + ++ ML A
Sbjct: 176 LDGDEFVA---GALVNIYLKFGKVKEGKVLFEEMPYRD-VVLWNLMLKA 220
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 428/754 (56%), Gaps = 34/754 (4%)
Query: 76 TKLVSLFCKYNSLSDAARVFEPIPDKLDA-LYHTMLKGYAKFASLDDAVSFLIRMRYDDV 134
T+ + F + DA ++F+ + +K DA L++ M+KG+ +AV F RM + V
Sbjct: 68 TRALRGFADSRLMEDALQLFDEM-NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 135 APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYK 194
+ Y +++K + + GK+IH +I GF D++ ++++Y K G +A K
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 195 MFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
+F+ MPERD+VSWN++++G+ G +L L M + G + D + +S L A ++V S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 255 LRIGKAVHGYAMRAGFDS-IVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
++GK +H +A+R+ ++ V V T+++DMY+K G V A +F+GM RN+V+WN MI
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 314 AYVEGGNPEEAMRIFQKMLDQ-GVEPTNVTIMEALHACADLGD-------LERGIFVHKL 365
Y G +A FQKM +Q G++P +T + L A A L + RG H +
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMV 366
Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
L+ +LI MY +C ++ A IF ++ K ++SWN++I Y QNG+ A
Sbjct: 367 LE-----------TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
L F ++ ++ PDS T+ S++PA AE + + IHA +++S + N ++ +L+ M
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
YA CG + AR F+ + + V +WN +I Y HG G+ +V LF++M+ PN TF
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
++ACS SG+V+EG YF S+K++YGI+P ++HYG M+DL+GR G + A F+++MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
P ++G++L A + HK++ + E AA ++F+++ D G +VLL N+YA A W+ + +
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
++ +ME KG+ +T S VE K + H F +G H + +IY L+ + + +
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVG-----EE 710
Query: 726 TNSIHDVEDYVQENLLSS-------HSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNA 778
+H V E L+ S HS +LA FGL+++ G + +R N R+C CH
Sbjct: 711 DIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEF 770
Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+ S +T REI+V D FH F NG CSCG+YW
Sbjct: 771 LEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 224/402 (55%), Gaps = 6/402 (1%)
Query: 51 TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
+SL+E ++I ++IK G L+SL+ K DA +VFE +P++ +++M+
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
GY ++ M P ++ L C V + GKEIH + +
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 171 L-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
D+ MT +++MY+K G++ A ++F+ M +R++V+WN ++ +A+NG A +
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 230 MHEE-GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
M E+ G + D IT +++LPA A + G+ +HGYAMR GF + + TAL+DMY +CG
Sbjct: 324 MSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 289 RVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALH 348
++++A ++FD M +NV+SWNS+IAAYV+ G A+ +FQ++ D + P + TI L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 349 ACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS 408
A A+ L G +H + + + ++ + NSL+ MY+ C ++ A F+ + K +VS
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 409 WNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPA 450
WN++I+ YA +G ++ F +M + + P+ T S++ A
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 51 TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTML 110
+++ E R I ++ G + +T L+ ++ + L A +F+ + +K +++++
Sbjct: 344 SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 111 KGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFS 170
Y + A+ + + P +L + + G+EIH ++ + +
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 171 LDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
+ + +V+MYA CG +E+A K F+ + +D+VSWN+I+ +A +GF +++ L + M
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCGR 289
+ T S+L A + G + G R G D + ++D+ + G
Sbjct: 524 IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGN 583
Query: 290 VETARLVFDGM 300
A+ + M
Sbjct: 584 FSAAKRFLEEM 594
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/706 (37%), Positives = 406/706 (57%), Gaps = 40/706 (5%)
Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIE---EAYKMFDRMP 200
LL C + +R IH Q+I G +A++ ++ E A +F +
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
E +L+ WNT+ G A + AL L M G + T +L + A + + G+
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFD---------------GMKSR-- 303
+HG+ ++ G D + V T+L+ MY + GR+E A VFD G SR
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 304 --------------NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
+VVSWN+MI+ Y E GN +EA+ +F+ M+ V P T++ + A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
CA G +E G VH +D G+++ + N+LI +YSKC +++ A +F +L K ++SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
N +I GY EAL F +M P+ TM+S++PA A L I +WIH + +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 470 SC--FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAV 527
+ T+LIDMYAKCG + A +F+ + + +++WN MI G+ HG A+
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 528 ELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDL 587
+LF++M + +P+DITF+ +SACSHSG+++ G H F ++ +DY + P ++HYG M+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 588 LGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYH 647
LG +G EA + I M +EP ++ ++L ACK+H NVELGE A L +++P+ G +
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 648 VLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIY 707
VLL+NIYA+A W+++AK R ++ KG++K PGCS +E+ + VH F G HP+++ IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635
Query: 708 TFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIR 766
LE + ++ AG+VPDT+ + ++E+ +E L HSEKLAIAFGL+++ PG+ + I
Sbjct: 636 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695
Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
KNLRVC +CH ATK IS + REII RD RFH F++GVCSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 303/597 (50%), Gaps = 75/597 (12%)
Query: 38 IYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC----KYNSLSDAAR 93
I HPS LL C +L+ LR I +IK GL + + +KL+ FC + L A
Sbjct: 31 IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAIS 89
Query: 94 VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
VF+ I + +++TM +G+A + A+ + M + P Y + ++LK C
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 154 IRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER----------- 202
+ G++IHG ++ G LDL+ T +++MY + G++E+A+K+FD+ P R
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 203 --------------------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
D+VSWN +++G+A+ G + AL+L M + R D T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
V+++ A A GS+ +G+ VH + GF S + + AL+D+Y+KCG +ETA +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
++V+SWN++I Y +EA+ +FQ+ML G P +VT++ L ACA LG ++ G ++
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 363 HKLLDQ-LKLGTDV-SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
H +D+ LK T+ S+ SLI MY+KC ++ A +F+ + K+L SWNAMI G+A +G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
R + + + F +MR I+PD T V ++ A + ++ + I + + + MT
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD------YKMT 503
Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
++ Y MID G GL K A E+ N M +P
Sbjct: 504 PKLEHYG------------------------CMIDLLGHSGLFKEAEEMINMME---MEP 536
Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD-HYGAMVDLLGRAGRLNE 596
+ + + + AC G VE G + +L K IEP Y + ++ AGR NE
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIK---IEPENPGSYVLLSNIYASAGRWNE 590
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/556 (42%), Positives = 344/556 (61%), Gaps = 2/556 (0%)
Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
G+ VH + +++ F + + L++MYAKCG +E AR VF+ M R+ V+W ++I+ Y +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
P +A+ F +ML G P T+ + A A G +H + ++V +
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
++L+ +Y++ +D A +F L+ + VSWNA+I G+A+ +AL F M
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 438 KPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARA 497
+P F+ S+ A + + KW+HA +I+S + F L+DMYAK G++ AR
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 498 LFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
+FD + +R V +WN ++ Y HG GK AV F +M +PN+I+FL ++ACSHSGL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 558 VEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAML 617
++EG HY+ +KKD GI P HY +VDLLGRAG LN A FI++MPIEP ++ A+L
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 618 GACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQK 677
AC++HKN ELG AA +FELDPD+ G HV+L NIYA+ W+ A+VR M++ G++K
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 678 TPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNS-IHDVEDYV 736
P CS VE++N +H F + +HPQ + I E ++ +IK GYVPDT+ I V+
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557
Query: 737 QENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 796
+E L HSEK+A+AF LLN+ PGSTIHI+KN+RVCGDCH A K S V GREIIVRD +
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617
Query: 797 RFHCFKNGVCSCGDYW 812
RFH FK+G CSC DYW
Sbjct: 618 RFHHFKDGNCSCKDYW 633
Score = 222 bits (566), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 213/392 (54%), Gaps = 4/392 (1%)
Query: 141 YTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
Y LLK C + +G+ +H ++ + F D+ ++NMYAKCG +EEA K+F++MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKA 260
+RD V+W T+++G++Q+ AL +M G + T+ S++ A A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 261 VHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGN 320
+HG+ ++ GFDS V+V +AL+D+Y + G ++ A+LVFD ++SRN VSWN++IA +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
E+A+ +FQ ML G P++ + AC+ G LE+G +VH + + N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
L+ MY+K + A IF +L + +VSWN+++ YAQ+G EA+ +F +MR I+P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALF 499
+ +SV+ A + ++ + L+ + + ++D+ + G + A R +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 500 DMMNERHVTTWNVMIDGYGTHG---LGKAAVE 528
+M E W +++ H LG A E
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 199/395 (50%), Gaps = 24/395 (6%)
Query: 32 AYIPS--RIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQT----------KLV 79
+YIP+ R Y LL+ CT K L+I+ + H+ Q+ L+
Sbjct: 54 SYIPADRRFYN----TLLKKCTVFK-------LLIQGRIVHAHILQSIFRHDIVMGNTLL 102
Query: 80 SLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
+++ K SL +A +VFE +P + + T++ GY++ DA+ F +M +P +
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
+ ++K G ++HG + GF ++ + ++++Y + G +++A +FD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
R+ VSWN ++AG A+ E AL+L M +G R + S+ A ++ G L GK
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
VH Y +++G + L+DMYAK G + AR +FD + R+VVSWNS++ AY + G
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
+EA+ F++M G+ P ++ + L AC+ G L+ G ++L+ + + +
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402
Query: 380 SLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMI 413
+++ + + ++RA ++ T W A++
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 76 TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
+ L+ L+ +Y + DA VF+ + + D ++ ++ G+A+ + + A+ M D
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
P ++Y L C G + +GK +H +I +G L FA +++MYAK G I +A K+
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
FDR+ +RD+VSWN+++ +AQ+GF + A+ M G R + I+ +S+L A ++ G L
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAA 314
G + + G +VD+ + G + A + M + W +++ A
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Query: 315 ----------------------------------YVEGGNPEEAMRIFQKMLDQGV--EP 338
Y GG +A R+ +KM + GV EP
Sbjct: 440 CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499
Query: 339 --TNVTIMEALH 348
+ V I A+H
Sbjct: 500 ACSWVEIENAIH 511
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/677 (38%), Positives = 393/677 (58%), Gaps = 12/677 (1%)
Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSLD----LFAMTGVVNMYAKCGQIEEAYKMFDRM 199
LLK +R G+ +H +++ +LD F ++NMY+K E A +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
P R++VSW ++++G AQNG AL M EG + T AVA++ GK
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
+H A++ G V V + DMY K + AR +FD + RN+ +WN+ I+ V G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTN 379
P EA+ F + P ++T L+AC+D L G+ +H L+ + TDVS+ N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 380 SLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKP 439
LI Y KCK++ + IF+++ K VSW +++ Y QN +A + + R ++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 440 DSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF 499
F + SV+ A A ++ + + IHA +++C E+ +FV +AL+DMY KCG + + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 500 DMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE---GPTKPNDITFLCAISACSHSG 556
D M E+++ T N +I GY G A+ LF +M GPT PN +TF+ +SACS +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT-PNYMTFVSLLSACSRAG 427
Query: 557 LVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
VE G+ F S++ YGIEP +HY +VD+LGRAG + A++FI+KMPI+P I+V+GA+
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
AC++H +LG AA LF+LDP + G HVLL+N +AAA W + VR ++ G++
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547
Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTN-SIHDVEDY 735
K G S + +KN+VH+F + H +K I T L L +E++AAGY PD S++D+E+
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEE 607
Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
+ +S HSEKLA+AFGLL+ I I KNLR+CGDCH+ K++S REIIVRD
Sbjct: 608 EKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDN 667
Query: 796 HRFHCFKNGVCSCGDYW 812
+RFH FK+G+CSC DYW
Sbjct: 668 NRFHRFKDGICSCKDYW 684
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 37 RIYRHPSAL----LLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLS 89
RI HP+++ L C+ L ++ L+++SG L+ + K +
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 90 DAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
+ +F + K + +++ Y + + A +R R D V + + +L C
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
+ + G+ IH + +F + +V+MY KCG IE++ + FD MPE++LV+ N+
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 210 IVAGFAQNGFAELALDLVTRMHEE--GRRGDFITIVSILPAVANVGSLRIGKAVHGYAMR 267
++ G+A G ++AL L M G +++T VS+L A + G++ G + +MR
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMR 440
Query: 268 A--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
+ G + + +VDM + G VE A M + +S W ++ A G P+
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/656 (35%), Positives = 382/656 (58%), Gaps = 1/656 (0%)
Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
K+IH LI + D F + ++ Q + +Y +F ++ +N+++ GF N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
LDL + + G T +L A S ++G +H ++ GF+ V
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
T+L+ +Y+ GR+ A +FD + R+VV+W ++ + Y G EA+ +F+KM++ GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
P + I++ L AC +GDL+ G ++ K ++++++ + + +L+++Y+KC K+++A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
F + K +V+W+ MI GYA N E + F +M +N+KPD F++V + + A L +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
