Query 003536
Match_columns 812
No_of_seqs 170 out of 1331
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 17:46:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003536.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1586-1590//hhsearch_pdb/003536hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 1.0 1 1 397.1 29.6 300 503-812 1-333 (536)
2 2c4m_A Glycogen phosphorylase; 1.0 1 1 227.8 13.0 294 512-812 60-522 (796)
3 1l5w_A Maltodextrin phosphoryl 1.0 1 1 218.3 14.1 295 509-812 56-532 (796)
4 2gj4_A Glycogen phosphorylase, 1.0 1 1 214.9 8.2 284 525-812 120-556 (824)
5 2qzs_A Glycogen synthase; glyc 1.0 1 1 204.7 21.8 282 512-812 1-298 (485)
6 1rzu_A Glycogen synthase 1; gl 1.0 1 1 203.5 23.7 283 512-812 1-297 (485)
7 3nb0_A Glycogen [starch] synth 1.0 1 1 197.8 13.6 265 513-812 29-338 (725)
8 3fro_A GLGA glycogen synthase; 1.0 1 1 185.3 25.0 252 510-812 1-257 (439)
9 3s28_A Sucrose synthase 1; gly 1.0 1 1 164.2 10.6 272 492-812 263-578 (816)
10 2r60_A Glycosyl transferase, g 1.0 1 1 140.9 18.7 217 511-770 7-239 (499)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=397.09 Aligned_cols=300 Identities=31% Similarity=0.518 Sum_probs=237.8
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEE
Q ss_conf 05889999974999963128865679779999999999997899499990388854200113553113898641388414
Q 003536 503 LTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLF 582 (812)
Q Consensus 503 ~~~~~~~~~MKIL~ISaE~aPiaKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~ 582 (812)
|+...+...|||+|||+|++|++|+||||+||++|+++|+++||+|+||+|+|+++... . .........+.++..
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~----~-~~~~~~~~~~~~~~~ 75 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDA----W-DTSVVAEIKVADRYE 75 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTC----E-EEEEEEEEEETTEEE
T ss_pred CCCCCCCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH----C-CCCEEEEEEECCCEE
T ss_conf 98666899738999987243121267699999999999997699699990485022242----2-651689998368337
Q ss_pred EEEEEEEEECCEEEEEECCCCCCCCCCC------CCCCC------CCCHHHHHHHHHHHHHHHHHHCC-----------C
Q ss_conf 5579998668934999389999987767------99989------97548899999999999999729-----------9
Q 003536 583 KNKVWVSTIEGLPVYFIEPHHPDKFFWR------GQFYG------EHDDFRRFSFFSRAALELLLQAG-----------K 639 (812)
Q Consensus 583 ~~~Vw~g~V~GI~VylIdp~~ps~fF~R------~~lYg------~~DD~~Rfi~FsrAvLe~Lkqlg-----------~ 639 (812)
.+++|.....|+++|||+++. ||.| +.+|+ +.|+..||.+||++++++++.++ .
T Consensus 76 ~~~~~~~~~~gv~~y~id~~~---~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~ 152 (536)
T 3vue_A 76 RVRFFHCYKRGVDRVFIDHPS---FLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 152 (536)
T ss_dssp EEEEEECEETTEEEEEEECTT---TTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCC
T ss_pred EEEEEEEEECCCEEEEECCHH---HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
T ss_conf 899999997895599964755---41233466778666887567664179999999999999999730265301101479
Q ss_pred CCCEEEECCCCCCHHHHHHHH-HHCCCC-CCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC---CCCCCCCCC
Q ss_conf 998999757620007999998-735589-999868997049966788890336523999000169765---456888884
Q 003536 640 QPDIIHCHDWQTAFVAPLYWD-LYVPKG-LNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDR---MQDNSAHDR 714 (812)
Q Consensus 640 kPDIIHiHDWhSAlVapLllk-~ya~~G-l~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDr---lqD~~~~~~ 714 (812)
.|||+||||||||++ +++++ .+...+ +.++|+|||+||+.++|.++...+..++++...+...+. +....++..
T Consensus 153 ~ddIiH~hDW~t~l~-~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 153 EDVVFVCNDWHTGPL-ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp SCEEEEEESGGGSTH-HHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCC
T ss_conf 987999776048999-9999986402332025634542157422455553336441896564010333311464100330
Q ss_pred HHHHHHHHHHCCCEEECCCCHHHH----HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCC-CCCHHHH
Q ss_conf 059999998769388468112664----11686333256899849985799899989898412331069677-0022996
Q 003536 715 INPLKGAIVFSNIVTTVSPSYAQE----GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNAND-LQGKAEN 789 (812)
Q Consensus 715 INllK~AI~~AD~VITVSpsyAeE----~g~GL~~iL~~~~~KI~vIpNGID~e~w~P~~D~~L~~~Y~~dd-l~gK~~n 789 (812)
+|+++.++.+||+|||||++|++| ++.|+......+..+|.+|+||||++.|+|.+|..++.+|...+ +++|..|
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~ 311 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALN 311 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 43999999853677876878853431263445220012545781899799664214887762100144434555656777
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 99999990999999999989986
Q 003536 790 KESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 790 K~aLqk~lGL~~~d~~~PLVG~V 812 (812)
|.+|++.+||+ .|++.|+|+||
T Consensus 312 k~~l~~~~gl~-~d~~~p~i~~v 333 (536)
T 3vue_A 312 KEALQAEAGLP-VDRKIPLIAFI 333 (536)
T ss_dssp HHHHHHHTTSC-CCTTSCEEEEE
T ss_pred HHHHHHHCCCC-CCCCCCEEEEE
T ss_conf 99999861998-79997589999
No 2
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=1.00 E-value=1 Score=227.79 Aligned_cols=294 Identities=18% Similarity=0.175 Sum_probs=190.8
Q ss_pred CEEEEEECCCC--------------------------------------CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 74999963128--------------------------------------8656797799999999999978994999903
Q 003536 512 LHVIHIAAEMA--------------------------------------PVAKVGGLGDVVAGLGKALQKKGHLVEIVLP 553 (812)
Q Consensus 512 MKIL~ISaE~a--------------------------------------PiaKvGGLG~VV~dLsKALakkGheV~VItP 553 (812)
.+|+|+|+|+. |-...||||+.+.+..++++.+|.++..++.
