BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003542
(811 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE S M L H N+VQ L G EEK ++V E M+K L Y+R SR R+
Sbjct: 59 QAFLAEASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSV 113
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ L + ME+L H +L N+ + ++ KVS FGL
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-----AKVSDFGL----- 163
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
T AS T P W APE L E+ K S K+DV+SFG+L +E+ +
Sbjct: 164 -----TKEASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYS 209
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ L+ + + G + P G P + + K CWH + + RPSF +
Sbjct: 210 FGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267
Query: 488 LRYIK 492
L +IK
Sbjct: 268 LEHIK 272
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE S M L H N+VQ L G EEK ++V E M+K L Y+R SR R+
Sbjct: 44 QAFLAEASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSV 98
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ L + ME+L H +L N+ + ++ KVS FGL
Sbjct: 99 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-----AKVSDFGL----- 148
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
T AS T P W APE L E+ K S K+DV+SFG+L +E+ +
Sbjct: 149 -----TKEASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYS 194
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ L+ + + G + P G P + + K CWH + + RPSF +
Sbjct: 195 FGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 252
Query: 488 LRYIK 492
L +IK
Sbjct: 253 LEHIK 257
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 33/245 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE S M L H N+VQ L G EEK ++V E M+K L Y+R SR R+
Sbjct: 231 QAFLAEASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSV 285
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ L + ME+L H +L N+ + ++ KVS FGL
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-----AKVSDFGL----- 335
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
T AS T P W APE L E+ K S K+DV+SFG+L +E+ +
Sbjct: 336 -----TKEASSTQDTGKLPVKWTAPEALREK---------KFSTKSDVWSFGILLWEIYS 381
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ L+ + + G + P G P + ++ K CWH + + RP+F +
Sbjct: 382 FGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439
Query: 488 LRYIK 492
L +I+
Sbjct: 440 LEHIR 444
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE S M L H N+VQ L G EEK ++V E M+K L Y+R SR R+
Sbjct: 50 QAFLAEASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSV 104
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ L + ME+L H +L N+ + ++ KVS FGL
Sbjct: 105 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV-----AKVSDFGL----- 154
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
T AS T P W APE L E + S K+DV+SFG+L +E+ +
Sbjct: 155 -----TKEASSTQDTGKLPVKWTAPEALRE---------AAFSTKSDVWSFGILLWEIYS 200
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ L+ + + G + P G P + + K CWH + + RPSF +
Sbjct: 201 FGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 258
Query: 488 LRYIK 492
L +IK
Sbjct: 259 LEHIK 263
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 47/274 (17%)
Query: 235 WLGDSFVL---RHFYGE-----LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVM 286
W+GD + RH E +E++ E L HPNI+ L G C +E LVM
Sbjct: 28 WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA-LRGVCLKEPN-LCLVM 85
Query: 287 ELMSKDLSCYMRETFGSRRRNSFSLP--VVVDIMLQIARGMEFLHAQKI---YHGELNPS 341
E + R +R + +P ++V+ +QIARGM +LH + I H +L S
Sbjct: 86 E--------FARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 342 NIYLKARSMEGYFH---VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAE 398
NI + + G +K++ FGL AR + R T +A Y W APEV+
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL--AREW-HRTT------KMSAAGAYAWMAPEVI-- 186
Query: 399 QEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPL-FPS 457
S S+ +DV+S+G+L +ELLTG+VPF + G + + + L PS
Sbjct: 187 -------RASMFSKGSDVWSYGVLLWELLTGEVPFRG--IDGLAVAYGVAMNKLALPIPS 237
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYI 491
P+ L + CW+ +P RPSF++I L I
Sbjct: 238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++++E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIIIEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++++E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIIIEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 53 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 106
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 107 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T T PA A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 162 MT-GDTYTAPAG-----AKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 206
Query: 427 LT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ L + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 262
Query: 484 I 484
I
Sbjct: 263 I 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 108 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 162
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T T PA A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 163 MT-GDTYTAPAG-----AKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 207
Query: 427 LT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ L + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 263
Query: 484 I 484
I
Sbjct: 264 I 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 110
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 111 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 165
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 166 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 207
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 208 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 481 FSSI 484
F+ I
Sbjct: 264 FAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 236 LGDSFVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLS 294
LGDS + + E+ M +L+HPNIV+ L G + +VME + DL
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGDLY 109
Query: 295 CYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEG 352
+ + + + V + +ML IA G+E++ Q I H +L NI+L++
Sbjct: 110 HRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
KV+ FGLS ++ + W APE + +E +E
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLL----------GNFQWMAPETIGAEE-------ESYTE 207
Query: 413 KADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA-GERPLFPSGSPKYLVNLTKKCW 471
KAD YSF M+ + +LTG+ PF++ K IR G RP P P L N+ + CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 472 HTNPSQRPSFSSICRIL 488
+P +RP FS I + L
Sbjct: 268 SGDPKKRPHFSYIVKEL 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 116/241 (48%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++++E M+ +L Y+RE R
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIIIEFMTYGNLLDYLREC----NR 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 104 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 158
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T + + A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 159 MTGDTXTA------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 203
Query: 427 LT-GKVPFE--DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ D + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 259
Query: 484 I 484
I
Sbjct: 260 I 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++++E M+ +L Y+RE R
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIIIEFMTYGNLLDYLREC----NR 110
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 165
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 166 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 207
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 208 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 481 FSSI 484
F+ I
Sbjct: 264 FAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 108 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 162
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 163 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 204
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 205 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 260