+W +L+ R F N+F+ ALIDMYAKCGA+ +F M E+ + N I G
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389
Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV 577
+G K + +F + + P+ TFL + C H+GL+++G+ +F ++ Y ++
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 578 MDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
++HYG MVDL GRAG L++A+ I MP+ P V+GA+L C++ K+ +L E L
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
Query: 638 ELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS 697
L+P G +V L+NIY+ WD+ A+VR +M KKG++K PG S +EL+ +VH F +
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569
Query: 698 TKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN 756
HP S +IY LE L +E++ G+VP T + DVE+ +E +L HSEKLA+A GL++
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629
Query: 757 SSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+ G I + KNLRVCGDCH K IS +T REI+VRD +RFHCF NG CSC DYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 248/494 (50%), Gaps = 37/494 (7%)
Query: 105 LYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQL 164
LY++++ G+ + + + +R + + + +LK C + G ++H +
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 165 IVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELAL 224
+ GF+ D+ AMT ++++Y+ G++ +A+K+FD +P+R +V+W + +G+ +G A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 225 DLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMY 284
DL +M E G + D IV +L A +VG L G+ + Y V T LV++Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
AKCG++E AR VFD M +++V+W++MI Y P+E + +F +ML + ++P +I+
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
L +CA LG L+ G + L+D+ + T++ M N+LI MY+KC + R ++F +++ K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
+V NA I G A+NG V + F + I PD T + ++ +H
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VH 426
Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
A +I+ D A+ AL +R V + M+D +G G+
Sbjct: 427 AGLIQ--------------DGLRFFNAISCVYAL-----KRTVEHYGCMVDLWGRAGMLD 467
Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPV-MDHYGA 583
A L M P +PN I + +S C LV++ T LK+ +EP +Y
Sbjct: 468 DAYRLICDM---PMRPNAIVWGALLSGCR---LVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 584 MVDLLGRAGRLNEA 597
+ ++ GR +EA
Sbjct: 522 LSNIYSVGGRWDEA 535
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 186/376 (49%), Gaps = 5/376 (1%)
Query: 45 LLLEVCTSLKELR---RILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
L+L+ CT + + L++K G T L+S++ L+DA ++F+ IPD+
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR 175
Query: 102 LDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
+ + GY +A+ +M V P Y +L C VG++ G+ I
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAE 221
+ + F T +VN+YAKCG++E+A +FD M E+D+V+W+T++ G+A N F +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 222 LALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALV 281
++L +M +E + D +IV L + A++G+L +G+ R F + + ++ AL+
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 282 DMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV 341
DMYAKCG + VF MK +++V N+ I+ + G+ + + +F + G+ P
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 342 TIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK 400
T + L C G ++ G+ F + + L V ++ ++ + +D A +
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 401 LQGK-TLVSWNAMILG 415
+ + + W A++ G
Sbjct: 476 MPMRPNAIVWGALLSG 491
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 391/675 (57%), Gaps = 7/675 (1%)
Query: 144 LLKVCGDVGEIRRGKEIHGQLIVNGFSL---DLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
LLKVC + +R G+ IH LIV S D + + ++N+Y KC + A K+FD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIG 258
ER++VSW ++ G+ +GF L L M E R +F+ V + + +N G + G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATV-VFKSCSNSGRIEEG 155
Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
K HG ++ G S V LV MY+ C A V D + ++ ++S ++ Y+E
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
G +E + + +K ++ N+T + +L ++L DL + VH + + +V
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
+LI+MY KC KV A +F + + ++ Y Q+ EALN F KM +K +
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
P+ +T ++ ++AELS+++ +H LV++S + +V V AL++MYAK G++ AR
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
F M R + TWN MI G HGLG+ A+E F++M+ PN ITF+ + ACSH G V
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
E+G+HYF L K + ++P + HY +V LL +AG +A DF++ PIE + + +L
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLN 515
Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
AC + +N LG+K A E P++ G +VLL+NI+A + W+ +AKVR++M +G++K
Sbjct: 516 ACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDT-NSIHDVEDYVQ 737
PG S + ++N+ H F + +HP+ IY ++ ++ +IK GY PD + HDV++ +
Sbjct: 576 PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQR 635
Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
E+ LS HSEKLA+A+GL+ + S +++ KN+R+C DCH+A K IS ++ R I++RD +R
Sbjct: 636 EDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695
Query: 798 FHCFKNGVCSCGDYW 812
FH F +G CSC DYW
Sbjct: 696 FHHFLDGQCSCCDYW 710
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 240/508 (47%), Gaps = 19/508 (3%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY--DDVA 135
L++L+ K A ++F+ +P++ + M+KGY + D V L + + +
Sbjct: 75 LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQN-SGFDFEVLKLFKSMFFSGESR 133
Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
P + T + K C + G I GK+ HG + G F +V MY+ C EA ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
D +P DL +++ ++G+ + G + LD++ + E + +T +S L +N+ L
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL 253
Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
+ VH +R GF++ V AL++MY KCG+V A+ VFD ++N+ +++ AY
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313
Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDV 375
+ + EEA+ +F KM + V P T L++ A+L L++G +H L+ + V
Sbjct: 314 FQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV 373
Query: 376 SMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSK 435
+ N+L++MY+K ++ A FS + + +V+WN MI G + +G EAL F +M
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 436 NIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGT 494
P+ T + V+ A + + + + + L+ + + ++ T ++ + +K G
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 495 ARALFDMMN----ERHVTTWNVMIDG---YGTHGLGKAAVELFNKMLEGPTKPNDITFLC 547
A D M E V W +++ + LGK E +E PND
Sbjct: 494 AE---DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEY---AIE--KYPNDSGVYV 545
Query: 548 AISACSHSGLVEEGIHYFTSLKKDYGIE 575
+S EG+ SL + G++
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVK 573
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/615 (39%), Positives = 376/615 (61%), Gaps = 11/615 (1%)
Query: 205 VSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY 264
+S N ++ + G + A+ ++++ ++ T ++ + SL VH +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQ----TYELLILCCGHRSSLSDALRVHRH 102
Query: 265 AMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEA 324
+ G D ++T L+ MY+ G V+ AR VFD + R + WN++ A G+ EE
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACA----DLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
+ ++ KM GVE T L AC + L +G +H L + + V + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM--RSKNIK 438
L+ MY++ VD A+ +F + + +VSW+AMI YA+NG+ EAL F +M +K+
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
P+S TMVSV+ A A L+ + K IH ++R + + V++AL+ MY +CG + + +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
FD M++R V +WN +I YG HG GK A+++F +ML P +TF+ + ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
EEG F ++ +D+GI+P ++HY MVDLLGRA RL+EA +Q M EPG V+G++LG
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Query: 619 ACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKT 678
+C+IH NVEL E+A+ RLF L+P G +VLLA+IYA A MWD++ +V+ ++E +GLQK
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522
Query: 679 PGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQ 737
PG +E++ +++SF S +P ++I+ FL L +++K GY+P T + +++E +
Sbjct: 523 PGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582
Query: 738 ENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHR 797
E ++ HSEKLA+AFGL+N+S G I I KNLR+C DCH TK+IS +EI+VRD++R
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNR 642
Query: 798 FHCFKNGVCSCGDYW 812
FH FKNGVCSCGDYW
Sbjct: 643 FHRFKNGVCSCGDYW 657
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 199/403 (49%), Gaps = 8/403 (1%)
Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
IR+ + +P Y L+ CG + +H ++ NG D F T ++ MY+
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
G ++ A K+FD+ +R + WN + G E L L +M+ G D T +L
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 247 PAVA----NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS 302
A V L GK +H + R G+ S V + T LVDMYA+ G V+ A VF GM
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 303 RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE--PTNVTIMEALHACADLGDLERGI 360
RNVVSW++MIA Y + G EA+R F++M+ + + P +VT++ L ACA L LE+G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
+H + + L + + + ++L++MY +C K++ +F ++ + +VSWN++I Y +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRS-CFEKNVFVM 479
+A+ F +M + P T VSV+ A + ++ K + + R + +
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 480 TALIDMYAKCGAVG-TARALFDMMNERHVTTWNVMIDGYGTHG 521
++D+ + + A+ + DM E W ++ HG
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 206/386 (53%), Gaps = 16/386 (4%)
Query: 28 LSQRAYIPSRIYRHPSALLLEVC---TSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCK 84
LSQ + + Y LL+ C +SL + R+ I+ +G TKL+ ++
Sbjct: 69 LSQESSPSQQTYE----LLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD 124
Query: 85 YNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYL 144
S+ A +VF+ + +++ + + ++ + +M V + YTY+
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 145 LKVC----GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP 200
LK C V + +GKEIH L G+S ++ MT +V+MYA+ G ++ A +F MP
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 201 ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG--DFITIVSILPAVANVGSLRIG 258
R++VSW+ ++A +A+NG A AL M E + + +T+VS+L A A++ +L G
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
K +HGY +R G DSI+ V +ALV MY +CG++E + VFD M R+VVSWNS+I++Y
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG--IFVHKLLDQLKLGTDVS 376
G ++A++IF++ML G PT VT + L AC+ G +E G +F D + +
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH-GIKPQIE 423
Query: 377 MTNSLISMYSKCKKVDRAADIFSKLQ 402
++ + + ++D AA + ++
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMR 449
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 9/300 (3%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
+ + G T LV ++ ++ + A+ VF +P + + M+ YAK +A
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267
Query: 123 V-SFLIRMR-YDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
+ +F MR D +P +L+ C + + +GK IHG ++ G L ++ +V
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALV 327
Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
MY +CG++E ++FDRM +RD+VSWN++++ + +G+ + A+ + M G +
Sbjct: 328 TMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMR-AGFDSIVNVSTALVDMYAKCGRV-ETARLVFD 298
T VS+L A ++ G + GK + R G + +VD+ + R+ E A++V D
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNV---TIMEALHACADLGD 355
W S++ + GN E A R +++ +EP N ++ ++A A + D
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLADIYAEAQMWD 505
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/740 (34%), Positives = 414/740 (55%), Gaps = 35/740 (4%)
Query: 79 VSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVV 138
+S + + ++A RVF+ +P Y+ M+ GY + + A M D+ V
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL--VS 128
Query: 139 YNYTYLLKVCG-DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
+N V ++G+ R EI + D+ + +++ YA+ G +++A +FD
Sbjct: 129 WNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
RMPE++ VSWN +++ + QN E A L ++ +L G ++
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA----LVSWNCLLG-----GFVKK 232
Query: 258 GKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIA 313
K V R FDS+ V ++ YA+ G+++ AR +FD ++V +W +M++
Sbjct: 233 KKIVEA---RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT 373
Y++ EEA +F KM ++ N + + ER +L D +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG-------ERMEMAKELFDVMPC-R 341
Query: 374 DVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR 433
+VS N++I+ Y++C K+ A ++F K+ + VSW AMI GY+Q+G EAL F +M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 434 SKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG 493
+ + + + S + A++ + K +H +++ +E FV AL+ MY KCG++
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 494 TARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
A LF M + + +WN MI GY HG G+ A+ F M KP+D T + +SACS
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 554 HSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVF 613
H+GLV++G YF ++ +DYG+ P HY MVDLLGRAG L +A + ++ MP EP ++
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 614 GAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKK 673
G +LGA ++H N EL E AA+++F ++P+ G +VLL+N+YA++ W + K+R M K
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 674 GLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDV 732
G++K PG S +E++N+ H+F G HP+ I+ FLE L +K AGYV T+ + HDV
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701
Query: 733 EDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIV 792
E+ +E ++ HSE+LA+A+G++ S G I + KNLRVC DCHNA KY++ +TGR II+
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761
Query: 793 RDMHRFHCFKNGVCSCGDYW 812
RD +RFH FK+G CSCGDYW
Sbjct: 762 RDNNRFHHFKDGSCSCGDYW 781
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 241/477 (50%), Gaps = 32/477 (6%)
Query: 52 SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLK 111
+L + R + ++ + +C + ++S + + + DA VF+ +P+K D ++ +L
Sbjct: 141 NLGKARELFEIMPERDVCSWNT----MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 112 GYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSL 171
Y + + +++A L + R ++ A V +N C G +++ K + + + ++
Sbjct: 197 AYVQNSKMEEAC-MLFKSR-ENWALVSWN-------CLLGGFVKKKKIVEARQFFDSMNV 247
Query: 172 -DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRM 230
D+ + ++ YA+ G+I+EA ++FD P +D+ +W +V+G+ QN E A +L +M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV--NVST--ALVDMYAK 286
E ++ ++L + + K + FD + NVST ++ YA+
Sbjct: 308 PERNE----VSWNAMLAGYVQGERMEMAKEL--------FDVMPCRNVSTWNTMITGYAQ 355
Query: 287 CGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEA 346
CG++ A+ +FD M R+ VSW +MIA Y + G+ EA+R+F +M +G + A
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 347 LHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTL 406
L CAD+ LE G +H L + T + N+L+ MY KC ++ A D+F ++ GK +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 407 VSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKWIHA 465
VSWN MI GY+++G AL +F M+ + +KPD TMV+V+ A + ++ + ++ +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALF-DMMNERHVTTWNVMIDGYGTHG 521