T Consensus 60 k~v~Y~S~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl 139 (796)
T 2c4m_A 60 RQQHYFSAEFLMGRALLNNLTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGL 139 (796)
T ss_dssp CEEEEECSCCCCBCSHHHHHHHTTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CEEEEEEHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 71899921321505566688755547999999998099989998645566657870888899999999757998689862
Q ss_pred CCCCCCC-----CC-----CCC-CC-C-------EEEEEEEECCCCEEEEEEEEEEECC--------EEEEEECCCCCCC
Q ss_conf 8885420-----01-----135-53-1-------1389864138841455799986689--------3499938999998
Q 003536 554 KYDCMQY-----DR-----IDD-LR-A-------LDVVVESYFDGRLFKNKVWVSTIEG--------LPVYFIEPHHPDK 606 (812)
Q Consensus 554 kY~~i~~-----e~-----v~~-L~-g-------i~V~V~s~f~G~~~~~~Vw~g~V~G--------I~VylIdp~~ps~ 606 (812)
+|..--- +| ... +. + -+..+.+.|.|+.+...-+-..+.| +++.-.++. ..
T Consensus 140 ~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~--~~ 217 (796)
T 2c4m_A 140 LYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIPYDMPITGYGTHNVGTLRLWKAEPW--EE 217 (796)
T ss_dssp CCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEEEEEEECCTTCCCCEEEEEEEEEES--SS
T ss_pred CCCCCCEEEEEECCEEEEECCCCCCCCCCEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCCEEEEEEEECCCC--CC
T ss_conf 4158871798258978861776545799604764772789974998999999724656767773589998860566--32
Q ss_pred C----CCC-----------------CCCCCCCC-----HHHH---HHHHHHHHHHH-HHHC-----CC----CCCEEEEC
Q ss_conf 7----767-----------------99989975-----4889---99999999999-9972-----99----99899975
Q 003536 607 F----FWR-----------------GQFYGEHD-----DFRR---FSFFSRAALEL-LLQA-----GK----QPDIIHCH 647 (812)
Q Consensus 607 f----F~R-----------------~~lYg~~D-----D~~R---fi~FsrAvLe~-Lkql-----g~----kPDIIHiH 647 (812)
| |.. ..+|+. | ...| ..||+.|+++. +++. .+ .|++||||
T Consensus 218 f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~-D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~~l~~l~~p~viHlN 296 (796)
T 2c4m_A 218 FDYDAFNAQRFTDAIIERERVSDICRVLYPN-DTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHKDLSNFAEFHSVQLN 296 (796)
T ss_dssp SCHHHHHTTCHHHHHHHHHHHHHHHHSSSCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHEEEEEE
T ss_pred CCHHHCCCCCHHHHHHCHHHHHCHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEC
T ss_conf 4654326765656544627561654337699-998540988997599999999999999998708873445997089938
Q ss_pred CCCCCHHHHHHHHHHCC-CCC--------CCCCEEEEECCCCCCCC--CCHHHHHH---------CCCCCCCCCC-----
Q ss_conf 76200079999987355-899--------99868997049966788--89033652---------3999000169-----
Q 003536 648 DWQTAFVAPLYWDLYVP-KGL--------NSARVCFTCHNFEYQGT--APAKELAS---------CGLDVQQLNR----- 702 (812)
Q Consensus 648 DWhSAlVapLllk~ya~-~Gl--------~~iPiVfTIHNleyqG~--~p~~kL~~---------lGL~~e~l~~----- 702 (812)
|||++++.+-+++.+.+ .|+ .+..++||+||+.++|. ||.+.+.. .+++...+..
T Consensus 297 DtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~ 376 (796)
T 2c4m_A 297 DTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADG 376 (796)
T ss_dssp SSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf 97177689999999745417987899998602178885686377764179999998757988887076899999998457
Q ss_pred -------CCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHC-CCCCCCCCCCCCCEEEEECCCCCCCC----CCCC
Q ss_conf -------76545688888405999999876938846811266411-68633325689984998579989998----9898
Q 003536 703 -------PDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEGG-QGLHSTLNFHSKKFVGILNGIDTDAW----NPAT 770 (812)
Q Consensus 703 -------pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~g-~GL~~iL~~~~~KI~vIpNGID~e~w----~P~~ 770 (812)
...+. ..+.+||.++|+++|+.|+|||+.|+++.. .-+.+++...+.++.+|+||||+..| +|..
T Consensus 377 ~~~~~~~~~~i~---~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l 453 (796)
T 2c4m_A 377 LDEETINRMAPI---QHGTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGL 453 (796)
T ss_dssp CCHHHHHHHCSE---ETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHH
T ss_pred CCHHHHHCCCCE---ECCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHH
T ss_conf 827665325412---48811699999984283210238778886136666698728640065618846677500359758
Q ss_pred CHHHHHCCC-----------------CCC-------CCCHHHHHHHH----HHHHCCCCCCCCCCEEEEC
Q ss_conf 412331069-----------------677-------00229969999----9990999999999989986
Q 003536 771 DTFLKVQYN-----------------AND-------LQGKAENKESI----RKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 771 D~~L~~~Y~-----------------~dd-------l~gK~~nK~aL----qk~lGL~~~d~~~PLVG~V 812 (812)
++.|...|+ +++ |+.|..||.+| ++++|++ .+|+.|++|+|
T Consensus 454 ~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~-vdpd~l~~~~v 522 (796)
T 2c4m_A 454 SDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIE-IDPESIFDVQI 522 (796)
T ss_dssp HHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCTTSEEEEEE
T ss_pred HHHHHHHCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCEEEEE
T ss_conf 8999986692122118699999886199889999999999999999999999985998-79997677776
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=1.00 E-value=1 Score=218.27 Aligned_cols=295 Identities=16% Similarity=0.184 Sum_probs=191.9
Q ss_pred CCCCEEEEEECCCCCC--------------------------------------CCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 9997499996312886--------------------------------------56797799999999999978994999
Q 003536 509 SSGLHVIHIAAEMAPV--------------------------------------AKVGGLGDVVAGLGKALQKKGHLVEI 550 (812)
Q Consensus 509 ~~~MKIL~ISaE~aPi--------------------------------------aKvGGLG~VV~dLsKALakkGheV~V 550 (812)
....+|.|+|+|+.+. ...||||+.+.+..++++.+|.++..