Query: 481 FSSI 484
F+ I
Sbjct: 261 FAEI 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 116/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 259 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 312
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H L N + + VKV+ FGLS
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL-----VKVADFGLSRL 367
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 368 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 409
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 410 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 465
Query: 481 FSSI 484
F+ I
Sbjct: 466 FAEI 469
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 104 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 158
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T + + A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 159 MTGDTXTA------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 203
Query: 427 LT-GKVPFE--DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ D + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 259
Query: 484 I 484
I
Sbjct: 260 I 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 110
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 165
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 166 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 207
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 208 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 481 FSSI 484
F+ I
Sbjct: 264 FAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 118
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 119 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 173
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 174 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 215
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 216 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 271
Query: 481 FSSI 484
F+ I
Sbjct: 272 FAEI 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 116/241 (48%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++++E M+ +L Y+RE R
Sbjct: 53 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIIIEFMTYGNLLDYLREC----NR 106
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 107 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T + + A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 162 MTGDTXTA------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 206
Query: 427 LT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ L + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 262
Query: 484 I 484
I
Sbjct: 263 I 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 108 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 162
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 163 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 204
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 205 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 260
Query: 481 FSSI 484
F+ I
Sbjct: 261 FAEI 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 57 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 113 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 162
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 163 -ADENXYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 209
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 210 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 267
Query: 488 LR 489
LR
Sbjct: 268 LR 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 110
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 165
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 166 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 207
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 208 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 481 FSSI 484
F+ I
Sbjct: 264 FAEI 267
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 63 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 118
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 119 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 168
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 169 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 215
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 216 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273
Query: 488 LR 489
LR
Sbjct: 274 LR 275
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 57 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 113 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 162
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 163 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 209
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 210 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 267
Query: 488 LR 489
LR
Sbjct: 268 LR 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 56 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 109
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 110 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 164
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 165 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 206
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 207 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 262
Query: 481 FSSI 484
F+ I
Sbjct: 263 FAEI 266
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 51 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 106
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 107 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 156
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 157 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 203
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 204 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 261
Query: 488 LR 489
LR
Sbjct: 262 LR 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 53 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 108
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 109 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 158
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 159 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 205
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 206 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 263
Query: 488 LR 489
LR
Sbjct: 264 LR 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 106 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 160
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 161 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 202
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 203 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 481 FSSI 484
F+ I
Sbjct: 259 FAEI 262
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 73 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 128
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 129 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 178
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 179 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 225
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 226 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 283
Query: 488 LR 489
LR
Sbjct: 284 LR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 73 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 128
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 129 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 178
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 179 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 225
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 226 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 283
Query: 488 LR 489
LR
Sbjct: 284 LR 285
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
S V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 104 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 158
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T T+ + + A P W APE LA +K S K+DV++FG+L
