Your job contains 1 sequence.
>003533
MNPMDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNF
EKTGNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVT
LSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPS
GWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDL
EGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESG
QDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVD
LNMQLTKLAHGLLSGKYSVPAQEKDAAANAATTTDTKQEGIPPRMFKAVIAASHPEFSSM
RQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLG
IPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYST
ALKAKTTATKSAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGLQ
PGEELLPEGGPEDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLL
SHMDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN
PDASTSSDMDAATSSTAQTPADAGLPDGGGSKFLKHILAYFIPNLYMLSVLHASFANNHC
EILDYVLTILAVALLCVRCLPYWKVCLLLLLH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003533
(812 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083440 - symbol:UBP14 "ubiquitin-specific pro... 2753 1.4e-286 1
RGD|1308438 - symbol:Usp5 "ubiquitin specific peptidase 5... 1476 9.8e-172 2
MGI|MGI:1347343 - symbol:Usp5 "ubiquitin specific peptida... 1474 2.0e-171 2
UNIPROTKB|F1N3P2 - symbol:USP5 "Ubiquitin carboxyl-termin... 1466 1.4e-170 2
UNIPROTKB|F1P9P5 - symbol:USP5 "Ubiquitin carboxyl-termin... 1658 1.5e-170 1
UNIPROTKB|P45974 - symbol:USP5 "Ubiquitin carboxyl-termin... 1463 3.0e-170 2
UNIPROTKB|F1SLU6 - symbol:USP5 "Ubiquitin carboxyl-termin... 1459 7.8e-170 2
UNIPROTKB|E1C8W4 - symbol:USP5 "Ubiquitin carboxyl-termin... 1638 2.0e-168 1
UNIPROTKB|E1BMF7 - symbol:USP13 "Ubiquitin carboxyl-termi... 1384 1.5e-155 2
UNIPROTKB|Q92995 - symbol:USP13 "Ubiquitin carboxyl-termi... 1382 1.9e-155 2
ZFIN|ZDB-GENE-040426-2584 - symbol:usp5 "ubiquitin specif... 1362 3.0e-155 2
UNIPROTKB|E2R7B0 - symbol:USP13 "Ubiquitin carboxyl-termi... 1380 3.9e-155 2
MGI|MGI:1919857 - symbol:Usp13 "ubiquitin specific peptid... 1372 1.7e-154 2
UNIPROTKB|E1BY77 - symbol:USP13 "Ubiquitin carboxyl-termi... 1358 1.2e-153 2
FB|FBgn0035402 - symbol:CG12082 species:7227 "Drosophila ... 1272 1.9e-153 2
RGD|1306044 - symbol:Usp13 "ubiquitin specific peptidase ... 1333 3.6e-150 2
DICTYBASE|DDB_G0291239 - symbol:ubpA "putative ubiquitin ... 1352 4.0e-138 1
UNIPROTKB|F6V6I0 - symbol:usp13 "Ubiquitin carboxyl-termi... 1254 8.5e-134 2
UNIPROTKB|I3LGW9 - symbol:LOC100524648 "Uncharacterized p... 927 4.3e-93 1
POMBASE|SPBC6B1.06c - symbol:ubp14 "ubiquitin C-terminal ... 674 8.1e-87 2
CGD|CAL0005412 - symbol:orf19.1516 species:5476 "Candida ... 613 8.3e-81 2
ASPGD|ASPL0000068862 - symbol:AN7422 species:162425 "Emer... 527 6.6e-77 2
WB|WBGene00020839 - symbol:usp-5 species:6239 "Caenorhabd... 701 4.7e-74 2
UNIPROTKB|G4MXB0 - symbol:MGG_08270 "Ubiquitin carboxyl-t... 686 1.5e-67 1
GENEDB_PFALCIPARUM|PFD0680c - symbol:PFD0680c "ubiquitin ... 494 1.5e-55 2
UNIPROTKB|Q8I1U8 - symbol:PFD0680c "Ubiquitin carboxyl-te... 494 1.5e-55 2
UNIPROTKB|H7C5J3 - symbol:USP13 "Ubiquitin carboxyl-termi... 494 6.8e-47 1
SGD|S000000262 - symbol:UBP14 "Ubiquitin-specific proteas... 252 2.8e-42 3
UNIPROTKB|F1SGC5 - symbol:USP13 "Uncharacterized protein"... 442 4.5e-41 1
ZFIN|ZDB-GENE-050227-1 - symbol:fbxl22 "F-box and leucine... 168 5.3e-09 1
RGD|1308852 - symbol:Usp3 "ubiquitin specific peptidase 3... 161 3.0e-08 1
UNIPROTKB|F1P4C5 - symbol:USP44 "Ubiquitin carboxyl-termi... 107 8.5e-08 3
ZFIN|ZDB-GENE-040426-774 - symbol:usp44 "ubiquitin specif... 107 1.2e-07 3
UNIPROTKB|F8VRI7 - symbol:USP44 "Ubiquitin carboxyl-termi... 95 2.6e-07 3
UNIPROTKB|E2QZQ0 - symbol:USP3 "Ubiquitin carboxyl-termin... 152 2.9e-07 1
UNIPROTKB|Q9H0E7 - symbol:USP44 "Ubiquitin carboxyl-termi... 95 3.1e-07 3
UNIPROTKB|Q9Y6I4 - symbol:USP3 "Ubiquitin carboxyl-termin... 151 3.7e-07 1
MGI|MGI:2152450 - symbol:Usp3 "ubiquitin specific peptida... 150 4.8e-07 1
UNIPROTKB|F1N0I6 - symbol:USP3 "Ubiquitin carboxyl-termin... 149 6.2e-07 1
UNIPROTKB|E2RP15 - symbol:USP49 "Ubiquitin carboxyl-termi... 103 1.5e-06 3
UNIPROTKB|Q5T3E1 - symbol:USP49 "Ubiquitin carboxyl-termi... 103 1.7e-06 3
UNIPROTKB|E2R0T7 - symbol:USP44 "Ubiquitin carboxyl-termi... 99 2.3e-06 3
UNIPROTKB|E2R0W7 - symbol:USP44 "Ubiquitin carboxyl-termi... 99 2.9e-06 3
UNIPROTKB|Q70CQ1 - symbol:USP49 "Ubiquitin carboxyl-termi... 103 3.1e-06 3
UNIPROTKB|Q0V9G5 - symbol:usp44 "Ubiquitin carboxyl-termi... 95 3.6e-06 3
UNIPROTKB|F1RUW2 - symbol:USP49 "Ubiquitin carboxyl-termi... 103 4.7e-06 3
UNIPROTKB|D2HBJ8 - symbol:USP44 "Ubiquitin carboxyl-termi... 96 4.7e-06 3
UNIPROTKB|I3LRM6 - symbol:I3LRM6 "Ubiquitin carboxyl-term... 103 4.8e-06 2
UNIPROTKB|E1BLZ0 - symbol:USP44 "Ubiquitin carboxyl-termi... 94 7.6e-06 3
UNIPROTKB|I3LA47 - symbol:USP44 "Ubiquitin carboxyl-termi... 95 9.5e-06 3
MGI|MGI:2685391 - symbol:Usp49 "ubiquitin specific peptid... 101 1.2e-05 3
RGD|1308216 - symbol:Usp44 "ubiquitin specific peptidase ... 86 2.1e-05 3
UNIPROTKB|I3LUD5 - symbol:UBXN1 "Uncharacterized protein"... 130 2.5e-05 1
UNIPROTKB|E1BGQ9 - symbol:USP49 "Ubiquitin carboxyl-termi... 96 2.6e-05 3
ZFIN|ZDB-GENE-030131-792 - symbol:ubxn1 "UBX domain prote... 129 3.2e-05 1
MGI|MGI:3045318 - symbol:Usp44 "ubiquitin specific peptid... 89 3.2e-05 3
UNIPROTKB|Q32KW2 - symbol:UBXN1 "UBX domain-containing pr... 129 3.3e-05 1
UNIPROTKB|Q04323 - symbol:UBXN1 "UBX domain-containing pr... 129 3.3e-05 1
MGI|MGI:1289301 - symbol:Ubxn1 "UBX domain protein 1" spe... 129 3.3e-05 1
RGD|1309471 - symbol:Ubxn1 "UBX domain protein 1" species... 129 3.3e-05 1
UNIPROTKB|Q499N6 - symbol:Ubxn1 "UBX domain-containing pr... 129 3.3e-05 1
UNIPROTKB|D4A4F5 - symbol:D4A4F5 "Ubiquitin carboxyl-term... 133 3.4e-05 1
UNIPROTKB|F1NQJ6 - symbol:USP3 "Ubiquitin carboxyl-termin... 132 4.4e-05 1
RGD|1310513 - symbol:Usp49 "ubiquitin specific peptidase ... 101 6.1e-05 3
WB|WBGene00013506 - symbol:usp-3 species:6239 "Caenorhabd... 91 6.5e-05 2
UNIPROTKB|Q6JHV3 - symbol:USP3 "Ubiquitin carboxyl-termin... 126 0.00018 1
ZFIN|ZDB-GENE-050208-484 - symbol:usp49 "ubiquitin specif... 98 0.00018 2
UNIPROTKB|H0YMI4 - symbol:USP3 "Ubiquitin carboxyl-termin... 124 0.00031 1
>TAIR|locus:2083440 [details] [associations]
symbol:UBP14 "ubiquitin-specific protease 14"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0016579
"protein deubiquitination" evidence=IDA] [GO:0048767 "root hair
elongation" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0048767 GO:GO:0009793
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0008242
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 EMBL:AP002034
EMBL:AP000410 KO:K11836 eggNOG:COG5207 HOGENOM:HOG000162311
EMBL:AF302664 EMBL:AY140096 EMBL:AK226894 IPI:IPI00525815
RefSeq:NP_566666.2 UniGene:At.16942 PDB:1VEK PDB:1WIV PDBsum:1VEK
PDBsum:1WIV ProteinModelPortal:Q8L6Y1 SMR:Q8L6Y1 STRING:Q8L6Y1
MEROPS:C19.084 PaxDb:Q8L6Y1 PRIDE:Q8L6Y1 DNASU:821610
EnsemblPlants:AT3G20630.1 GeneID:821610 KEGG:ath:AT3G20630
TAIR:At3g20630 InParanoid:Q8L6Y1 OMA:DDMVEDP PhylomeDB:Q8L6Y1
ProtClustDB:CLSN2690557 EvolutionaryTrace:Q8L6Y1
Genevestigator:Q8L6Y1 Uniprot:Q8L6Y1
Length = 797
Score = 2753 (974.2 bits), Expect = 1.4e-286, P = 1.4e-286
Identities = 522/758 (68%), Positives = 613/758 (80%)
Query: 4 MDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKT 63
M+LLRSNLSRV+IPEPT+RI+K ECC+SFDTPRSEGGLFVD+NSFLA+GKD+V WN+EKT
Sbjct: 1 MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60
Query: 64 GNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSY 123
GNPVYLHIKQTRK + PEDRP KKPTLLAIGV+GGFDNNE EY+E++SIVILP++V+L +
Sbjct: 61 GNPVYLHIKQTRKSI-PEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPF 119
Query: 124 PSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWK 183
PSVELPEKVR+AVD ++ A GAERKEQVAAWTA+KK S +A+ LQQI +G++IPPSGWK
Sbjct: 120 PSVELPEKVRIAVDTVVNAVGAERKEQVAAWTAEKKLISEHALTLQQIKSGIVIPPSGWK 179
Query: 184 CAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGA 243
C+KCDK +NLWLNLTDGMILCGR+NWDGTGGNNHAVEHYKET YPLAVKLGTIT+DLE A
Sbjct: 180 CSKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTITADLEAA 239
Query: 244 DVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDV 303
DV+SYPEDDSV+DPLLA+HLA FGIDFSS+QKTEMTTAERELDQNTNFDWNRIQESG+++
Sbjct: 240 DVYSYPEDDSVLDPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKEL 299
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNM 363
P+FGPGYTGLVNLGNSCYLAATMQ++FSTH+F +RY++ + LK AFE APADPT+DLNM
Sbjct: 300 VPVFGPGYTGLVNLGNSCYLAATMQIVFSTHSFISRYFSHQSLKMAFEMAPADPTLDLNM 359
Query: 364 QLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQ 423
QLTKL HGLLSGKYS+PA +K +QEGIPPRMFK VIAASH EFSSMRQQ
Sbjct: 360 QLTKLGHGLLSGKYSMPATQKDATTGDP-----RQEGIPPRMFKNVIAASHAEFSSMRQQ 414
Query: 424 DALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIPL 483
DAL+FFLH V +VER + P++DP++SFKFGIEE+I CPSGKV YN+R D ILSL IPL
Sbjct: 415 DALDFFLHLVGKVERASNTTPDLDPSRSFKFGIEEKILCPSGKVGYNKREDCILSLNIPL 474
Query: 484 DEATNKEELAAFQKLKMERISEGKDV-TNEEIVRPRVPLEACLSTFSAPEELPDFYXXXX 542
EATNK+EL AF K K + E D+ +++EIVRPRVPLEACL+ F++ E + D+Y
Sbjct: 475 HEATNKDELEAFHKQKAGKGLEENDMRSSDEIVRPRVPLEACLANFASSEPIEDYYSSAL 534
Query: 543 XXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMRSKXXXXX 602
FPDYLVLHMRKFVME GWVPKKL SHMRSK
Sbjct: 535 KGMTTAIKTTGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSKGLQPG 594
Query: 603 XXXXXXXXXXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSH 662
+ ++S +PVAN++IV+QLVSMGF+ LHC+KAA+NTSNAGVEEAMNWLLSH
Sbjct: 595 EELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSH 654
Query: 663 MDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNPX 722
MDDPDID P+S +T + IDQS V+TLLSFGF+E+VAR ALKASGGDIEKATDW+FNNP
Sbjct: 655 MDDPDIDAPISHQT--SDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNPN 712
Query: 723 XXXXXXXXXXXXXXXQTPADAGLPDGGGSKFLKHILAY 760
QTPA +GLPDGGG L I+++
Sbjct: 713 ASVSDMDVSSSNSA-QTPAQSGLPDGGGKYKLFGIVSH 749
>RGD|1308438 [details] [associations]
symbol:Usp5 "ubiquitin specific peptidase 5 (isopeptidase T)"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA;ISO] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 RGD:1308438 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0032436 GO:GO:0071108 SUPFAM:SSF46934 GO:GO:0008242
GO:GO:0004221 EMBL:CH473964 GeneTree:ENSGT00390000000874 KO:K11836
OMA:DDMVEDP CTD:8078 OrthoDB:EOG4229J2 IPI:IPI00207657
RefSeq:NP_001100089.1 UniGene:Rn.44078 Ensembl:ENSRNOT00000020785
GeneID:297593 KEGG:rno:297593 UCSC:RGD:1308438 NextBio:642447
Uniprot:D3ZVQ0
Length = 858
Score = 1476 (524.6 bits), Expect = 9.8e-172, Sum P(2) = 9.8e-172
Identities = 297/590 (50%), Positives = 391/590 (66%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F KTG
Sbjct: 7 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Query: 65 NPVYLHIKQTRKLVAPE------DRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVILP 116
VYLH+++TR+ + D P KKPT LAIGVEGGFD E EYDE IVILP
Sbjct: 67 QRVYLHLRRTRRPKEEDSSAGTGDPPRKKPTRLAIGVEGGFDLTEDKFEYDEDVKIVILP 126
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A NL+Q+
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFNLKQL 186
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GW+C+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEHY+ETGYPLAV
Sbjct: 187 DNPARIPPCGWRCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAV 246
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 247 KLGTITPD--GADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 304
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 305 GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 362
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS PA E Q+GI PRMFKA+I
Sbjct: 363 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPALESGDGEQVPEQKEV-QDGIAPRMFKALI 421
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 422 GKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 479
Query: 470 NRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFS 529
+R+DYI+ L +P+D A NKEEL +++ K R +E + V E+VR +VP +CL +
Sbjct: 480 TQRVDYIMQLPVPMDAALNKEELLEYEEKK--RQAEEEKVALPELVRAQVPFSSCLEAYG 537
Query: 530 APEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 538 APEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKL 587
Score = 215 (80.7 bits), Expect = 9.8e-172, Sum P(2) = 9.8e-172
Identities = 47/110 (42%), Positives = 65/110 (59%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL------S 673
P+ ++ +V QLV MGF C KA T N+G E AMNW++SHMDDPD PL
Sbjct: 653 PMLDESVVIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSG 712
Query: 674 QETQCAAID---QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ AA D + V T++S GFS + A AL+A+ +E+A DWIF++
Sbjct: 713 PGSTSAAADPPPEDCVATIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
Score = 96 (38.9 bits), Expect = 3.7e-159, Sum P(2) = 3.7e-159
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 624 KDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID--MPLSQETQCA-A 680
+D V+ +VSMGF+ KA T+N+ +E A++W+ SH+DD D + M +S+ A +
Sbjct: 725 EDCVATIVSMGFSRDQALKALRATNNS-LERAVDWIFSHIDDLDAEAAMDISEGRSAADS 783
Query: 681 IDQS 684
I +S
Sbjct: 784 ISES 787
>MGI|MGI:1347343 [details] [associations]
symbol:Usp5 "ubiquitin specific peptidase 5 (isopeptidase
T)" species:10090 "Mus musculus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISO] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 MGI:MGI:1347343
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0032436 GO:GO:0071108 SUPFAM:SSF46934
EMBL:AC002397 GO:GO:0008242 GO:GO:0004221
GeneTree:ENSGT00390000000874 KO:K11836 eggNOG:COG5207
HOGENOM:HOG000162311 HOVERGEN:HBG002833 OMA:DDMVEDP MEROPS:C19.001
CTD:8078 ChiTaRS:USP5 EMBL:BC066993 IPI:IPI00113214
RefSeq:NP_038728.1 UniGene:Mm.3571 ProteinModelPortal:P56399
SMR:P56399 MINT:MINT-220667 STRING:P56399 PhosphoSite:P56399
PaxDb:P56399 PRIDE:P56399 Ensembl:ENSMUST00000047510 GeneID:22225
KEGG:mmu:22225 UCSC:uc009dsa.1 InParanoid:P56399 NextBio:302251
Bgee:P56399 CleanEx:MM_USP5 Genevestigator:P56399
GermOnline:ENSMUSG00000038429 Uniprot:P56399
Length = 858
Score = 1474 (523.9 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 297/590 (50%), Positives = 391/590 (66%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F KTG
Sbjct: 7 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Query: 65 NPVYLHIKQTRKLVAPE------DRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVILP 116
VYLH+++TR+ + D P KKPT LAIGVEGGFD E E+DE IVILP
Sbjct: 67 QRVYLHLRRTRRPKEEDTSAGTGDPPRKKPTRLAIGVEGGFDLTEDKFEFDEDVKIVILP 126
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A NL+Q+
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFNLKQL 186
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEHY+ETGYPLAV
Sbjct: 187 DNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAV 246
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 247 KLGTITPD--GADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 304
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 305 GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 362
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS PA E Q+GI PRMFKA+I
Sbjct: 363 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPALESGDGEQVPEQKEV-QDGIAPRMFKALI 421
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 422 GKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 479
Query: 470 NRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFS 529
+R+DYI+ L +P+D A NKEEL +++ K R +E + V E+VR +VP +CL +
Sbjct: 480 TQRVDYIMQLPVPMDAALNKEELLEYEEKK--RQAEEEKVPLPELVRAQVPFSSCLEAYG 537
Query: 530 APEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 538 APEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKL 587
Score = 214 (80.4 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL------S 673
P+ ++ ++ QLV MGF C KA T N+G E AMNW++SHMDDPD PL
Sbjct: 653 PMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSG 712
Query: 674 QETQCAAID---QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ AA D + V T++S GFS + A AL+A+ +E+A DWIF++
Sbjct: 713 PGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
Score = 96 (38.9 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 624 KDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID--MPLSQETQCA-A 680
+D V+ +VSMGF+ KA T+N+ +E A++W+ SH+DD D + M +S+ A +
Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNS-LERAVDWIFSHIDDLDAEAAMDISEGRSAAES 783
Query: 681 IDQS 684
I +S
Sbjct: 784 ISES 787
>UNIPROTKB|F1N3P2 [details] [associations]
symbol:USP5 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0032436 GO:GO:0071108
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
GeneTree:ENSGT00390000000874 OMA:DDMVEDP EMBL:DAAA02014455
IPI:IPI01000235 UniGene:Bt.7631 Ensembl:ENSBTAT00000026356
NextBio:20867059 Uniprot:F1N3P2
Length = 858
Score = 1466 (521.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 295/590 (50%), Positives = 390/590 (66%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F KTG
Sbjct: 7 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Query: 65 NPVYLHIKQTRKLVAPE------DRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVILP 116
VYLH+++TR+ + D P KKPT LAIGVEGGFD NE EYDE IVILP
Sbjct: 67 QRVYLHLRRTRRPKEEDATSGTGDPPRKKPTRLAIGVEGGFDLNEEKFEYDEDVKIVILP 126
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A NL+Q+
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFNLKQL 186
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEH++ETGYPLAV
Sbjct: 187 DNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHFRETGYPLAV 246
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 247 KLGTITPD--GADVYSYDEDDMVLDPNLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 304
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQES ++PL GPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 305 GEWELIQESAVPLKPLSGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 362
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS PA E Q+GI PRMFKA+I
Sbjct: 363 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQVTEQKEV-QDGIAPRMFKALI 421
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 422 GKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 479
Query: 470 NRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFS 529
+R+DYI+ L +P+D A NKEEL +++ K R +E + + E+VR +VP +CL +
Sbjct: 480 TQRVDYIMQLPVPMDAALNKEELLEYEEKK--RQAEEEKLPLPELVRAQVPFSSCLEAYG 537
Query: 530 APEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 538 APEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKL 587
Score = 214 (80.4 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL------S 673
P+ ++ ++ QLV MGF C KA T N+G E AMNW++SHMDDPD PL
Sbjct: 653 PMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSG 712
Query: 674 QETQCAAID---QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ AA D + V T++S GFS + A AL+A+ +E+A DWIF++
Sbjct: 713 PGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