T Consensus 56 ~~~k~v~Y~S~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G 135 (796)
T 1l5w_A 56 ANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATG 135 (796)
T ss_dssp SSCCEEEEECSCCCCCCCHHHHHHHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 67863899834774788888788856758999999998099989998528886767873778799999989747998278
Q ss_pred EECCCCCCCCCCCCCCCCEEEE--------------------EEEECCCC-----------------------------E
Q ss_conf 9038885420011355311389--------------------86413884-----------------------------1
Q 003536 551 VLPKYDCMQYDRIDDLRALDVV--------------------VESYFDGR-----------------------------L 581 (812)
Q Consensus 551 ItPkY~~i~~e~v~~L~gi~V~--------------------V~s~f~G~-----------------------------~ 581 (812)
++.+|..---.+.. .+|-.++ +.+.|.|+ .
T Consensus 136 ~Gi~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~w~~~~~v~av~yd~pi~Gy~~~~~ 214 (796)
T 1l5w_A 136 YGLNYQYGLFRQSF-VDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVA 214 (796)
T ss_dssp EEECCSSCSCEEEE-ETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTTSCEECSEEEEEEEEEEEEECSSSCCE
T ss_pred EEEEECCCCEEEEE-CCCEEEEECCCCCCCCCCCEEECCCCEEEEEECCEEEECCEECCCCEEEEEEECCCCCCCCCCCE
T ss_conf 86213277626870-28856871676334799622406882799860998854122048826999980056367777745
Q ss_pred EEEEEEEEEECCEEEEEECCCCCCCCC--------CC---CCCCCCCC-----HHHH---HHHHHHHHHHH-HHHC----
Q ss_conf 455799986689349993899999877--------67---99989975-----4889---99999999999-9972----
Q 003536 582 FKNKVWVSTIEGLPVYFIEPHHPDKFF--------WR---GQFYGEHD-----DFRR---FSFFSRAALEL-LLQA---- 637 (812)
Q Consensus 582 ~~~~Vw~g~V~GI~VylIdp~~ps~fF--------~R---~~lYg~~D-----D~~R---fi~FsrAvLe~-Lkql---- 637 (812)
...++|...+.. .|.++.-...+|. .+ .-+|+. | ...| ..||+.|+++. +++.
T Consensus 215 n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~-D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~ 291 (796)
T 1l5w_A 215 QPLRLWQATHAH--PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPN-DNAFEGKKLRLMQQYFQCACSVADILRRHHLAG 291 (796)
T ss_dssp EEEEEEEEECSS--CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCC--CCCHHHCCCCCHHHHHHCHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999998824686--34754327765766655647674366447699-986443988998799999999999999998708
Q ss_pred -CC----CCCEEEECCCCCCHHHHHHHHHHCC-CCC--------CCCCEEEEECCCCCCCC--CCHHHHHH---------
Q ss_conf -99----9989997576200079999987355-899--------99868997049966788--89033652---------
Q 003536 638 -GK----QPDIIHCHDWQTAFVAPLYWDLYVP-KGL--------NSARVCFTCHNFEYQGT--APAKELAS--------- 692 (812)
Q Consensus 638 -g~----kPDIIHiHDWhSAlVapLllk~ya~-~Gl--------~~iPiVfTIHNleyqG~--~p~~kL~~--------- 692 (812)
.+ +|++|||||||++++.+-+++.+.+ .|+ .+..++||+||+.++|. ||.+.+..
T Consensus 292 ~~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii 371 (796)
T 1l5w_A 292 RKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQII 371 (796)
T ss_dssp CCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHH
T ss_pred CCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 98445587618984488428689999999866417987899998612277885687176663089999998757988887
Q ss_pred CCCCC--------------CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHH-CCCCCCCCCCCCCCEEEE
Q ss_conf 39990--------------001697654568888840599999987693884681126641-168633325689984998
Q 003536 693 CGLDV--------------QQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEG-GQGLHSTLNFHSKKFVGI 757 (812)
Q Consensus 693 lGL~~--------------e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~-g~GL~~iL~~~~~KI~vI 757 (812)
.+++. +.+. ..++. ..+.+||.++|+++|+.|+|||+.|+++. ..-+.+++...+.++.+|
T Consensus 372 ~~I~~~f~~~~~~~~~~~~~~~~-~~~i~---~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~i 447 (796)
T 1l5w_A 372 NEINTRFKTLVEKTWPGDEKVWA-KLAVV---HDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNV 447 (796)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHH-HHCSE---ETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEEC
T ss_pred HCCCHHHHHHHHHHCCCCHHHHH-HHHCC---CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 16699999999986598288774-31221---079544899999843711331389999987677667987076633888
Q ss_pred ECCCCCCCC----CCCCCHHHHHCCC----------------CCC-------CCCHHHHHHHH----HHHHCCCCCCCCC
Q ss_conf 579989998----9898412331069----------------677-------00229969999----9990999999999
Q 003536 758 LNGIDTDAW----NPATDTFLKVQYN----------------AND-------LQGKAENKESI----RKHLGLSSADARK 806 (812)
Q Consensus 758 pNGID~e~w----~P~~D~~L~~~Y~----------------~dd-------l~gK~~nK~aL----qk~lGL~~~d~~~ 806 (812)
+||||+..| +|..++.+...|+ ++| |+.|..||.+| ++++|++ .+|+.
T Consensus 448 TNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~-vdpd~ 526 (796)
T 1l5w_A 448 TNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIE-INPQA 526 (796)
T ss_dssp CCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCTTS
T ss_pred CCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCC
T ss_conf 48884778500259768899998549601148899998885399789999999999999999999999983998-59996
Q ss_pred CEEEEC
Q ss_conf 989986
Q 003536 807 PLVKFT 812 (812)
Q Consensus 807 PLVG~V 812 (812)
|++|+|
T Consensus 527 l~~~~v 532 (796)
T 1l5w_A 527 IFDIQI 532 (796)
T ss_dssp EEEEEE
T ss_pred CEEEEE
T ss_conf 667666
No 4
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=1.00 E-value=1 Score=214.94 Aligned_cols=284 Identities=19% Similarity=0.210 Sum_probs=173.9
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEE--------------------EEECCCCEEE-
Q ss_conf 5679779999999999997899499990388854200113553113898--------------------6413884145-
Q 003536 525 AKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVV--------------------ESYFDGRLFK- 583 (812)
Q Consensus 525 aKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V--------------------~s~f~G~~~~- 583 (812)
...||||+.+.+..++++.+|.+...++.+|..---.+... +|-.++. .+.|.|+...