+ N ++D+ + G + A L +M E W ++ HG
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 51/368 (13%)
Query: 304 NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH 363
++ WN I++Y+ G EA+R+F++M N I L G+ E
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN----GEFE---LAR 115
Query: 364 KLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVN 423
KL D++ D+ N +I Y + + + +A ++F + + + SWN M+ GYAQNG V+
Sbjct: 116 KLFDEMP-ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALI 483
+A + F +M KN + +++ A + S + A ++ +S + L+
Sbjct: 175 DARSVFDRMPEKN----DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLL 226
Query: 484 DMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDI 543
+ K + AR FD MN R V +WN +I GY G A +LF+ E P + +
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD---ESPVQ-DVF 282
Query: 544 TFLCAISACSHSGLVEEGIHYFTSL------------------------KKDYGIEPVMD 579
T+ +S + +VEE F + K+ + + P +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 580 --HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLF 637
+ M+ + G+++EA + KMP ++ + G + + E A RLF
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE-----ALRLF 397
Query: 638 ELDPDEGG 645
EGG
Sbjct: 398 VQMEREGG 405
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 136/345 (39%), Gaps = 81/345 (23%)
Query: 348 HACADLGDLERGIFVHKLLDQ----LKLG-TDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
H A+ L+R Q LK G +D+ N IS Y + + + A +F ++
Sbjct: 32 HGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP 91
Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
+ VS+N MI GY +NG A F +M P
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEM------P----------------------- 122
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
E+++ +I Y + +G AR LF++M ER V +WN M+ GY +G
Sbjct: 123 ----------ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 523 GKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTS--------------- 567
A +F++M E ND+++ +SA + +EE F S
Sbjct: 173 VDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228
Query: 568 -LKKDYGIEP--------VMD--HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
+KK +E V D + ++ ++G+++EA + P++ T + AM
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT-WTAM 287
Query: 617 LGACKIHKNVELGEKAANRLFELDPD--EGGYHVLLANIYAAASM 659
+ ++ VE A LF+ P+ E ++ +LA M
Sbjct: 288 VSGYIQNRMVE----EARELFDKMPERNEVSWNAMLAGYVQGERM 328
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 37 RIYRHPSALLLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAAR 93
R+ R + L C + L +++ ++K G L+ ++CK S+ +A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 94 VFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGE 153
+F+ + K ++TM+ GY++ + A+ F M+ + + P +L C G
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 154 IRRGKEIHGQLIVN-GFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIV 211
+ +G++ + + G + +V++ + G +E+A+ + MP E D W T++
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 212 AGFAQNG---FAELALDLVTRMHEEGRRGDFITIVSILPAV---ANVGSLRIG------K 259
+G AE A D + M E G ++ + ++ + +VG LR+ K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPEN-SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
Query: 260 AVHGYA 265
V GY+
Sbjct: 645 KVPGYS 650
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/673 (36%), Positives = 373/673 (55%), Gaps = 32/673 (4%)
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLV-TRM 230
+LF+ ++ Y+K G I E F+++P+RD V+WN ++ G++ +G A+ T M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 231 HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRV 290
+ +T++++L ++ G + +GK +HG ++ GF+S + V + L+ MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 291 ETARLVFDGMKSRNVV------------------------------SWNSMIAAYVEGGN 320
A+ VF G+ RN V SW +MI + G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 321 PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS 380
+EA+ F++M QG++ L AC LG + G +H + + + + ++
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 381 LISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPD 440
LI MY KCK + A +F +++ K +VSW AM++GY Q GR EA+ F M+ I PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 441 SFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFD 500
+T+ I A A +S + H I S V V +L+ +Y KCG + + LF+
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 501 MMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEE 560
MN R +W M+ Y G ++LF+KM++ KP+ +T ISACS +GLVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 561 GIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGAC 620
G YF + +YGI P + HY M+DL R+GRL EA FI MP P + +L AC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 621 KIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPG 680
+ N+E+G+ AA L ELDP + LL++IYA+ WD +A++R M +K ++K PG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Query: 681 CSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDYVQEN 739
S ++ K ++HSF + P +IY LE L ++I GY PDT+ + HDVE+ V+
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670
Query: 740 LLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFH 799
+L+ HSE+LAIAFGL+ G I + KNLRVC DCHNATK+IS VTGREI+VRD RFH
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFH 730
Query: 800 CFKNGVCSCGDYW 812
FK+G CSCGD+W
Sbjct: 731 RFKDGTCSCGDFW 743
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 259/559 (46%), Gaps = 72/559 (12%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
L+ + K +S+ FE +PD+ ++ +++GY+ + AV M D A +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 138 V-YNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAK----------- 185
+LK+ G + GK+IHGQ+I GF L + ++ MYA
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 186 --------------------CGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALD 225
CG IE+A ++F M E+D VSW ++ G AQNG A+ A++
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 226 LVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYA 285
M +G + D S+LPA +G++ GK +H +R F + V +AL+DMY
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 286 KCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIME 345
KC + A+ VFD MK +NVVSW +M+ Y + G EEA++IF M G++P + T+ +
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 346 ALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKT 405
A+ ACA++ LE G H L V+++NSL+++Y KC +D + +F+++ +
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 406 LVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHA 465
VSW AM+ YAQ GR E + F KM +KPD T+ VI A + ++
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV-------- 488
Query: 466 LVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
EK + Y ++G ++ MID + G +
Sbjct: 489 -------EKGQRYFKLMTSEYGIVPSIG---------------HYSCMIDLFSRSGRLEE 526
Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
A+ N M P P+ I + +SAC + G +E G SL + ++P H+ A
Sbjct: 527 AMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE---LDP---HHPAGY 577
Query: 586 DLLGRAGRLNEAWDFIQKM 604
LL WD + ++
Sbjct: 578 TLLSSIYASKGKWDSVAQL 596
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 31/369 (8%)
Query: 57 RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKF 116
++I +IK G L + L+ ++ +SDA +VF + D+ +Y++++ G
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 117 ASLDDAVSFLIRMRYDDVAPVV------------------------------YNYTYLLK 146
++DA+ M D V+ Y + +L
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 147 VCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS 206
CG +G I GK+IH +I F ++ + +++MY KC + A +FDRM ++++VS
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
W +V G+ Q G AE A+ + M G D T+ + A ANV SL G HG A+
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMR 326
+G V VS +LV +Y KCG ++ + +F+ M R+ VSW +M++AY + G E ++
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 327 IFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL-DQLKLGTDVSMTNSLISMY 385
+F KM+ G++P VT+ + AC+ G +E+G KL+ + + + + +I ++
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 386 SKCKKVDRA 394
S+ +++ A
Sbjct: 519 SRSGRLEEA 527
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)
Query: 40 RHPSALLLEVCTSL---KELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
++P +L C L E ++I II++ D + L+ ++CK L A VF+
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD 329
Query: 97 PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
+ K + M+ GY + ++AV + M+ + P Y + C +V +
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
G + HG+ I +G + +V +Y KCG I+++ ++F+ M RD VSW +V+ +AQ
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
G A + L +M + G + D +T+ ++ A + G + G+ + M + + + ++
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR-YFKLMTSEYGIVPSI 508
Query: 277 S--TALVDMYAKCGRVETARLVFDGMK-SRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLD 333
+ ++D++++ GR+E A +GM + + W ++++A GN E + +++
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 334 -QGVEPTNVTIMEALHACA----DLGDLERGI 360
P T++ +++A + L RG+
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
RY K IH +IR+ F+ ++ YA + AR +FD + + ++ +WN ++ Y
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDY 572
GL F K+ P + + +T+ I S SGLV + + ++ +D+
Sbjct: 83 SKAGLISEMESTFEKL---PDR-DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/683 (36%), Positives = 399/683 (58%), Gaps = 7/683 (1%)
Query: 133 DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEA 192
D +N++ LL+ C D I K I ++ +GF ++ + + +V+ KCG I+ A
Sbjct: 60 DTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYA 118
Query: 193 YKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANV 252
++FD M ER +V+WN+++A ++ ++ A+++ M D T+ S+ A +++
Sbjct: 119 RQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDL 178
Query: 253 GSLRIGKAVHGYAMRAGFD-SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
+ + HG A+ G + S V V +ALVDMY K G+ A+LV D ++ ++VV ++
Sbjct: 179 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 238
Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
I Y + G EA++ FQ ML + V+P T L +C +L D+ G +H L+ +
Sbjct: 239 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 298
Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
+ ++ SL++MY +C VD + +F ++ VSW ++I G QNGR AL F K
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
M +IKP+SFT+ S + + L++ + IH +V + F+++ + + LID+Y KCG
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 492 VGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISA 551
AR +FD ++E V + N MI Y +G G+ A++LF +M+ +PND+T L + A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 552 CSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGIT 611
C++S LVEEG F S +KD I DHY MVDLLGRAGRL EA + + I P +
Sbjct: 479 CNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLV 536
Query: 612 VFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIME 671
++ +L ACK+H+ VE+ E+ ++ E++P + G +L++N+YA+ W+++ ++++ M+
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMK 596
Query: 672 KKGLQKTPGCSLVELKNEVHSFYSGST-KHPQSKRIYTFLETLIDEIKAAGYVPDTNSI- 729
L+K P S VE+ E H+F +G HP S++I LE LI + K GYV D + +
Sbjct: 597 DMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656
Query: 730 HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
D+E+ +E L HSEKLAIAF + + GS I I KNLRVC DCH+ K +S V RE
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
II RD RFH F++G CSCGDYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 245/511 (47%), Gaps = 17/511 (3%)
Query: 41 HPSALLLEVCT---SLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
H + LL C S+ ++ I ++KSG + +KLV K + A +VF+
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDG 124
Query: 98 IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
+ ++ +++++ K +AV M ++V P Y + + K D+ +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 158 KEIHGQLIVNGFSL-DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
+ HG ++ G + ++F + +V+MY K G+ EA + DR+ E+D+V ++ G++Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
G A+ M E + + T S+L + N+ + GK +HG +++GF+S +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
T+L+ MY +C V+ + VF ++ N VSW S+I+ V+ G E A+ F+KM+ +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD 396
+P + T+ AL C++L E G +H ++ + D + LI +Y KC D A
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 397 IFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
+F L ++S N MI YAQNG EAL+ F +M + ++P+ T++SV+ A +
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 457 IRYAKWIHALVIRSCFEKNVFVMT-----ALIDMYAKCGAVGTARALFDMMNERHVTTWN 511
+ + F K+ ++T ++D+ + G + A L + + W
Sbjct: 485 VE-----EGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
++ H + A + K+LE +P D
Sbjct: 540 TLLSACKVHRKVEMAERITRKILE--IEPGD 568
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 14/386 (3%)
Query: 33 YIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDA 91
Y S +++ S L LE KE +R L + GL ++F + LV ++ K+ +A
Sbjct: 166 YTLSSVFKAFSDLSLE-----KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA 220
Query: 92 ARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDV 151
V + + +K L ++ GY++ +AV M + V P Y Y +L CG++
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNL 280
Query: 152 GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIV 211
+I GK IHG ++ +GF L + T ++ MY +C ++++ ++F + + VSW +++
Sbjct: 281 KDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLI 340
Query: 212 AGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFD 271
+G QNG E+AL +M + + + T+ S L +N+ G+ +HG + GFD
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400
Query: 272 SIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKM 331
+ L+D+Y KCG + ARLVFD + +V+S N+MI +Y + G EA+ +F++M
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Query: 332 LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNS----LISMYSK 387
++ G++P +VT++ L AC + +E G +L D + + +TN ++ + +
Sbjct: 461 INLGLQPNDVTVLSVLLACNNSRLVEEGC---ELFDSFR-KDKIMLTNDHYACMVDLLGR 516
Query: 388 CKKVDRAADIFSKLQGKTLVSWNAMI 413
+++ A + +++ LV W ++
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLL 542
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/754 (34%), Positives = 423/754 (56%), Gaps = 10/754 (1%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
I+K G C L++ + K DA +F+ +P++ + + T+ +GYA D
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDP 130
Query: 123 VSFLIRMRYD--DVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
+ R+ + ++ P V+ L V D EI +H ++ G+ + F ++
Sbjct: 131 IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNAFVGAALI 188
Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
N Y+ CG ++ A +F+ + +D+V W IV+ + +NG+ E +L L++ M G +
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
T + L A +G+ K VHG ++ + V L+ +Y + G + A VF+ M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
+VV W+ MIA + + G EA+ +F +M + V P T+ L+ CA G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
+H L+ ++ D+ ++N+LI +Y+KC+K+D A +F++L K VSWN +I+GY G
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
+A + F + + T S + A A L+ + +H L I++ K V V
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 481 ALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKP 540
+LIDMYAKCG + A+++F+ M V +WN +I GY THGLG+ A+ + + M + KP
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 541 NDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDF 600