Score = 96 (38.9 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 624 KDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID--MPLSQETQCA-A 680
+D V+ +VSMGF+ KA T+N+ +E A++W+ SH+DD D + M +S+ A +
Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNS-LERAVDWIFSHIDDLDAEAAMDISEGRSAADS 783
Query: 681 IDQS 684
I +S
Sbjct: 784 ISES 787
>UNIPROTKB|F1P9P5 [details] [associations]
symbol:USP5 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 SUPFAM:SSF46934
GO:GO:0008242 GO:GO:0004221 GeneTree:ENSGT00390000000874
OMA:DDMVEDP EMBL:AAEX03015272 Ensembl:ENSCAFT00000023250
Uniprot:F1P9P5
Length = 868
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 346/744 (46%), Positives = 463/744 (62%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F KTG
Sbjct: 40 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 99
Query: 65 NPVYLHIKQTRK------LVAPEDRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVILP 116
VYLH+++TR+ D P KKPT LAIG+EGGFD +E EYDE IVILP
Sbjct: 100 QRVYLHLRRTRRPKEEDTTTGTGDPPRKKPTRLAIGMEGGFDLSEEKFEYDEDVKIVILP 159
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A NL+Q+
Sbjct: 160 DYLEIARDGLGGLPDLVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFNLKQL 219
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEHY+ETGYPLAV
Sbjct: 220 DNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAV 279
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 280 KLGTITPD--GADVYSYDEDDMVLDPNLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 337
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 338 GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 395
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS PA E Q+GI PRMFKA+I
Sbjct: 396 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQVPEQKEV-QDGIAPRMFKALI 454
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 455 GKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 512
Query: 470 NRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFS 529
+R+DYI+ L +P+D A NKEEL +++ K R +E + + E+VR +VP +CL +
Sbjct: 513 TQRVDYIMQLPVPMDAALNKEELLEYEEKK--RQAEEEKLPLPELVRAQVPFSSCLEAYG 570
Query: 530 APEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXX 589
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 571 APEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEEL 630
Query: 590 XXSHMRSKXXXXXXXXXXXXX----XXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAV 645
S +R DE ++ P+ ++ ++ QLV MGF C KA
Sbjct: 631 DISQLRGTGLQPGEEELPDIAPPLVTPDEPKA--PMLDESVIIQLVEMGFPMDACRKAVY 688
Query: 646 NTSNAGVEEAMNWLLSHMDDPDIDMPL------SQETQCAAID---QSKVETLLSFGFSE 696
T N+G E AMNW++SHMDDPD PL + AA D + V T++S GFS
Sbjct: 689 YTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVSTIVSMGFSR 748
Query: 697 EVARNALKASGGDIEKATDWIFNN 720
+ A AL+A+ +E+A DWIF++
Sbjct: 749 DQALKALRATNNSLERAVDWIFSH 772
>UNIPROTKB|P45974 [details] [associations]
symbol:USP5 "Ubiquitin carboxyl-terminal hydrolase 5"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IMP]
[GO:0005764 "lysosome" evidence=TAS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 GO:GO:0046872 GO:GO:0008270
GO:GO:0005764 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471116 GO:GO:0006511
GO:GO:0032436 GO:GO:0071108 SUPFAM:SSF46934 GO:GO:0004197
EMBL:U47924 GO:GO:0008242 GO:GO:0004221 PDB:2G45 PDB:3IHP
PDBsum:2G45 PDBsum:3IHP KO:K11836 eggNOG:COG5207
HOGENOM:HOG000162311 HOVERGEN:HBG002833 OMA:DDMVEDP EMBL:X91349
EMBL:U47927 EMBL:U35116 EMBL:BC004889 EMBL:BC005139 IPI:IPI00024664
IPI:IPI00375145 PIR:S68227 RefSeq:NP_001092006.1 RefSeq:NP_003472.2
UniGene:Hs.631661 PDB:2DAG PDB:2DAK PDB:2G43 PDBsum:2DAG
PDBsum:2DAK PDBsum:2G43 ProteinModelPortal:P45974 SMR:P45974
IntAct:P45974 MINT:MINT-5001006 STRING:P45974 MEROPS:C19.001
PhosphoSite:P45974 DMDM:1717869 REPRODUCTION-2DPAGE:IPI00375145
PaxDb:P45974 PRIDE:P45974 DNASU:8078 Ensembl:ENST00000229268
Ensembl:ENST00000389231 GeneID:8078 KEGG:hsa:8078 UCSC:uc001qrh.4
UCSC:uc001qri.4 CTD:8078 GeneCards:GC12P007024 HGNC:HGNC:12628
HPA:HPA006756 MIM:601447 neXtProt:NX_P45974 PharmGKB:PA37253
InParanoid:P45974 OrthoDB:EOG4229J2 PhylomeDB:P45974
ChEMBL:CHEMBL6158 ChiTaRS:USP5 EvolutionaryTrace:P45974
GenomeRNAi:8078 NextBio:30687 PMAP-CutDB:P45974 ArrayExpress:P45974
Bgee:P45974 CleanEx:HS_USP5 Genevestigator:P45974
GermOnline:ENSG00000111667 Uniprot:P45974
Length = 858
Score = 1463 (520.1 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 293/590 (49%), Positives = 390/590 (66%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL +GK +V +F KTG
Sbjct: 7 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Query: 65 NPVYLHIKQTRK------LVAPEDRPSKKPTLLAIGVEGGFDNNEAEY--DETHSIVILP 116
VYLH+++TR+ D P KKPT LAIGVEGGFD +E ++ DE IVILP
Sbjct: 67 QRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVILP 126
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A +L+Q+
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFSLKQL 186
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEHY+ETGYPLAV
Sbjct: 187 DNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAV 246
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 247 KLGTITPD--GADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 304
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 305 GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 362
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS P E Q+GI PRMFKA+I
Sbjct: 363 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERVPEQKEV-QDGIAPRMFKALI 421
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 422 GKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 479
Query: 470 NRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFS 529
+R+DYI+ L +P+D A NKEEL +++ K R +E + + E+VR +VP +CL +
Sbjct: 480 TQRVDYIMQLPVPMDAALNKEELLEYEEKK--RQAEEEKMALPELVRAQVPFSSCLEAYG 537
Query: 530 APEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 538 APEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKL 587
Score = 214 (80.4 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL------S 673
P+ ++ ++ QLV MGF C KA T N+G E AMNW++SHMDDPD PL
Sbjct: 653 PMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSG 712
Query: 674 QETQCAAID---QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ AA D + V T++S GFS + A AL+A+ +E+A DWIF++
Sbjct: 713 PGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
Score = 96 (38.9 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 624 KDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID--MPLSQETQCA-A 680
+D V+ +VSMGF+ KA T+N+ +E A++W+ SH+DD D + M +S+ A +
Sbjct: 725 EDCVTTIVSMGFSRDQALKALRATNNS-LERAVDWIFSHIDDLDAEAAMDISEGRSAADS 783
Query: 681 IDQS 684
I +S
Sbjct: 784 ISES 787
>UNIPROTKB|F1SLU6 [details] [associations]
symbol:USP5 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0032436 GO:GO:0071108
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
GeneTree:ENSGT00390000000874 OMA:DDMVEDP EMBL:FP325257
Ensembl:ENSSSCT00000000745 Uniprot:F1SLU6
Length = 859
Score = 1459 (518.7 bits), Expect = 7.8e-170, Sum P(2) = 7.8e-170
Identities = 294/591 (49%), Positives = 391/591 (66%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP SEGGL++ +N+FL + K +V +F KTG
Sbjct: 7 EALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFSKQYVERHFNKTG 66
Query: 65 NPVYLHIKQTRK------LVAPEDRPSKKPTLLAIGVEGGFDNNEA--EYDETHSIVILP 116
VYLH+++TR+ D P KKPT LAIG+EGGFD +E +YDE IVILP
Sbjct: 67 QRVYLHLRRTRRPKEEDTTAGTGDPPRKKPTRLAIGIEGGFDLSEKKFDYDEDVKIVILP 126
Query: 117 EYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQI 171
+Y+ ++ + LP+ VR AV+A+L A+ A RK++V AW + +Q S +A NL+Q+
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSRHAFNLKQL 186
Query: 172 DNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV 231
DN IPP GWKC+KCD R+NLWLNLTDG ILCGRR +DG+GGNNHAVEH+KETGYPLAV
Sbjct: 187 DNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHFKETGYPLAV 246
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTIT D GADV+SY EDD V+DP LA+HL+ FGID +QKT+ T E E+D N
Sbjct: 247 KLGTITPD--GADVYSYDEDDMVLDPNLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRI 304
Query: 292 -DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAF 350
+W IQESG ++PLFGPGYTG+ NLGNSCYL + +QV+FS F +Y + L+ F
Sbjct: 305 GEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYV--DKLEKIF 362
Query: 351 EAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
+ AP DPT D + Q+ KL HGLLSG+YS PA E Q+GI PRMFKA+I
Sbjct: 363 QNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQVPEQKEV-QDGIAPRMFKALI 421
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAY 469
+ HPEFS+ RQQDA EFFLH ++ VER + + +P + F+F +EE+I C + KV Y
Sbjct: 422 SKGHPEFSTNRQQDAQEFFLHLINMVER--NCRSSENPNEVFRFLVEEKIKCLATEKVKY 479
Query: 470 NRRLDYILSLGIPLDEATNK-EELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTF 528
+R+DYI+ L +P+D A NK EEL +++ K R +E + + E+VR +VP +CL +
Sbjct: 480 TQRVDYIMQLPVPMDAALNKAEELLEYEEKK--RQAEEEKLPLPELVRAQVPFSSCLEAY 537
Query: 529 SAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 538 GAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKL 588
Score = 214 (80.4 bits), Expect = 7.8e-170, Sum P(2) = 7.8e-170
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL------S 673
P+ ++ ++ QLV MGF C KA T N+G E AMNW++SHMDDPD PL
Sbjct: 654 PMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSG 713
Query: 674 QETQCAAID---QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ AA D + V T++S GFS + A AL+A+ +E+A DWIF++
Sbjct: 714 PGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 763
Score = 96 (38.9 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 624 KDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID--MPLSQETQCA-A 680
+D V+ +VSMGF+ KA T+N+ +E A++W+ SH+DD D + M +S+ A +
Sbjct: 726 EDCVTTIVSMGFSRDQALKALRATNNS-LERAVDWIFSHIDDLDAEAAMDISEGRSAADS 784
Query: 681 IDQS 684
I +S
Sbjct: 785 ISES 788
>UNIPROTKB|E1C8W4 [details] [associations]
symbol:USP5 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0032436 GO:GO:0071108
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
GeneTree:ENSGT00390000000874 OMA:DDMVEDP EMBL:AADN02061118
EMBL:AADN02061119 IPI:IPI00579016 Ensembl:ENSGALT00000023441
Uniprot:E1C8W4
Length = 833
Score = 1638 (581.7 bits), Expect = 2.0e-168, P = 2.0e-168
Identities = 342/745 (45%), Positives = 463/745 (62%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+ L S L +R+P+ +R+ K EC SFDTP S+GGL++ +N+FL +GK +V +++KTG
Sbjct: 6 EALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVEKHYQKTG 65
Query: 65 NPVYLHIKQTRKLVAPE------DRPSKKPTLLAI-GVEGGFDNNEA--EYDETHSIVIL 115
VYLH+K+TRK + D P KKPT LAI GVEGGFD E EYDE IVI
Sbjct: 66 QRVYLHLKRTRKPKEEDANSSAGDPPRKKPTRLAIVGVEGGFDITEEKFEYDEDVKIVIF 125
Query: 116 PEYVTLSYPSVE-LPEKVR----LAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQ 170
PE++ + +E LP+ VR AV+AIL A+ A RK++V AW + ++ S +A +L Q
Sbjct: 126 PEHLDIPRDGLEGLPDMVRDRIASAVEAILTADSASRKQEVQAWDGEVRRVSKHAFSLHQ 185
Query: 171 IDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLA 230
+ N V IPP GWKC+KCD R+NLWLN+TDG ILCGRR +DG+GGNNHAVEHY+ETGYPLA
Sbjct: 186 LQNDVRIPPCGWKCSKCDMRENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETGYPLA 245
Query: 231 VKLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTN 290
VKLGTIT D GADV+SY EDD V+DP LA+HLA FGID +QKT+ T E E+D N
Sbjct: 246 VKLGTITPD--GADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMNQR 303
Query: 291 F-DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAA 349
+W IQESG ++PL+GPGYTG+ NLGNSCYL + MQV+FS F +Y + L+
Sbjct: 304 IGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYV--DKLEKI 361
Query: 350 FEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAV 409
F++AP+DPT D + Q+ KL HGLLSG+YS PA + Q GI PRMFKA+
Sbjct: 362 FQSAPSDPTQDFSTQVAKLGHGLLSGEYSKPASAEGEQQPDQKGV---QNGIAPRMFKAL 418
Query: 410 IAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVA 468
I HPEFS+ RQQDA EFFLHF++ VER + + +P + F+F +EE++ C + KV
Sbjct: 419 IGKGHPEFSTNRQQDAQEFFLHFINMVER--NCRSSENPNEVFRFLVEEKLKCLATEKVK 476
Query: 469 YNRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTF 528
Y +R+DYI+ L +P+D A NK+EL +++ K + E + + E+VR +VP +CL +
Sbjct: 477 YTQRVDYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLP--ELVRAKVPFSSCLEAY 534
Query: 529 SAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXX 588
APE++ DF+ FPDYLV+ ++KF WVPKKL
Sbjct: 535 GAPEQVDDFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEE 594
Query: 589 XXXSHMRSKXXXXXXXXXXXXX----XXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAA 644
S ++ DE ++ P+ ++ ++ QLV MGF C KA
Sbjct: 595 LDISALQGTGLQDGEEEMPDIAPPLVTPDEPKA--PMLDESVIIQLVEMGFPMDACRKAV 652
Query: 645 VNTSNAGVEEAMNWLLSHMDDPDIDMPL------SQETQCAAID---QSKVETLLSFGFS 695
T N+GVE AMNW++SHMDDPD PL + A D + V T++S GFS
Sbjct: 653 YYTGNSGVEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPPSEDSVATIVSMGFS 712
Query: 696 EEVARNALKASGGDIEKATDWIFNN 720
+ A AL+A+ +E+A DWIF++
Sbjct: 713 RDQAMKALRATNNSLERAVDWIFSH 737
>UNIPROTKB|E1BMF7 [details] [associations]
symbol:USP13 "Ubiquitin carboxyl-terminal hydrolase 13"
species:9913 "Bos taurus" [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0050821 "protein stabilization" evidence=ISS]
[GO:0010506 "regulation of autophagy" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0050821 GO:GO:0006355 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0006914 GO:GO:0010506
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0070536 GO:GO:0043130
SUPFAM:SSF46934 GO:GO:0004197 GO:GO:0008242 GO:GO:0004843
GO:GO:0004221 EMBL:DAAA02001954 EMBL:DAAA02001955 EMBL:DAAA02001956
EMBL:DAAA02001957 EMBL:DAAA02001958 IPI:IPI00704433
RefSeq:NP_001178195.1 UniGene:Bt.74584 Ensembl:ENSBTAT00000061390
GeneID:100141289 KEGG:bta:100141289 CTD:8975
GeneTree:ENSGT00390000000874 KO:K11836 OMA:PQQNGIS NextBio:20791338
Uniprot:E1BMF7
Length = 863
Score = 1384 (492.3 bits), Expect = 1.5e-155, Sum P(2) = 1.5e-155
Identities = 288/691 (41%), Positives = 412/691 (59%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 26 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 85
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + + ++++ EY++ +VI P
Sbjct: 86 QSVYMHLKRHVREKVRGASGGALPKRRNSKM--FLDLDTDDDLNSDDYEYEDEAKLVIFP 143
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 144 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NELPVSKYANNLTQLDNGV 202
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++TGYPLAVKLGT
Sbjct: 203 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDTGYPLAVKLGT 262
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E+++V+DP LA+HLA FGID + TE + ++ + +W
Sbjct: 263 ITPD--GADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHGTENGLQDNDIKPRVS-EWEV 319
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQE+G ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 320 IQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 377
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
DPT D N Q+TKL HGLLSG+YS P + + +Q GI PRMFKA ++ SH
Sbjct: 378 DPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSH 437
Query: 415 PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473
PEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C + KV Y R+
Sbjct: 438 PEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQTRKVRYTERV 495
Query: 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEE 533
DY++ L + ++ ATNK+EL A++ + E S + + E+VR ++P ACL FS PE
Sbjct: 496 DYLMQLPVAMEAATNKDELIAYELTRREAESNRRPLP--ELVRAKIPFSACLQAFSEPEN 553
Query: 534 LPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSH 593
+ DF+ FP+YLV+ ++KF WVPKK +H
Sbjct: 554 VDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSVDMPDLLDINH 613
Query: 594 MRSKXXXXXXXXXXXXX----XXDEVQSN---KPVANKDI----VSQLVSMGFNHLHCEK 642
+R++ D+ + + + DI V QL MGF C K
Sbjct: 614 LRARGLQPGEEELPDISPPIVIPDDSKDRLMTQLIDPSDIDESSVMQLAEMGFPLEACRK 673
Query: 643 AAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
A T N G E A NW++ HM++PD PL+
Sbjct: 674 AVYFTGNMGAEVAFNWIVVHMEEPDFAEPLT 704
Score = 154 (59.3 bits), Expect = 1.5e-155, Sum P(2) = 1.5e-155
Identities = 41/111 (36%), Positives = 55/111 (49%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAA------ 680
V QL MGF C KA T N G E A NW++ HM++PD PL+ A
Sbjct: 658 VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIVVHMEEPDFAEPLTMPGYGGAASAGAS 717
Query: 681 ------ID-QSKVET---LLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+D Q ET + S GF A AL+A+ ++E+A DWIF++P
Sbjct: 718 VFGATGLDNQPPEETVAIITSMGFHRNQAIQALRATNSNLERALDWIFSHP 768
Score = 60 (26.2 bits), Expect = 1.3e-145, Sum P(2) = 1.3e-145
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 665 DPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWI 717
D D ++Q + ID+S V L GF E R A+ +G E A +WI
Sbjct: 637 DDSKDRLMTQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWI 690
>UNIPROTKB|Q92995 [details] [associations]
symbol:USP13 "Ubiquitin carboxyl-terminal hydrolase 13"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0043130
"ubiquitin binding" evidence=IDA] [GO:0050821 "protein
stabilization" evidence=IDA] [GO:0030318 "melanocyte
differentiation" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IDA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
[GO:0010506 "regulation of autophagy" evidence=IDA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0050821 GO:GO:0006355 GO:GO:0046872
GO:GO:0008283 EMBL:CH471052 GO:GO:0008270 GO:GO:0006914
GO:GO:0010506 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0070536
GO:GO:0030318 GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0004197
GO:GO:0008242 GO:GO:0004843 GO:GO:0004221 EMBL:AC007687 CTD:8975
KO:K11836 OMA:PQQNGIS EMBL:U75362 EMBL:AK290338 EMBL:AK302404
EMBL:AC125604 EMBL:BC016146 IPI:IPI00024401 IPI:IPI00947195
RefSeq:NP_003931.2 UniGene:Hs.175322 PDB:2L80 PDB:2LBC PDBsum:2L80
PDBsum:2LBC ProteinModelPortal:Q92995 SMR:Q92995 IntAct:Q92995
MINT:MINT-1195142 STRING:Q92995 MEROPS:C19.012 PhosphoSite:Q92995
DMDM:209572692 PaxDb:Q92995 PRIDE:Q92995 DNASU:8975
Ensembl:ENST00000263966 Ensembl:ENST00000496897 GeneID:8975
KEGG:hsa:8975 UCSC:uc003fkh.3 GeneCards:GC03P179370
H-InvDB:HIX0003883 HGNC:HGNC:12611 HPA:HPA004827 MIM:603591
neXtProt:NX_Q92995 PharmGKB:PA37237 eggNOG:COG5207
HOGENOM:HOG000162311 HOVERGEN:HBG002833 InParanoid:Q92995
OrthoDB:EOG46DM24 PhylomeDB:Q92995 GenomeRNAi:8975 NextBio:33685
ArrayExpress:Q92995 Bgee:Q92995 CleanEx:HS_USP13
Genevestigator:Q92995 GermOnline:ENSG00000058056 Uniprot:Q92995
Length = 863
Score = 1382 (491.5 bits), Expect = 1.9e-155, Sum P(2) = 1.9e-155
Identities = 288/691 (41%), Positives = 411/691 (59%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 26 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 85
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + + ++++ EY++ +VI P
Sbjct: 86 QSVYMHLKRHVREKVRGASGGALPKRRNSK--IFLDLDTDDDLNSDDYEYEDEAKLVIFP 143
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 144 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NELPVSKYANNLTQLDNGV 202