T Consensus 120 LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~-dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~ 198 (824)
T 2gj4_A 120 LGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC-GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHT 198 (824)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE-TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE-CCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEC
T ss_conf 68872778799899989757998378841306887069845-89888707640136996420477736899738877754
Q ss_pred -EE-EEEE-----------EE--------CCEEEEEECCCCCC--CCCCC-----------------CCCCCCCC-----
Q ss_conf -57-9998-----------66--------89349993899999--87767-----------------99989975-----
Q 003536 584 -NK-VWVS-----------TI--------EGLPVYFIEPHHPD--KFFWR-----------------GQFYGEHD----- 618 (812)
Q Consensus 584 -~~-Vw~g-----------~V--------~GI~VylIdp~~ps--~fF~R-----------------~~lYg~~D----- 618 (812)
.+ .|.. .+ ..++++-..+...- ..|.. .-+|+. |
T Consensus 199 ~~g~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~-D~~~~G 277 (824)
T 2gj4_A 199 SQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPN-DNFFEG 277 (824)
T ss_dssp SSSEEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCC-SSCCCC
T ss_pred CCCCEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCHHHCCCCCHHHHHHCCCCHHHCCCCCCCC-CCCCCH
T ss_conf 8995432561489763467767877884599999996367555655326763989986356154207688999-975433
Q ss_pred HHHH---HHHHHHHHHHHH-HH-----CCC------------CCCEEEECCCCCCHHHHHHHHHHCCC-CC--------C
Q ss_conf 4889---999999999999-97-----299------------99899975762000799999873558-99--------9
Q 003536 619 DFRR---FSFFSRAALELL-LQ-----AGK------------QPDIIHCHDWQTAFVAPLYWDLYVPK-GL--------N 668 (812)
Q Consensus 619 D~~R---fi~FsrAvLe~L-kq-----lg~------------kPDIIHiHDWhSAlVapLllk~ya~~-Gl--------~ 668 (812)
...| ..||+.+++.-+ ++ +|. .|++|||||||++++.+-+++.+.+. ++ .
T Consensus 278 k~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~ 357 (824)
T 2gj4_A 278 KELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVT 357 (824)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 76763245554413899999999973236433445542115777679716984186999999998775178878999983
Q ss_pred CCCEEEEECCCCCCCC--CCHHHHHH-C--------CCCC--------------CCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9868997049966788--89033652-3--------9990--------------00169765456888884059999998
Q 003536 669 SARVCFTCHNFEYQGT--APAKELAS-C--------GLDV--------------QQLNRPDRMQDNSAHDRINPLKGAIV 723 (812)
Q Consensus 669 ~iPiVfTIHNleyqG~--~p~~kL~~-l--------GL~~--------------e~l~~pDrlqD~~~~~~INllK~AI~ 723 (812)
+..++||+||+.++|. ||...+.. + +++. +.+.....+++ .++..+||+++|++
T Consensus 358 ~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~ 436 (824)
T 2gj4_A 358 VKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIA 436 (824)
T ss_dssp HHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCCCCHHHHHHH
T ss_conf 67589983797588865454999998675598999998799999999876995899976655440-57883428999998
Q ss_pred HCCCEEECCCCHHHHH-CCCCCCCCCCCCCCEEEEECCCCCCCC----CCCCCHHHHHC-----------------CCC-
Q ss_conf 7693884681126641-168633325689984998579989998----98984123310-----------------696-
Q 003536 724 FSNIVTTVSPSYAQEG-GQGLHSTLNFHSKKFVGILNGIDTDAW----NPATDTFLKVQ-----------------YNA- 780 (812)
Q Consensus 724 ~AD~VITVSpsyAeE~-g~GL~~iL~~~~~KI~vIpNGID~e~w----~P~~D~~L~~~-----------------Y~~- 780 (812)
+|+.|+|||+.|+++. ..-+.+++...+.++.+|+||||+..| +|..++.|... |..
T Consensus 437 ~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d 516 (824)
T 2gj4_A 437 GSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDD 516 (824)
T ss_dssp TCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTC
T ss_pred HCCCEEEECHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCH
T ss_conf 34843457488999985577678887070120245378275664014797688989885571532087889988851661
Q ss_pred CCC-----CCHHHHHHH----HHHHHCCCCCCCCCCEEEEC
Q ss_conf 770-----022996999----99990999999999989986
Q 003536 781 NDL-----QGKAENKES----IRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 781 ddl-----~gK~~nK~a----Lqk~lGL~~~d~~~PLVG~V 812 (812)
+++ +.|..||.+ +++.+|++ .+|+.|++|+|
T Consensus 517 ~~~~~~~~~~K~~nK~~la~~l~~~~Gl~-vdpd~l~~g~v 556 (824)
T 2gj4_A 517 EAFIRDVAKVKQENKLKFAAYLEREYKVH-INPNSLFDVQV 556 (824)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCEEEEE
T ss_conf 89999999999997899899999996998-68995567666
No 5
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=204.72 Aligned_cols=282 Identities=29% Similarity=0.541 Sum_probs=192.0
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 74999963128865679779999999999997899499990388854200113553113898641388414557999866
Q 003536 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTI 591 (812)
Q Consensus 512 MKIL~ISaE~aPiaKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~~~~Vw~g~V 591 (812)
|||++|+.+++|....||.+.++..|+++|+++||+|+|+++.+...... ......+. ... .+.+ ...+.....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~-~~~-~~~~---~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-VTDAQVVS-RRD-TFAG---HITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHH-CTTCEEEE-EEC-CTTC---CEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCEEEE-EEC-CCCC---CEEEEEEEE
T ss_conf 96999964104665677399999999999997498789994476434543-45640578-741-5687---179999987
Q ss_pred CCEEEEEECCCCCCCCCCCCC-CCC------CCCHHHHHHHHHHHHHHHHHHCC--CCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 893499938999998776799-989------97548899999999999999729--999899975762000799999873
Q 003536 592 EGLPVYFIEPHHPDKFFWRGQ-FYG------EHDDFRRFSFFSRAALELLLQAG--KQPDIIHCHDWQTAFVAPLYWDLY 662 (812)
Q Consensus 592 ~GI~VylIdp~~ps~fF~R~~-lYg------~~DD~~Rfi~FsrAvLe~Lkqlg--~kPDIIHiHDWhSAlVapLllk~y 662 (812)
.|++++.++.. .++.+.. +|+ +.++..++.+|+.++.++++... .+|||||+|+|+++++ +.++...