N +TFL +S CS++GL+++G F S+ +D+GIEP ++HY MV LLGR+G+L++A
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKL 608
Query: 601 IQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMW 660
I+ +P EP + ++ AML A N E ++A + +++P + +VL++N+YA A W
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQW 668
Query: 661 DKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAA 720
+A +R M++ G++K PG S +E + +VH F G + HP K I LE L + A
Sbjct: 669 ANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRA 728
Query: 721 GYVPDTNSI-HDVEDYVQENLLSSHSEKLAIAFGLLN-SSPGSTIHIRKNLRVCGDCHNA 778
GYVPD N++ D++D ++ L HSE+LA+A+GL+ S + I I KNLR+C DCH+A
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788
Query: 779 TKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
K IS + R++++RDM+RFH F GVCSCGD+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 225/434 (51%), Gaps = 6/434 (1%)
Query: 132 DDVAPVVYNYTY--LLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
D + P + ++ Y +L+ C + K IH ++ G LDLFA ++N Y K G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
++A +FD MPER+ VS+ T+ G+A + + L +R+H EG + S L
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
++ I +H ++ G+DS V AL++ Y+ CG V++AR VF+G+ +++V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 310 SMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQL 369
+++ YVE G E+++++ M G P N T AL A LG + VH + +
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 370 KLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYF 429
D + L+ +Y++ + A +F+++ +V W+ MI + QNG NEA++ F
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 430 CKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKC 489
+MR + P+ FT+ S++ A + +H LV++ F+ +++V ALID+YAKC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 490 GAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAI 549
+ TA LF ++ ++ +WN +I GY G G A +F + L ++TF A+
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 550 SACSHSGLVEEGIH 563
AC+ ++ G+
Sbjct: 457 GACASLASMDLGVQ 470
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 50 CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
C+ L E ++ L++K G L+ ++ K + A ++F + K + ++T+
Sbjct: 363 CSGLGE--QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
+ GY A S + V+ ++ L C + + G ++HG I
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
+ + +++MYAKCG I+ A +F+ M D+ SWN +++G++ +G AL ++
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVDMYAKCG 288
M + + + +T + +L +N G + G+ +R G + + T +V + + G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600
Query: 289 RVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
+++ A + +G+ +V+ W +M++A + N E A R +++L
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 390/644 (60%), Gaps = 19/644 (2%)
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
++ + G+V+ Y K G+I+EA K+FD MPER++VSW +V G+ NG ++A L +M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
E+ + + ++ L RI A Y M D+I T+++ K GRV+
Sbjct: 138 EKNKVSWTVMLIGFLQ------DGRIDDACKLYEMIPDKDNIAR--TSMIHGLCKEGRVD 189
Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
AR +FD M R+V++W +M+ Y + ++A +IF M E T V+ L
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYV 245
Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
G +E +L + + + ++ N++IS + ++ +A +F ++ + SW
Sbjct: 246 QNGRIEDA---EELFEVMPVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
+I + +NG EAL+ F M+ + ++P T++S++ A L+ + + K +HA ++R
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
F+ +V+V + L+ MY KCG + ++ +FD + + WN +I GY +HGLG+ A+++F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 532 KM-LEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGR 590
+M L G TKPN++TF+ +SACS++G+VEEG+ + S++ +G++P+ HY MVD+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 591 AGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLL 650
AGR NEA + I M +EP V+G++LGAC+ H +++ E A +L E++P+ G ++LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 651 ANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGS-TKHPQSKRIYTF 709
+N+YA+ W +A++R +M+ + ++K+PGCS E++N+VH+F G HP+ + I
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 710 LETLIDEIKAAGYVPDTN-SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKN 768
L+ L ++ AGY PD + ++HDV++ + N L HSE+LA+A+ LL S G I + KN
Sbjct: 602 LDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKN 661
Query: 769 LRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
LRVC DCH A K IS V REII+RD +RFH F+NG CSC DYW
Sbjct: 662 LRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 220/464 (47%), Gaps = 25/464 (5%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
LVS + K + +A +VF+ +P++ + ++KGY +D A S +M +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV-- 142
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
++T +L G I +++ ++I + D A T +++ K G+++EA ++FD
Sbjct: 143 --SWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
M ER +++W T+V G+ QN + A + M E+ ++ S+L G RI
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNG--RI 250
Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
A + + I A++ + G + AR VFD MK RN SW ++I +
Sbjct: 251 EDAEELFEVMPVKPVI--ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
G EA+ +F M QGV PT T++ L CA L L G VH L + + DV +
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMR-SKN 436
+ L++MY KC ++ ++ IF + K ++ WN++I GYA +G EAL FC+M S +
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 437 IKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTA----LIDMYAKCGAV 492
KP+ T V+ + A + ++ I+ + S F V +TA ++DM + G
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVF--GVKPITAHYACMVDMLGRAGRF 485
Query: 493 GTARALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLE 535
A + D M E W ++ TH A K++E
Sbjct: 486 NEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 161/301 (53%), Gaps = 13/301 (4%)
Query: 72 HLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRY 131
++ +T ++ CK + +A +F+ + ++ + TM+ GY + +DDA
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF----- 226
Query: 132 DDVAPVVYNYTYLLKVCGDV--GEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQI 189
DV P ++ + G V G I +E+ + V + A +++ + G+I
Sbjct: 227 -DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEI 281
Query: 190 EEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAV 249
+A ++FD M ER+ SW T++ +NGF ALDL M ++G R F T++SIL
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 250 ANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWN 309
A++ SL GK VH +R FD V V++ L+ MY KCG + ++L+FD S++++ WN
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 310 SMIAAYVEGGNPEEAMRIFQKM-LDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQ 368
S+I+ Y G EEA+++F +M L +P VT + L AC+ G +E G+ +++ ++
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 369 L 369
+
Sbjct: 462 V 462
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 30/360 (8%)
Query: 266 MRAGFDSIVNVSTALVDM--YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEE 323
+R + + + TA V + ++ G++ AR +FD S+++ SWNSM+A Y P +
Sbjct: 7 LRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 324 AMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLIS 383
A ++F +M D+ + N + + G+++ K+ D + VS T +L+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKN----GEIDEA---RKVFDLMPERNVVSWT-ALVK 118
Query: 384 MYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFT 443
Y KVD A +F K+ K VSW M++G+ Q+GR+++A CK+ D+
Sbjct: 119 GYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIA 174
Query: 444 MVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN 503
S+I L + + A+ I E++V T ++ Y + V AR +FD+M
Sbjct: 175 RTSMIHGLCKEGRVDEAREI----FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 504 ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIH 563
E+ +W M+ GY +G + A ELF M P KP I IS G + +
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKPV-IACNAMISGLGQKGEIAKARR 286
Query: 564 YFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWD---FIQKMPIEPGITVFGAMLGAC 620
F S+K+ + ++ + R G EA D +QK + P ++L C
Sbjct: 287 VFDSMKERNDAS-----WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
++S + ++ A RVF+ + ++ DA + T++K + + +A+ I M+ V P
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
+L VC + + GK++H QL+ F +D++ + ++ MY KCG++ ++ +FD
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGR-RGDFITIVSILPAVANVGSLR 256
R P +D++ WN+I++G+A +G E AL + M G + + +T V+ L A + G +
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 257 IGKAVHGYAMRA--GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR-NVVSWNSMIA 313
G ++ +M + G I +VDM + GR A + D M + W S++
Sbjct: 451 EGLKIY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 314 AYVEGGNPEEAMRIFQKMLDQGVEPTN 340
A + A +K+++ +EP N
Sbjct: 510 ACRTHSQLDVAEFCAKKLIE--IEPEN 534
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
N I+ S+ K+ A +F K++ SWN+M+ GY N +A F +M +NI
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
+ ++ + I A+ + L+ E+NV TAL+ Y G V A +L
Sbjct: 80 ---ISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
F M E++ +W VM+ G+ G A +L+ + P K N I I G V
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDN-IARTSMIHGLCKEGRV 188
Query: 559 EEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLG 618
+E F + + I + MV G+ R+++A MP + ++ ++G
Sbjct: 189 DEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 619 ACKIHKNVELGEKAANRLFELDP 641
+ + +E E+ LFE+ P
Sbjct: 244 YVQ-NGRIEDAEE----LFEVMP 261
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/651 (39%), Positives = 378/651 (58%), Gaps = 12/651 (1%)
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
++F+ +V YAK +I A ++FD +P+ D VS+NT+++G+A A+ L RM
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
+ G D T+ ++ A + + + K +H +++ GFDS +V+ A V Y+K G +
Sbjct: 133 KLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 292 TARLVFDGMKS-RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHAC 350
A VF GM R+ VSWNSMI AY + +A+ ++++M+ +G + T+ L+A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 351 ADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAAD---IFSKLQGKTLV 407
L L G H L + + + + LI YSKC D D +F ++ LV
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 408 SWNAMILGYAQNGRVNE-ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHAL 466
WN MI GY+ N ++E A+ F +M+ +PD + V V A + LS K IH L
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 467 VIRSCFEKN-VFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKA 525
I+S N + V ALI +Y K G + AR +FD M E + ++N MI GY HG G
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 526 AVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMV 585
A+ L+ +ML+ PN ITF+ +SAC+H G V+EG YF ++K+ + IEP +HY M+
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 586 DLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGG 645
DLLGRAG+L EA FI MP +PG + A+LGAC+ HKN+ L E+AAN L + P
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 646 YHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKR 705
+V+LAN+YA A W+++A VR M K ++K PGCS +E+K + H F + HP +
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 706 IYTFLETLIDEIKAAGYVPDTN----SIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGS 761
+ +LE ++ ++K GYV D + + +E L HSEKLA+AFGL+++ G
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 762 TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+ + KNLR+CGDCHNA K++S V GREIIVRD RFHCFK+G CSCGDYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 217/486 (44%), Gaps = 51/486 (10%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
+V + K + + A ++F+ IP Y+T++ GYA A+ RMR
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
+ + L+ C D + K++H + GF V Y+K G + EA +F
Sbjct: 140 GFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 198 RMPE-RDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLR 256
M E RD VSWN+++ + Q+ AL L M +G + D T+ S+L A+ ++ L
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 257 IGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE---TARLVFDGMKSRNVVSWNSMIA 313
G+ HG ++AGF +V + L+D Y+KCG + + VF + S ++V WN+MI+
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317
Query: 314 AYVEGGN-PEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
Y EEA++ F++M G P + + + AC++L + +H L + +
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 373 TD-VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
++ +S+ N+LIS+Y K + A +F ++ VS+N MI GYAQ+G EAL + +
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437
Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGA 491
M I P+ T V+V+ A A CG
Sbjct: 438 MLDSGIAPNKITFVAVLSACAH-----------------------------------CGK 462
Query: 492 VGTARALFDMMNER-----HVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFL 546
V + F+ M E ++ MID G G + A + M P KP + +
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWA 519
Query: 547 CAISAC 552
+ AC
Sbjct: 520 ALLGAC 525
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 186/379 (49%), Gaps = 8/379 (2%)
Query: 43 SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
S L+ C + ++++ + G V+ + K L +A VF + +
Sbjct: 144 SGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 103 DAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIH 161
D + +++M+ Y + A++ M + ++ +L + + G++ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 162 GQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAY---KMFDRMPERDLVSWNTIVAGFAQN- 217
G+LI GF + +G+++ Y+KCG + Y K+F + DLV WNT+++G++ N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDS-IVNV 276
+E A+ +M G R D + V + A +N+ S K +HG A+++ S ++V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
+ AL+ +Y K G ++ AR VFD M N VS+N MI Y + G+ EA+ ++Q+MLD G+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 337 EPTNVTIMEALHACADLGDLERGI-FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAA 395
P +T + L ACA G ++ G + + + + K+ + + +I + + K++ A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 396 DIFSKLQGKT-LVSWNAMI 413
+ K V+W A++
Sbjct: 504 RFIDAMPYKPGSVAWAALL 522
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 202/485 (41%), Gaps = 75/485 (15%)
Query: 239 FITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR--------- 289
F T +L L GK++H +++ S +S V++Y+KCGR
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 290 ----------------------VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRI 327
+ AR +FD + + VS+N++I+ Y + AM +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 328 FQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSK 387
F++M G E T+ + AC D DL + + H + S+ N+ ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQL--HCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 388 CKKVDRAADIFSKL-QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
+ A +F + + + VSWN+MI+ Y Q+ +AL + +M K K D FT+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVG---TARALFDMMN 503
V+ AL L + + H +I++ F +N V + LID Y+KCG + +F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 504 ERHVTTWNVMIDGYG-THGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
+ WN MI GY L + AV+ F +M +P+D +F+C SACS+ +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 563 HYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP----------------- 605