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++ GYPLAVKLGT
Sbjct: 203 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGT 262
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E++ V+DP LA+HLA FGID + TE + ++ + +W
Sbjct: 263 ITPD--GADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHGTENGLQDNDIKLRVS-EWEV 319
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQESG ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 320 IQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 377
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
DPT D N Q+TKL HGLLSG+YS P + + +Q GI PRMFKA ++ SH
Sbjct: 378 DPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSH 437
Query: 415 PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473
PEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C + KV Y R+
Sbjct: 438 PEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQTRKVRYTERV 495
Query: 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEE 533
DY++ L + ++ ATNK+EL A++ + E + + + E+VR ++P ACL FS PE
Sbjct: 496 DYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLP--ELVRAKIPFSACLQAFSEPEN 553
Query: 534 LPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSH 593
+ DF+ FP+YLV+ ++KF WVPKK +H
Sbjct: 554 VDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSIDMPDLLDINH 613
Query: 594 MRSKXXXXXXXXXXXXX----XXDEVQS---NKPVANKDI----VSQLVSMGFNHLHCEK 642
+R++ D+ + N+ + DI V QL MGF C K
Sbjct: 614 LRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRK 673
Query: 643 AAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
A T N G E A NW++ HM++PD PL+
Sbjct: 674 AVYFTGNMGAEVAFNWIIVHMEEPDFAEPLT 704
Score = 155 (59.6 bits), Expect = 1.9e-155, Sum P(2) = 1.9e-155
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAA------ 680
V QL MGF C KA T N G E A NW++ HM++PD PL+ A
Sbjct: 658 VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGAS 717
Query: 681 ------IDQSKVETLL----SFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+D E ++ S GF A AL+A+ ++E+A DWIF++P
Sbjct: 718 VFGASGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERALDWIFSHP 768
Score = 80 (33.2 bits), Expect = 1.6e-147, Sum P(2) = 1.6e-147
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMD-DPDIDMPLSQET 676
N+P ++IV+ + SMGF +A T+N +E A++W+ SH + + D D + E
Sbjct: 726 NQPP--EEIVAIITSMGFQRNQAIQALRATNN-NLERALDWIFSHPEFEEDSDFVIEMEN 782
Query: 677 QCAA--IDQSKVE 687
A I ++K E
Sbjct: 783 NANANIISEAKPE 795
Score = 60 (26.2 bits), Expect = 2.0e-145, Sum P(2) = 2.0e-145
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 665 DPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWI 717
D D ++Q + ID+S V L GF E R A+ +G E A +WI
Sbjct: 637 DDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWI 690
>ZFIN|ZDB-GENE-040426-2584 [details] [associations]
symbol:usp5 "ubiquitin specific protease 5"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008242 "omega peptidase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0010506
"regulation of autophagy" evidence=ISS] [GO:0043130 "ubiquitin
binding" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0050821 "protein stabilization" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
ZFIN:ZDB-GENE-040426-2584 GO:GO:0050821 GO:GO:0006355 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0006914 GO:GO:0010506
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0009953 GO:GO:0070536
GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0004197 GO:GO:0008242
GO:GO:0004843 GO:GO:0004221 CTD:8975 GeneTree:ENSGT00390000000874
KO:K11836 OMA:PQQNGIS EMBL:AL928701 EMBL:CU459215 EMBL:BC141800
IPI:IPI00636029 RefSeq:NP_001091856.1 UniGene:Dr.115281
Ensembl:ENSDART00000065293 GeneID:558011 KEGG:dre:558011
NextBio:20882266 ArrayExpress:F1QFS9 Bgee:F1QFS9 Uniprot:F1QFS9
Length = 860
Score = 1362 (484.5 bits), Expect = 3.0e-155, Sum P(2) = 3.0e-155
Identities = 282/695 (40%), Positives = 409/695 (58%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL + +R+P +R+FK EC S+D+P SEGGL+V +NSFL +G++HV ++ KTG
Sbjct: 7 ELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNSFLGFGREHVERHYRKTG 66
Query: 65 NPVYLHIKQTRKLVA--------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ K A P R K L + + F+ ++ EY++ +VI P
Sbjct: 67 QSVYMHLKRHVKEKATGAAGGAIPRRRNGK--VFLDLELNRDFNGDDYEYEDEAKLVIFP 124
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ + P++E LP V +A DA+L A +K++ +W ++ Q S +A +L+Q+DNGV
Sbjct: 125 DHYEIPLPNIEELPALVTIACDAVLNAPSPYKKQESDSWE-EEIQVSRHARSLRQLDNGV 183
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCAKC+ R+NLWLNLTDG +LCG+ +DG+GGN HA+EHY+E+ +PLAVKL T
Sbjct: 184 RIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRESNFPLAVKLNT 243
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GAD++S+ E+++V+DP +++HL FGID +Q+TE Q DW
Sbjct: 244 ITPD--GADIYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRISDWEV 301
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQE+G ++P++G GYTG+ NLGNSCYL+ TMQV+FS F R Y L+ F+ +P
Sbjct: 302 IQEAGLKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEF-QRAYAGN-LQRIFDYSPL 359
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQE--GIPPRMFKAVIAAS 413
DPT D N Q+ KL HGLLSG+YS P + +Q+ GI P+MFKA+++
Sbjct: 360 DPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKQQQQRGISPKMFKALVSKG 419
Query: 414 HPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRR 472
HPEFSS RQQDA EF LH ++ VER +SG +P+ F+F +EER C S KV Y +R
Sbjct: 420 HPEFSSNRQQDAHEFLLHLINLVERNNSGSE--NPSDVFRFIVEERTQCCQSQKVRYTQR 477
Query: 473 LDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPE 532
+DY++ L +PL+ A+N+EEL A++ + E + + E+VR RVP ACL F+ PE
Sbjct: 478 VDYLMQLPVPLEAASNREELIAYEGKRKEAEENMRPLP--EVVRARVPFTACLQAFTEPE 535
Query: 533 ELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXS 592
+PDF+ FP+Y+++ ++KF WVPKKL +
Sbjct: 536 NVPDFWSSALQAKSAGVKTSRFATFPEYMIVQLKKFTFGVDWVPKKLDMSVDVPDFLDLN 595
Query: 593 HMRSKXXXXXXXXXXXXX--------XXDEVQSNK---PVANKDIVSQLVSMGFNHLHCE 641
+R+ D +N P ++ V QL MGF C
Sbjct: 596 RLRATGLQAGEEELPDLTPPIVIPEDTRDSSTNNSLESPEIDESSVMQLAEMGFPLEACR 655
Query: 642 KAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQET 676
KA T N G E A NW+++HM++PD PL+ T
Sbjct: 656 KAVYYTGNMGAEMAFNWIIAHMEEPDFAEPLAVPT 690
Score = 173 (66.0 bits), Expect = 3.0e-155, Sum P(2) = 3.0e-155
Identities = 42/118 (35%), Positives = 58/118 (49%)
Query: 620 PVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQC- 678
P ++ V QL MGF C KA T N G E A NW+++HM++PD PL+ T
Sbjct: 634 PEIDESSVMQLAEMGFPLEACRKAVYYTGNMGAEMAFNWIIAHMEEPDFAEPLAVPTYME 693
Query: 679 -----------AAID----QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+A+D + + L S GF ALKAS ++E+A DWIF +P
Sbjct: 694 SDLPSPSLPTTSALDNQPPEESISILTSMGFPRHHTIQALKASNNNLERALDWIFTHP 751
Score = 79 (32.9 bits), Expect = 2.6e-145, Sum P(2) = 2.6e-145
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQ 677
N+P ++ +S L SMGF H +A + SN +E A++W+ +H D D +S
Sbjct: 709 NQPP--EESISILTSMGFPRHHTIQA-LKASNNNLERALDWIFTHPDCEDESEAMSDTAD 765
Query: 678 CAAIDQS 684
D S
Sbjct: 766 TEPNDNS 772
Score = 62 (26.9 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 29/128 (22%), Positives = 48/128 (37%)
Query: 669 DMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWIF---NNPXXX 724
D + + ID+S V L GF E R A+ +G E A +WI P
Sbjct: 624 DSSTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYTGNMGAEMAFNWIIAHMEEPDFA 683
Query: 725 XXXXXXXXXXXXXQTPA---DAGLPDGGGSKFLKHILAYFIPNLYMLSVLHASFANNHCE 781
+P+ + L + + + + + P + + L AS NN+ E
Sbjct: 684 EPLAVPTYMESDLPSPSLPTTSALDNQPPEESISILTSMGFPRHHTIQALKAS--NNNLE 741
Query: 782 -ILDYVLT 788
LD++ T
Sbjct: 742 RALDWIFT 749
>UNIPROTKB|E2R7B0 [details] [associations]
symbol:USP13 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 SUPFAM:SSF46934
GO:GO:0008242 GO:GO:0004221 CTD:8975 GeneTree:ENSGT00390000000874
KO:K11836 OMA:PQQNGIS EMBL:AAEX03017257 EMBL:AAEX03017258
RefSeq:XP_003434175.2 Ensembl:ENSCAFT00000018199 GeneID:478640
KEGG:cfa:478640 NextBio:20853946 Uniprot:E2R7B0
Length = 863
Score = 1380 (490.8 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 287/691 (41%), Positives = 411/691 (59%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 26 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 85
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + + ++++ EY++ +VI P
Sbjct: 86 QSVYMHLKRHVREKVRGASGGALPKRRNSK--IFLDLDTDDDLNSDDYEYEDEAKLVIFP 143
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 144 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NELPVSKYANNLTQLDNGV 202
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++ GYPLAVKLGT
Sbjct: 203 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGT 262
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E++ V+DP LA+HLA FGID + TE + ++ + +W
Sbjct: 263 ITPD--GADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHGTENGLRDNDMKPRVS-EWEV 319
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQE+G ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 320 IQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 377
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
DPT D N Q+TKL HGLLSG+YS P + + +Q GI PRMFKA ++ SH
Sbjct: 378 DPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSH 437
Query: 415 PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473
PEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C + KV Y R+
Sbjct: 438 PEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQTRKVRYTERV 495
Query: 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEE 533
DY++ L + ++ ATNK+EL A++ + E + + + E+VR ++P ACL FS PE
Sbjct: 496 DYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLP--ELVRAKIPFSACLQAFSEPEN 553
Query: 534 LPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSH 593
+ DF+ FP+YLV+ ++KF WVPKK +H
Sbjct: 554 VDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSIDMPDLLDINH 613
Query: 594 MRSKXXXXXXXXXXXXX----XXDEVQS---NKPVANKDI----VSQLVSMGFNHLHCEK 642
+R++ D+ + N+ + DI V QL MGF C K
Sbjct: 614 LRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRK 673
Query: 643 AAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
A T N G E A NW++ HM++PD PL+
Sbjct: 674 AVYFTGNMGAEVAFNWIIVHMEEPDFAEPLT 704
Score = 154 (59.3 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAA------ 680
V QL MGF C KA T N G E A NW++ HM++PD PL+ A
Sbjct: 658 VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGAS 717
Query: 681 ------IDQSKVETLL----SFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+D E ++ S GF A AL+A+ ++E+A DWIF++P
Sbjct: 718 VFGATGLDNQPPEEIVAIITSMGFHRNQAIQALRATNNNLERALDWIFSHP 768
Score = 84 (34.6 bits), Expect = 9.6e-148, Sum P(2) = 9.6e-148
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMD-DPDIDMPLSQET 676
N+P ++IV+ + SMGF H + A+ +N +E A++W+ SH + + D D + E
Sbjct: 726 NQPP--EEIVAIITSMGF-HRNQAIQALRATNNNLERALDWIFSHPEFEEDSDFVIEMEN 782
Query: 677 QCAA--IDQSKVE 687
A I ++K E
Sbjct: 783 NANANIISEAKPE 795
Score = 60 (26.2 bits), Expect = 3.3e-145, Sum P(2) = 3.3e-145
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 665 DPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWI 717
D D ++Q + ID+S V L GF E R A+ +G E A +WI
Sbjct: 637 DDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWI 690
>MGI|MGI:1919857 [details] [associations]
symbol:Usp13 "ubiquitin specific peptidase 13 (isopeptidase
T-3)" species:10090 "Mus musculus" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISO] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0010506 "regulation of autophagy" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0043130
"ubiquitin binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 MGI:MGI:1919857 GO:GO:0050821 GO:GO:0006355
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006914
GO:GO:0010506 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0070536
GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0004197 GO:GO:0008242
GO:GO:0004843 GO:GO:0004221 EMBL:CH466530 CTD:8975
GeneTree:ENSGT00390000000874 KO:K11836 OMA:PQQNGIS MEROPS:C19.012
eggNOG:COG5207 HOGENOM:HOG000162311 HOVERGEN:HBG002833
OrthoDB:EOG46DM24 EMBL:AC111140 EMBL:BC090999 IPI:IPI00134255
RefSeq:NP_001013042.1 UniGene:Mm.316153 ProteinModelPortal:Q5BKP2
SMR:Q5BKP2 PhosphoSite:Q5BKP2 PaxDb:Q5BKP2 PRIDE:Q5BKP2
Ensembl:ENSMUST00000072312 GeneID:72607 KEGG:mmu:72607
UCSC:uc008owr.1 InParanoid:Q5BKP2 NextBio:336585 Bgee:Q5BKP2
Genevestigator:Q5BKP2 Uniprot:Q5BKP2
Length = 858
Score = 1372 (488.0 bits), Expect = 1.7e-154, Sum P(2) = 1.7e-154
Identities = 286/691 (41%), Positives = 410/691 (59%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 24 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 83
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + ++ ++++ EY++ +VI P
Sbjct: 84 QSVYMHLKRHMREKVRGASGGALPKRRNSK--IFLDLDMDDDLNSDDYEYEDEAKLVIFP 141
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 142 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NEVPVSKYANNLVQLDNGV 200
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++ GYPLAVKLGT
Sbjct: 201 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGT 260
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E+ V DP LA+HLA FGID Q TE + ++ + +W
Sbjct: 261 ITPD--GADVYSFQEEGPVSDPHLAKHLAHFGIDMLHTQGTENGLRDNDIKPRVS-EWEV 317
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQESG ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 318 IQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 375
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
DPT D N Q+TKL HGLLSG+YS P + + +Q GI PRMFKA ++ SH
Sbjct: 376 DPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSH 435
Query: 415 PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473
PEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C + KV Y R+
Sbjct: 436 PEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQTRKVRYTERV 493
Query: 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEE 533
DY++ L + ++ ATNK+EL ++ ++ E + + + E+VR ++P ACL F+ P+
Sbjct: 494 DYLMQLPVAMEAATNKDELITYELMRREAEANRRPLP--ELVRAKIPFSACLQAFAEPDN 551
Query: 534 LPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSH 593
+ DF+ FP+YLV+ ++KF WVP+K SH
Sbjct: 552 VDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPRKFDVSIDMPDLLDISH 611
Query: 594 MRSKXXXXXXXXXXXXX----XXDEVQS---NKPVANKDI----VSQLVSMGFNHLHCEK 642
+R++ D+ + N+ + DI V QL MGF C K
Sbjct: 612 LRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRK 671
Query: 643 AAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
A T N G E A NW++ HM++PD PL+
Sbjct: 672 AVYFTGNTGAEVAFNWIIVHMEEPDFAEPLA 702
Score = 156 (60.0 bits), Expect = 1.7e-154, Sum P(2) = 1.7e-154
Identities = 39/108 (36%), Positives = 54/108 (50%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAA------ 680
V QL MGF C KA T N G E A NW++ HM++PD PL+ A
Sbjct: 656 VMQLAEMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLAIPGYGGAGASVFG 715
Query: 681 ---IDQSKVETLL----SFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+D E ++ S GF A AL+A+ ++E+A DWIF++P
Sbjct: 716 ATGLDNQPPEEIVAIITSMGFQRNQAVQALQATNHNLERALDWIFSHP 763
Score = 80 (33.2 bits), Expect = 1.8e-146, Sum P(2) = 1.8e-146
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMD-DPDIDMPLSQET 676
N+P ++IV+ + SMGF +A + +N +E A++W+ SH + + D D + E
Sbjct: 721 NQPP--EEIVAIITSMGFQRNQAVQA-LQATNHNLERALDWIFSHPEFEEDSDFVIEMEN 777
Query: 677 QCAA--IDQSKVE 687
A + ++K E
Sbjct: 778 NANANIVSEAKPE 790
Score = 60 (26.2 bits), Expect = 2.3e-144, Sum P(2) = 2.3e-144
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 665 DPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGD-IEKATDWI 717
D D ++Q + ID+S V L GF E R A+ +G E A +WI
Sbjct: 635 DDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNTGAEVAFNWI 688
>UNIPROTKB|E1BY77 [details] [associations]
symbol:USP13 "Ubiquitin carboxyl-terminal hydrolase 13"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0010506
"regulation of autophagy" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0043130
"ubiquitin binding" evidence=ISS] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0050821
GO:GO:0006355 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006914 GO:GO:0010506 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0070536 GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0004197
GO:GO:0008242 GO:GO:0004843 GO:GO:0004221 CTD:8975
GeneTree:ENSGT00390000000874 KO:K11836 OMA:PQQNGIS
EMBL:AADN02020803 EMBL:AADN02020804 EMBL:AADN02020805
EMBL:AADN02020806 IPI:IPI00582057 RefSeq:XP_426842.2
ProteinModelPortal:E1BY77 Ensembl:ENSGALT00000014487 GeneID:429286
KEGG:gga:429286 NextBio:20830031 Uniprot:E1BY77
Length = 862
Score = 1358 (483.1 bits), Expect = 1.2e-153, Sum P(2) = 1.2e-153
Identities = 288/689 (41%), Positives = 404/689 (58%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL + +R+P+ +R++K EC S+D+P SEGGL+V +N+FL +G++H+ ++ KTG
Sbjct: 21 ELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVCMNTFLGFGREHIERHYRKTG 80
Query: 65 NPVYLHIKQ--TRKLVAPEDR--PSKKPTLLAIGVE--GGFDNNEAEYDETHSIVILPEY 118
VYLH+K+ K+ P ++ L + +E G +++ EY++ +VI P++
Sbjct: 81 QCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEANGDLSSDDFEYEDEAKLVIFPDH 140
Query: 119 VTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVII 177
+S P++E LP V +A DA+L A+ RK+ +W ++ Q S +A +L Q+DNGV I
Sbjct: 141 YEISLPNIEELPALVTIASDALLSAKSPYRKQDPDSWE-EELQASKHAKSLVQLDNGVRI 199
Query: 178 PPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTIT 237
PPSGWKC+KCD R+NLWLNLTDG +LCG+ +DG+GGN HA+EHYKETGYPLAVKLGTIT
Sbjct: 200 PPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHAMEHYKETGYPLAVKLGTIT 259
Query: 238 SDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQ 297
D GADV+S+ E++ V+DP +A+HLA FGID +Q E + ++ + +W IQ
Sbjct: 260 PD--GADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVAENGLRDNDIKPRVS-EWEVIQ 316
Query: 298 ESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADP 357
E+G ++P++GPGYTG+ NLGNSCYL A MQ +FS F Y P F+ +P DP
Sbjct: 317 EAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYVGNLP--RIFDYSPLDP 374
Query: 358 TVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQE-GIPPRMFKAVIAASHPE 416
T D N Q+ KL HGLLSG+YS P + Q+ GI P+MFKA I+ H E
Sbjct: 375 TQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQQNGISPQMFKAFISKDHTE 434
Query: 417 FSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRLDY 475
FSS RQQDA EFFLH ++ VER G +P+ F+F +EER C S KV Y R+DY
Sbjct: 435 FSSNRQQDAQEFFLHLINLVERNPVGSE--NPSDVFRFLVEERTQCCQSRKVRYTERVDY 492
Query: 476 ILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELP 535
I+ L + ++ ATNK+EL A++ LK R +E E+VR ++P ACL FS P +
Sbjct: 493 IMQLPVAMEAATNKDELIAYE-LK-RREAEAARRAPPELVRAKIPFSACLQAFSEPTNVE 550
Query: 536 DFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMR 595
DF+ FP YLV+ ++KF W+PKKL SH+R
Sbjct: 551 DFWSSALQAKSAGVKTSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSIDMPDFLDISHLR 610
Query: 596 SKXXXXXXXXXXXXXX--------XDEVQSNKPVANKDI----VSQLVSMGFNHLHCEKA 643