Sbjct: 159 MTGDTFTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 200
Query: 424 FELLT-GKVPFE--DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ D + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 201 WEIATYGMSPYPGIDPSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 256
Query: 481 FSSI 484
F+ I
Sbjct: 257 FAEI 260
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 71 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 126
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 127 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 176
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 177 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 223
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 224 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 281
Query: 488 LR 489
LR
Sbjct: 282 LR 283
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 116/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 256 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 309
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H L N + + VKV+ FGLS
Sbjct: 310 QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL-----VKVADFGLSRL 364
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 365 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 406
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 407 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 462
Query: 481 FSSI 484
F+ I
Sbjct: 463 FAEI 466
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 30/257 (11%)
Query: 236 LGDSFVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLS 294
LGDS + + E+ M +L+HPNIV+ L G + +VME + DL
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGDLY 109
Query: 295 CYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEG 352
+ + + + V + +ML IA G+E++ Q I H +L NI+L++
Sbjct: 110 HRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
KV+ FG S ++ + W APE + +E +E
Sbjct: 165 PVCAKVADFGTSQQSVHSVSGLL----------GNFQWMAPETIGAEE-------ESYTE 207
Query: 413 KADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA-GERPLFPSGSPKYLVNLTKKCW 471
KAD YSF M+ + +LTG+ PF++ K IR G RP P P L N+ + CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 472 HTNPSQRPSFSSICRIL 488
+P +RP FS I + L
Sbjct: 268 SGDPKKRPHFSYIVKEL 284
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 116/244 (47%), Gaps = 40/244 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 298 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 351
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H L N + + VKV+ FGLS
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL-----VKVADFGLSRL 406
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA +K S K+DV++FG+L
Sbjct: 407 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLL 448
Query: 424 FELLT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E+ T G P+ L + + K+ R ERP G P+ + L + CW NPS RPS
Sbjct: 449 WEIATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPS 504
Query: 481 FSSI 484
F+ I
Sbjct: 505 FAEI 508
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 34/241 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F+++ E M+ +L Y+RE R
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPP-FYIITEFMTYGNLLDYLREC----NR 110
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL-----VKVADFGLSRL 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
T + + A P W APE LA +K S K+DV++FG+L +E+
Sbjct: 166 MTGDTXTA------HAGAKFPIKWTAPESLA---------YNKFSIKSDVWAFGVLLWEI 210
Query: 427 LT-GKVPFEDGHLQG--DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
T G P+ L + + K+ R ERP G P+ + L + CW NPS RPSF+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRM-ERP---EGCPEKVYELMRACWQWNPSDRPSFAE 266
Query: 484 I 484
I
Sbjct: 267 I 267
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 30/257 (11%)
Query: 236 LGDSFVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLS 294
LGDS + + E+ M +L+HPNIV+ L G + +VME + DL
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-LYGLMHNPPR---MVMEFVPCGDLY 109
Query: 295 CYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEG 352
+ + + + V + +ML IA G+E++ Q I H +L NI+L++
Sbjct: 110 HRLLD-----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
KV+ F LS ++ + W APE + +E +E
Sbjct: 165 PVCAKVADFSLSQQSVHSVSGLL----------GNFQWMAPETIGAEE-------ESYTE 207
Query: 413 KADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA-GERPLFPSGSPKYLVNLTKKCW 471
KAD YSF M+ + +LTG+ PF++ K IR G RP P P L N+ + CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 472 HTNPSQRPSFSSICRIL 488
+P +RP FS I + L
Sbjct: 268 SGDPKKRPHFSYIVKEL 284
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 125
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 126 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 179
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 180 L--ARDMLDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 226
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 227 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 284
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 285 FSELVSRISAIFSTFIGEH 303
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 415 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 470
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 471 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 520
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 521 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 567
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 568 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625
Query: 488 LR 489
LR
Sbjct: 626 LR 627
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 31/242 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
+ L AE + M L +P IV+ + G C+ E + LVME+ L+ Y+++ + +N
Sbjct: 416 DELLAEANVMQQLDNPYIVR-MIGICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKN- 471
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+++++ Q++ GM++L H +L N+ L + + K+S FGLS A
Sbjct: 472 -----IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDFGLSKALR 521
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A N A + P WYAPE + + K S K+DV+SFG+L +E +
Sbjct: 522 -ADENYYKAQTHGKW---PVKWYAPECI---------NYYKFSSKSDVWSFGVLMWEAFS 568
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+ P+ ++G ++T + GER P+G P+ + +L CW + RP F+++
Sbjct: 569 YGQKPYRG--MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 626
Query: 488 LR 489
LR
Sbjct: 627 LR 628
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 122
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 123 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 176
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 177 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 223
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 224 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 281
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 282 FSELVSRISAIFSTFIGEH 300
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 125
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 126 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 179
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 180 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 226
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 227 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 284
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 285 FSELVSRISAIFSTFIGEH 303
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 124
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 125 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 178
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 179 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 225
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 226 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 283
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 284 FSELVSRISAIFSTFIGEH 302
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 124
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 125 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 178