K + + A++ L ++G L +A +MP
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 606 -----------------IEPGITVFGAMLGACKIHKNVELGEKAANRL---FELDPDEGG 645
I P F A+L AC V+ G++ N + F+++P+
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 646 YHVLL 650
Y ++
Sbjct: 486 YSCMI 490
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 364/660 (55%), Gaps = 39/660 (5%)
Query: 192 AYKMFDRMPER-DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVA 250
A +F +P + + +N + +++ + R+ G R D + + IL AV+
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 251 NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNS 310
V +L G +HG A + V T +DMYA CGR+ AR VFD M R+VV+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 311 MIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLK 370
MI Y G +EA ++F++M D V P + + + AC G++ +++ L +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 371 LGTDVSMTNSLISMY-------------------------------SKCKKVDRAADIFS 399
+ D + +L++MY SKC ++D A IF
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 400 KLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRY 459
+ + K LV W MI Y ++ EAL F +M IKPD +M SVI A A L ++
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 460 AKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGT 519
AKW+H+ + + E + + ALI+MYAKCG + R +F+ M R+V +W+ MI+
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 520 HGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMD 579
HG A+ LF +M + +PN++TF+ + CSHSGLVEEG F S+ +Y I P ++
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 580 HYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFEL 639
HYG MVDL GRA L EA + I+ MP+ + ++G+++ AC+IH +ELG+ AA R+ EL
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 640 DPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK 699
+PD G VL++NIYA W+ + +R +ME+K + K G S ++ + H F G +
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602
Query: 700 HPQSKRIYTFLETLIDEIKAAGYVPDTNSIH-DVEDYVQENLLSSHSEKLAIAFGLLNSS 758
H QS IY L+ ++ ++K AGYVPD S+ DVE+ +++L+ HSEKLA+ FGL+N
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 662
Query: 759 PGS------TIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
I I KNLRVC DCH K +S V REIIVRD RFHC+KNG+CSC DYW
Sbjct: 663 KEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 269/550 (48%), Gaps = 79/550 (14%)
Query: 91 AARVFEPIPDKLDAL-YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCG 149
A VF IP +++ ++ L+ ++ + + F R+R+ +++ +LK
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 150 DVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNT 209
V + G E+HG D F TG ++MYA CG+I A +FD M RD+V+WNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 210 IVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGY----- 264
++ + + G + A L M + D + + +I+ A G++R +A++ +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 265 ------------AMRAGFD------------SIVN--VSTALVDMYAKCGRVETARLVFD 298
M AG S+ N VSTA+V Y+KCGR++ A+++FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 299 GMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLER 358
+ +++V W +MI+AYVE P+EA+R+F++M G++P V++ + ACA+LG L++
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 359 GIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQ 418
+VH + L +++S+ N+LI+MY+KC +D D+F K+ + +VSW++MI +
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFV 478
+G ++AL+ F +M+ +N++P+ T V V+ + ++ K I A
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA------------- 469
Query: 479 MTALIDMYAKCGAVGTARALFDMMNERHVTT----WNVMIDGYGTHGLGKAAVELFNKML 534
M +E ++T + M+D +G L + A+E+ M
Sbjct: 470 ---------------------SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM- 507
Query: 535 EGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRL 594
P N + + +SAC G +E G + K+ +EP DH GA+V L+
Sbjct: 508 --PVASNVVIWGSLMSACRIHGELELGKF---AAKRILELEP--DHDGALV-LMSNIYAR 559
Query: 595 NEAWDFIQKM 604
+ W+ ++ +
Sbjct: 560 EQRWEDVRNI 569
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 180/412 (43%), Gaps = 34/412 (8%)
Query: 244 SILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSR 303
+IL ++ SL K +H + +R + +N + + + + A VF + S
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSP 73
Query: 304 -NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFV 362
+ +N + P + +Q++ G + + L A + + L G+ +
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 363 HKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRV 422
H + ++ D + + MY+ C +++ A ++F ++ + +V+WN MI Y + G V
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 423 NEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTAL 482
+EA F +M+ N+ PD + +++ A +RY + I+ +I + + ++TAL
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 483 IDMYA-------------------------------KCGAVGTARALFDMMNERHVTTWN 511
+ MYA KCG + A+ +FD ++ + W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 512 VMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKD 571
MI Y + A+ +F +M KP+ ++ ISAC++ G++++ + S
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHV 372
Query: 572 YGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
G+E + A++++ + G L+ D +KMP + + +M+ A +H
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/569 (40%), Positives = 352/569 (61%), Gaps = 6/569 (1%)
Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC---GRVETARLVFDGMKSRNV 305
++ SLR + YA+++ + + V+ L++ + + AR +F+ M ++
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 306 VSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKL 365
V +NSM Y NP E +F ++L+ G+ P N T L ACA LE G +H L
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 366 LDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEA 425
+L L +V + +LI+MY++C+ VD A +F ++ +V +NAMI GYA+ R NEA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 426 LNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDM 485
L+ F +M+ K +KP+ T++SV+ + A L + KWIH + F K V V TALIDM
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 486 YAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITF 545
+AKCG++ A ++F+ M + W+ MI Y HG + ++ +F +M +P++ITF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 546 LCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMP 605
L ++ACSH+G VEEG YF+ + +GI P + HYG+MVDLL RAG L +A++FI K+P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 606 IEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAK 665
I P ++ +L AC H N++L EK + R+FELD GG +V+L+N+YA W+ +
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDS 454
Query: 666 VRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPD 725
+R +M+ + K PGCS +E+ N VH F+SG + +++ L+ ++ E+K +GYVPD
Sbjct: 455 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Query: 726 TNSI--HDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
T+ + ++ D +E L HSEKLAI FGLLN+ PG+TI + KNLRVC DCHNA K IS
Sbjct: 515 TSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLIS 574
Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
L+ GR++++RD+ RFH F++G CSCGD+W
Sbjct: 575 LIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 221/408 (54%), Gaps = 9/408 (2%)
Query: 24 HKHTLSQRAYIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFC 83
H T ++ + I + ++P LL+ C SL+EL +I IKS + D F KL++ FC
Sbjct: 14 HAETFTKHSKIDTVNTQNP-ILLISKCNSLRELMQIQAYAIKSHIEDVS-FVAKLIN-FC 70
Query: 84 KYN----SLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVY 139
+ S+S A +FE + + ++++M +GY++F + + S + + D + P Y
Sbjct: 71 TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130
Query: 140 NYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRM 199
+ LLK C + G+++H + G +++ ++NMY +C ++ A +FDR+
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 200 PERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGK 259
E +V +N ++ G+A+ AL L M + + + IT++S+L + A +GSL +GK
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 260 AVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGG 319
+H YA + F V V+TAL+DM+AKCG ++ A +F+ M+ ++ +W++MI AY G
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 320 NPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMT 378
E++M +F++M + V+P +T + L+AC+ G +E G + +++ + + +
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370
Query: 379 NSLISMYSKCKKVDRAADIFSKLQ-GKTLVSWNAMILGYAQNGRVNEA 425
S++ + S+ ++ A + KL T + W ++ + + ++ A
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 180/346 (52%), Gaps = 2/346 (0%)
Query: 192 AYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVAN 251
A +F+ M E D+V +N++ G+++ L + E+G D T S+L A A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 252 VGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
+L G+ +H +M+ G D V V L++MY +C V++AR VFD + VV +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKL 371
I Y P EA+ +F++M + ++P +T++ L +CA LG L+ G ++HK +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 372 GTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCK 431
V + +LI M++KC +D A IF K++ K +W+AMI+ YA +G+ +++ F +
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 432 MRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
MRS+N++PD T + ++ A + + K+ +V + ++ +++D+ ++ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 491 AVGTARALFDMMNERHVTT-WNVMIDGYGTHGLGKAAVELFNKMLE 535
+ A D + W +++ +H A ++ ++ E
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/713 (35%), Positives = 394/713 (55%), Gaps = 73/713 (10%)
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMP--ERDLVSWNTIVAGFAQNGFAELALDLVTR 229
D A T +V+ Y G I A +F++ P RD V +N ++ GF+ N A++L +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 230 MHEEGRRGDFITIVSILPAVANVGS-LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCG 288
M EG + D T S+L +A V + H A+++G I +VS ALV +Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 289 R----VETARLVFDGMKSRNVVSW--------------------------------NSMI 312
+ +AR VFD + ++ SW N+MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 313 AAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLG 372
+ YV G +EA+ + ++M+ G+E T + ACA G L+ G VH + + +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-RED 317
Query: 373 TDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKM 432
NSL+S+Y KC K D A IF K+ K LVSWNA++ GY +G + EA F +M
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 433 RSKNI-------------------------------KPDSFTMVSVIPALAELSVIRYAK 461
+ KNI +P + I + A L +
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 462 WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHG 521
HA +++ F+ ++ ALI MYAKCG V AR +F M +WN +I G HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
G AV+++ +ML+ +P+ IT L ++ACSH+GLV++G YF S++ Y I P DHY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
++DLL R+G+ ++A I+ +P +P ++ A+L C++H N+ELG AA++LF L P
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
+ G ++LL+N++AA W+++A+VR +M +G++K CS +E++ +VH+F T HP
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 702 QSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVE-DYVQENLLSSHSEKLAIAFGLLNSSP 759
+++ +Y +L+ L E++ GYVPDT+ + HDVE D +E++L++HSEK+A+AFGL+ P
Sbjct: 678 EAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPP 737
Query: 760 GSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
G+TI I KNLR CGDCHN +++S V R+II+RD RFH F+NG CSCG++W
Sbjct: 738 GTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/573 (24%), Positives = 258/573 (45%), Gaps = 75/573 (13%)
Query: 75 QTKLVSLFCKYNSLSDAARVFE--PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYD 132
+T +VS +C ++ A VFE P+ + +Y+ M+ G++ A++ +M+++
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 133 DVAPVVYNYTYLLKVCGDVGEI-RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQ--- 188
P + + +L V + ++ + H + +G +V++Y+KC
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 189 -IEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL------------------------- 222
+ A K+FD + E+D SW T++ G+ +NG+ +L
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 223 -------ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVN 275
AL++V RM G D T S++ A A G L++GK VH Y +R D +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321
Query: 276 VSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYV------------------- 316
+LV +Y KCG+ + AR +F+ M ++++VSWN++++ YV
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 317 ------------EGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
E G EE +++F M +G EP + A+ +CA LG G H
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
L ++ + +S N+LI+MY+KC V+ A +F + VSWNA+I Q+G E
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYA-KWIHALVIRSCFEKNVFVMTALI 483
A++ + +M K I+PD T+++V+ A + ++ K+ ++ LI
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 484 DMYAKCGAVGTARALFDMMNERHVT-TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
D+ + G A ++ + + + W ++ G HG + + +K+ G +D
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF-GLIPEHD 620
Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIE 575
T++ + + +G EE + L +D G++
Sbjct: 621 GTYMLLSNMHAATGQWEE-VARVRKLMRDRGVK 652
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 173/394 (43%), Gaps = 78/394 (19%)
Query: 254 SLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKS----------- 302
SL++ +AVHG + GF ++ L+D+Y K + AR +FD +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 303 ----------------------RNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
R+ V +N+MI + + A+ +F KM +G +P N
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 341 VTIMEALHACADLGDLERG-IFVHKLLDQLKLGTDVSMTNSLISMYSKCKK----VDRAA 395
T L A + D E+ + H + G S++N+L+S+YSKC + A
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 396 DIFSKLQGK--------------------------------TLVSWNAMILGYAQNGRVN 423
+F ++ K LV++NAMI GY G
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 424 EALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVM-TAL 482
EAL +M S I+ D FT SVI A A +++ K +HA V+R E F +L
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSL 326
Query: 483 IDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPND 542
+ +Y KCG ARA+F+ M + + +WN ++ GY + G A +F +M E N
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE----KNI 382
Query: 543 ITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEP 576
++++ IS + +G EEG+ F+ +K++ G EP
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEP 415
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 49/290 (16%)
Query: 74 FQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA----------- 122
F LVSL+ K +A +FE +P K ++ +L GY + +A
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 123 -VSFLIR-------------------MRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
+S++I M+ + P Y ++ +K C +G G++ H
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
QL+ GF L A ++ MYAKCG +EEA ++F MP D VSWN ++A Q+G
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV------ 276
A+D+ M ++G R D IT++++L A ++ G + G R FDS+ V
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG--------RKYFDSMETVYRIPPG 553
Query: 277 ---STALVDMYAKCGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPE 322
L+D+ + G+ A V + + + W ++++ GN E
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 56/291 (19%)
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSK--LQGKTLVSWNAMILGYAQ 418