T Consensus 75 ~gv~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~ 150 (485)
T 2qzs_A 75 NGVGIYLIDAP---HLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLA-PAYLAAR 150 (485)
T ss_dssp TTEEEEEEECH---HHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTH-HHHHHHT
T ss_pred CCCEEEEEECH---HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH-HHHHHHC
T ss_conf 89479997082---6506898766775457787358999999999999999845678997899606213378-9997543
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHH---
Q ss_conf 55899998689970499667888903365239990001697654568888840599999987693884681126641---
Q 003536 663 VPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEG--- 739 (812)
Q Consensus 663 a~~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~--- 739 (812)
..++|+|+|+|+..+.+.++...+..+|++...+. .+.+. +.....+++.++..+|.+++||+.+++..
T Consensus 151 ----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 222 (485)
T 2qzs_A 151 ----GRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFN-IHGLE---FNGQISFLKAGLYYADHITAVSPTYAREITEP 222 (485)
T ss_dssp ----TCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCS-TTTTE---ETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH
T ss_pred ----CCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCC-CCCCC---CCCCCCHHHHHHHHCCEEEECCHHHHHHHHCC
T ss_conf ----68997899946841357889888876499913213-11123---24654699999875386885688999998540
Q ss_pred --CCCCCCCCCCCC--CCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf --168633325689--9849985799899989898412331069677002299699999990999999999989986
Q 003536 740 --GQGLHSTLNFHS--KKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 740 --g~GL~~iL~~~~--~KI~vIpNGID~e~w~P~~D~~L~~~Y~~ddl~gK~~nK~aLqk~lGL~~~d~~~PLVG~V 812 (812)
+.+++.++..+. .++.+||||||.+.|.|..+..++..|+.+++.+|..++..+++.+|++. +++.+++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~i~~v 298 (485)
T 2qzs_A 223 QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKV-DDKVPLFAVV 298 (485)
T ss_dssp HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCC-CTTSCEEEEE
T ss_pred CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCEEEEEE
T ss_conf 147246899985066786699746987664586444222123663006577884999998719888-9997399996
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=203.46 Aligned_cols=283 Identities=30% Similarity=0.518 Sum_probs=196.0
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 74999963128865679779999999999997899499990388854200113553113898641388414557999866
Q 003536 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTI 591 (812)
Q Consensus 512 MKIL~ISaE~aPiaKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~~~~Vw~g~V 591 (812)
|||++|+.+++|....||.+.++..|+++|+++||+|+|+++.+...... ...+..+. .....+ |. ...++....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~-~~~~~~-~~--~~~~~~~~~ 75 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAA-VTDPVKCF-EFTDLL-GE--KADLLEVQH 75 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHH-CCSCEEEE-EESCSS-SC--CEEEEEEEE
T ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCCEEE-EEEEEC-CC--EEEEEEEEE
T ss_conf 96999944651565665499999999999997698699991564433444-35651368-999830-87--478999996
Q ss_pred CCEEEEEECCCCCCCCCCCC-CCCC------CCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 89349993899999877679-9989------9754889999999999999972--9999899975762000799999873
Q 003536 592 EGLPVYFIEPHHPDKFFWRG-QFYG------EHDDFRRFSFFSRAALELLLQA--GKQPDIIHCHDWQTAFVAPLYWDLY 662 (812)
Q Consensus 592 ~GI~VylIdp~~ps~fF~R~-~lYg------~~DD~~Rfi~FsrAvLe~Lkql--g~kPDIIHiHDWhSAlVapLllk~y 662 (812)
.|++++.++.. .++.+. .+|+ +.++..++.+|+.++.++++.. ..+|||||+|+|+++++ +.++...
T Consensus 76 ~gv~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~-~~~~~~~ 151 (485)
T 1rzu_A 76 ERLDLLILDAP---AYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMT-PVYMRYA 151 (485)
T ss_dssp TTEEEEEEECH---HHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTH-HHHHHHS
T ss_pred CCCEEEEEECH---HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-HHHHHHC
T ss_conf 69569998486---7727776655886566653067999999999999999861579998899646305578-9997310
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHH---
Q ss_conf 55899998689970499667888903365239990001697654568888840599999987693884681126641---
Q 003536 663 VPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEG--- 739 (812)
Q Consensus 663 a~~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~--- 739 (812)
. ..++|+|+|+|+..+.+.++...+..+|++...+. ++.+. ++....+++.++..||.+++||+.+++..
T Consensus 152 ~---~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 224 (485)
T 1rzu_A 152 E---TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFG-MEGIE---YYNDVSFLKGGLQTATALSTVSPSYAEEILTA 224 (485)
T ss_dssp S---SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSS-TTTTE---ETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred C---CCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCC-CCCCC---CCCCCCHHHHHHHHCCEEEECCHHHHHHHHCC
T ss_conf 3---58997899966754468788778734399803202-00013---25623599988864677996087589998354
Q ss_pred --CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf --1686333256899849985799899989898412331069677002299699999990999999999989986
Q 003536 740 --GQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 740 --g~GL~~iL~~~~~KI~vIpNGID~e~w~P~~D~~L~~~Y~~ddl~gK~~nK~aLqk~lGL~~~d~~~PLVG~V 812 (812)
|.+++..++....++.+||||||.+.|.|..+..++..|..+++.+|..++..+++.+|++. + +.+++++|
T Consensus 225 ~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~-~~~~i~~v 297 (485)
T 1rzu_A 225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-D-GSPLFCVI 297 (485)
T ss_dssp HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC-S-SSCEEEEE
T ss_pred CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-C-CCEEEEEE
T ss_conf 3576658999860688169708986020588665110001243244567886999999629888-9-98399997
No 7
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=1.00 E-value=1 Score=197.78 Aligned_cols=265 Identities=18% Similarity=0.146 Sum_probs=166.2
Q ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCEEEE--------EEE-----ECC
Q ss_conf 4999963128865679779999999999997-89949999038885420011355311389--------864-----138
Q 003536 513 HVIHIAAEMAPVAKVGGLGDVVAGLGKALQK-KGHLVEIVLPKYDCMQYDRIDDLRALDVV--------VES-----YFD 578 (812)
Q Consensus 513 KIL~ISaE~aPiaKvGGLG~VV~dLsKALak-kGheV~VItPkY~~i~~e~v~~L~gi~V~--------V~s-----~f~ 578 (812)
-+.=+++|..- ||||.=.|+..=++.+++ .|-....|.|........+++.+..-+.. +.. .-.