+ D + +N V + DI V QL MGF C KA
Sbjct: 611 AMGLQPGEEELPDIAPPIIIPEDPKDRMMNNF-VESLDIDESSVMQLAEMGFPLEACRKA 669
Query: 644 AVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
T N G E A NW+++HM++PD PL
Sbjct: 670 VYYTGNLGAEVAFNWIIAHMEEPDFAEPL 698
Score = 162 (62.1 bits), Expect = 1.2e-153, Sum P(2) = 1.2e-153
Identities = 39/111 (35%), Positives = 56/111 (50%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL----------SQET 676
V QL MGF C KA T N G E A NW+++HM++PD PL S
Sbjct: 653 VMQLAEMGFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGAASSGVA 712
Query: 677 QCAAID------QSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
A+ + V ++S GF +A ALKA+ ++E+A +WIF++P
Sbjct: 713 GLGAVGLDNQPPEEMVSIIISMGFQRSLAIQALKATNNNLERALEWIFSHP 763
Score = 68 (29.0 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSH 662
N+P +++VS ++SMGF +A T+N +E A+ W+ SH
Sbjct: 721 NQPP--EEMVSIIISMGFQRSLAIQALKATNN-NLERALEWIFSH 762
Score = 62 (26.9 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 664 DDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWI 717
+DP D ++ + ID+S V L GF E R A+ +G E A +WI
Sbjct: 632 EDPK-DRMMNNFVESLDIDESSVMQLAEMGFPLEACRKAVYYTGNLGAEVAFNWI 685
>FB|FBgn0035402 [details] [associations]
symbol:CG12082 species:7227 "Drosophila melanogaster"
[GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA;TAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 EMBL:AE014296 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
GeneTree:ENSGT00390000000874 KO:K11836 eggNOG:COG5207 OMA:DDMVEDP
EMBL:AY121697 RefSeq:NP_001246589.1 RefSeq:NP_647773.1
UniGene:Dm.11718 SMR:Q9VZU7 IntAct:Q9VZU7 MINT:MINT-767355
STRING:Q9VZU7 MEROPS:C19.A28 EnsemblMetazoa:FBtr0073114
EnsemblMetazoa:FBtr0307308 GeneID:38375 KEGG:dme:Dmel_CG12082
UCSC:CG12082-RA FlyBase:FBgn0035402 InParanoid:Q9VZU7
OrthoDB:EOG4NGF2M GenomeRNAi:38375 NextBio:808307 Uniprot:Q9VZU7
Length = 827
Score = 1272 (452.8 bits), Expect = 1.9e-153, Sum P(2) = 1.9e-153
Identities = 280/708 (39%), Positives = 404/708 (57%)
Query: 81 EDRPSKKPTLLAIGVEGGFDNNEA--EYD--ETHSIVILPEY-VTLSYPSVELPEKVRLA 135
E P +K T LAIGVEGG++ ++ +Y+ +T+SIV+ P L YP ELP +V +
Sbjct: 92 EAGPERKITRLAIGVEGGYNESDMAKKYEIKDTYSIVVAPHLDKKLPYPDPELPMRVTQS 151
Query: 136 VDAILMAEGA----ERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWKCAKCDKRD 191
V+AIL A+ A E+ + W + +Q S YA NLQQ+DNG IPPSGW+C KCD +
Sbjct: 152 VEAILAADSAIAKLEKATLMGTWDGEVRQASKYADNLQQLDNGKRIPPSGWQCEKCDLTN 211
Query: 192 NLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGADVFSYPED 251
NLWLNLTDG I+CGR+ +DG+GGN+HAVEHY+ TG+PLAVKLGTIT+D + +DVFSYPED
Sbjct: 212 NLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLAVKLGTITADGK-SDVFSYPED 270
Query: 252 DSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF-DWNRIQESGQDVEPLFGPG 310
+ V+DP L +HL+ FGI+ ++++K+E + E ELD N +W + ES +++P+ GPG
Sbjct: 271 EMVLDPHLERHLSHFGINMAAMKKSEKSMVELELDINQRIGEWTALTESESELQPVAGPG 330
Query: 311 YTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAH 370
YTG+ NLGNSCY+ + MQV+F F R+ + F+ P+DP D N+Q+ KL
Sbjct: 331 YTGMRNLGNSCYINSVMQVLFVIPDFQQRF-VGTGAERYFKEFPSDPANDFNIQMAKLGT 389
Query: 371 GLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFL 430
GL SGKYS A+ GI P MFK ++ +HP+FS+ +QQDA +F+L
Sbjct: 390 GLQSGKYSSIAENTLDTDHST--------GISPAMFKNIVGKNHPDFSTKQQQDANDFYL 441
Query: 431 HFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRLDYILSLGIPLDEATNK 489
H + ++R + + + +P + KF +E+R+ C S KV YN R +Y L +PLD+ATN
Sbjct: 442 HLLTLLDR--NSRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNL 499
Query: 490 EELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELPDFYXXXXXXXXXXX 549
+E+ FQ+ K G+ + + +IVR +VPL+ACL F PE + FY
Sbjct: 500 DEVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAIGSKTNAR 559
Query: 550 XXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMRSKXXXXXXXXXXXX 609
PD L++H+ KF + WVPKKL S+ RS
Sbjct: 560 KITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEALPE 619
Query: 610 XXXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID 669
+EV K ++ ++S+L++MGF C++A +T N+G+E A NWL+ H+ D DI
Sbjct: 620 PATEEV---KFAFDEAVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDIS 676
Query: 670 MPL----SQETQCAA----IDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
P + CAA + + L+S GF E A ALKA+ G++E+ATDWIF++
Sbjct: 677 EPFVVPNNSIGDCAANQFVANPESLAMLMSMGFDERQAVAALKATDGNVERATDWIFSHA 736
Query: 722 XXX----XXXXXXXXXXXXXQTPADAGLPDGGGSKFLKHILAYFIPNL 765
TP DG G K+ L FI ++
Sbjct: 737 DSIGVEDAAPAANSSAAAASSTPNKTNYRDGRG----KYRLVAFISHM 780
Score = 246 (91.7 bits), Expect = 1.9e-153, Sum P(2) = 1.9e-153
Identities = 64/168 (38%), Positives = 96/168 (57%)
Query: 4 MDLLRSNLSRVRIPEPTNR----IFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWN 59
M+ LR +LS+V +P + I+K EC S+D P + GL+V L+SFL +G+ +V
Sbjct: 1 MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREY 60
Query: 60 FEKTGNPVYLHIKQTRKLVAPEDR----------PSKKPTLLAIGVEGGFDNNEA----E 105
+KTGN V+LHI++ + + D P +K T LAIGVEGG++ ++ E
Sbjct: 61 ADKTGNRVFLHIQRVKTIKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDMAKKYE 120
Query: 106 YDETHSIVILPEY-VTLSYPSVELPEKVRLAVDAILMAEGAERKEQVA 152
+T+SIV+ P L YP ELP +V +V+AIL A+ A K + A
Sbjct: 121 IKDTYSIVVAPHLDKKLPYPDPELPMRVTQSVEAILAADSAIAKLEKA 168
>RGD|1306044 [details] [associations]
symbol:Usp13 "ubiquitin specific peptidase 13" species:10116
"Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISO] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0010506 "regulation of autophagy" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043130 "ubiquitin binding" evidence=ISO] [GO:0050821 "protein
stabilization" evidence=ISO] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISO] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1306044
GO:GO:0050821 GO:GO:0006355 GO:GO:0046872 GO:GO:0008283
GO:GO:0008270 GO:GO:0010506 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0070536 SUPFAM:SSF46934 GO:GO:0004197 GO:GO:0008242
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00390000000874
OrthoDB:EOG46DM24 IPI:IPI00557979 Ensembl:ENSRNOT00000048030
UCSC:RGD:1306044 ArrayExpress:D3ZDI9 Uniprot:D3ZDI9
Length = 835
Score = 1333 (474.3 bits), Expect = 3.6e-150, Sum P(2) = 3.6e-150
Identities = 284/693 (40%), Positives = 408/693 (58%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 24 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 83
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + ++ ++++ EY++ +VI P
Sbjct: 84 QSVYMHLKRHMREKVRGASGGALPKRRNSK--LFLDLDMDDDLNSDDYEYEDEAKLVIFP 141
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 142 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NELPVSKYANNLVQLDNGV 200
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++ GYPLAVKLGT
Sbjct: 201 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGT 260
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E+ V DP LA+HLA FGID Q TE + ++ + +W
Sbjct: 261 ITPD--GADVYSFQEEGPVSDPHLAKHLAHFGIDMLHTQGTENGFRDNDIKLRVS-EWEV 317
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQESG ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 318 IQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 375
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
DPT D N Q+TKL HGLLSG+YS P + + +Q GI PRMFKA ++ SH
Sbjct: 376 DPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSH 435
Query: 415 PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRL 473
PEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C + KV Y R+
Sbjct: 436 PEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQTRKVRYTERV 493
Query: 474 DYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEE 533
DY++ L + ++ ATNK+EL A++ ++ E + + + E+VR ++P ACL F+ P+
Sbjct: 494 DYLMQLPVAMEAATNKDELIAYELMRREAETNRRPLP--ELVRAKIPFSACLQAFAEPDN 551
Query: 534 LPDFYXXXXXXXXXXXXXXXXXXF-PDY-LVLHMRKFVMEAGWVPKKLXXXXXXXXXXXX 591
+ DF+ P Y V +++ F + WVP+K
Sbjct: 552 VDDFWSSALQAKSAGVKNTHRFSLVPQYNTVQYVKGFSLGLDWVPRKFDVSIDMPDLLDI 611
Query: 592 SHMRSKXXXXXXXXXXXXX----XXDEVQS---NKPVANKDI----VSQLVSMGFNHLHC 640
SH+R++ D+ + N+ + DI V QL MGF C
Sbjct: 612 SHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEAC 671
Query: 641 EKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
KA T N G E A NW++ HM++PD PL+
Sbjct: 672 RKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLA 704
Score = 154 (59.3 bits), Expect = 3.6e-150, Sum P(2) = 3.6e-150
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS---------QETQ 677
V QL MGF C KA T N G E A NW++ HM++PD PL+
Sbjct: 658 VMQLAEMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLAIPGYGGAGASAFG 717
Query: 678 CAAIDQSKVETLLSF----GFSEEVARNALKASGGDIEKATDWIFNNP 721
+D E +++ GF A AL+A+ ++E+A DWIF++P
Sbjct: 718 ATGLDNQPPEEIVAIITAMGFQRSQAVQALQATNHNLERALDWIFSHP 765
Score = 60 (26.2 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 665 DPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGD-IEKATDWI 717
D D ++Q + ID+S V L GF E R A+ +G E A +WI
Sbjct: 637 DDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNTGAEVAFNWI 690
>DICTYBASE|DDB_G0291239 [details] [associations]
symbol:ubpA "putative ubiquitin carboxyl-terminal
hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
dictyBase:DDB_G0291239 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221 KO:K11836
eggNOG:COG5207 EMBL:U48271 RefSeq:XP_635198.2
ProteinModelPortal:P54201 SMR:P54201 MEROPS:C19.104 GeneID:8628143
KEGG:ddi:DDB_G0291239 ProtClustDB:CLSZ2429562 Uniprot:P54201
Length = 837
Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
Identities = 291/754 (38%), Positives = 440/754 (58%)
Query: 4 MDLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKT 63
M+L L +++P +R++K ECC FDTP + GLF+DL LA+ K +V N +KT
Sbjct: 1 MELF-PELKNIKVPTEKSRLWKDECCYCFDTPENGEGLFIDLIGLLAFSKKYVQLNHQKT 59
Query: 64 GNPVYLHIKQT----RKLVAP------EDRPSKKPTLLAIGVEGGF--DNNEAEYDETHS 111
+ +YL+ K+ K+ +P E++P KK LAIGVEGGF ++ E +Y+E +
Sbjct: 60 HHHLYLNFKKVAIVNEKVKSPTIENGGEEKPPKK---LAIGVEGGFNVEDEEIKYEEHYK 116
Query: 112 IVILPE--YVTLSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQ 169
+ I P+ ++ LS P + PE VR+ + I RKE++ +W A+ SA+A ++
Sbjct: 117 LYIFPDDKFLELSDPII--PENVRVCCEKIKTLNSQSRKEEIVSWNAESVFPSAFAESII 174
Query: 170 QIDNGVI-IPPSG-WKC--AKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKET 225
Q+DN I P G W+C CDK +NLWLNLTDG I CGR+ DGTGGN HA EH+ +T
Sbjct: 175 QLDNNTKKIDPKGPWRCDIEGCDKVENLWLNLTDGFIGCGRKYADGTGGNGHAQEHFNQT 234
Query: 226 GYPLAVKLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAEREL 285
YP++VKLGTIT D ADV+SYPEDD V DPLL QHL +G++ + + KTE + AE EL
Sbjct: 235 QYPISVKLGTITKD--HADVYSYPEDDMVSDPLLFQHLTHWGLNPNVMVKTEKSMAELEL 292
Query: 286 DQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP 345
DQN NF++ +IQE G+ +E +FGPG TG+ NLGNSCY+++ +Q++F+ +F TRY
Sbjct: 293 DQNLNFEFGKIQEKGKLLENVFGPGLTGIENLGNSCYMSSVIQMIFAIDSFQTRYLKDR- 351
Query: 346 LKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRM 405
+A+F+ DPT +Q++KLAHGLLSG YS+P K Q GI P+M
Sbjct: 352 -EASFKDITQDPTQSFEIQMSKLAHGLLSGDYSIPLS-KPSKNANEESEAATQIGIAPKM 409
Query: 406 FKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKP----EVDPTKSFKFGIEERIS 461
FK++I ASH EFS+M+QQDA E+ + ++ +ER +P + +PT+ F+F E+RI
Sbjct: 410 FKSLIGASHAEFSTMKQQDAHEYLQYLLEYIERAEHSRPSWIQQANPTRLFQFHNEDRIE 469
Query: 462 C-PSGKVAYNRRLDYILSLGIPLDEATNKEELAAFQK-LKMERISEGKDVTNEEIVRPRV 519
C SG+V Y RRL+ ILS+ + LD+ATNK+E+A +++ LK + KD +E +RP +
Sbjct: 470 CGSSGQVKYTRRLENILSVPVNLDDATNKQEVAQYEETLKQQNGVRQKD---QEEIRPII 526
Query: 520 PLEACLSTFSAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKL 579
PL +C++ F P + DF FP+ L++H++K+ A + PKKL
Sbjct: 527 PLVSCINGFVEPYRVEDFLSPATGVKTFSLNSSRMATFPEVLIIHLKKYTYNADYTPKKL 586
Query: 580 XXXXXXXXXXXXSHMRSKXXXXXXXXXXXXXXXDEVQSNKPVANKDIVSQLVSMGFNHLH 639
+R + + +P N++++ L+SM F +
Sbjct: 587 NVFMDVPDIIDIDSLRGRGIKEGEVPLKEGTINTTTKVPEPSFNQEVLDTLLSMDFPLVR 646
Query: 640 CEKAAVNTSNAGVEEAMNWLLSHMDDPDIDM---PLSQET----------QCAAIDQSKV 686
C+KA + T E AMNW+ H +DPDID+ P++ + + V
Sbjct: 647 CKKALLATGGKDAELAMNWIFEHTEDPDIDIEQTPVNNNNNNNNSSNSNDKLFVFNSQDV 706
Query: 687 ETLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
+ ++ GF++ A+ ALK + G++E+A DW+F++
Sbjct: 707 DNIIGMGFTDSQAKLALKNTKGNLERAADWLFSH 740
>UNIPROTKB|F6V6I0 [details] [associations]
symbol:usp13 "Ubiquitin carboxyl-terminal hydrolase 13"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0010506
"regulation of autophagy" evidence=ISS] [GO:0043130 "ubiquitin
binding" evidence=ISS] [GO:0050821 "protein stabilization"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0050821 GO:GO:0006355 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0006914 GO:GO:0010506
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0070536 GO:GO:0043130
GO:GO:0004197 GO:GO:0008242 GO:GO:0004843 GO:GO:0004221
EMBL:AAMC01001929 EMBL:AAMC01001930 EMBL:AAMC01001931
EMBL:AAMC01001932 EMBL:AAMC01001933 EMBL:AAMC01001934
Uniprot:F6V6I0
Length = 846
Score = 1254 (446.5 bits), Expect = 8.5e-134, Sum P(2) = 8.5e-134
Identities = 259/601 (43%), Positives = 369/601 (61%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL + +R+P+ +R++K EC S+D+P S+GGL+V +++FL +G++HV ++ KTG
Sbjct: 7 ELLVPYMPTIRVPKSGDRVYKTECAFSYDSPESDGGLYVCMSTFLGFGREHVERHYRKTG 66
Query: 65 NPVYLHIKQTRKLVAPEDR----PSKKPTLLAIGVEGGFDNN--EAEYDETHSIVILPEY 118
VY+H+K+ +L A P + L + +E + N + EY++ +VI P++
Sbjct: 67 QSVYMHLKRHIRLKATGASGGAFPKRINGRLFLDLENNTEMNTEDYEYEDEAKLVIFPDH 126
Query: 119 VTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVII 177
++ P++E LP V +A DA+L ++ RK +W ++ Q S +A NL QIDNGV I
Sbjct: 127 FEIALPNIEELPALVTIACDAVLNSKSPYRKLDQESWE-EELQVSKFANNLVQIDNGVKI 185
Query: 178 PPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTIT 237
PPSGWKC+KCD ++NLWLNLTDG I+CGR G+GGN HA+EH+K+ GYPLAV+LG+IT
Sbjct: 186 PPSGWKCSKCDLQENLWLNLTDGSIMCGRWFCSGSGGNGHALEHHKQMGYPLAVRLGSIT 245
Query: 238 SDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQ 297
D GADV+S+ E+++V+DP LA+HLA FGID +Q +E + E+ N +W IQ
Sbjct: 246 PD--GADVYSFDEEEAVIDPHLAKHLAHFGIDMLQMQGSENGVLDNEVKPRVN-EWEVIQ 302
Query: 298 ESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADP 357
E+G ++P+FG GYTG+ NLGNS YL MQV+FS F R Y L F+ AP DP
Sbjct: 303 ETGLKLKPMFGSGYTGIKNLGNSSYLTTVMQVIFSIPEF-QRAYVGN-LTRIFDYAPLDP 360
Query: 358 TVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQ-EGIPPRMFKAVIAASHPE 416
T D + Q+ KL HGLLSG++S P + Q +GI RMFKA+++ H E
Sbjct: 361 TQDFSTQMAKLGHGLLSGQFSKPPMKSELIEQVMKEEHKPQPKGINTRMFKALMSKGHTE 420
Query: 417 FSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-PSGKVAYNRRLDY 475
FSS RQQDA EFFLHF++ VER G +P+ F+F +EER C S KV Y R+DY
Sbjct: 421 FSSNRQQDAEEFFLHFINLVERNSIGAE--NPSDVFRFLVEERTQCCQSRKVRYTERVDY 478
Query: 476 ILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSAPEELP 535
I+ L +P++ ATNKEEL A+ LK R +E E+VR ++P ACL F+ PE +P
Sbjct: 479 IMQLPVPMETATNKEELIAYD-LK-RREAESAKRPPPELVRAKIPFSACLQAFTEPENVP 536
Query: 536 DFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMR 595
DF+ FP+YLV+ ++KF WVPKKL +H+R
Sbjct: 537 DFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKLDVSIDMPDLLDINHLR 596
Query: 596 S 596
+
Sbjct: 597 A 597
Score = 78 (32.5 bits), Expect = 8.5e-134, Sum P(2) = 8.5e-134
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 686 VETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
V + S GF A AL+A+ ++E+A DW+F++P
Sbjct: 714 VALICSMGFPRNHALQALRATNNNLERALDWMFSHP 749
Score = 74 (31.1 bits), Expect = 2.3e-133, Sum P(2) = 2.3e-133
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 618 NKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPD 667
N+P ++IV+ + SMGF H +A T+N +E A++W+ SH + +
Sbjct: 707 NQPP--EEIVALICSMGFPRNHALQALRATNN-NLERALDWMFSHPESEE 753
>UNIPROTKB|I3LGW9 [details] [associations]
symbol:LOC100524648 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000000874 EMBL:CU695053
Ensembl:ENSSSCT00000024882 OMA:VCDCESA Uniprot:I3LGW9
Length = 425
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 180/385 (46%), Positives = 259/385 (67%)
Query: 5 DLLRSNLSRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+LL ++ +R+P +R++K EC S+D+P SEGGL+V +N+FLA+G++HV +F KTG
Sbjct: 26 ELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTG 85
Query: 65 NPVYLHIKQ-TRKLVA-------PEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILP 116
VY+H+K+ R+ V P+ R SK L + + ++++ EY++ +VI P
Sbjct: 86 QSVYMHLKRHVREKVRGASGGALPKRRNSK--IFLDLDTDDDLNSDDYEYEDEAKLVIFP 143
Query: 117 EYVTLSYPSVE-LPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
++ ++ P++E LP V +A DA+L ++ RK+ W ++ S YA NL Q+DNGV
Sbjct: 144 DHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWE-NELPVSKYANNLTQLDNGV 202
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
IPPSGWKCA+CD R+NLWLNLTDG +LCG+ +D +GGN HA+EHY++ GYPLAVKLGT
Sbjct: 203 RIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDLGYPLAVKLGT 262
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNR 295
IT D GADV+S+ E+++V+DP LA+HLA FGID + TE + ++ + +W
Sbjct: 263 ITPD--GADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHGTENGLQDNDIKPRVS-EWEV 319
Query: 296 IQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPA 355
IQE+G ++P++GPGYTGL NLGNSCYL++ MQ +FS F Y P F+ +P
Sbjct: 320 IQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLP--RIFDYSPL 377
Query: 356 DPTVDLNMQLTKLAHGLLSGKYSVP 380
DPT D N Q+TKL HGLLSG+YS P
Sbjct: 378 DPTQDFNTQMTKLGHGLLSGQYSKP 402
>POMBASE|SPBC6B1.06c [details] [associations]
symbol:ubp14 "ubiquitin C-terminal hydrolase Ubp14"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 PomBase:SPBC6B1.06c GO:GO:0005654 GO:GO:0043161
GO:GO:0046872 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
GO:GO:0008270 GenomeReviews:CU329671_GR InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 EMBL:D83659 KO:K11836 eggNOG:COG5207
HOGENOM:HOG000162311 OMA:DDMVEDP PIR:T40647 RefSeq:NP_596085.1
ProteinModelPortal:Q11119 STRING:Q11119 MEROPS:C19.A65
EnsemblFungi:SPBC6B1.06c.1 GeneID:2541157 KEGG:spo:SPBC6B1.06c
OrthoDB:EOG470XRN NextBio:20802270 Uniprot:Q11119
Length = 775
Score = 674 (242.3 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 171/477 (35%), Positives = 263/477 (55%)
Query: 12 SRVRIPEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLA----YGKDHVGWNFEKTGNPV 67
+ V IP+ + I+++EC F++ EGG+ + L F + G H +FE+T +P+
Sbjct: 9 TNVVIPDNSQVIYREECVRCFNSQDEEGGIDLCLTCFQSGCGETGLKHSLVHFEQTLHPI 68
Query: 68 YLHI-KQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSYPSV 126
+ I +Q ++ + D P +K T L I D++E YD + L + L +
Sbjct: 69 VVTIARQPKQKI--NDEPPQKITKLEIRE----DSDEDLYDYFYVPKCLVCNIILD---I 119
Query: 127 ELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWKCAK 186
+ P + L+++A+ A A K Q+ AW ++ T + +NL + + V + C+K
Sbjct: 120 QDP-LLSLSLEAMKNATKASNKSQLTAWE-NELTTCDHIINLPENETYVTNLDNA-TCSK 176
Query: 187 CDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGADVF 246
CD +NLW+ LT G + CGR+ + G GGN HA+ HY +TG+PLAVKL +I+ D + AD++
Sbjct: 177 CDLAENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLAVKLKSISPDGQ-ADIY 235
Query: 247 SYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVEPL 306
Y D+ +DP + H+ FGID + L KTE + AE +L+QN N+D+ +E + L
Sbjct: 236 CYSCDEERIDPNIKTHMLNFGIDIAKLNKTEKSLAELQLEQNLNWDFGASEEDDAS-KRL 294
Query: 307 FGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLT 366
FGPG TGL NLGNSCYLA+TMQ +FS F L + + PT DL QL
Sbjct: 295 FGPGLTGLKNLGNSCYLASTMQSLFSIKEFAIHELN---LFNTYNSVCQTPTTDLQCQLG 351
Query: 367 KLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDAL 426
KLA GL+SGK+S P++ Q+G+ P MFK V+ H EF + +QQDA
Sbjct: 352 KLADGLVSGKFSKPSKIGLLNNPSSSILPY-QDGLRPFMFKDVVGQGHSEFGTSQQQDAY 410
Query: 427 EFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGK-VAYNRRLDYILSLGIP 482
EF L+ + ++ + K ++ TK F F E+++SC S K V Y+ L+L +P
Sbjct: 411 EFLLYLLGKIRKSSIAKTDI--TKIFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVP 465
Score = 213 (80.0 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 42/103 (40%), Positives = 59/103 (57%)
Query: 623 NKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAAID 682
N+ + QL +MGF + C++A + T N+ E AMNWL HM+DP+ID P+ D
Sbjct: 578 NQSAIEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKAD 637
Query: 683 QS----KVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
S V++L FGF+ AR L S +IE+A DWI N+P
Sbjct: 638 SSVSEENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHP 680
Score = 77 (32.2 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 664 DDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGG-DIEKATDWIFNN 720
D P+ + L ++T+ +QS +E L + GF + AL A+G D E A +W+F +
Sbjct: 560 DHPNDEDYLPEKTETIEWNQSAIEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEH 617
Score = 71 (30.1 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 614 EVQSNKPVANKDI----VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID 669
EV P A+ + V L GF K + ++N +E A++W+L+H D+ +
Sbjct: 628 EVSELLPKADSSVSEENVQSLCEFGFTVAQARKGLLESNN-NIERAVDWILNHPDESFEE 686
Query: 670 MPL 672
PL
Sbjct: 687 PPL 689
>CGD|CAL0005412 [details] [associations]
symbol:orf19.1516 species:5476 "Candida albicans" [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 CGD:CAL0005412 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AACQ01000007 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
KO:K11836 RefSeq:XP_722561.1 ProteinModelPortal:Q5AM59
STRING:Q5AM59 GeneID:3635769 KEGG:cal:CaO19.1516 Uniprot:Q5AM59
Length = 794
Score = 613 (220.8 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 147/432 (34%), Positives = 239/432 (55%)
Query: 19 PTN-RIFKQECCVSFDTPRSEG-GLFVDLNSFLAYG--KD--HVGWNFEKTGNPVYLHIK 72
P N +I+K +C SFDTP + GL +DL ++ AY KD + N++KTGN +YL+IK
Sbjct: 14 PANTKIYKDDCMYSFDTPENNLLGLDIDLKTYRAYSRNKDFNYTKQNYDKTGNYLYLNIK 73
Query: 73 QT------RKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSYPSV 126
+T R + +D K P + + ++ D++ Y+ SI + + SY
Sbjct: 74 KTLKPQEERNKLLYDDNGEKSPKIQKLEIKNVSDDDY--YNTEISIYDIKD--DKSYSRD 129
Query: 127 ELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWKCAK 186
EL ++ +D IL A + ++++ W + ++++++Q + + KC++
Sbjct: 130 ELSDEFNNLIDLILSANSSATEDEIKQWEQEIVPCP-HSIDVEQFETDNL---DLTKCSQ 185
Query: 187 CDKRDNLWLNLTDGMILCGRRNWDGT-GGNNHAVEHYKETGYPLAVKLGTITSDLEGADV 245
CD R+NLW+ L G + CGR+ + T GN HA+ HY+ +P+A+KLG++++D E D
Sbjct: 186 CDLRENLWICLHCGALGCGRQQYGSTLKGNGHALAHYELAQHPVAIKLGSLSADSESCDA 245
Query: 246 FSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVEP 305
+ Y +D V P LA+ L FGID ++ KTE + E +DQN N+++ +G+ +E
Sbjct: 246 YCYQCNDEVKVPHLAEKLHKFGIDLNTAVKTEKSLIELNIDQNLNWEFKLDGVNGERLES 305
Query: 306 LFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQL 365
++G G TGL NLGNSCY+ + +Q +++ + + Y+ + +P +DL QL
Sbjct: 306 VYGKGLTGLQNLGNSCYINSVLQALYTLNGY-QEYFKDKKFPDI-----NNPAIDLTSQL 359
Query: 366 TKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDA 425
KL GL SG+YSVP K Q GI P FK +I +HPEF + RQQDA
Sbjct: 360 IKLYDGLQSGRYSVPGSLKGDDY---------QLGIKPSTFKNLIGENHPEFKTQRQQDA 410
Query: 426 LEFFLHFVDQVE 437
EF L+F+D+V+
Sbjct: 411 FEFLLYFLDKVD 422
Score = 217 (81.4 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 51/175 (29%), Positives = 83/175 (47%)
Query: 557 FPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMRSKXXXXXXXXXXXXXXXDEVQ 616
FP L++++++ +E W P K+ S K E
Sbjct: 520 FPSTLIVNVQRIQLE-NWAPVKVDVPITIPYNLDLSEF--KAPVFETGEIESEQIQPESD 576
Query: 617 SNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQE- 675
+NK V N++ ++ L+SMGF C K+ +T N+ E+AMNW+ +HMDD DID P +
Sbjct: 577 NNKFVPNEEAMTTLLSMGFPEPRCIKSLYHTGNSNAEDAMNWIFAHMDDADIDDPFNPND 636
Query: 676 ---------TQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFNNP 721
T + Q ++ + + GFS ++A+ AL + DI A +W+F NP
Sbjct: 637 SHGGASTTTTDDSGPSQDLIDNVAAMGFSTQLAKKALVLNNNDISAAVEWLFANP 691
Score = 75 (31.5 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 623 NKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAAID 682
++D++ + +MGF+ +KA V +N + A+ WL ++ DD I +Q +
Sbjct: 652 SQDLIDNVAAMGFSTQLAKKALVLNNN-DISAAVEWLFANPDDDGILEDNNQSGPVVNVK 710
Query: 683 QSKVETL 689
Q K E +
Sbjct: 711 QEKSELI 717
>ASPGD|ASPL0000068862 [details] [associations]
symbol:AN7422 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0071585 "detoxification
of cadmium ion" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0071276 "cellular response to
cadmium ion" evidence=IEA] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR009060 InterPro:IPR016652
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627 Pfam:PF02148
PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 EMBL:AACD01000129
EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221 KO:K11836
eggNOG:COG5207 HOGENOM:HOG000162311 OMA:DDMVEDP OrthoDB:EOG470XRN
RefSeq:XP_680691.1 ProteinModelPortal:Q5AWA8 STRING:Q5AWA8
EnsemblFungi:CADANIAT00000511 GeneID:2869359 KEGG:ani:AN7422.2
Uniprot:Q5AWA8
Length = 697
Score = 527 (190.6 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 134/373 (35%), Positives = 196/373 (52%)
Query: 127 ELPEKV-RLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGVIIPPSGWKCA 185
E P K+ +LA++A + + +V ++ + + LQ + GV+ + K
Sbjct: 22 EPPHKISKLAINAETDEDRYDTSTRVVCYSCGRDDVGEPSGKLQSVIEGVMHATTFSKRE 81
Query: 186 --KCDKRDNLWLNLTDGMIL----------CGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
K +++ + T G+I CGR + GTGGN+H + H+ T + +AVKL
Sbjct: 82 EIKAWEQEFIPCEHTTGLIQQESKRIKSQGCGRSQFGGTGGNSHGLAHFNATSHAVAVKL 141
Query: 234 GTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDW 293
G+IT+D AD++ Y ++ +DP LA HL +GID + +KTE + E +++QN +D+
Sbjct: 142 GSITAD-GSADIYCYKCNEERIDPDLATHLYHWGIDLAGREKTEKSLMEMQVEQNLKWDF 200
Query: 294 NRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYY--TQEPLKAAFE 351
E GQD+ P+FG G TGL NLGNSCYL++ +Q +F F RYY ++P A
Sbjct: 201 LMTTEDGQDLTPVFGAGLTGLSNLGNSCYLSSVVQCLFDLPEFQRRYYHPNEDPPLAE-- 258
Query: 352 AAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIA 411
P D QL KLA G LSG+YS P + Q+G+ P MFK +I
Sbjct: 259 ----TPAADFETQLRKLADGTLSGRYSRP--DDKTVASPKPQEIRHQKGLAPSMFKHLIG 312
Query: 412 ASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPSGK-VAYN 470
HPEFS+MRQQDA EF LH V +P SFKF IE+R+ C + V Y
Sbjct: 313 RDHPEFSTMRQQDAFEFLLHVFKHVTLSKHPVGMDNPIDSFKFSIEQRLQCLKCRGVRY- 371
Query: 471 RRLDYILSLGIPL 483
RLD ++ IP+
Sbjct: 372 -RLDEQDNISIPV 383
Score = 266 (98.7 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 71/207 (34%), Positives = 98/207 (47%)
Query: 519 VPLEACLSTFSAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKK 578
V L CL F+A E + D P LV++ R+F + WVP K
Sbjct: 403 VTLYDCLDAFTADETV-DLRCAHCNSQEKFSKRSAFRTMPAELVINARRFEL-INWVPTK 460
Query: 579 LXXXXXXXXXXXXSHMRSKXXXXXXXXXXXXXXXDEVQSNKPVANKDIVSQLVSMGFNHL 638
L S DE V N D ++QL++MGF +
Sbjct: 461 LDIPVEVEDAPIDL---SCYLSTGPGEGEDLLPEDEETGGFEV-NMDTLNQLLAMGFPRV 516
Query: 639 HCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQE--TQCAAIDQ--SKVETLLSFGF 694
CEKA +T N+ E AMNWLLSHMDDPDID P+ ++ ++ A +Q +K+ L G
Sbjct: 517 RCEKALYSTGNSDAEAAMNWLLSHMDDPDIDEPVHKKRVSEFGANEQDLAKIAQLGDMGI 576
Query: 695 SEEVARNALKASGGDIEKATDWIFNNP 721
+ AR AL A+GGDI +A DW+F++P
Sbjct: 577 DDSRARKALTATGGDINRAIDWVFSHP 603
Score = 61 (26.5 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPD 667
++QL MG + KA T + A++W+ SH D D
Sbjct: 568 IAQLGDMGIDDSRARKALTATGG-DINRAIDWVFSHPGDED 607
>WB|WBGene00020839 [details] [associations]
symbol:usp-5 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0040010 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 GO:GO:0040011 GO:GO:0040017 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0008242
GO:GO:0004221 EMBL:FO081496 GeneTree:ENSGT00390000000874 KO:K11836
eggNOG:COG5207 HOGENOM:HOG000162311 OMA:DDMVEDP PIR:T25921
RefSeq:NP_491765.2 ProteinModelPortal:P91502 SMR:P91502
MEROPS:C19.A41 PaxDb:P91502 EnsemblMetazoa:T27A3.2 GeneID:172296
KEGG:cel:CELE_T27A3.2 UCSC:T27A3.2 CTD:172296 WormBase:T27A3.2
InParanoid:P91502 NextBio:874887 Uniprot:P91502
Length = 789
Score = 701 (251.8 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 171/495 (34%), Positives = 265/495 (53%)
Query: 7 LRSNLSRVRIPEPT--NRIFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNFEKTG 64
+RS + PT +IFK +C F P + GL++ L ++ A+ ++H +G
Sbjct: 7 VRSAVDAGAFIRPTFDQKIFKDQCAYCFKDPHGKDGLYISLKNYHAFCREHAEIYGTTSG 66
Query: 65 NPVYLHIKQTRKLVAP--EDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLS 122
N +++ + T+K++ + P+ K T L I + F E+++ + +V+ PEY +
Sbjct: 67 NTLFVQFESTKKIIEERTDGEPTSKMTKLTIDSDPKF-----EFEDKYCVVVHPEY-SQQ 120
Query: 123 YPSVE-LPEKVRLAVDAILMAEGAERKEQVA----AWTADKKQTSAYAMNLQQIDNGVII 177
+V+ LPE + A+ I AER ++ AW A+ K + + NL+Q DNG +
Sbjct: 121 VKNVQNLPE-IAEAIAQIANTTSAERLSLLSSTSNAWDAEIKLITKH-QNLEQQDNGKHL 178
Query: 178 PPSGWKCAK--CDKRDNLWLNLTDGMILCGRRNW--DG--TGGNNHAVEHYKETGYPLAV 231
+GW C C DNLWLNLTDG + CGR + DG T GN H +++ T +PL V
Sbjct: 179 ALTGWTCEVEGCGLNDNLWLNLTDGAVRCGRSQFLSDGKKTNGNGHMQDYFDSTRFPLVV 238
Query: 232 KLGTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNF 291
KLGTI+S+LE DV+SY EDD+V+DP L +HL FG+D + ++KT +T E ELD N +
Sbjct: 239 KLGTISSNLELIDVYSYDEDDAVIDPNLEKHLKHFGLDPTKMEKTAKSTMEMELDMNEKW 298
Query: 292 DWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFE 351
+W++ E G +EP+FGPGYTGLVN G+SCY+ + +Q + + +F TRY ++ L+
Sbjct: 299 EWSKCTEDGLLLEPIFGPGYTGLVNTGSSCYMNSVLQALVTVDSFQTRY-GEQGLETLVN 357
Query: 352 AAPADPTV-DLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVI 410
P D D N Q +K+ +LSG YS I P FK V
Sbjct: 358 C-PLDKLHNDFNAQFSKVVRAMLSGDYSSEMDPT-------------NNHIKPLQFKRVA 403
Query: 411 AASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISCP-SGKVAY 469
A +H +FS+ +QQD E+ +++ +S +DPT SFKF R + +V Y
Sbjct: 404 AGNHRDFSTSKQQDVEEYIRFLFEKIAE-NSRTEVIDPTDSFKFKAINRFEDRGTRRVRY 462
Query: 470 NRRLDYILSLGIPLD 484
+ + ++ L I D
Sbjct: 463 TDQEEMLIRLPISGD 477
Score = 175 (66.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 71/301 (23%), Positives = 119/301 (39%)
Query: 435 QVERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRLDYILSLGIPLDEATNKEELAA 494
Q +RV +G D + S + +EE I K+A N R + I +A N+ E
Sbjct: 398 QFKRVAAGNHR-DFSTSKQQDVEEYIRFLFEKIAENSRTEVIDPTDSFKFKAINRFEDRG 456
Query: 495 FQKLKMERISEG--KDVTNEEIVRP--------RVPLEACLSTFSAPEELPDFYXXXXXX 544
++++ E + + +++RP V ++A + + +++ D+
Sbjct: 457 TRRVRYTDQEEMLIRLPISGDLLRPIPDTENRYSVDMKAAIHAYFDVQKIDDYISPITGE 516
Query: 545 XXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMRSKXXXXXXX 604
FPDYL + KF KKL S R
Sbjct: 517 PKGATNTISMKTFPDYLFFQVSKFAYNVDGTQKKLDMELEIEEELDLSGYRGHGKLEHEI 576
Query: 605 XXXXXX-XXDEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHM 663
+ P + + + +L+ MGF C +AA SN VE A NWL+ HM
Sbjct: 577 ALPDEEPTAPRTTPDIPASVRFVAGELMLMGFCENACYRAAYY-SNGNVEIASNWLMEHM 635
Query: 664 DDPDID----MPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIEKATDWIFN 719
DD DI+ +P + +D + V +++ GFS A+ ALK + +A +W+F
Sbjct: 636 DDSDINDLFVIPSGTPSARGEVDPNLVASIVEMGFSNHQAKYALKQVP-TVAEAVEWLFA 694
Query: 720 N 720
N
Sbjct: 695 N 695
Score = 65 (27.9 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 625 DIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID---MPLSQETQCAAI 681
++V+ +V MGF++ H K A+ V EA+ WL ++MD ++ + LS + ++
Sbjct: 660 NLVASIVEMGFSN-HQAKYALKQVPT-VAEAVEWLFANMDSIPVESAAVGLSSDAPEPSV 717
Query: 682 DQSKVETLLSFG 693
+S + G
Sbjct: 718 TESATQKTFKDG 729
>UNIPROTKB|G4MXB0 [details] [associations]
symbol:MGG_08270 "Ubiquitin carboxyl-terminal hydrolase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:CM001232 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221 KO:K11836
RefSeq:XP_003715815.1 ProteinModelPortal:G4MXB0
EnsemblFungi:MGG_08270T0 GeneID:2678560 KEGG:mgr:MGG_08270
Uniprot:G4MXB0
Length = 787
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 180/512 (35%), Positives = 266/512 (51%)
Query: 17 PEPTNRIFKQECCVSFDTPRSEGGLFVDLNSFLA--YGKD-HVGWNFEKTGNPVYLHIKQ 73
P P +++++C FD+ GL V L F G+ H + +P+ L++++
Sbjct: 14 PTPAQSVYREDCTQCFDSIDGPDGLDVCLQCFNGGCVGERYHAKLHHLIWSHPLVLNVRR 73
Query: 74 TRKLVAPEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSIVILPEYVTLSYPSVELPEKVR 133
TRK + D P K + LAI E EA+ + H+ V + + + K+
Sbjct: 74 TRKHI-DRDEPPMKMSKLAIAAE-----TEADRYDYHTKV---KCLDCESELDKAHPKLA 124
Query: 134 LAVDAILMAEGAERKEQVAAWTADKKQTSA-YAMNLQQIDNGVIIPPSGWKCAKCDKRDN 192
VD ++ A RKE+V AW +++ TS + + LQQ + I C+KCD +N
Sbjct: 125 KVVDGVMTANTFSRKEEVKAW--EQELTSCEHILTLQQDEPRQIASNELGTCSKCDLNEN 182
Query: 193 LWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEG-ADVFSYPED 251
LWL L G + CGR + G G++HA+ H E+G+ +AVKLG+IT EG ADV+ Y D
Sbjct: 183 LWLCLQCGALGCGRAQFGGVSGHSHALAHATESGHGVAVKLGSITP--EGTADVYCYSCD 240
Query: 252 DSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQDVEPLFGPGY 311
+ VD L HLA +GI+ + +KTE + E +++QN ++++ E G++++PLFGPG
Sbjct: 241 EERVDENLGHHLANYGINIAEREKTEKSLTEMQIEQNLRWEFSMTTEDGKELKPLFGPGL 300
Query: 312 TGLVNLGNSCYLAATMQVMFSTHAFCTRY--YTQEPLKAAFEAAPADPTVDLNMQLTKLA 369
TGL NLGNSCYLA+ +Q +F AF RY TQE L DP DL QL K+
Sbjct: 301 TGLKNLGNSCYLASIIQCLFDMDAFQKRYGQVTQE-LPGI-----QDPAADLETQLRKIG 354
Query: 370 HGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFF 429
GLLSG+YS P + Q+G+ P M K ++ H EFS+MRQQDA E
Sbjct: 355 DGLLSGRYSKP--DSDVVASEHSAELPYQKGLQPSMLKHLVGRGHEEFSTMRQQDAFELL 412
Query: 430 LHFVDQVERVHSGKPEVDPTKSFKFGIEERISCPS-GKVAYNRRLDYILSLGIPLDEATN 488
H + + R P DPT+ F+F +E+R+ C KV Y + + +PL++
Sbjct: 413 QHLIKLISRAKHPSPADDPTQDFRFILEQRLQCLGCKKVRYTTNEQDSIFIDVPLEKLPV 472
Query: 489 KE----ELAAFQKLKMERISEGKD-VTNEEIV 515
+E E K +SE D T EEIV
Sbjct: 473 EEGGETEGNTGAAYKPVTLSECLDRFTAEEIV 504
Score = 356 (130.4 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 105/373 (28%), Positives = 158/373 (42%)
Query: 398 QEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIE 457
Q+G+ P M K ++ H EFS+MRQQDA E H + + R P DPT+ F+F +E
Sbjct: 381 QKGLQPSMLKHLVGRGHEEFSTMRQQDAFELLQHLIKLISRAKHPSPADDPTQDFRFILE 440
Query: 458 ERISCPSGKVAYNRRLDYILSLGIPLDEATNKEELAAFQKLKMER--ISEGKDVT-NEEI 514
+R+ C K ++ Y TN+++ + F + +E+ + EG + N
Sbjct: 441 QRLQCLGCK-----KVRY----------TTNEQD-SIFIDVPLEKLPVEEGGETEGNTGA 484
Query: 515 VRPRVPLEACLSTFSAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGW 574
V L CL F+A EE+ + P LV++ RK + W
Sbjct: 485 AYKPVTLSECLDRFTA-EEIVELTCSSCGSKAGYTKRSCFKTLPQVLVVNARKMTI-VNW 542
Query: 575 VPKKLXXXXXXXXXXXXSHMRSKXXXXXXXXXXXXXXXDEVQSNKPV--ANKDIVSQLVS 632
VP K+ ++ D S+ P N + V+QL +
Sbjct: 543 VPIKVDVPVLVNDD---PYLLDNYLSQGQQPGEELLPEDASSSSAPAFTPNPEAVAQLEA 599
Query: 633 MGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAAI-----DQSKVE 687
MGF CEKA T N+ AM WL HM+DPDID PL E D S +E
Sbjct: 600 MGFPRNRCEKALHATGNSDANTAMEWLFGHMEDPDIDEPLKLEGSGDGAGGFTADPSSIE 659
Query: 688 TLLSFGFSEEVARNALKASGGDIEKATDWIFNNPXXXXXXXXXXXXXXXXQTPADAGLPD 747
L + GF + + ALK + G++E+A +W+F++P + PA G D
Sbjct: 660 MLGAMGFDAKKSTKALKETSGNVERAVEWLFSHPDDDGSMEDDSAAASGEKPPA--GKSD 717
Query: 748 GGGSKFLKHILAY 760
LK I+ +
Sbjct: 718 VPAQYQLKSIVCH 730
>GENEDB_PFALCIPARUM|PFD0680c [details] [associations]
symbol:PFD0680c "ubiquitin carboxyl-terminal
hydrolase a, putative" species:5833 "Plasmodium falciparum"
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000502
GO:GO:0006511 EMBL:AL844503 GO:GO:0008242 GO:GO:0004221 HSSP:Q93009
InterPro:IPR015368 Pfam:PF09288 KO:K11836 RefSeq:XP_001351447.1
ProteinModelPortal:Q8I1U8 IntAct:Q8I1U8 MINT:MINT-1681408
PRIDE:Q8I1U8 EnsemblProtists:PFD0680c:mRNA GeneID:812575
KEGG:pfa:PFD0680c EuPathDB:PlasmoDB:PF3D7_0413900
HOGENOM:HOG000282684 OMA:GWKCSMC ProtClustDB:CLSZ2433106
Uniprot:Q8I1U8
Length = 853
Score = 494 (179.0 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 146/465 (31%), Positives = 233/465 (50%)
Query: 9 SNLSRVRIPEPTNR--IFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNF------ 60
S +S + EPT I+ EC ++ E G+F+DL SF ++ + N+
Sbjct: 9 SLISTIVKDEPTKEEVIYLGECSITGHKDFFEDGIFIDLLSFESFSLKFLKCNYNRLSKL 68
Query: 61 --EKTGNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEA-EYDETHSIVILPE 117
E + YL+IK+ + L+ E+ K T L I EGGF+ N+ EY+ +S+ +
Sbjct: 69 SSEGKNHRFYLNIKKKKNLL--ENIEKKVITNLNINAEGGFNENKVYEYEWEYSVYDIET 126
Query: 118 --YVTLSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
Y+ L +L E V+ I+ + +K+ + W D K+ S YA +L Q++ G+
Sbjct: 127 GLYIKLE----DLDESVQKICKGIINHKNEVKKDNINKWVNDIKE-SKYAKDLVQLE-GI 180
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGG--NNH---AVEHYKETG--YP 228
I CA C N+WLNL+DG I CGR+ ++ GG NN A++H+ E+G YP
Sbjct: 181 KIKNENIHCAVCKSTKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHFYESGKKYP 240
Query: 229 LAVKLGTITSDLEGADVFSYPED--DSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELD 286
L VK+GTIT D E ADVFSY +D DSV+DP + HL GI+ +L+KTE+TT E+E++
Sbjct: 241 LVVKIGTITKDGE-ADVFSYADDENDSVIDPYIGVHLKNLGINIMNLEKTEITTLEKEIE 299
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP- 345
+N N +++ I ++ +++ + G G VNLGN+CY+ + +QV+ S RY
Sbjct: 300 ENQNINFSSILDN--NIQTICQQGKIGFVNLGNTCYMNSALQVLLSIKDISYRYLNNISD 357
Query: 346 --LKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQE---------KXXXXXXXXXX 394
L ++ D DL +Q +KL + + Y ++ K
Sbjct: 358 FLLSLDYKKKTHD---DLFLQYSKLCYMIFEEDYITKKKQYVKKFKTQCKDRNVEINYDS 414
Query: 395 XXKQEG---IPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQV 436
E I P MF+ I F + QQD E+ + ++++
Sbjct: 415 DIDDENSVSINPSMFRNCINQKSNSFCNNNQQDIYEYLSYLINEL 459
Score = 145 (56.1 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 46/249 (18%), Positives = 106/249 (42%)
Query: 483 LDEATNKEELAAFQK--LKMERISEGKDVTN---EEIVRPRVPLEACLSTFSAPEELPDF 537
++ +N + +++FQ L ++ I + N E++ + L CL+ + + + ++
Sbjct: 527 IESESNNQSISSFQNNILSLD-IPLDSSLLNGDEEKLKNVNISLLDCLNNYIKKDNIDEY 585
Query: 538 YXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMR-- 595
Y FP YL +H+++F + W KK+ MR
Sbjct: 586 YCQKEKKKIHAQKYMKFKTFPPYLFIHLKRFYADENWSAKKINIEVKTDEQLNLEFMRVQ 645
Query: 596 -SKXXXXXXXXXXXXXXXDEV--QSNKPVAN-KDIVSQLVSMGFNHLHCEKAAVNTSNAG 651
+ D + + +K + + KD++ L+ GF +A
Sbjct: 646 PNSTDVLNGQKEQETSPGDSMLQKESKLLEDHKDVLDSLLDFGFEKDKAIEAIKKVKIKN 705
Query: 652 VEEAMNWLLSHMDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIE 711