+ +L D++ ++ T +++S Y + A +F K + + V +NAMI G++
Sbjct: 67 YARQLFDEISEPDKIART-TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 419 NGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALA-----ELSVIRYAKWIHALVIRSCFE 473
N A+N FCKM+ + KPD+FT SV+ LA E +++ HA ++S
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAG 181
Query: 474 KNVFVMTALIDMYAKCGA----VGTARALFDMMNERHVTTW------------------- 510
V AL+ +Y+KC + + +AR +FD + E+ +W
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Query: 511 -------------NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGL 557
N MI GY G + A+E+ +M+ + ++ T+ I AC+ +GL
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 558 VEEG--IHYFTSLKKDYGIEPVMDHY-GAMVDLLGRAGRLNEAWDFIQKMP 605
++ G +H + ++D+ H+ ++V L + G+ +EA +KMP
Sbjct: 302 LQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMP 347
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 351/569 (61%), Gaps = 1/569 (0%)
Query: 245 ILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRN 304
IL A G++ KA HG +R + V + L++ Y+KCG VE AR VFDGM R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 305 VVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHK 364
+VSWN+MI Y EA+ IF +M ++G + + TI L AC D +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 365 LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNE 424
L + + ++ + +L+ +Y+KC + A +F +Q K+ V+W++M+ GY QN E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 425 ALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALID 484
AL + + + +++ + FT+ SVI A + L+ + K +HA++ +S F NVFV ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 485 MYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDIT 544
MYAKCG++ + +F + E+++ WN +I G+ H K + LF KM + PN++T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 545 FLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKM 604
F +S C H+GLVEEG +F ++ YG+ P + HY MVD+LGRAG L+EA++ I+ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 605 PIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLA 664
P +P +++G++L +C+++KN+EL E AA +LFEL+P+ G HVLL+NIYAA W+++A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 665 KVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVP 724
K R ++ ++K G S +++K++VH+F G + HP+ + I + L+ L+ + + GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 725 DT-NSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYIS 783
+ +HDVE +E LL HSEKLA+ FGL+ S + I KNLR+C DCH K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 784 LVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
+ T R IIVRD++RFH F +G CSCGD+W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 200 bits (508), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 209/393 (53%), Gaps = 13/393 (3%)
Query: 117 ASLDDAVSFLIRMRYDDVAPVVYNYTY--------LLKVCGDVGEIRRGKEIHGQLIVNG 168
+SL +S L ++V+P Y+ + +L++C G + K HG++I
Sbjct: 32 SSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRID 91
Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
D+ + ++N Y+KCG +E A ++FD M ER LVSWNT++ + +N ALD+
Sbjct: 92 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 229 RMHEEGRRGDFITIVSILPAVA-NVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKC 287
M EG + TI S+L A N +L K +H +++ D + V TAL+D+YAKC
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 288 GRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEAL 347
G ++ A VF+ M+ ++ V+W+SM+A YV+ N EEA+ ++++ +E T+ +
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 348 HACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLV 407
AC++L L G +H ++ + G++V + +S + MY+KC + + IFS++Q K L
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 408 SWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALV 467
WN +I G+A++ R E + F KM+ + P+ T S++ ++ + L
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL- 389
Query: 468 IRSCF--EKNVFVMTALIDMYAKCGAVGTARAL 498
+R+ + NV + ++D+ + G + A L
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 157/289 (54%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
L++ + K + A +VF+ + ++ ++TM+ Y + +A+ + MR +
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
+ + +L CG + K++H + L+L+ T ++++YAKCG I++A ++F+
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
M ++ V+W+++VAG+ QN E AL L R + T+ S++ A +N+ +L
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
GK +H ++GF S V V+++ VDMYAKCG + + ++F ++ +N+ WN++I+ + +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLL 366
P+E M +F+KM G+ P VT L C G +E G KL+
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 50 CTSLKELRRILPLIIKSGLCDQHLF-QTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHT 108
C +L E +++ L +K+ + D +L+ T L+ L+ K + DA +VFE + DK + +
Sbjct: 176 CDAL-ECKKLHCLSVKTCI-DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 109 MLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNG 168
M+ GY + + ++A+ R + + + + ++ C ++ + GK++H + +G
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 169 FSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVT 228
F ++F + V+MYAKCG + E+Y +F + E++L WNTI++GFA++ + + L
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 229 RMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS--TALVDMYAK 286
+M ++G + +T S+L + G + G+ MR + NV + +VD+ +
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGR 412
Query: 287 CGRVETARLVFDGMKSRNVVS-WNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
G + A + + S W S++A+ N E A +K+ + +EP N
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE--LEPEN 465
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/803 (31%), Positives = 423/803 (52%), Gaps = 81/803 (10%)
Query: 56 LRRILPLIIKSGLCDQHL--FQTKLVS----LFCKYNSLSDAARVFEPIPDKLDALYHTM 109
+ R L L I GL + L T++VS + + SL A ++F+ +P + D ++ +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
+ + + + AV M++ LL+VC + G++IHG ++ G
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPER--------------------------- 202
++ ++ MY++ G++E + K+F+ M +R
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 203 --------DLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGS 254
D+V+WN++++G+A G ++ A+ ++ RM G + +I S+L AVA G
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 255 LRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAA 314
L++GKA+HGY +R V V T L+DMY K G + AR+VFD M ++N+V+WNS+++
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 315 YVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTD 374
++A + +M +G++P +T
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAIT-------------------------------- 328
Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGK----TLVSWNAMILGYAQNGRVNEALNYFC 430
NSL S Y+ K ++A D+ K++ K +VSW A+ G ++NG AL F
Sbjct: 329 ---WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 431 KMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCG 490
KM+ + + P++ TM +++ L LS++ K +H +R + +V TAL+DMY K G
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 491 AVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAIS 550
+ +A +F + + + +WN M+ GY G G+ + F+ MLE +P+ ITF +S
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 551 ACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGI 610
C +SGLV+EG YF ++ YGI P ++H MVDLLGR+G L+EAWDFIQ M ++P
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 611 TVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIM 670
T++GA L +CKIH+++EL E A RL L+P ++++ N+Y+ + W+ + ++R +M
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 671 EKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIH 730
++ S +++ VH FY+ HP IY L L+ E+K +GYVPDT+ IH
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIH 685
Query: 731 -DVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGRE 789
D+ D +E LL H+EKLA+ +GL+ + I + KN +C D H KY+S++ RE
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745
Query: 790 IIVRDMHRFHCFKNGVCSCGDYW 812
I++++ R H F++G CSC D W
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDSW 768
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 225/530 (42%), Gaps = 81/530 (15%)
Query: 36 SRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92
++ Y LL+VC++ E R+I +++ GL L+ ++ + L +
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 93 RVFEPIPDKLDALYHTMLKGYAKFASLDDAVSF--------------------------- 125
+VF + D+ + ++++L Y K +DDA+
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 126 --------LIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMT 177
L RM+ + P + + LL+ + G ++ GK IHG ++ N D++ T
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 178 GVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRG 237
+++MY K G + A +FD M +++V+WN++V+G + + A L+ RM +EG +
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 238 DFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVF 297
D IT +L YA G+ E A V
Sbjct: 325 DAITW-----------------------------------NSLASGYATLGKPEKALDVI 349
Query: 298 DGMKSR----NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADL 353
MK + NVVSW ++ + + GN A+++F KM ++GV P T+ L L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 354 GDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMI 413
L G VH + L D + +L+ MY K + A +IF ++ K+L SWN M+
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 414 LGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFE 473
+GYA GR E + F M ++PD+ T SV+ +++ W + ++RS +
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG-WKYFDLMRSRYG 528
Query: 474 --KNVFVMTALIDMYAKCGAVGTARALFDMMNER-HVTTWNVMIDGYGTH 520
+ + ++D+ + G + A M+ + T W + H
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/632 (37%), Positives = 373/632 (59%), Gaps = 7/632 (1%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
+I G H+ T V+ + ++ A ++FE +P Y+ +++ Y + DA
Sbjct: 41 VITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDA 99
Query: 123 VSFLIRMRYDDV--APVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVV 180
+S IRM + V P Y Y ++ K G++ ++ G +HG+++ + F D + ++
Sbjct: 100 ISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALL 159
Query: 181 NMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFI 240
MY G++E A +FD M RD++SWNT+++G+ +NG+ AL + M E D
Sbjct: 160 AMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHA 219
Query: 241 TIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGM 300
TIVS+LP ++ L +G+ VH + V ALV+MY KCGR++ AR VFD M
Sbjct: 220 TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
Query: 301 KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGI 360
+ R+V++W MI Y E G+ E A+ + + M +GV P VTI + C D + G
Sbjct: 280 ERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Query: 361 FVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNG 420
+H + ++ +D+ + SLISMY+KCK+VD +FS W+A+I G QN
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399
Query: 421 RVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMT 480
V++AL F +MR ++++P+ T+ S++PA A L+ +R A IH + ++ F ++ T
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 481 ALIDMYAKCGAVGTARALFDMMNERH----VTTWNVMIDGYGTHGLGKAAVELFNKMLEG 536
L+ +Y+KCG + +A +F+ + E+H V W +I GYG HG G A+++F +M+
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 537 PTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNE 596
PN+ITF A++ACSHSGLVEEG+ F + + Y +HY +VDLLGRAGRL+E
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 597 AWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAA 656
A++ I +P EP TV+GA+L AC H+NV+LGE AAN+LFEL+P+ G +VLLANIYAA
Sbjct: 580 AYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639
Query: 657 ASMWDKLAKVRTIMEKKGLQKTPGCSLVELKN 688
W + KVR++ME GL+K PG S +E+++
Sbjct: 640 LGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 198/377 (52%), Gaps = 9/377 (2%)
Query: 46 LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
+L VC LK+L R + L+ + L D+ + LV+++ K + +A VF+ + +
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
+ M+ GY + +++A+ M+++ V P L+ VCGD ++ GK +HG
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
+ D+ T +++MYAKC +++ +++F + W+ I+AG QN
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSD 403
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
AL L RM E + T+ S+LPA A + LR +H Y + GF S ++ +T LV
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 283 MYAKCGRVETARLVFDGM----KSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEP 338
+Y+KCG +E+A +F+G+ KS++VV W ++I+ Y G+ A+++F +M+ GV P
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP 523
Query: 339 TNVTIMEALHACADLGDLERGIFVHK-LLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
+T AL+AC+ G +E G+ + + +L+ K + ++ + + ++D A ++
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583
Query: 398 FSKLQGK-TLVSWNAMI 413
+ + + T W A++
Sbjct: 584 ITTIPFEPTSTVWGALL 600
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/683 (33%), Positives = 393/683 (57%), Gaps = 4/683 (0%)
Query: 46 LLEVCTSLKELRRI--LPLIIKS-GLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
L++ C +LK + I L + S G+ + L+ + +Y + +++F+ + K
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
+++ ML GYAK +LD + MR D ++P + +L VC I G ++HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
++V+G + +++MY+KCG+ ++A K+F M D V+WN +++G+ Q+G E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
+L M G D IT S+LP+V+ +L K +H Y MR + +++AL+D
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
Y KC V A+ +F S +VV + +MI+ Y+ G +++ +F+ ++ + P +T
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 343 IMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQ 402
++ L L L+ G +H + + ++ ++I MY+KC +++ A +IF +L
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 403 GKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKW 462
+ +VSWN+MI AQ+ + A++ F +M I D ++ + + A A L + K
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA 563
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGL 522
IH +I+ +V+ + LIDMYAKCG + A +F M E+++ +WN +I G HG
Sbjct: 564 IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGK 623
Query: 523 GKAAVELFNKMLEGP-TKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHY 581
K ++ LF++M+E +P+ ITFL IS+C H G V+EG+ +F S+ +DYGI+P +HY
Sbjct: 624 LKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY 683
Query: 582 GAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDP 641
+VDL GRAGRL EA++ ++ MP P V+G +LGAC++HKNVEL E A+++L +LDP
Sbjct: 684 ACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDP 743
Query: 642 DEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHP 701
GY+VL++N +A A W+ + KVR++M+++ +QK PG S +E+ H F SG HP
Sbjct: 744 SNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHP 803
Query: 702 QSKRIYTFLETLIDEIKAAGYVP 724
+S IY+ L +L+ E++ GY+P
Sbjct: 804 ESSHIYSLLNSLLGELRLEGYIP 826
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/661 (24%), Positives = 325/661 (49%), Gaps = 35/661 (5%)
Query: 34 IPSRIYRHPSALLLEVCTS---LKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSD 90
IP R+ +LLL+ C++ L++ +++ +I + + +++ ++ S SD
Sbjct: 34 IPRRL-----SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 91 AARVFEPIPDKLDAL--YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVC 148
++F + + ++ +++++ + + L+ A++F +M V+P V + L+K C
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 149 GDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWN 208