T Consensus 29 ~lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (725)
T 3nb0_A 29 LLFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESR 106 (725)
T ss_dssp EEEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTT
T ss_pred EEEEEEHHHHC--CCCCEEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHC
T ss_conf 57762534421--5577678873343678998689279988888776786135568888033200047999999999978
Q ss_pred CCEEEEEEEEEEECCEE-EEEECCCCCCCCCCC--------------C--CCCCCCCHHHHHHHHHHHHHHHHHHCC-CC
Q ss_conf 84145579998668934-999389999987767--------------9--998997548899999999999999729-99
Q 003536 579 GRLFKNKVWVSTIEGLP-VYFIEPHHPDKFFWR--------------G--QFYGEHDDFRRFSFFSRAALELLLQAG-KQ 640 (812)
Q Consensus 579 G~~~~~~Vw~g~V~GI~-VylIdp~~ps~fF~R--------------~--~lYg~~DD~~Rfi~FsrAvLe~Lkqlg-~k 640 (812)
|-.+.++-| .+.|-| |++++-. .++++ + ..|+..||+.+|.||+.++++.+...+ +.
T Consensus 107 G~~v~~GrW--~i~G~P~viL~d~~---~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~~~~ 181 (725)
T 3nb0_A 107 GVHFVYGRW--LIEGAPKVILFDLD---SVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQH 181 (725)
T ss_dssp TCCEEEEEE--SSTTCCEEEEECSG---GGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCEEEEEEE--ECCCCCEEEEEECH---HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 991899888--54998569999670---7888899999999998684998766521189999999999999988627899
Q ss_pred CCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCC---C---CCCCCHH-HHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9899975762000799999873558999986899704996---6---7888903-3652399900016976545688888
Q 003536 641 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFE---Y---QGTAPAK-ELASCGLDVQQLNRPDRMQDNSAHD 713 (812)
Q Consensus 641 PDIIHiHDWhSAlVapLllk~ya~~Gl~~iPiVfTIHNle---y---qG~~p~~-kL~~lGL~~e~l~~pDrlqD~~~~~ 713 (812)
|||+|||||+++++ +.+++.. ..++++|||+|+.. + ||.++.. .+...+++.+.. ..+ .+.
T Consensus 182 pdIiH~HDW~tg~~-~~~Lk~~----~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~----~~~---i~~ 249 (725)
T 3nb0_A 182 AIVAHFHEWLAGVA-LPLCRKR----RIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAG----RFG---IYH 249 (725)
T ss_dssp EEEEEEESGGGCTH-HHHHHHT----TCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHH----HTT---CHH
T ss_pred CCEEEECCHHHHHH-HHHHHHH----CCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCHHHH----HHC---HHH
T ss_conf 84799473666289-9999975----78998999970164666565248973544355508973444----311---068
Q ss_pred CHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 40599999987693884681126641168633325689984998579989998989841233106967700229969999
Q 003536 714 RINPLKGAIVFSNIVTTVSPSYAQEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESI 793 (812)
Q Consensus 714 ~INllK~AI~~AD~VITVSpsyAeE~g~GL~~iL~~~~~KI~vIpNGID~e~w~P~~D~~L~~~Y~~ddl~gK~~nK~aL 793 (812)
.++++|.++.+||+|||||++|++|. ..++..+...+ ||||||++.|+|.. +.++.|..+|+.+
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei----~~Ll~r~~d~i--IpNGID~~~f~p~~----------~~~~~k~~aK~kl 313 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEA----EHLLKRKPDGI--LPNGLNVIKFQAFH----------EFQNLHALKKEKI 313 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHH----HHHTSSCCSEE--CCCCBCCCCCSSTT----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEECCHHHHHHH----HHHHCCCCCEE--ECCCCCCCCCCCCH----------HHHHHHHHHHHHH
T ss_conf 88999999974899998998999999----99966999879--75881035458413----------5677799999999
Q ss_pred HHHH------CCCCCCCCCCEEEEC
Q ss_conf 9990------999999999989986
Q 003536 794 RKHL------GLSSADARKPLVKFT 812 (812)
Q Consensus 794 qk~l------GL~~~d~~~PLVG~V 812 (812)
++.+ |++....+.|++++|
T Consensus 314 q~~l~~~~~~~l~l~~dk~liifiv 338 (725)
T 3nb0_A 314 NDFVRGHFHGCFDFDLDNTLYFFIA 338 (725)
T ss_dssp HHHHHHHTTTCCCSCGGGEEEEEEE
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEEE
T ss_conf 9998763046778897760499999
No 8
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=185.34 Aligned_cols=252 Identities=27% Similarity=0.398 Sum_probs=182.4
Q ss_pred CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEE
Q ss_conf 99749999631288656797799999999999978994999903888542001135531138986413884145579998
Q 003536 510 SGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVS 589 (812)
Q Consensus 510 ~~MKIL~ISaE~aPiaKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~~~~Vw~g 589 (812)
++|||++|+.+++| ...||.+.++..|+++|+++||+|+|++|.+....... +..+ .. .+....+.++..