V ++++ D ++D ++ E + ++ + ++++++ G +EVA AL + +++
Sbjct: 706 VNNCISYIYGE-DTVELDDDVNCEKE--EVNSNNLDSIINLGVKKEVAMAALILNKNNLQ 762
Query: 712 KATDWIFNN 720
KA D+IF+N
Sbjct: 763 KAIDYIFSN 771
Score = 67 (28.6 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 452 FKFGIEERISCPSGKVAYNRRLDYILSLGIPLDEAT-NKEELAAFQKLKMERISEGKDVT 510
F F IE+RI S + + + ILSL IPLD + N +E +KLK IS D
Sbjct: 519 FTFEIEQRIESESNNQSISSFQNNILSLDIPLDSSLLNGDE----EKLKNVNISL-LDCL 573
Query: 511 NEEIVRPRVPLEAC 524
N I + + C
Sbjct: 574 NNYIKKDNIDEYYC 587
Score = 55 (24.4 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 11/53 (20%), Positives = 29/53 (54%)
Query: 613 DEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDD 665
D+V K N + + ++++G AA+ + +++A++++ S++DD
Sbjct: 723 DDVNCEKEEVNSNNLDSIINLGVKK-EVAMAALILNKNNLQKAIDYIFSNLDD 774
>UNIPROTKB|Q8I1U8 [details] [associations]
symbol:PFD0680c "Ubiquitin carboxyl-terminal hydrolase a,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000502
GO:GO:0006511 EMBL:AL844503 GO:GO:0008242 GO:GO:0004221 HSSP:Q93009
InterPro:IPR015368 Pfam:PF09288 KO:K11836 RefSeq:XP_001351447.1
ProteinModelPortal:Q8I1U8 IntAct:Q8I1U8 MINT:MINT-1681408
PRIDE:Q8I1U8 EnsemblProtists:PFD0680c:mRNA GeneID:812575
KEGG:pfa:PFD0680c EuPathDB:PlasmoDB:PF3D7_0413900
HOGENOM:HOG000282684 OMA:GWKCSMC ProtClustDB:CLSZ2433106
Uniprot:Q8I1U8
Length = 853
Score = 494 (179.0 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 146/465 (31%), Positives = 233/465 (50%)
Query: 9 SNLSRVRIPEPTNR--IFKQECCVSFDTPRSEGGLFVDLNSFLAYGKDHVGWNF------ 60
S +S + EPT I+ EC ++ E G+F+DL SF ++ + N+
Sbjct: 9 SLISTIVKDEPTKEEVIYLGECSITGHKDFFEDGIFIDLLSFESFSLKFLKCNYNRLSKL 68
Query: 61 --EKTGNPVYLHIKQTRKLVAPEDRPSKKPTLLAIGVEGGFDNNEA-EYDETHSIVILPE 117
E + YL+IK+ + L+ E+ K T L I EGGF+ N+ EY+ +S+ +
Sbjct: 69 SSEGKNHRFYLNIKKKKNLL--ENIEKKVITNLNINAEGGFNENKVYEYEWEYSVYDIET 126
Query: 118 --YVTLSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQQIDNGV 175
Y+ L +L E V+ I+ + +K+ + W D K+ S YA +L Q++ G+
Sbjct: 127 GLYIKLE----DLDESVQKICKGIINHKNEVKKDNINKWVNDIKE-SKYAKDLVQLE-GI 180
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGG--NNH---AVEHYKETG--YP 228
I CA C N+WLNL+DG I CGR+ ++ GG NN A++H+ E+G YP
Sbjct: 181 KIKNENIHCAVCKSTKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHFYESGKKYP 240
Query: 229 LAVKLGTITSDLEGADVFSYPED--DSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELD 286
L VK+GTIT D E ADVFSY +D DSV+DP + HL GI+ +L+KTE+TT E+E++
Sbjct: 241 LVVKIGTITKDGE-ADVFSYADDENDSVIDPYIGVHLKNLGINIMNLEKTEITTLEKEIE 299
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP- 345
+N N +++ I ++ +++ + G G VNLGN+CY+ + +QV+ S RY
Sbjct: 300 ENQNINFSSILDN--NIQTICQQGKIGFVNLGNTCYMNSALQVLLSIKDISYRYLNNISD 357
Query: 346 --LKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQE---------KXXXXXXXXXX 394
L ++ D DL +Q +KL + + Y ++ K
Sbjct: 358 FLLSLDYKKKTHD---DLFLQYSKLCYMIFEEDYITKKKQYVKKFKTQCKDRNVEINYDS 414
Query: 395 XXKQEG---IPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQV 436
E I P MF+ I F + QQD E+ + ++++
Sbjct: 415 DIDDENSVSINPSMFRNCINQKSNSFCNNNQQDIYEYLSYLINEL 459
Score = 145 (56.1 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 46/249 (18%), Positives = 106/249 (42%)
Query: 483 LDEATNKEELAAFQK--LKMERISEGKDVTN---EEIVRPRVPLEACLSTFSAPEELPDF 537
++ +N + +++FQ L ++ I + N E++ + L CL+ + + + ++
Sbjct: 527 IESESNNQSISSFQNNILSLD-IPLDSSLLNGDEEKLKNVNISLLDCLNNYIKKDNIDEY 585
Query: 538 YXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXXXXXXXXXXSHMR-- 595
Y FP YL +H+++F + W KK+ MR
Sbjct: 586 YCQKEKKKIHAQKYMKFKTFPPYLFIHLKRFYADENWSAKKINIEVKTDEQLNLEFMRVQ 645
Query: 596 -SKXXXXXXXXXXXXXXXDEV--QSNKPVAN-KDIVSQLVSMGFNHLHCEKAAVNTSNAG 651
+ D + + +K + + KD++ L+ GF +A
Sbjct: 646 PNSTDVLNGQKEQETSPGDSMLQKESKLLEDHKDVLDSLLDFGFEKDKAIEAIKKVKIKN 705
Query: 652 VEEAMNWLLSHMDDPDIDMPLSQETQCAAIDQSKVETLLSFGFSEEVARNALKASGGDIE 711
V ++++ D ++D ++ E + ++ + ++++++ G +EVA AL + +++
Sbjct: 706 VNNCISYIYGE-DTVELDDDVNCEKE--EVNSNNLDSIINLGVKKEVAMAALILNKNNLQ 762
Query: 712 KATDWIFNN 720
KA D+IF+N
Sbjct: 763 KAIDYIFSN 771
Score = 67 (28.6 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 452 FKFGIEERISCPSGKVAYNRRLDYILSLGIPLDEAT-NKEELAAFQKLKMERISEGKDVT 510
F F IE+RI S + + + ILSL IPLD + N +E +KLK IS D
Sbjct: 519 FTFEIEQRIESESNNQSISSFQNNILSLDIPLDSSLLNGDE----EKLKNVNISL-LDCL 573
Query: 511 NEEIVRPRVPLEAC 524
N I + + C
Sbjct: 574 NNYIKKDNIDEYYC 587
Score = 55 (24.4 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 11/53 (20%), Positives = 29/53 (54%)
Query: 613 DEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDD 665
D+V K N + + ++++G AA+ + +++A++++ S++DD
Sbjct: 723 DDVNCEKEEVNSNNLDSIINLGVKK-EVAMAALILNKNNLQKAIDYIFSNLDD 774
>UNIPROTKB|H7C5J3 [details] [associations]
symbol:USP13 "Ubiquitin carboxyl-terminal hydrolase 13"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394 Pfam:PF00443
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221 EMBL:AC007687
EMBL:AC125604 HGNC:HGNC:12611 ProteinModelPortal:H7C5J3
Ensembl:ENST00000497155 Bgee:H7C5J3 Uniprot:H7C5J3
Length = 299
Score = 494 (179.0 bits), Expect = 6.8e-47, P = 6.8e-47
Identities = 106/269 (39%), Positives = 147/269 (54%)
Query: 331 FSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVP-AQEKXXXXX 389
FS F Y P F+ +P DPT D N Q+TKL HGLLSG+YS P + +
Sbjct: 1 FSIPEFQRAYVGNLP--RIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQV 58
Query: 390 XXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPT 449
+Q GI PRMFKA ++ SHPEFSS RQQDA EFFLH V+ VER G +P+
Sbjct: 59 MKEEHKPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPS 116
Query: 450 KSFKFGIEERISC-PSGKVAYNRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKD 508
F+F +EERI C + KV Y R+DY++ L + ++ ATNK+EL A++ + E + +
Sbjct: 117 DVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRP 176
Query: 509 VTNEEIVRPRVPLEACLSTFSAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
+ E+VR ++P ACL FS PE + DF+ FP+YLV+ ++KF
Sbjct: 177 LP--ELVRAKIPFSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKF 234
Query: 569 VMEAGWVPKKLXXXXXXXXXXXXSHMRSK 597
WVPKK +H+R++
Sbjct: 235 TFGLDWVPKKFDVSIDMPDLLDINHLRAR 263
>SGD|S000000262 [details] [associations]
symbol:UBP14 "Ubiquitin-specific protease" species:4932
"Saccharomyces cerevisiae" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=TAS] [GO:0045721 "negative regulation of gluconeogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IC] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 SGD:S000000262
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0046872
GO:GO:0008270 EMBL:BK006936 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0045721
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 EMBL:Z46260 EMBL:Z35927 GeneTree:ENSGT00390000000874
KO:K11836 eggNOG:COG5207 HOGENOM:HOG000162311 OrthoDB:EOG470XRN
PIR:S45916 RefSeq:NP_009614.2 ProteinModelPortal:P38237 SMR:P38237
DIP:DIP-4897N IntAct:P38237 MINT:MINT-486523 STRING:P38237
MEROPS:C19.083 PaxDb:P38237 EnsemblFungi:YBR058C GeneID:852349
KEGG:sce:YBR058C CYGD:YBR058c OMA:AESAMNW NextBio:971095
Genevestigator:P38237 GermOnline:YBR058C Uniprot:P38237
Length = 781
Score = 252 (93.8 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 94/345 (27%), Positives = 152/345 (44%)
Query: 11 LSRVRIPEPTNRIFKQECCVSFDTPRSEG---------GLFVDLNSFLAYGKDHVGWNFE 61
L V +P + K EC F++P +E L + LN F A HV +
Sbjct: 6 LENVNVPAVVS---KDECIYCFESPYNEPLALNASPKHSLNICLNCFQATCNRHVPLHIR 62
Query: 62 KTG------NPVYLHIKQTRKLV---APEDRPSKKPTLLAIGVEGGFDNNEAEYDETHSI 112
T + YL I + K E+ +KK L I +N + +
Sbjct: 63 VTEYACDTIHSNYLTIAKVEKPKQENVEENNNNKKIKLQVIETSEDDTHNTIWSLQRFNG 122
Query: 113 VILPEYVTLSYPSVELPEKVRLAVDAILMAEGAERKEQVAAWTADKKQTSAYAMNLQ--- 169
+P V ++ ++ IL A+ + +++ +W + T + N Q
Sbjct: 123 ENVPRTVLSKSTDSDISSTALEKIEKILKAKSQDFEDKKNSWVLEIS-TCPHTENFQIPS 181
Query: 170 QIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETG-YP 228
+ +N V + +C+ CD NLWL L G I CGR G G++HA++HY+ +P
Sbjct: 182 KPENTVNLN----QCSSCDLTQNLWLCLHCGNIGCGREQI-GIDGHSHALDHYRSNNNHP 236
Query: 229 LAVKLGTITSDLEGADVFSYPEDDSVVDP---LLAQHLAFFGIDFSSLQKTEMTTAEREL 285
LA+KLG+++S D++ Y DD P L L +GI+ E T + ++
Sbjct: 237 LAIKLGSLSSSTY--DLYCYACDDETRFPDNVNLGSALQIYGINIQEKIADEKTLVQLQV 294
Query: 286 DQNTNFDWNRIQESGQDVEPLFGP-GY-TGLVNLGNSCYLAATMQ 328
+QN N+ + + SG++ E L Y GL+NLGNSCYL + +Q
Sbjct: 295 EQNENWQFRMVDSSGKEFEKLSASKNYGCGLINLGNSCYLNSVIQ 339
Score = 195 (73.7 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 41/113 (36%), Positives = 62/113 (54%)
Query: 613 DEVQSNKPVANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
DE +S+ N+ +SQL+ MGF +A NT N E AMNWL HMDDPD++ P
Sbjct: 578 DENRSSF-TPNQCSISQLIEMGFTQNASVRALFNTGNQDAESAMNWLFQHMDDPDLNDPF 636
Query: 673 SQETQCAAIDQSKVE-----TLLSFGFSEEVARNALKASGGDIEKATDWIFNN 720
D+ +V+ ++LS G + + R AL + GD+ ++ +W+FNN
Sbjct: 637 VPPPNVPKKDKREVDEVSLTSMLSMGLNPNLCRKALILNNGDVNRSVEWVFNN 689
Score = 133 (51.9 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 38/106 (35%), Positives = 57/106 (53%)
Query: 400 GIPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVH-----SGKPEVDPTKSFKF 454
GI P FK I +H EFSS RQQDA+EF +D +++ SG P +P +F
Sbjct: 390 GIKPTTFKKCIGQNHQEFSSNRQQDAMEFLTFLLDLLDKKFFSSSSSGIP--NPNDLVRF 447
Query: 455 GIEERISCP-SGKVAYNRRLDYILSLGIPLDEATNKEELAAFQKLK 499
+E+R+ C GKV Y+ + ++ IPL+E N E +++K
Sbjct: 448 MMEDRLQCNICGKVKYS--YEPTEAIQIPLEE--NDEPQDMLERIK 489
Score = 77 (32.2 bits), Expect = 5.1e-30, Sum P(3) = 5.1e-30
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDD----PDIDMPLSQETQ 677
++ ++SMG N C KA + +N V ++ W+ ++MDD P+ ++P ++ Q
Sbjct: 655 LTSMLSMGLNPNLCRKALI-LNNGDVNRSVEWVFNNMDDDGTFPEPEVPNEEQQQ 708
>UNIPROTKB|F1SGC5 [details] [associations]
symbol:USP13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR000449 InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
PROSITE:PS00973 PROSITE:PS50235 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00390000000874 EMBL:CU695053 EMBL:CU861911
Ensembl:ENSSSCT00000012876 OMA:RESNANR Uniprot:F1SGC5
Length = 436
Score = 442 (160.7 bits), Expect = 4.5e-41, P = 4.5e-41
Identities = 101/281 (35%), Positives = 145/281 (51%)
Query: 405 MFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSFKFGIEERISC-P 463
MFKA ++ SHPEFSS RQQDA EFFLH V+ VER G +P+ F+F +EERI C
Sbjct: 1 MFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSE--NPSDVFRFLVEERIQCCQ 58
Query: 464 SGKVAYNRRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEA 523
+ KV Y R+DY++ L + ++ ATNK+EL A++ + E + + + E+VR ++P A
Sbjct: 59 TRKVRYMERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLP--ELVRAKIPFSA 116
Query: 524 CLSTFSAPEELPDFYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKFVMEAGWVPKKLXXXX 583
CL FS PE + DF+ FP+YLV+ ++KF WVPKK
Sbjct: 117 CLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSI 176
Query: 584 XXXXXXXXSHMRSKXXXXXXXXXXXXX----XXDEVQS---NKPVANKDI----VSQLVS 632
+H+R++ D+ + N+ + +I V QL
Sbjct: 177 DMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSEIDESSVMQLAE 236
Query: 633 MGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
MGF C KA T N G E A NW++ HM++PD PL+
Sbjct: 237 MGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLT 277
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 627 VSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLSQETQCAA------ 680
V QL MGF C KA T N G E A NW++ HM++PD PL+ A
Sbjct: 231 VMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGAS 290
Query: 681 ------IDQSKVETLL----SFGFSEEVARNALKASGGDIEKATDWIFNNP 721
+D E ++ S GF A AL+A+ ++E+A DWIF++P
Sbjct: 291 VFGATGLDNQPPEEIVAIITSMGFHRNQAVQALRATNSNLERALDWIFSHP 341
>ZFIN|ZDB-GENE-050227-1 [details] [associations]
symbol:fbxl22 "F-box and leucine-rich repeat protein
22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
Length = 527
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 96/428 (22%), Positives = 158/428 (36%)
Query: 166 MNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKET 225
++L + NG PS W C+ C + W+ LT + CGR N HA +H++E
Sbjct: 14 VDLTRFPNG---SPSSWCCSVCRSNKSPWVCLTCMNVHCGRYV------NGHAKKHFEEI 64
Query: 226 GYPLAV-------KL---G---TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSS 272
P KL G ++ D F Y D+ VV+ H+ S
Sbjct: 65 EAPGCSQRKPDREKLREKGQQHSVCMDCNSYSTFCYKCDEFVVNDTKLGHVQRVREHLQS 124
Query: 273 LQKTEMTTAERELDQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFS 332
L+ + T +R+ + + ++ + QD E TGL NLGN+C++ A +Q + +
Sbjct: 125 LENSVCNT-DRQRKRKMSESFSPDSKMKQDSEGALVQCATGLRNLGNTCFMNAILQSLSN 183
Query: 333 THAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXX 392
F Y+ + P A A ++ H G SV E+
Sbjct: 184 IQVFSC-YFKELPSVALRSGKTAG---------RRMYHTRSQGDSSVSLVEEFRKTLCSL 233
Query: 393 XXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHFVDQVERVHSGKPEVDPTKSF 452
+ P +F VI P F +QQDA EF + +D + R G P+
Sbjct: 234 WQGSQTAFSPDALFY-VIWKIMPSFRGYQQQDAHEFLRYLLDHLHREMQGNKNGSPSPPV 292
Query: 453 KFGIEERISCPSGKVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERIS 504
+E K N + S+ G+ +E T + F L ++ +
Sbjct: 293 TS--DEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPN 350
Query: 505 EGK-DVTNEEIVRPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDY 560
+ + T ++ P L CL +F+ EEL + + P
Sbjct: 351 QFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKV 410
Query: 561 LVLHMRKF 568
L LH+++F
Sbjct: 411 LCLHLKRF 418
>RGD|1308852 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
"Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
evidence=ISO] [GO:0031647 "regulation of protein stability"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
Genevestigator:Q4JL29 Uniprot:Q4JL29
Length = 520
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 94/416 (22%), Positives = 154/416 (37%)
Query: 179 PSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPL-----AVKL 233
PS W C+ C + W+ LT +LCGR N HA +HY++ PL + K
Sbjct: 24 PSSWCCSVCRSNKSPWVCLTCSSVLCGRYV------NGHAKKHYEDAQIPLLNHKRSEKQ 77
Query: 234 G----TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELD 286
T+ D + Y DD VV+ + SL+ + T +R+L
Sbjct: 78 EKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQSLENSAFTADRHRKRKLL 137
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPL 346
+N++ + ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 138 ENSSLNSKLLKVNGSTAAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPA 192
Query: 347 KAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMF 406
A + H G +V E+ + P +F
Sbjct: 193 VELRNGKTAG---------RRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLF 243
Query: 407 KAVIAASHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSG 465
V+ P F RQQDA EF + +D + + G V + + E +
Sbjct: 244 Y-VVWKIMPNFRGYRQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSANN 299
Query: 466 KVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIV 515
K N + ++ GI +E T + F L ++ S+ K N+E
Sbjct: 300 KCCINGASTVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQEN- 358
Query: 516 RPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
P L CL +F+ EEL + + P L LH+++F
Sbjct: 359 GPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRF 414
>UNIPROTKB|F1P4C5 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
regulation of mitotic anaphase-promoting complex activity"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
Length = 717
Score = 107 (42.7 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
I+ P W C C+ +++W L+ + CGR HA++H++E G+P+A+++
Sbjct: 21 ILNPQKWHCVDCNTTESVWACLSCSHVACGRYI------EEHALKHFQENGHPVALEVNE 74
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSL--QKTEMTT 280
+ VF Y DD V++ + S++ QK E TT
Sbjct: 75 LY-------VFCYLCDDYVLNDNATGDIKLLRSTLSAIKSQKYECTT 114
Score = 94 (38.1 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 271 SSLQKTEMTTAE-RELDQNTNFDWNRIQESGQDV---EPLFGPGYTGLVNLGNSCYLAAT 326
S QKT +T EL + D R+++ G P PG TGL NLGN+CY+ +
Sbjct: 230 SVTQKTSQSTESVSELKETYTSDEVRLKKIGDSPIKRRPTVTPGVTGLRNLGNTCYMNSI 289
Query: 327 MQVM 330
+QV+
Sbjct: 290 LQVL 293
Score = 52 (23.4 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF +D+V++
Sbjct: 419 PAFRGYAQQDAQEFLCELLDKVQQ 442
>ZFIN|ZDB-GENE-040426-774 [details] [associations]
symbol:usp44 "ubiquitin specific peptidase 44"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
spindle checkpoint" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
Length = 695
Score = 107 (42.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 30/131 (22%), Positives = 63/131 (48%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
I+ P W C C+ +++W L+ + CGR HA++H+KE +PLA+++
Sbjct: 18 ILNPQKWHCVDCNTTESVWACLSCSHVACGRYI------EEHALQHFKEQHHPLALEVNE 71
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKT--EMTTAERELDQNTNFDW 293
+ V+ Y DD V++ L S+++ E+TT ++++ +
Sbjct: 72 LY-------VYCYLCDDYVLNDNATGDLKLLRSTLSAIKSQCYEVTTRSGRTLRSSSANG 124
Query: 294 NRIQESGQDVE 304
+++ S Q+++
Sbjct: 125 DQLSPSTQELQ 135
Score = 91 (37.1 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFE--AAPADPTVDLN 362
P PG TGL NLGN+CY+ + +QV+ H F + + L A E A+ + L+
Sbjct: 288 PTVTPGVTGLRNLGNTCYMNSILQVLSHLHVF-RECFLRLDLNQALELLASAVSRKLGLS 346
Query: 363 MQLTKLAHGLLSG 375
Q GL G
Sbjct: 347 AQRVIQPKGLNQG 359
Score = 53 (23.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D+V ER + P P + I++ +S + + +
Sbjct: 420 PAFRGYAQQDAQEFLCELLDKVQHELERTRTLTPATVPANQRRL-IKQVLSVVN-TIFHG 477
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKMERISEGKDVTNEEIVRPRVPLEACLSTFSA 530
+ L + L D +N E F L +E E +++ + L L+ F+
Sbjct: 478 QLLSQVRCLAC--DHRSNTIE--PFWDLSLE-FPERYHSNSKDAAQVPCGLTEMLAKFTE 532
Query: 531 PEEL 534
E L
Sbjct: 533 TEAL 536
>UNIPROTKB|F8VRI7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
Uniprot:F8VRI7
Length = 496
Score = 95 (38.5 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 161 TSAYAMNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVE 220
T + LQ + + P W C C+ +++W L+ + CGR HA++
Sbjct: 6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYI------EEHALK 59
Query: 221 HYKETGYPLAVKLGTITSDLEGADVFSYPEDDSVVD 256
H++E+ +P+A+++ + VF Y DD V++
Sbjct: 60 HFQESSHPVALEVNEMY-------VFCYLCDDYVLN 88
Score = 93 (37.8 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 278 MTTAERELDQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVM 330
++T+E E+ Q ++ +S P+ PG TGL NLGN+CY+ + +QV+
Sbjct: 246 LSTSENEISQ-------KVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVL 291
Score = 55 (24.4 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF +D+++R
Sbjct: 414 PAFRGYAQQDAQEFLCELLDKIQR 437
>UNIPROTKB|E2QZQ0 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
NextBio:20861160 Uniprot:E2QZQ0
Length = 520
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 92/416 (22%), Positives = 153/416 (36%)
Query: 179 PSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPL-----AVKL 233
PS W C+ C + W+ LT + CGR N HA +HY++ PL + K
Sbjct: 24 PSSWCCSVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQVPLTNHKKSEKQ 77
Query: 234 G----TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELD 286
T+ D + Y DD VV+ + +L+ + T +R+L