+ + + + G + F + ++ Y + G+I+ K+FDR+ ++D V WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 209 TIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA 268
++ G+A+ G + + + M + + +T +L A+ + +G +HG + +
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 269 GFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIF 328
G D ++ +L+ MY+KCGR + A +F M + V+WN MI+ YV+ G EE++ F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 329 QKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKC 388
+M+ GV P +T L + + +LE +H + + + D+ +T++LI Y KC
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 389 KKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVI 448
+ V A +IFS+ +V + AMI GY NG ++L F + I P+ T+VS++
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 449 PALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVT 508
P + L ++ + +H +I+ F+ + A+IDMYAKCG + A +F+ +++R +
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Query: 509 TWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSH--SGLVEEGIHYFT 566
+WN MI AA+++F +M + ++ A+SAC++ S + IH F
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 567 ---SLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIH 623
SL D E ++D+ + G L A + + M E I + +++ AC H
Sbjct: 569 IKHSLASDVYSE------STLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Query: 624 KNV--------ELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGL 675
+ E+ EK+ R PD+ + ++++ + + + R++ E G+
Sbjct: 622 GKLKDSLCLFHEMVEKSGIR-----PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 676 Q 676
Q
Sbjct: 677 Q 677
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/557 (42%), Positives = 333/557 (59%), Gaps = 3/557 (0%)
Query: 259 KAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEG 318
K +H +R GF ++ T L++ G + AR VFD M + WN++ YV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 319 GNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMT 378
P E++ +++KM D GV P T + A + LGD G +H + + G +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 379 NSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIK 438
L+ MY K ++ A +F +Q K LV+WNA + Q G AL YF KM + ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 439 PDSFTMVSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARAL 498
DSFT+VS++ A +L + + I+ + + N+ V A +DM+ KCG AR L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 499 FDMMNERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLV 558
F+ M +R+V +W+ MI GY +G + A+ LF M +PN +TFL +SACSH+GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 559 EEGIHYFTSL--KKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAM 616
EG YF+ + D +EP +HY MVDLLGR+G L EA++FI+KMP+EP ++GA+
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 617 LGACKIHKNVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQ 676
LGAC +H+++ LG+K A+ L E PD G YHVLL+NIYAAA WD + KVR+ M K G +
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 677 KTPGCSLVELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSI-HDVEDY 735
K S VE + ++H F G HPQSK IY L+ ++ +I+ GYVPDT S+ HDVE
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507
Query: 736 VQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 795
+E LS HSEKLAIAFGL+ PG I + KNLR C DCH +K++S +T EII+RD
Sbjct: 508 EKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDK 567
Query: 796 HRFHCFKNGVCSCGDYW 812
+RFH F+NGVCSC ++W
Sbjct: 568 NRFHHFRNGVCSCKEFW 584
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 170/317 (53%)
Query: 43 SALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
S LL + K+L++I +++++G +++ T+L+ + A +VF+ +
Sbjct: 14 SELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
L++T+ KGY + +++ +MR V P + Y +++K +G+ G +H
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
++ GF T +V MY K G++ A +F+ M +DLV+WN +A Q G + +
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
AL+ +M + + D T+VS+L A +GSL IG+ ++ A + D + V A +D
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVT 342
M+ KCG E AR++F+ MK RNVVSW++MI Y G+ EA+ +F M ++G+ P VT
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 343 IMEALHACADLGDLERG 359
+ L AC+ G + G
Sbjct: 314 FLGVLSACSHAGLVNEG 330
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 197/396 (49%), Gaps = 31/396 (7%)
Query: 158 KEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQN 217
K+IH ++ GFS +T ++ G + A ++FD M + + WNT+ G+ +N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 218 GFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS 277
+L L +M + G R D T ++ A++ +G G A+H + ++ GF + V+
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 278 TALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVE 337
T LV MY K G + +A +F+ M+ +++V+WN+ +A V+ GN A+ F KM V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 338 PTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADI 397
+ T++ L AC LG LE G ++ + ++ ++ + N+ + M+ KC + A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 398 FSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI 457
F +++ + +VSW+ MI+GYA NG EAL F M+++ ++P+ T + V+ A + ++
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 458 RYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGY 517
K +L+++S +KN+ E + M+D
Sbjct: 328 NEGKRYFSLMVQSN-DKNL---------------------------EPRKEHYACMVDLL 359
Query: 518 GTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACS 553
G GL + A E KM P +P+ + + AC+
Sbjct: 360 GRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA 392
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 3/234 (1%)
Query: 63 IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDA 122
++K G + T+LV ++ K+ LS A +FE + K ++ L + + A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 123 VSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNM 182
+ + +M D V + +L CG +G + G+EI+ + ++ ++M
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254
Query: 183 YAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITI 242
+ KCG E A +F+ M +R++VSW+T++ G+A NG + AL L T M EG R +++T
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Query: 243 VSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVS---TALVDMYAKCGRVETA 293
+ +L A ++ G + GK +++ ++ +VD+ + G +E A
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 362/651 (55%), Gaps = 69/651 (10%)
Query: 160 IHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP------------------- 200
+H +I +GFS ++F +++ Y+KCG +E+ ++FD+MP
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 201 ------------ERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPA 248
ERD +WN++V+GFAQ+ E AL MH+EG + + S+L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 249 VANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSW 308
+ + + G VH ++ F S V + +ALVDMY+KCG V A+ VFD M RNVVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 309 NSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVH-KLLD 367
NS+I + + G EA+ +FQ ML+ VEP VT+ + ACA L ++ G VH +++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 368 QLKLGTDVSMTNSLISMYSKCKKVDRAADIF----------------------------- 398
KL D+ ++N+ + MY+KC ++ A IF
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 399 --SKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSV 456
+K+ + +VSWNA+I GY QNG EAL+ FC ++ +++ P ++ +++ A A+L+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 457 IRYAKWIHALVIRSCF------EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTW 510
+ H V++ F E ++FV +LIDMY KCG V +F M ER +W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 511 NVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKK 570
N MI G+ +G G A+ELF +MLE KP+ IT + +SAC H+G VEEG HYF+S+ +
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 571 DYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGE 630
D+G+ P+ DHY MVDLLGRAG L EA I++MP++P ++G++L ACK+H+N+ LG+
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 631 KAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEV 690
A +L E++P G +VLL+N+YA W+ + VR M K+G+ K PGCS ++++
Sbjct: 582 YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD 641
Query: 691 HSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLL 741
H F HP+ K+I++ L+ LI E++ + S+ E NLL
Sbjct: 642 HVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSLSSEEMDYSSNLL 692
Score = 256 bits (654), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 282/577 (48%), Gaps = 91/577 (15%)
Query: 42 PSALLLEVCTSLK----ELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
P A LL+ C K +R + +IKSG ++ Q +L+ + K SL D +VF+
Sbjct: 21 PFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 98 IP--------------------DKLDALY-----------HTMLKGYAKFASLDDAVSFL 126
+P D+ D+L+ ++M+ G+A+ ++A+ +
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 127 IRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKC 186
M + Y++ +L C + ++ +G ++H + + F D++ + +V+MY+KC
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 187 GQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSIL 246
G + +A ++FD M +R++VSWN+++ F QNG A ALD+ M E D +T+ S++
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 247 PAVANVGSLRIGKAVHGYAMRAGFDSIVN---VSTALVDMYAKCGRVETARLVFDGMK-- 301
A A++ ++++G+ VHG ++ D + N +S A VDMYAKC R++ AR +FD M
Sbjct: 261 SACASLSAIKVGQEVHGRVVKN--DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 302 -----------------------------SRNVVSWNSMIAAYVEGGNPEEAMRIFQKML 332
RNVVSWN++IA Y + G EEA+ +F +
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 333 DQGVEPTNVTIMEALHACADLGDLERGI--FVHKLLDQLKLGT----DVSMTNSLISMYS 386
+ V PT+ + L ACADL +L G+ VH L K + D+ + NSLI MY
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 387 KCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVS 446
KC V+ +F K+ + VSWNAMI+G+AQNG NEAL F +M KPD TM+
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 447 VIPALAELSVIRYAKWIHALVIRSCFEKNVFVM----TALIDMYAKCGAVGTARALFDMM 502
V+ A + + + + R + V + T ++D+ + G + A+++ + M
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTR---DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 503 N-ERHVTTWNVMIDGYGTH---GLGKAAVELFNKMLE 535
+ W ++ H LGK E K+LE
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAE---KLLE 589
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 153/299 (51%), Gaps = 14/299 (4%)
Query: 50 CTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTM 109
C+ +KE R I S + +T ++S + S A +F + ++ ++ +
Sbjct: 302 CSRIKEAR----FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
+ GY + ++A+S ++ + V P Y++ +LK C D+ E+ G + H ++ +GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 170 SL------DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELA 223
D+F +++MY KCG +EE Y +F +M ERD VSWN ++ GFAQNG+ A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRA-GFDSIVNVSTALVD 282
L+L M E G + D IT++ +L A + G + G+ R G + + T +VD
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 283 MYAKCGRVETARLVFDGMKSR-NVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN 340
+ + G +E A+ + + M + + V W S++AA N + +K+L+ VEP+N
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE--VEPSN 594
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/706 (33%), Positives = 386/706 (54%), Gaps = 11/706 (1%)
Query: 110 LKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGF 169
L +K L++A FL M V+ Y+Y L + C ++ + G+ +H ++ +
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIE 114
Query: 170 SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTR 229
+ + V+ MY +C +E+A K+FD M E + VS T+++ +A+ G + A+ L +
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 230 MHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGR 289
M G + ++L ++ N +L G+ +H + +RAG S ++ T +V+MY KCG
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 290 VETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHA 349
+ A+ VFD M + V+ ++ Y + G +A+++F ++ +GVE + L A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 350 CADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSW 409
CA L +L G +H + +L L ++VS+ L+ Y KC + A F +++ VSW
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKP-DSFTMVSVIPALAELSVIRYAKWIHALVI 468
+A+I GY Q + EA+ F +RSKN +SFT S+ A + L+ +HA I
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 469 RSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVE 528
+ + + +ALI MY+KCG + A +F+ M+ + W I G+ +G A+
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 529 LFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLL 588
LF KM+ KPN +TF+ ++ACSH+GLVE+G H ++ + Y + P +DHY M+D+
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534
Query: 589 GRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHV 648
R+G L+EA F++ MP EP + L C HKN+ELGE A L +LDP++ +V
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Query: 649 LLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTKHPQSKRIYT 708
L N+Y A W++ A++ +M ++ L+K CS ++ K ++H F G HPQ++ IY
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE 654
Query: 709 FLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSHSEKLAIAFGLLN--SSPGSTIHIR 766
L+ ++ + + +E LL HSE+LAIAFGL++ + + I +
Sbjct: 655 KLKEFDGFMEGDMFQCNMTE-------RREQLL-DHSERLAIAFGLISVHGNAPAPIKVF 706
Query: 767 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
KNLR C DCH K++SLVTG EI++RD RFH FK G CSC DYW
Sbjct: 707 KNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 242/497 (48%), Gaps = 9/497 (1%)
Query: 46 LLEVCTSLKELR--RILPLIIKSGLCDQH-LFQTKLVSLFCKYNSLSDAARVFEPIPDKL 102
L E C L+ L R+L ++ G+ + L Q ++ ++C+ SL DA ++F+ + +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 103 DALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHG 162
TM+ YA+ LD AV M P YT LLK + + G++IH
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 163 QLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAEL 222
+I G + TG+VNMY KCG + A ++FD+M + V+ ++ G+ Q G A
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 223 ALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVD 282
AL L + EG D +L A A++ L +GK +H + G +S V+V T LVD
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 283 MYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTN-V 341
Y KC E+A F ++ N VSW+++I+ Y + EEA++ F+ + + N
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 342 TIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKL 401
T AC+ L D G VH + L ++LI+MYSKC +D A ++F +
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448
Query: 402 QGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAK 461
+V+W A I G+A G +EAL F KM S +KP+S T ++V+ A + ++ K
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 462 -WIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTA-RALFDMMNERHVTTWNVMIDGYGT 519
+ ++ + + +ID+YA+ G + A + + +M E +W + G T
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 520 HG---LGKAAVELFNKM 533
H LG+ A E ++
Sbjct: 569 HKNLELGEIAGEELRQL 585
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 410 NAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIR 469
N ++ +++ ++NEA + +M + S++ + A EL + + + +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 470 SCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVEL 529
+V + ++ MY +C ++ A LFD M+E + + MI Y G+ AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 530 FNKMLEGPTKP 540
F+ ML KP
Sbjct: 172 FSGMLASGDKP 182