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~---~~~~----~~--~~~~~~~~~~~~ 70 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE---IGKI----RV--FGEEVQVKVSYE 70 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE---EEEE----EE--TTEEEEEEEEEE
T ss_pred CCEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH---HCCC----CC--CCCCCCEEEEEC
T ss_conf 95289999502177-66688999999999999977985999836778823655---2463----01--476531024312
Q ss_pred EECCEEEEEECCCCCCCCCCCCCCCC-CCCH-HHHHHHHHHHHHHHHHHC---CCCCCEEEECCCCCCHHHHHHHHHHCC
Q ss_conf 66893499938999998776799989-9754-889999999999999972---999989997576200079999987355
Q 003536 590 TIEGLPVYFIEPHHPDKFFWRGQFYG-EHDD-FRRFSFFSRAALELLLQA---GKQPDIIHCHDWQTAFVAPLYWDLYVP 664 (812)
Q Consensus 590 ~V~GI~VylIdp~~ps~fF~R~~lYg-~~DD-~~Rfi~FsrAvLe~Lkql---g~kPDIIHiHDWhSAlVapLllk~ya~ 664 (812)
...|++++.++. .+|.+..+|+ +.++ ..++..|++++..++++. ..+|||||+|+|++++++ .+++..
T Consensus 71 ~~~gv~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~-~~~~~~-- 143 (439)
T 3fro_A 71 ERGNLRIYRIGG----GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAG-ALIKKY-- 143 (439)
T ss_dssp EETTEEEEEEES----GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHH-HHHHHH--
T ss_pred CCCCCEEEEECC----HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH-HHHHHC--
T ss_conf 578840899353----2205212466776300232578999999999997444799819994640343458-988652--
Q ss_pred CCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHCCCCC
Q ss_conf 89999868997049966788890336523999000169765456888884059999998769388468112664116863
Q 003536 665 KGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEGGQGLH 744 (812)
Q Consensus 665 ~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~g~GL~ 744 (812)
.++|+|+|+|+..+.+. +...+...++ ..........+++..+..||.++++|+.+++. ..
T Consensus 144 ---~~~~~v~~~h~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~----~~ 204 (439)
T 3fro_A 144 ---FKIPAVFTIHRLNKSKL-PAFYFHEAGL-----------SELAPYPDIDPEHTGGYIADIVTTVSRGYLID----EW 204 (439)
T ss_dssp ---HCCCEEEEESCCCCCCE-EHHHHHHTTC-----------GGGCCSSEECHHHHHHHHCSEEEESCHHHHHH----TH
T ss_pred ---CCCCEEEEECCCCCCCC-CHHHHCCCCC-----------CCCCCCCEEEHHHHHHHHCCEEEECCHHHHHH----HH
T ss_conf ---69978999653444568-5677474551-----------00356663207666554345887268989999----86
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 33256899849985799899989898412331069677002299699999990999999999989986
Q 003536 745 STLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 745 ~iL~~~~~KI~vIpNGID~e~w~P~~D~~L~~~Y~~ddl~gK~~nK~aLqk~lGL~~~d~~~PLVG~V 812 (812)
+.++....++.+||||||.+.|.|... -..+..++..+++.+|++. + +.++++
T Consensus 205 ~~~~~~~~~i~vi~ngvd~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~-~~i~~~ 257 (439)
T 3fro_A 205 GFFRNFEGKITYVFNGIDCSFWNESYL-----------TGSRDERKKSLLSKFGMDE---G-VTFMFI 257 (439)
T ss_dssp HHHGGGTTSEEECCCCCCTTTSCGGGS-----------CSCHHHHHHHHHHHHTCCS---C-EEEEEE
T ss_pred HHHHHCCCCEEECCCCCCCHHCCCCCC-----------CCHHHHHHHHHHHHCCCCC---C-CEEEEE
T ss_conf 056504773453478888043084322-----------1104566999999739999---8-479997
No 9
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=164.20 Aligned_cols=272 Identities=16% Similarity=0.155 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEECCCC---------CCCCCCCHHHHHHH--------HHHHHHHCCCEEE----E
Q ss_conf 1245687653105889999974999963128---------86567977999999--------9999997899499----9
Q 003536 492 NEHEAISTFLKLTSSSISSGLHVIHIAAEMA---------PVAKVGGLGDVVAG--------LGKALQKKGHLVE----I 550 (812)
Q Consensus 492 ~~~e~~~~~~~~~~~~~~~~MKIL~ISaE~a---------PiaKvGGLG~VV~d--------LsKALakkGheV~----V 550 (812)
.+...++.|++... ..|+|+||+...+ |- +||+-+||.+ |+++|+++||+|+ |
T Consensus 263 p~~~~~~~~~~~~~----~~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v 336 (816)
T 3s28_A 263 PDPCTLETFLGRVP----MVFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILI 336 (816)
T ss_dssp CCHHHHHHHHHHSC----CCCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred CCCCCHHHHHCCCC----CEEEEEEECCCCCCCCCCCCCCCC--CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 99630777736588----524899984776657544578888--898365099899899999999999779962001689
Q ss_pred EECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCEEEEEECCCCC----CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 903888542001135531138986413884145579998668934999389999----9877679998997548899999
Q 003536 551 VLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHP----DKFFWRGQFYGEHDDFRRFSFF 626 (812)
Q Consensus 551 ItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~~~~Vw~g~V~GI~VylIdp~~p----s~fF~R~~lYg~~DD~~Rfi~F 626 (812)
+|+.+......... ...+ ...| .+|++++.++.... ..|+.+..++++.+ .|+
T Consensus 337 ~Tr~~~~~~g~~y~--~~~e-----~i~~-----------~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~-----~F~ 393 (816)
T 3s28_A 337 LTRLLPDAVGTTCG--ERLE-----RVYD-----------SEYCDILRVPFRTEKGIVRKWISRFEVWPYLE-----TYT 393 (816)
T ss_dssp EEECCTTCTTSSTT--SSEE-----ECTT-----------CSSEEEEEECEEETTEEECSCCCTTTCGGGHH-----HHH
T ss_pred EECCCCCCCCCCCC--CCCE-----EECC-----------CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH-----HHH
T ss_conf 96898787777657--7511-----5548-----------69759999668776654334565778899999-----999
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999972999989997576200079999987355899998689970499667888903365239990001697654
Q 003536 627 SRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRM 706 (812)
Q Consensus 627 srAvLe~Lkqlg~kPDIIHiHDWhSAlVapLllk~ya~~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrl 706 (812)
..+...+++..+.+|||||+|.|.+++++.+..+. .++|+|+|+|++........ +..+..+. ..+
T Consensus 394 ~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~------~gvP~V~T~Hsl~~~k~~~~------~~~~~~~~--~~y 459 (816)
T 3s28_A 394 EDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHK------LGVTQCTIAHALEKTKYPDS------DIYWKKLD--DKY 459 (816)
T ss_dssp HHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHH------HTCCEEEECSCCHHHHSTTT------TTTHHHHH--HHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCCC------CCHHHHHH--HHH
T ss_conf 99999999965899739996885389999999997------59988999816630012223------30155677--888
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEECCCCHHHH-------HCC----CCCCC------CCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 56888884059999998769388468112664-------116----86333------25689984998579989998989
Q 003536 707 QDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE-------GGQ----GLHST------LNFHSKKFVGILNGIDTDAWNPA 769 (812)
Q Consensus 707 qD~~~~~~INllK~AI~~AD~VITVSpsyAeE-------~g~----GL~~i------L~~~~~KI~vIpNGID~e~w~P~ 769 (812)
....++..++.++..||.|+++|+..+++ ++. ++.++ +.....++.+||||||.+.|.|.