Sbjct: 78 DKPQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLL 137
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPL 346
+N++ + ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 138 ENSSLNSKLLKVNGSTAAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPA 192
Query: 347 KAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMF 406
A + H G +V E+ + P +F
Sbjct: 193 VELRNGKTAG---------RRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLF 243
Query: 407 KAVIAASHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSG 465
V+ P F +QQDA EF + +D + + G V + + E S
Sbjct: 244 Y-VVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSASN 299
Query: 466 KVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIV 515
K N + ++ GI +E T + F L ++ S+ K N+E
Sbjct: 300 KCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQEN- 358
Query: 516 RPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
P L CL +F+ EEL + + P L LH+++F
Sbjct: 359 GPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 414
>UNIPROTKB|Q9H0E7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IMP] [GO:0090231 "regulation of spindle
checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0090266 "regulation of mitotic cell cycle spindle assembly
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
Ensembl:ENST00000258499 Ensembl:ENST00000393091
Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
Uniprot:Q9H0E7
Length = 712
Score = 95 (38.5 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 161 TSAYAMNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVE 220
T + LQ + + P W C C+ +++W L+ + CGR HA++
Sbjct: 6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYI------EEHALK 59
Query: 221 HYKETGYPLAVKLGTITSDLEGADVFSYPEDDSVVD 256
H++E+ +P+A+++ + VF Y DD V++
Sbjct: 60 HFQESSHPVALEVNEMY-------VFCYLCDDYVLN 88
Score = 93 (37.8 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 278 MTTAERELDQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVM 330
++T+E E+ Q ++ +S P+ PG TGL NLGN+CY+ + +QV+
Sbjct: 246 LSTSENEISQ-------KVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVL 291
Score = 60 (26.2 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER----VHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D+++R + P + PT K I++ ++ + + +
Sbjct: 414 PAFRGYAQQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKL-IKQVLNVVNN-IFHG 471
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKME---RIS-EGKDVTNE 512
+ L + L D +N E F L +E R GKD+ ++
Sbjct: 472 QLLSQVTCLAC--DNKSNTIE--PFWDLSLEFPERYQCSGKDIASQ 513
>UNIPROTKB|Q9Y6I4 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
[GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
"regulation of protein stability" evidence=IDA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
"ubiquitin-specific protease activity" evidence=TAS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
Length = 520
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 92/416 (22%), Positives = 152/416 (36%)
Query: 179 PSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV------- 231
PS W C+ C + W+ LT + CGR N HA +HY++ PL
Sbjct: 24 PSSWCCSVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQVPLTNHKKSEKQ 77
Query: 232 -KLG-TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELD 286
K+ T+ D + Y DD VV+ + +L+ + T +R+L
Sbjct: 78 DKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLL 137
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPL 346
+N+ + ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 138 ENSTLNSKLLKVNGSTTAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPA 192
Query: 347 KAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMF 406
A + H G +V E+ + P +F
Sbjct: 193 VELRNGKTAG---------RRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLF 243
Query: 407 KAVIAASHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSG 465
V+ P F +QQDA EF + +D + + G V + + E S
Sbjct: 244 Y-VVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSASN 299
Query: 466 KVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIV 515
K N + ++ GI +E T + F L ++ S+ K N+E
Sbjct: 300 KCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQEN- 358
Query: 516 RPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
P L CL +F+ EEL + + P L LH+++F
Sbjct: 359 GPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 414
>MGI|MGI:2152450 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
"Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
Uniprot:Q91W36
Length = 520
Score = 150 (57.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 92/416 (22%), Positives = 153/416 (36%)
Query: 179 PSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPL-----AVKL 233
PS W C+ C + W+ LT + CGR N HA +HY++ PL + K
Sbjct: 24 PSSWCCSVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQIPLLNHKRSEKQ 77
Query: 234 G----TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELD 286
T+ D + Y DD VV+ + +L+ + T +R+L
Sbjct: 78 EKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLL 137
Query: 287 QNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPL 346
+N++ + ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 138 ENSSLNSKLLKVNGSTTAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPA 192
Query: 347 KAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMF 406
A + H G +V E+ + P +F
Sbjct: 193 VELRNGKTAG---------RRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLF 243
Query: 407 KAVIAASHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSG 465
V+ P F +QQDA EF + +D + + G V + + E S
Sbjct: 244 Y-VVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSASN 299
Query: 466 KVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIV 515
K N + ++ GI +E T + F L ++ S+ K N+E
Sbjct: 300 KCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQEN- 358
Query: 516 RPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
P L CL +F+ EEL + + P L LH+++F
Sbjct: 359 GPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRF 414
>UNIPROTKB|F1N0I6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
Length = 521
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 92/417 (22%), Positives = 153/417 (36%)
Query: 179 PSGWKC-AKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV-KLG-- 234
PS W C A C + W+ LT + CGR N HA +HY++ PL K
Sbjct: 24 PSSWCCSAVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQIPLTNHKKSEK 77
Query: 235 ------TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AEREL 285
T+ D + Y DD VV+ + +L+ + T +R+L
Sbjct: 78 QEKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKL 137
Query: 286 DQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP 345
+N++ + ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 138 LENSSLNSKLLKVNGSTTAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELP 192
Query: 346 LKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRM 405
A + H G+ +V E+ + P +
Sbjct: 193 AVELRNGKTAG---------RRTYHTRSQGENNVSLVEEFRKTLCALWQGSQTAFSPESL 243
Query: 406 FKAVIAASHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPS 464
F V+ P F +QQDA EF + +D + + G + + + E S
Sbjct: 244 FY-VVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQ---ENSTLSAS 299
Query: 465 GKVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEI 514
K N + ++ GI +E T + F L ++ S+ K N+E
Sbjct: 300 NKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQEN 359
Query: 515 VRPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
P L CL +F+ EEL + + P L LH+++F
Sbjct: 360 -GPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 415
>UNIPROTKB|E2RP15 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
Length = 681
Score = 103 (41.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCRECATTESVWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 93 (37.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVMFSTHAF--CTRYYTQEPLKAAFEAAP 354
P PG TGL NLGN+CY+ + +QV+ F C Y + F AP
Sbjct: 240 PAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLYLDPSQTQQLFPKAP 291
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 383 PAFRGYDQQDAQEFLCELLHKVQQ 406
>UNIPROTKB|Q5T3E1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
Length = 585
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCLECATTESVWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 90 (36.7 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLK 347
+P PG TGL NLGN+CY+ + +QV+ F + +P K
Sbjct: 245 QPAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSK 288
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 390 PAFRGYDQQDAQEFLCELLHKVQQ 413
>UNIPROTKB|E2R0T7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 EMBL:AAEX03009951
Ensembl:ENSCAFT00000010306 Uniprot:E2R0T7
Length = 668
Score = 99 (39.9 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 LQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGY 227
LQ + I+ P W C C+ +++W L+ + CGR HA++H++E+ +
Sbjct: 13 LQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYI------EEHALKHFQESSH 66
Query: 228 PLAVKLGTITSDLEGADVFSYPEDDSVVD 256
P+A+++ + VF Y DD V++
Sbjct: 67 PVALEVNEMY-------VFCYLCDDYVLN 88
Score = 87 (35.7 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 268 IDFSSLQKTEMTTAERELDQ--NTNFD--WNRIQESGQDVEPLFGPGYTGLVNLGNSCYL 323
++ +Q + T A D+ +T+ D + +S P+ PG TGL NLGN+CY+
Sbjct: 224 VEIVPVQVPQQTPASPAKDKVVSTSEDVRLKKASDSSGKRRPIVTPGVTGLRNLGNTCYM 283
Query: 324 AATMQVM 330
+ +QV+
Sbjct: 284 NSVLQVL 290
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D++ E + P + PT K I++ ++ + + +
Sbjct: 413 PAFRGYAQQDAQEFLCELLDKIQHELETTGTRLPALIPTSQRKL-IKQVLNVVNN-IFHG 470
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKME---RIS-EGKDVTNE 512
+ L + L D +N E F L +E R GKD ++
Sbjct: 471 QLLSQVTCLAC--DNKSNTIE--PFWDLSLEFPERYQCSGKDTASQ 512
>UNIPROTKB|E2R0W7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
[GO:0060564 "negative regulation of mitotic anaphase-promoting
complex activity" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
Length = 711
Score = 99 (39.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 LQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGY 227
LQ + I+ P W C C+ +++W L+ + CGR HA++H++E+ +
Sbjct: 13 LQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYI------EEHALKHFQESSH 66
Query: 228 PLAVKLGTITSDLEGADVFSYPEDDSVVD 256
P+A+++ + VF Y DD V++
Sbjct: 67 PVALEVNEMY-------VFCYLCDDYVLN 88
Score = 87 (35.7 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 268 IDFSSLQKTEMTTAERELDQ--NTNFD--WNRIQESGQDVEPLFGPGYTGLVNLGNSCYL 323
++ +Q + T A D+ +T+ D + +S P+ PG TGL NLGN+CY+
Sbjct: 224 VEIVPVQVPQQTPASPAKDKVVSTSEDVRLKKASDSSGKRRPIVTPGVTGLRNLGNTCYM 283
Query: 324 AATMQVM 330
+ +QV+
Sbjct: 284 NSVLQVL 290
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D++ E + P + PT K I++ ++ + + +
Sbjct: 413 PAFRGYAQQDAQEFLCELLDKIQHELETTGTRLPALIPTSQRKL-IKQVLNVVNN-IFHG 470
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKME---RIS-EGKDVTNE 512
+ L + L D +N E F L +E R GKD ++
Sbjct: 471 QLLSQVTCLAC--DNKSNTIE--PFWDLSLEFPERYQCSGKDTASQ 512
>UNIPROTKB|Q70CQ1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
GermOnline:ENSG00000164663 Uniprot:Q70CQ1
Length = 688
Score = 103 (41.3 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCLECATTESVWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 90 (36.7 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLK 347
+P PG TGL NLGN+CY+ + +QV+ F + +P K
Sbjct: 245 QPAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSK 288
Score = 44 (20.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 390 PAFRGYDQQDAQEFLCELLHKVQQ 413
>UNIPROTKB|Q0V9G5 [details] [associations]
symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0090231 "regulation of spindle
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
Uniprot:Q0V9G5
Length = 652
Score = 95 (38.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
I+ P W C C+ +++W L+ + CGR HA+ H++++ +PLA+++
Sbjct: 18 ILNPQKWHCVDCNTTESVWACLSCSHVACGRYI------EEHALRHFQDSKHPLALEVNE 71
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSL--QKTEMTTAE-RELDQNTNFD 292
+ VF Y DD V++ L S++ Q + TT R L D
Sbjct: 72 LY-------VFCYLCDDYVLNDNTTGDLKLLRSTLSAIKSQNYDCTTRSGRTLRSMVTAD 124
Query: 293 WNRIQESG 300
+ I G
Sbjct: 125 DSFISHEG 132
Score = 89 (36.4 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAF 336
+P PG TGL NLGN+CY+ + +Q++ H F
Sbjct: 266 KPTVTPGVTGLRNLGNTCYMNSILQILSHLHVF 298
Score = 52 (23.4 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF +D+V++
Sbjct: 416 PAFRGYAQQDAQEFLCELLDKVQQ 439
>UNIPROTKB|F1RUW2 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
Length = 682
Score = 103 (41.3 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCRECATTESVWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 88 (36.0 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLK 347
P PG TGL NLGN+CY+ + +QV+ F + +P K
Sbjct: 240 PAMAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLNLDPSK 282
Score = 44 (20.5 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 384 PAFRGYDQQDAQEFLCELLHKVQQ 407
>UNIPROTKB|D2HBJ8 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051322 "anaphase"
evidence=ISS] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISS] [GO:0090231
"regulation of spindle checkpoint" evidence=ISS] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
Length = 711
Score = 96 (38.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
I+ P W C C+ +++W L+ + CGR HA++H++E+ +P+A+++
Sbjct: 21 ILNPQKWHCVDCNTTESIWACLSCSHVACGRYI------EEHALKHFQESSHPVALEVNE 74
Query: 236 ITSDLEGADVFSYPEDDSVVD 256
+ VF Y DD V++
Sbjct: 75 MY-------VFCYLCDDYVLN 88
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 273 LQKTEMTTAERELDQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVM 330
LQ ++ + + + + +S P+ PG TGL NLGN+CY+ + +QV+
Sbjct: 233 LQTPASPAKDKVVSTSEDVRLKKASDSSGKRRPIVTPGVTGLRNLGNTCYMNSVLQVL 290
Score = 55 (24.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D++ E + P + PT K I++ ++ + + +
Sbjct: 413 PAFRGYAQQDAQEFLCELLDKIQHELETTGTRLPALIPTSQRKL-IKQVLNVVNN-IFHG 470
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKME---RIS-EGKDVTNE 512
+ L + L D +N E F L +E R GKD+ ++
Sbjct: 471 QLLSQVTCLAC--DNKSNTIE--PFWDLSLEFPERYQCNGKDIASQ 512
>UNIPROTKB|I3LRM6 [details] [associations]
symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
Length = 628
Score = 103 (41.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCRECATTESVWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 88 (36.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLK 347
P PG TGL NLGN+CY+ + +QV+ F + +P K
Sbjct: 235 PAMAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLNLDPSK 277
>UNIPROTKB|E1BLZ0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
Length = 709
Score = 94 (38.1 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 155 TADKKQTSAYAMNLQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGG 214
T DK Q + L+ + I+ P W C C+ +++W L+ + CGR
Sbjct: 3 TMDKCQ---HIGQLRLAQDHPILNPQKWHCVDCNTTESIWACLSCSHVACGRYI------ 53
Query: 215 NNHAVEHYKETGYPLAVKLGTITSDLEGADVFSYPEDDSVVD 256
HA+ H++E+ +P+A+++ + VF Y DD V++
Sbjct: 54 EEHALGHFQESSHPVALEVNEMY-------VFCYLCDDYVLN 88
Score = 89 (36.4 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 243 ADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQD 302
A++ S P S+ LAQ + LQ + + ++ + + + + +S
Sbjct: 202 AELESMPPRKSLRLQALAQSTTVEIVPVQ-LQTSALPAKDKVVSTSEDVRLKKASDSSVK 260
Query: 303 VEPLFGPGYTGLVNLGNSCYLAATMQVM 330
P PG TGL NLGN+CY+ + +QV+
Sbjct: 261 QRPTVTPGVTGLRNLGNTCYMNSVLQVL 288
Score = 51 (23.0 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFK 453
P F QQDA EF +D++ E + P + PT K
Sbjct: 411 PAFRGYGQQDAQEFLCELLDKIQHELETTGTRSPALIPTSQRK 453
>UNIPROTKB|I3LA47 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
KEGG:ssc:100516911 Uniprot:I3LA47
Length = 709
Score = 95 (38.5 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 168 LQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGY 227
LQ + I+ P W C C+ +++W L+ + CGR HA++H++E+ +
Sbjct: 13 LQLAHDHSILNPQKWHCVDCNTTESIWACLSCPHVACGRYI------EEHALKHFQESSH 66
Query: 228 PLAVKLGTITSDLEGADVFSYPEDDSVVD 256
P+A+++ + VF Y DD V++
Sbjct: 67 PVALEVNEMY-------VFCYFCDDYVLN 88
Score = 83 (34.3 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVM 330
P+ PG TGL NLGN+CY+ + +QV+
Sbjct: 263 PIVTPGVTGLRNLGNTCYMNSVLQVL 288
Score = 55 (24.4 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 415 PEFSSMRQQDALEFFLHFVDQV----ERVHSGKPEVDPTKSFKFGIEERISCPSGKVAYN 470
P F QQDA EF +D++ E + P + PT K I++ ++ + + +
Sbjct: 411 PAFRGYAQQDAQEFLCELLDKIQHELETTGTRLPALIPTSQRKL-IKQVLNVVNN-IFHG 468
Query: 471 RRLDYILSLGIPLDEATNKEELAAFQKLKME---RIS-EGKDVTNE 512
+ L + L D +N E F L +E R GKD+ ++
Sbjct: 469 QLLSQVTCLAC--DNKSNTIE--PFWDLSLEFPERYQCSGKDIASQ 510
>MGI|MGI:2685391 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
Length = 685
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C ++ W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCLQCATTESAWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 304 EPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP 345
+P PG TGL NLGN+CY+ + +QV+ F + +P
Sbjct: 242 QPAVAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDP 283
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 387 PAFRGYDQQDAQEFLCELLHKVQQ 410
>RGD|1308216 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
Length = 481
Score = 86 (35.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 168 LQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGY 227
LQ I+ P W C C+ +++W L+ + CG+ + HA++H++E+ +
Sbjct: 10 LQLAQGHSILNPQKWFCMVCNTTESIWACLSCSHVACGQYIQE------HALKHFEESSH 63
Query: 228 PLAVKL 233
P+A ++
Sbjct: 64 PVAFEV 69
Score = 83 (34.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 295 RIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVM 330
R+ +S P PG TGL NLGN+CY+ + +QV+
Sbjct: 254 RVSDSLIKRRPAVTPGVTGLRNLGNTCYMNSVLQVL 289
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF +D+++R
Sbjct: 415 PAFRGYAQQDAQEFLCELLDKIQR 438
>UNIPROTKB|I3LUD5 [details] [associations]
symbol:UBXN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071796 "K6-linked polyubiquitin binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA] [GO:0032435
"negative regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000449 InterPro:IPR001012
InterPro:IPR009060 Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033
SMART:SM00166 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0000502 GO:GO:0031397 SUPFAM:SSF46934 GO:GO:0032435
GO:GO:0034098 GeneTree:ENSGT00530000063500 OMA:MTTFPRK
EMBL:FP312617 Ensembl:ENSSSCT00000029345 Uniprot:I3LUD5
Length = 297
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL+
Sbjct: 1 MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLA 53
>UNIPROTKB|E1BGQ9 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
NextBio:20872416 Uniprot:E1BGQ9
Length = 683
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C +++W L + CGR D HA++H++ET +PLA+++
Sbjct: 18 ILNPQKWYCRECATTESVWACLKCSHVACGRYIED------HALKHFEETRHPLAMEV 69