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/652 (37%), Positives = 378/652 (57%), Gaps = 16/652 (2%)
Query: 42 PSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEPIPDK 101
P LLL CT++ LR+ ++ +GL TKLVSL+ + DA VF+ IP+
Sbjct: 46 PCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 102 LDALYHTMLKGYAKFASLDDAV---SFLIR--MRYDDVAPVVYNYTYLLKVCGDVGEIRR 156
L+ ML+ Y + V L++ RYDD+ ++ LK C ++ ++
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV-----FSKALKACTELQDLDN 160
Query: 157 GKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQ 216
GK+IH QL V S D +TG+++MYAKCG+I+ A+K+F+ + R++V W +++AG+ +
Sbjct: 161 GKKIHCQL-VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 217 NGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNV 276
N E L L RM E G+ T +++ A + +L GK HG +++G + +
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 277 STALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGV 336
T+L+DMY KCG + AR VF+ ++V W +MI Y G+ EA+ +FQKM +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 337 EPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGT-DVSMTNSLISMYSKCKKVDRAA 395
+P VTI L C + +LE G VH L +K+G D ++ N+L+ MY+KC + A
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNVANALVHMYAKCYQNRDAK 397
Query: 396 DIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELS 455
+F K +V+WN++I G++QNG ++EAL F +M S+++ P+ T+ S+ A A L
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 456 VIRYAKWIHALVIRSCF--EKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVM 513
+ +HA ++ F +V V TAL+D YAKCG +AR +FD + E++ TW+ M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 514 IDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYG 573
I GYG G ++ELF +ML+ KPN+ TF +SAC H+G+V EG YF+S+ KDY
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 574 IEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAA 633
P HY MVD+L RAG L +A D I+KMPI+P + FGA L C +H +LGE
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 634 NRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVE 685
++ +L PD+ Y+VL++N+YA+ W++ +VR +M+++GL K G S +E
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 376/643 (58%), Gaps = 18/643 (2%)
Query: 172 DLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMH 231
++ + G+V+ Y K I EA +F+ MPER++VSW +V G+ Q G A L RM
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 232 EEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVE 291
E ++ + + + G RI KA Y M D V ST ++ + GRV+
Sbjct: 138 ERNE----VSWTVMFGGLIDDG--RIDKARKLYDMMPVKD--VVASTNMIGGLCREGRVD 189
Query: 292 TARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACA 351
ARL+FD M+ RNVV+W +MI Y + + A ++F+ M E T V+ L
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGYT 245
Query: 352 DLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNA 411
G +E + + + + V N++I + + ++ +A +F ++ + +W
Sbjct: 246 LSGRIEDA---EEFFEVMPM-KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 412 MILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIHALVIRSC 471
MI Y + G EAL+ F +M+ + ++P +++S++ A L+ ++Y + +HA ++R
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 472 FEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGKAAVELFN 531
F+ +V+V + L+ MY KCG + A+ +FD + + + WN +I GY +HGLG+ A+++F+
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 532 KMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAMVDLLGRA 591
+M T PN +T + ++ACS++G +EEG+ F S++ + + P ++HY VD+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 592 GRLNEAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEKAANRLFELDPDEGGYHVLLA 651
G++++A + I+ M I+P TV+GA+LGACK H ++L E AA +LFE +PD G +VLL+
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 652 NIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLVELKNEVHSFYSGSTK-HPQSKRIYTFL 710
+I A+ S W +A VR M + K PGCS +E+ +VH F G K HP+ I L
Sbjct: 542 SINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
Query: 711 ETLIDEIKAAGYVPD-TNSIHDVEDYVQENLLSSHSEKLAIAFGLLNSSPGSTIHIRKNL 769
E ++ AGY PD ++ +HDV++ + + LS HSE+LA+A+GLL G I + KNL
Sbjct: 602 EKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNL 661
Query: 770 RVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNGVCSCGDYW 812
RVCGDCH A K IS VT REII+RD +RFH F NG CSC DYW
Sbjct: 662 RVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 226/477 (47%), Gaps = 19/477 (3%)
Query: 78 LVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPV 137
LVS + K + +A VFE +P++ + M+KGY + + +A S RM +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-- 142
Query: 138 VYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFD 197
++T + D G I + ++++ + V D+ A T ++ + G+++EA +FD
Sbjct: 143 --SWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFD 196
Query: 198 RMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRI 257
M ER++V+W T++ G+ QN ++A L M E+ ++ S+L G RI
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSG--RI 250
Query: 258 GKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVE 317
A + + I A++ + + G + AR VFD M+ R+ +W MI AY
Sbjct: 251 EDAEEFFEVMPMKPVI--ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308
Query: 318 GGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSM 377
G EA+ +F +M QGV P+ +++ L CA L L+ G VH L + + DV +
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 378 TNSLISMYSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNI 437
+ L++MY KC ++ +A +F + K ++ WN++I GYA +G EAL F +M S
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 438 KPDSFTMVSVIPALAELSVIRYAKWI-HALVIRSCFEKNVFVMTALIDMYAKCGAVGTAR 496
P+ T+++++ A + + I ++ + C V + +DM + G V A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 497 ALFDMMN-ERHVTTWNVMIDGYGTHGLGKAAVELFNKMLEG-PTKPNDITFLCAISA 551
L + M + T W ++ TH A K+ E P L +I+A
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 41/352 (11%)
Query: 76 TKLVSLFCKYNSLSDAARVFEPIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVA 135
T +++ + + N + A ++FE +P+K + + +ML GY ++DA F M +
Sbjct: 207 TTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMK 263
Query: 136 PVVYNYTYLLKVCGDVGEIRRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKM 195
PV+ A ++ + + G+I +A ++
Sbjct: 264 PVI------------------------------------ACNAMIVGFGEVGEISKARRV 287
Query: 196 FDRMPERDLVSWNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSL 255
FD M +RD +W ++ + + GF ALDL +M ++G R F +++SIL A + SL
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 256 RIGKAVHGYAMRAGFDSIVNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAY 315
+ G+ VH + +R FD V V++ L+ MY KCG + A+LVFD S++++ WNS+I+ Y
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 316 VEGGNPEEAMRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTD 374
G EEA++IF +M G P VT++ L AC+ G LE G+ + + ++ + +
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 375 VSMTNSLISMYSKCKKVDRAADIFSKLQGKTLVS-WNAMILGYAQNGRVNEA 425
V + + M + +VD+A ++ + K + W A++ + R++ A
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 56/313 (17%)
Query: 285 AKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTIM 344
++ G++ AR FD ++ + + SWNS+++ Y G P+EA ++F +M ++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER---------- 77
Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
+V N L+S Y K + + A ++F + +
Sbjct: 78 -----------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPER 108
Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
+VSW AM+ GY Q G V EA + F +M +N + + L + I A+ ++
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKLY 164
Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
++ K+V T +I + G V AR +FD M ER+V TW MI GY +
Sbjct: 165 DMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHYFTSLKKDYGIEPVMDHYGAM 584
A +LF M E ++++ + + SG +E+ +F + ++PV+ AM
Sbjct: 221 VARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVI-ACNAM 271
Query: 585 VDLLGRAGRLNEA 597
+ G G +++A
Sbjct: 272 IVGFGEVGEISKA 284
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 141/329 (42%), Gaps = 46/329 (13%)
Query: 256 RIGKAVHGYAMRAGFDSI----VNVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSM 311
RIGK R FDS+ + ++V Y G + AR +FD M RNVVSWN +
Sbjct: 29 RIGKINEA---RKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 312 IAAYVEGGNPEEAMRIFQKMLDQGV---------------------------EPTNVTIM 344
++ Y++ EA +F+ M ++ V E V+
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWT 145
Query: 345 EALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQGK 404
D G +++ KL D + + DV + ++I + +VD A IF +++ +
Sbjct: 146 VMFGGLIDDGRIDKA---RKLYDMMPV-KDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 405 TLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVIRYAKWIH 464
+V+W MI GY QN RV+ A F M K + S++ I A+
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 465 ALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNERHVTTWNVMIDGYGTHGLGK 524
++ K V A+I + + G + AR +FD+M +R TW MI Y G
Sbjct: 258 EVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 525 AAVELFNKMLEGPTKPNDITFLCAISACS 553
A++LF +M + +P+ + + +S C+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 113/266 (42%), Gaps = 28/266 (10%)
Query: 42 PSAL-LLEVCTSLKEL---RRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFEP 97
PS + +L VC +L L R++ +++ D + L++++ K L A VF+
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 98 IPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRG 157
K ++++++ GYA ++A+ M P +L C G++ G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 158 KEIHGQLIVNGF----SLDLFAMTGVVNMYAKCGQIEEAYKMFDRMP-ERDLVSWNTIVA 212
EI + + + F +++ ++ T V+M + GQ+++A ++ + M + D W ++
Sbjct: 452 LEIF-ESMESKFCVTPTVEHYSCT--VDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 213 GFAQNGFAELALDLVTRM--HEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGF 270
+ +LA ++ +E G ++ + SI + + G + + +
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK---------- 558
Query: 271 DSIVNVSTALVDMYAKCGRVETARLV 296
N+ T V + C +E + V
Sbjct: 559 ----NMRTNNVSKFPGCSWIEVGKKV 580
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/608 (37%), Positives = 357/608 (58%), Gaps = 7/608 (1%)
Query: 207 WNTIVAGFAQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAM 266
WN + A ++ L M G D + IL + A++ G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 267 RAGFDSIVNVSTALVDMYAKCGRVETARLVFD--GMKSRNVVSWNSMIAAYVEGGNPEEA 324
+ G ++ V TAL+ MY KCG V AR VF+ S+ V +N++I+ Y +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 325 MRIFQKMLDQGVEPTNVTIMEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISM 384
+F++M + GV +VT++ + C L G +H + L ++V++ NS I+M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 385 YSKCKKVDRAADIFSKLQGKTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTM 444
Y KC V+ +F ++ K L++WNA+I GY+QNG + L + +M+S + PD FT+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 445 VSVIPALAELSVIRYAKWIHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMNE 504
VSV+ + A L + + LV + F NVFV A I MYA+CG + ARA+FD+M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 505 RHVTTWNVMIDGYGTHGLGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGIHY 564
+ + +W MI YG HG+G+ + LF+ M++ +P+ F+ +SACSHSGL ++G+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 565 FTSLKKDYGIEPVMDHYGAMVDLLGRAGRLNEAWDFIQKMPIEPGITVFGAMLGACKIHK 624
F ++K++Y +EP +HY +VDLLGRAGRL+EA +FI+ MP+EP V+GA+LGACKIHK
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 625 NVELGEKAANRLFELDPDEGGYHVLLANIYAAASMWDKLAKVRTIMEKKGLQKTPGCSLV 684
NV++ E A ++ E +P+ GY+VL++NIY+ + + + ++R +M ++ +K PG S V
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 685 ELKNEVHSFYSGSTKHPQSKRIYTFLETLIDEIKAAGYVPDTNSIHDVEDYVQENLLSSH 744
E K VH F +G H Q++ ++ L+ L + D + +V +E H
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE-----H 555
Query: 745 SEKLAIAFGLLNSSPGSTIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHCFKNG 804
SE+LAIAFG+LNS PG+ I + KNLRVC DCH K +S + R+ +VRD RFH FK+G
Sbjct: 556 SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDG 615
Query: 805 VCSCGDYW 812
VCSC DYW
Sbjct: 616 VCSCKDYW 623
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 226/461 (49%), Gaps = 6/461 (1%)
Query: 106 YHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEIRRGKEIHGQLI 165
++ L+ A + +++S M +P +++ ++LK C + G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 166 VNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVS--WNTIVAGFAQNGFAELA 223
G + F +T +++MY KCG + +A K+F+ P+ +S +N +++G+ N A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 224 LDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIVNVSTALVDM 283
+ RM E G D +T++ ++P L +G+++HG ++ G DS V V + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 284 YAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQGVEPTNVTI 343
Y KCG VE R +FD M + +++WN++I+ Y + G + + ++++M GV P T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 344 MEALHACADLGDLERGIFVHKLLDQLKLGTDVSMTNSLISMYSKCKKVDRAADIFSKLQG 403
+ L +CA LG + G V KL++ +V ++N+ ISMY++C + +A +F +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 404 KTLVSWNAMILGYAQNGRVNEALNYFCKMRSKNIKPDSFTMVSVIPALAELSVI-RYAKW 462
K+LVSW AMI Y +G L F M + I+PD V V+ A + + + +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 463 IHALVIRSCFEKNVFVMTALIDMYAKCGAVGTARALFDMMN-ERHVTTWNVMIDGYGTHG 521
A+ E + L+D+ + G + A + M E W ++ H
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 522 LGKAAVELFNKMLEGPTKPNDITFLCAISACSHSGLVEEGI 562
A F K++E +PN+I + +S +EGI
Sbjct: 441 NVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGI 479
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 16/368 (4%)
Query: 45 LLLEVCTSLKELRRILPL--------IIKSGLCDQHLFQTKLVSLFCKYNSLSDAARVFE 96
+L+ C SL LP+ + K G + T L+S++CK ++DA +VFE
Sbjct: 58 FILKSCASLS-----LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE 112
Query: 97 --PIPDKLDALYHTMLKGYAKFASLDDAVSFLIRMRYDDVAPVVYNYTYLLKVCGDVGEI 154
P +L Y+ ++ GY + + DA RM+ V+ L+ +C +
Sbjct: 113 ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Query: 155 RRGKEIHGQLIVNGFSLDLFAMTGVVNMYAKCGQIEEAYKMFDRMPERDLVSWNTIVAGF 214
G+ +HGQ + G ++ + + MY KCG +E ++FD MP + L++WN +++G+
Sbjct: 173 WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY 232
Query: 215 AQNGFAELALDLVTRMHEEGRRGDFITIVSILPAVANVGSLRIGKAVHGYAMRAGFDSIV 274
+QNG A L+L +M G D T+VS+L + A++G+ +IG V GF V
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 275 NVSTALVDMYAKCGRVETARLVFDGMKSRNVVSWNSMIAAYVEGGNPEEAMRIFQKMLDQ 334
VS A + MYA+CG + AR VFD M +++VSW +MI Y G E + +F M+ +
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 335 GVEPTNVTIMEALHACADLGDLERGIFVHKLLD-QLKLGTDVSMTNSLISMYSKCKKVDR 393
G+ P + L AC+ G ++G+ + + + + KL + L+ + + ++D
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 394 AADIFSKL 401
A + +
Sbjct: 413 AMEFIESM 420
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,018,118
Number of Sequences: 539616
Number of extensions: 12326944
Number of successful extensions: 39593
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 29707
Number of HSP's gapped (non-prelim): 2477
length of query: 812
length of database: 191,569,459
effective HSP length: 126
effective length of query: 686
effective length of database: 123,577,843
effective search space: 84774400298
effective search space used: 84774400298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)