T Consensus 460 ---~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~ 536 (816)
T 3s28_A 460 ---HFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPY 536 (816)
T ss_dssp ---CHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCT
T ss_pred ---HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCCC
T ss_conf ---89888889999998499999888999999998887764420135411221012244677887998897478872863
Q ss_pred CCHH--HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 8412--331069677002299699999990999999999989986
Q 003536 770 TDTF--LKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 770 ~D~~--L~~~Y~~ddl~gK~~nK~aLqk~lGL~~~d~~~PLVG~V 812 (812)
.... +...|. .+.....++..+++.+|+.. +++.|+|++|
T Consensus 537 ~~~~~Rl~~~~~--~i~~~l~~p~~~r~~lg~l~-~~~~~vIl~v 578 (816)
T 3s28_A 537 TEEKRRLTKFHS--EIEELLYSDVENKEHLCVLK-DKKKPILFTM 578 (816)
T ss_dssp TCTTTCCGGGHH--HHHHHHHCSCCBTTEESCBS-CTTSCEEEEE
T ss_pred CHHHHHHHHCCC--CCCCCCCCHHHHHHHHCCCC-CCCCEEEEEE
T ss_conf 103554320023--20001246056777744457-8998399997
No 10
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=140.93 Aligned_cols=217 Identities=16% Similarity=0.230 Sum_probs=126.2
Q ss_pred CCEEEEEECCCCCCC---------CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCE
Q ss_conf 974999963128865---------67977999999999999789949999038885420011355311389864138841
Q 003536 511 GLHVIHIAAEMAPVA---------KVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRL 581 (812)
Q Consensus 511 ~MKIL~ISaE~aPia---------KvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~ 581 (812)
+|||++|+..++|.. ..||.+.++..|+++|.+.||+|+|+++........ .... .. . .+.
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---~~~~-~~--~-~~~--- 76 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWP---EFSG-EI--D-YYQ--- 76 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBG---GGCC-SE--E-ECT---
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC---CHHH-HH--H-HCC---
T ss_conf 524999965777443442347888879943349999999985598489995788723365---1135-67--7-506---
Q ss_pred EEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf 45579998668934999389999987767999899754889999999999999972999989997576200079999987
Q 003536 582 FKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDL 661 (812)
Q Consensus 582 ~~~~Vw~g~V~GI~VylIdp~~ps~fF~R~~lYg~~DD~~Rfi~FsrAvLe~Lkqlg~kPDIIHiHDWhSAlVapLllk~ 661 (812)
...|++++.++.. +..++.+..+.. ....|.....+++++.+.+|||||+|.+.+++++.+..+.
T Consensus 77 --------~~~gv~v~~~~~~-~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~ 141 (499)
T 2r60_A 77 --------ETNKVRIVRIPFG-GDKFLPKEELWP------YLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNI 141 (499)
T ss_dssp --------TCSSEEEEEECCS-CSSCCCGGGCGG------GHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHH
T ss_pred --------CCCCEEEEEECCC-CCCCCCHHHHHH------HHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf --------7898179982577-767768899999------8999999999999853899888997578620799998873
Q ss_pred HCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHCC
Q ss_conf 35589999868997049966788890336523999000169765456888884059999998769388468112664116
Q 003536 662 YVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEGGQ 741 (812)
Q Consensus 662 ya~~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE~g~ 741 (812)
.++|+|+|+|+..+.... .+...+.....+. +.. ++.....+++..+..+|.|+++|+..++..
T Consensus 142 ------~~~p~v~~~H~~~~~~~~---~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-- 205 (499)
T 2r60_A 142 ------KGLPFTFTGHSLGAQKME---KLNVNTSNFKEMD---ERF--KFHRRIIAERLTMSYADKIIVSTSQERFGQ-- 205 (499)
T ss_dssp ------HCCCEEEECSSCHHHHHH---TTCCCSTTSHHHH---HHH--CHHHHHHHHHHHHHHCSEEEESSHHHHHHT--
T ss_pred ------CCCCEEEECCCCCCCCCH---HHCCCCCCCCHHH---HHH--HHHHHHHHHHHHHHCCCEEEECCHHHHHHH--
T ss_conf ------599689980684001113---4414787761245---567--888999999999846899998888999999--
Q ss_pred CCCCC--CC-C----CCCCEEEEECCCCCCCCCCCC
Q ss_conf 86333--25-6----899849985799899989898
Q 003536 742 GLHST--LN-F----HSKKFVGILNGIDTDAWNPAT 770 (812)
Q Consensus 742 GL~~i--L~-~----~~~KI~vIpNGID~e~w~P~~ 770 (812)
... ++ . ...++.+||||||.+.|.|..
T Consensus 206 --~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~ 239 (499)
T 2r60_A 206 --YSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEY 239 (499)
T ss_dssp --TTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCC
T ss_pred --HHHHCCCCCCCCCCCCCEEEECCCCCHHHCCCCC
T ss_conf --8641246422346788769987995866568641
Done!