Score = 88 (36.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 305 PLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLK 347
P PG TGL NLGN+CY+ + +QV+ F + +P K
Sbjct: 240 PAMAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLNLDPSK 282
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 385 PAFRGYDQQDAQEFLCELLHKVQQ 408
>ZFIN|ZDB-GENE-030131-792 [details] [associations]
symbol:ubxn1 "UBX domain protein 1" species:7955
"Danio rerio" [GO:0031397 "negative regulation of protein
ubiquitination" evidence=ISS] [GO:0071796 "K6-linked polyubiquitin
binding" evidence=ISS] [GO:0032435 "negative regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
ZFIN:ZDB-GENE-030131-792 GO:GO:0005737 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0031397 SUPFAM:SSF46934
GO:GO:0032435 HSSP:Q922Y1 eggNOG:COG5207 CTD:51035
HOGENOM:HOG000188321 HOVERGEN:HBG082310 OrthoDB:EOG4W9J4X
GO:GO:0071796 EMBL:BC067166 IPI:IPI00506637 RefSeq:NP_997772.1
UniGene:Dr.77070 ProteinModelPortal:Q6NXA9 SMR:Q6NXA9 STRING:Q6NXA9
PRIDE:Q6NXA9 GeneID:322073 KEGG:dre:322073 InParanoid:Q6NXA9
NextBio:20807656 ArrayExpress:Q6NXA9 Uniprot:Q6NXA9
Length = 294
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDID---MPLSQETQ 677
+A+ + L+ MGF EKA +T N G+E AM+WL+ H +DPDID +P + T
Sbjct: 1 MADCTTLDSLLEMGFGRNRAEKAVAHTGNQGIERAMDWLMEHENDPDIDEPYVPPAGNTL 60
Query: 678 CAAIDQSKVETLLSFGFSEEVARNA 702
A +QS+ T + + NA
Sbjct: 61 GPAEEQSQSPTEIPESIEDTEEGNA 85
>MGI|MGI:3045318 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
evidence=ISO] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISO] [GO:0090231
"regulation of spindle checkpoint" evidence=ISO] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
Genevestigator:Q8C2S0 Uniprot:Q8C2S0
Length = 711
Score = 89 (36.4 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 168 LQQIDNGVIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGY 227
LQ I+ P W C C+ +++W L+ + CG+ + HA++H++E+ +
Sbjct: 10 LQLAQGHSILDPQKWYCMVCNTTESIWACLSCSHVACGKYIQE------HALKHFQESSH 63
Query: 228 PLAVKL 233
P+A ++
Sbjct: 64 PVAFEV 69
Score = 84 (34.6 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 293 WNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVM 330
+ ++ +S P+ PG TGL NLGN+CY+ + +QV+
Sbjct: 253 FKKVSDSLIKRRPMVTPGVTGLRNLGNTCYMNSVLQVL 290
Score = 55 (24.4 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF +D+++R
Sbjct: 413 PAFRGYAQQDAQEFLCELLDKIQR 436
>UNIPROTKB|Q32KW2 [details] [associations]
symbol:UBXN1 "UBX domain-containing protein 1" species:9913
"Bos taurus" [GO:0071796 "K6-linked polyubiquitin binding"
evidence=ISS] [GO:0031397 "negative regulation of protein
ubiquitination" evidence=ISS] [GO:0032435 "negative regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0051117 "ATPase binding" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000449
InterPro:IPR001012 InterPro:IPR009060 Pfam:PF00627 Pfam:PF00789
PROSITE:PS50033 SMART:SM00166 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 GO:GO:0000502 GO:GO:0031397 SUPFAM:SSF46934
GO:GO:0032435 GO:GO:0034098 HSSP:O75500 eggNOG:COG5207
EMBL:BC109898 IPI:IPI00711354 RefSeq:NP_001032677.1 UniGene:Bt.8001
ProteinModelPortal:Q32KW2 SMR:Q32KW2 STRING:Q32KW2 PRIDE:Q32KW2
Ensembl:ENSBTAT00000013845 GeneID:506676 KEGG:bta:506676 CTD:51035
GeneTree:ENSGT00530000063500 HOGENOM:HOG000188321
HOVERGEN:HBG082310 InParanoid:Q32KW2 OMA:MTTFPRK OrthoDB:EOG4W9J4X
NextBio:20867711 GO:GO:0071796 Uniprot:Q32KW2
Length = 297
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPLS 673
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL+
Sbjct: 1 MAELTALESLIEMGFPKGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLA 53
>UNIPROTKB|Q04323 [details] [associations]
symbol:UBXN1 "UBX domain-containing protein 1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0031593 "polyubiquitin
binding" evidence=IDA] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0032435 "negative regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0071796 "K6-linked polyubiquitin binding"
evidence=IDA] [GO:0031397 "negative regulation of protein
ubiquitination" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IDA]
InterPro:IPR000449 InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
GO:GO:0005634 GO:GO:0043161 GO:GO:0043025 GO:GO:0030425
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0031397
GO:GO:0031625 SUPFAM:SSF46934 GO:GO:0032435 GO:GO:0034098
eggNOG:COG5207 CTD:51035 HOGENOM:HOG000188321 HOVERGEN:HBG082310
OMA:MTTFPRK OrthoDB:EOG4W9J4X GO:GO:0071796 EMBL:M68864
EMBL:BC000902 EMBL:BC001372 EMBL:BC040129 IPI:IPI00027378
IPI:IPI00396563 PIR:S27965 RefSeq:NP_056937.2 UniGene:Hs.351296
ProteinModelPortal:Q04323 SMR:Q04323 DIP:DIP-29467N IntAct:Q04323
STRING:Q04323 PhosphoSite:Q04323 DMDM:30923268 PaxDb:Q04323
PeptideAtlas:Q04323 PRIDE:Q04323 DNASU:51035
Ensembl:ENST00000294119 Ensembl:ENST00000301935 GeneID:51035
KEGG:hsa:51035 UCSC:uc001nuj.3 UCSC:uc001nul.2
GeneCards:GC11M062462 H-InvDB:HIX0009719 HGNC:HGNC:18402
HPA:HPA012669 neXtProt:NX_Q04323 PharmGKB:PA162408336 ChiTaRS:UBXN1
GenomeRNAi:51035 NextBio:53592 ArrayExpress:Q04323 Bgee:Q04323
CleanEx:HS_UBXN1 Genevestigator:Q04323 GermOnline:ENSG00000162191
Uniprot:Q04323
Length = 297
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL
Sbjct: 1 MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPL 52
>MGI|MGI:1289301 [details] [associations]
symbol:Ubxn1 "UBX domain protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
[GO:0031397 "negative regulation of protein ubiquitination"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032435 "negative regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0051117 "ATPase binding" evidence=ISO]
[GO:0071796 "K6-linked polyubiquitin binding" evidence=ISO]
InterPro:IPR000449 InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166
MGI:MGI:1289301 GO:GO:0005634 GO:GO:0043025 GO:GO:0030425
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0000502
GO:GO:0031397 SUPFAM:SSF46934 GO:GO:0032435 GO:GO:0034098
eggNOG:COG5207 CTD:51035 GeneTree:ENSGT00530000063500
HOGENOM:HOG000188321 HOVERGEN:HBG082310 OMA:MTTFPRK
OrthoDB:EOG4W9J4X GO:GO:0071796 EMBL:AK150442 EMBL:BC006701
IPI:IPI00123589 RefSeq:NP_666205.1 UniGene:Mm.27839 PDB:1WHC
PDBsum:1WHC ProteinModelPortal:Q922Y1 SMR:Q922Y1 IntAct:Q922Y1
MINT:MINT-1342018 STRING:Q922Y1 MEROPS:C19.089 PhosphoSite:Q922Y1
REPRODUCTION-2DPAGE:IPI00123589 REPRODUCTION-2DPAGE:Q922Y1
PaxDb:Q922Y1 PRIDE:Q922Y1 Ensembl:ENSMUST00000096255
Ensembl:ENSMUST00000166407 GeneID:225896 KEGG:mmu:225896
UCSC:uc008gnp.1 InParanoid:Q922Y1 EvolutionaryTrace:Q922Y1
NextBio:377861 Bgee:Q922Y1 Genevestigator:Q922Y1
GermOnline:ENSMUSG00000071655 Uniprot:Q922Y1
Length = 297
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL
Sbjct: 1 MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPL 52
>RGD|1309471 [details] [associations]
symbol:Ubxn1 "UBX domain protein 1" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=IEA;ISO;ISS] [GO:0031593
"polyubiquitin binding" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0032435 "negative
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO;ISS] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA
ATPase complex" evidence=IEA;ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=ISO]
[GO:0051117 "ATPase binding" evidence=IEA;ISO] [GO:0071796
"K6-linked polyubiquitin binding" evidence=IEA;ISO;ISS]
InterPro:IPR000449 InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166 RGD:1309471
GO:GO:0005634 GO:GO:0005737 GO:GO:0043025 GO:GO:0030425
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0000502
GO:GO:0031397 SUPFAM:SSF46934 GO:GO:0032435 GO:GO:0034098
eggNOG:COG5207 GeneTree:ENSGT00530000063500 HOGENOM:HOG000188321
HOVERGEN:HBG082310 OMA:MTTFPRK GO:GO:0071796 EMBL:AABR03002578
IPI:IPI00371410 UniGene:Rn.198539 ProteinModelPortal:Q499N6
SMR:Q499N6 STRING:Q499N6 PhosphoSite:Q499N6 PRIDE:Q499N6
Ensembl:ENSRNOT00000026651 UCSC:RGD:1309471 InParanoid:Q499N6
ArrayExpress:Q499N6 Genevestigator:Q499N6
GermOnline:ENSRNOG00000019666 Uniprot:Q499N6
Length = 297
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL
Sbjct: 1 MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPL 52
>UNIPROTKB|Q499N6 [details] [associations]
symbol:Ubxn1 "UBX domain-containing protein 1"
species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex"
evidence=IEA] [GO:0051117 "ATPase binding" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001012 InterPro:IPR009060
Pfam:PF00627 Pfam:PF00789 PROSITE:PS50033 SMART:SM00166 RGD:1309471
GO:GO:0005634 GO:GO:0005737 GO:GO:0043025 GO:GO:0030425
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0000502
GO:GO:0031397 SUPFAM:SSF46934 GO:GO:0032435 GO:GO:0034098
eggNOG:COG5207 GeneTree:ENSGT00530000063500 HOGENOM:HOG000188321
HOVERGEN:HBG082310 OMA:MTTFPRK GO:GO:0071796 EMBL:AABR03002578
IPI:IPI00371410 UniGene:Rn.198539 ProteinModelPortal:Q499N6
SMR:Q499N6 STRING:Q499N6 PhosphoSite:Q499N6 PRIDE:Q499N6
Ensembl:ENSRNOT00000026651 UCSC:RGD:1309471 InParanoid:Q499N6
ArrayExpress:Q499N6 Genevestigator:Q499N6
GermOnline:ENSRNOG00000019666 Uniprot:Q499N6
Length = 297
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 621 VANKDIVSQLVSMGFNHLHCEKAAVNTSNAGVEEAMNWLLSHMDDPDIDMPL 672
+A + L+ MGF EKA T N G+E AM+WL+ H DDPD+D PL
Sbjct: 1 MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPL 52
>UNIPROTKB|D4A4F5 [details] [associations]
symbol:D4A4F5 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016578 "histone
deubiquitination" evidence=IEA] [GO:0031647 "regulation of protein
stability" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 OMA:DCLRSFT
OrthoDB:EOG4G4GQC IPI:IPI00776807 Ensembl:ENSRNOT00000057742
ArrayExpress:D4A4F5 Uniprot:D4A4F5
Length = 521
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 179 PSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHA-VEH----YKETGYPLAVKL 233
PS W C+ C + W+ LT + CGR +G G N + V + YKE+ +
Sbjct: 24 PSSWCCSVCRSNKSPWVCLTCSSVHCGRYT-EGEGKNRYRNVSNSLCSYKESEKQEKAQ- 81
Query: 234 GTITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELDQNTN 290
T+ D + Y DD VV+ + +L+ + T +R+L +N++
Sbjct: 82 HTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSS 141
Query: 291 FDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP 345
+ ++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 142 LNSKLLKVNGSTAAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELP 191
>UNIPROTKB|F1NQJ6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
Length = 521
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 93/422 (22%), Positives = 158/422 (37%)
Query: 175 VIIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLA---- 230
V + PS + + C + W+ LT + CGR N HA +HY++ P+
Sbjct: 19 VNVLPSSFCNSVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQIPMTNHKK 72
Query: 231 ----VKLG-TITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AE 282
K+ T+ D + Y DD VV+ + +L+ + T+ +
Sbjct: 73 TEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRK 132
Query: 283 RELDQNTNFDWNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYT 342
R+L +N++ + ++ +G L TGL NLGN+C++ A +Q + + FC Y+
Sbjct: 133 RKLLENSSLNSKLLKVNGSTTA-LCA---TGLRNLGNTCFMNAILQSLSNIQQFCC-YFK 187
Query: 343 QEPLKAAFEAAPADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIP 402
+ P A + H G +V E+ + P
Sbjct: 188 ELPAVELRNGKTAG---------RRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSP 238
Query: 403 PRMFKAVIAASHPEFSSM--RQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEER 459
+F V+ P FSS +QQDA EF + +D + + G V + + E
Sbjct: 239 ESLFY-VVWKIMPNFSSRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQ---ENS 294
Query: 460 ISCPSGKVAYNRRLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDV 509
S K N + ++ GI +E T + F L ++ S+ K
Sbjct: 295 SLTASSKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRT 354
Query: 510 TNEEIVRPRVPLEACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMR 566
N+E P L CL +F+ EEL + + P L LH++
Sbjct: 355 KNQEN-GPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLK 413
Query: 567 KF 568
+F
Sbjct: 414 RF 415
>RGD|1310513 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
Length = 685
Score = 101 (40.6 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKL 233
I+ P W C +C ++ W L + CGR D HA++H++ETG+PLA+++
Sbjct: 18 ILNPQKWCCLECATTESAWACLKCSHVACGRYIED------HALKHFEETGHPLAMEV 69
Score = 79 (32.9 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 309 PGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEP 345
PG TGL NLGN+CY+ + +QV+ F + +P
Sbjct: 247 PGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDP 283
Score = 44 (20.5 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 415 PEFSSMRQQDALEFFLHFVDQVER 438
P F QQDA EF + +V++
Sbjct: 387 PAFRGYDQQDAQEFLCELLHKVQQ 410
>WB|WBGene00013506 [details] [associations]
symbol:usp-3 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
Uniprot:Q9GRV2
Length = 550
Score = 91 (37.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 47/207 (22%), Positives = 81/207 (39%)
Query: 313 GLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKLAHGL 372
G+ N+GN+C++ A +Q + S F R Y ++ E D N
Sbjct: 230 GMRNVGNTCFMNAVLQALASISEF--REYIMS--LSSLEDYIHDEKEPKN---------- 275
Query: 373 LSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASHPEFSSMRQQDALEFFLHF 432
G Y E ++ P +A I+ P F RQ D+ EF +F
Sbjct: 276 -GGNYCYLTDEYRKLLISQSARSFREPTAPNEFREAFISVC-PRFRGFRQHDSHEFMRYF 333
Query: 433 VDQVE------RVHSGKPEVDPT---KSFKFGIEERISCPSGKVAYNRRLDYI-LSLGIP 482
+D + R G P+ T K F+ ++ + C + + N+ +++ LSL IP
Sbjct: 334 MDSLHTEMRKCRKLPGMPDDKHTPISKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIP 393
Query: 483 LDEATNKEELAAFQK--LKMERISEGK 507
+K L+ K+E + +G+
Sbjct: 394 AQRNASKVRLSDCLSTFFKLEMLEKGE 420
Score = 88 (36.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 184 CAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGTITSDLEGA 243
C +CD + + LT G ILCGR + + HA+ H++ET +P+ + D
Sbjct: 53 CDECDNCNKSLMCLTCGRILCGRND------SGHALHHFEETSHPVVI-------DCISF 99
Query: 244 DVFSYPEDDSV 254
+++ Y DD V
Sbjct: 100 ELYCYSCDDEV 110
>UNIPROTKB|Q6JHV3 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
Length = 498
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 89/410 (21%), Positives = 148/410 (36%)
Query: 185 AKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV--------KLG-T 235
A C + W+ LT + CGR N HA +HY++ PL K+ T
Sbjct: 8 AVCRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQVPLTNHKKSEKQDKVQHT 61
Query: 236 ITSDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELDQNTNFD 292
+ D + Y DD VV+ + +L+ + T +R+L +N+ +
Sbjct: 62 VCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENSTLN 121
Query: 293 WNRIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEA 352
++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 122 SKLLKVNGSTTAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPAVELRNG 176
Query: 353 APADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAA 412
A + H G +V E+ + P +F V+
Sbjct: 177 KTAG---------RRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFY-VVWK 226
Query: 413 SHPEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNR 471
P F +QQDA EF + +D + + G V + + E S K N
Sbjct: 227 IMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSASNKCCING 283
Query: 472 RLDYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIVRPRVPL 521
+ ++ GI +E T + F L ++ S+ K N+E P L
Sbjct: 284 ASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQEN-GPVCSL 342
Query: 522 EACLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
CL +F+ EEL + + P L LH+++F
Sbjct: 343 RDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 392
>ZFIN|ZDB-GENE-050208-484 [details] [associations]
symbol:usp49 "ubiquitin specific peptidase 49"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
Uniprot:Q1MTK1
Length = 649
Score = 98 (39.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 176 IIPPSGWKCAKCDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAVKLGT 235
I+ P W+C CD +++W L + CGR H+ HY++T +PLA+
Sbjct: 18 ILNPQMWRCVDCDTTESVWACLKCTHVACGRYM------EEHSRSHYQQTQHPLAM---- 67
Query: 236 ITSDLEGADVFSYPEDDSVVD 256
D+ DVF + D V++
Sbjct: 68 ---DVRELDVFCFACGDYVLN 85
Score = 78 (32.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 43/171 (25%), Positives = 69/171 (40%)
Query: 309 PGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAPADPTVDLNMQLTKL 368
PG TGL NLGN+CY+ + +QV+ F + T + + A ++ + Q+ L
Sbjct: 262 PGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELLAKSN-----HPQVGAL 316
Query: 369 AHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRM---FKAV----------IAASH- 414
+ G G VP+ + +Q + + F+ + A H
Sbjct: 317 SAGGGGGGGGVPSSLQSAEQKEPRSSSRQQVSLCHELHTLFRVMWSGRWSLVSPFAMLHS 376
Query: 415 -----PEFSSMRQQDALEFFLHFVDQVERVHSGKPEVD-PTKSFKFGIEER 459
P F QQDA EF +D+V++ + E D P K F I +R
Sbjct: 377 VWNLIPAFRGYDQQDAQEFLCELLDKVQQ----ELESDAPRKHFLIPITQR 423
>UNIPROTKB|H0YMI4 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
Length = 503
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 88/408 (21%), Positives = 147/408 (36%)
Query: 187 CDKRDNLWLNLTDGMILCGRRNWDGTGGNNHAVEHYKETGYPLAV--------KLG-TIT 237
C + W+ LT + CGR N HA +HY++ PL K+ T+
Sbjct: 15 CRSNKSPWVCLTCSSVHCGRYV------NGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVC 68
Query: 238 SDLEGADVFSYPEDDSVVDPLLAQHLAFFGIDFSSLQKTEMTT---AERELDQNTNFDWN 294
D + Y DD VV+ + +L+ + T +R+L +N+ +
Sbjct: 69 MDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENSTLNSK 128
Query: 295 RIQESGQDVEPLFGPGYTGLVNLGNSCYLAATMQVMFSTHAFCTRYYTQEPLKAAFEAAP 354
++ +G TGL NLGN+C++ A +Q + + FC Y+ + P
Sbjct: 129 LLKVNGSTTAICA----TGLRNLGNTCFMNAILQSLSNIEQFCC-YFKELPAVELRNGKT 183
Query: 355 ADPTVDLNMQLTKLAHGLLSGKYSVPAQEKXXXXXXXXXXXXKQEGIPPRMFKAVIAASH 414
A + H G +V E+ + P +F V+
Sbjct: 184 AG---------RRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFY-VVWKIM 233
Query: 415 PEFSSMRQQDALEFFLHFVDQVE-RVHSGKPEVDPTKSFKFGIEERISCPSGKVAYNRRL 473
P F +QQDA EF + +D + + G V + + E S K N
Sbjct: 234 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ---ENSTLSASNKCCINGAS 290
Query: 474 DYILSL--GIPLDEA------TNKEELAAFQKLKMERISE--GKDVTNEEIVRPRVPLEA 523
+ ++ GI +E T + F L ++ S+ K N+E P L
Sbjct: 291 TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQEN-GPVCSLRD 349
Query: 524 CLSTFSAPEELPD---FYXXXXXXXXXXXXXXXXXXFPDYLVLHMRKF 568
CL +F+ EEL + + P L LH+++F
Sbjct: 350 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRF 397
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 812 739 0.00088 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 68
No. of states in DFA: 626 (67 KB)
Total size of DFA: 401 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.87u 0.08s 58.95t Elapsed: 00:00:03
Total cpu time: 58.89u 0.08s 58.97t Elapsed: 00:00:03
Start: Tue May 21 17:58:33 2013 End: Tue May 21 17:58:36 2013