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 179 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 225
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 226 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 283
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 284 FSELVSRISAIFSTFIGEH 302
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 183
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 184 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 237
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 238 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 284
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 285 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 342
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 343 FSELVSRISAIFSTFIGEH 361
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 117/257 (45%), Gaps = 36/257 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 123
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 124 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 177
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 178 L--ARDMYDKEX--XSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 224
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 225 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 282
Query: 481 FSS-ICRILRYIKKFMA 496
FS + RI F+
Sbjct: 283 FSELVSRISAIFSTFIG 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 129
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM+FL ++K H +L N L + F VKV+ FG
Sbjct: 130 -NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 183
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 184 L--ARDMYDKEF--DSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 230
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 231 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 288
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 289 FSELVSRISAIFSTFIGEH 307
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 122
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 123 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 176
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 177 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 223
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 224 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 281
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 282 FSELVSRISAIFSTFIGEH 300
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 119
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 120 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 173
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 174 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 220
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 221 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 278
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 279 FSELVSRISAIFSTFIGEH 297
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 123
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 124 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 177
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 178 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 224
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 225 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 282
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 283 FSELVSRISAIFSTFIGEH 301
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 117/257 (45%), Gaps = 36/257 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 142
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 143 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 196
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 197 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 243
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 244 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 301
Query: 481 FSS-ICRILRYIKKFMA 496
FS + RI F+
Sbjct: 302 FSELVSRISAIFSTFIG 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 117/257 (45%), Gaps = 36/257 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 124
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 125 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 178
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 179 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 225
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 226 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 283
Query: 481 FSS-ICRILRYIKKFMA 496
FS + RI F+
Sbjct: 284 FSELVSRISAIFSTFIG 300
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 124
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 125 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 178
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 179 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 225
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 226 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 283
Query: 481 FSS-ICRILRYIKKFMANN 498
FS + RI F+ +
Sbjct: 284 FSELVSRISAIFSTFIGEH 302
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 121
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 122 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 175
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 176 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 222
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 223 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 280
Query: 481 FSSI 484
FS +
Sbjct: 281 FSEL 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
++E+ E M L+HPN++ + E L+ + DL ++R S +RN
Sbjct: 65 QVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR----SPQRN 120
Query: 308 SFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
P V D++ LQ+ARGME+L QK H +L N L F VKV+ FGL
Sbjct: 121 ----PTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES-----FTVKVADFGL- 170
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
AR R Q++ A P W A E S T + + K+DV+SFG+L +
Sbjct: 171 -ARDILDREYYSVQ-QHRHARLPVKWTALE---------SLQTYRFTTKSDVWSFGVLLW 219
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
ELLT G P+ H+ +T + G R P P L + ++CW +P+ RP+F
Sbjct: 220 ELLTRGAPPYR--HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRV 277
Query: 484 IC 485
+
Sbjct: 278 LV 279
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 116
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 117 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 170
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 171 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 217
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 218 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 275
Query: 481 FSSI 484
FS +
Sbjct: 276 FSEL 279
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 117/257 (45%), Gaps = 36/257 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
GE+ E M SHPN++ L G C + +V+ M DL ++R
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLS-LLGICLRSEGSPLVVLPYMKHGDLRNFIR------- 143
Query: 306 RNSFSLPVVVDIM---LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
N P V D++ LQ+A+GM++L ++K H +L N L + F VKV+ FG
Sbjct: 144 -NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK-----FTVKVADFG 197
Query: 363 LSTARTYASRNTPPASPQNQT-APNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
L AR + S N+T A P W A E S T K + K+DV+SFG+
Sbjct: 198 L--ARDMYDKEY--YSVHNKTGAKLPVKWMALE---------SLQTQKFTTKSDVWSFGV 244
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL+T G P+ D + +T + G R L P P L + KCWH RPS
Sbjct: 245 LLWELMTRGAPPYPD--VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS 302
Query: 481 FSS-ICRILRYIKKFMA 496
FS + RI F+
Sbjct: 303 FSELVSRISAIFSTFIG 319
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 37/245 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E+ AE + M +L H +V+ K+ +++ E M+K L +++ GS++
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ-- 281
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA- 366
LP ++D QIA GM F+ + H +L +NI + A + K++ FGL+
Sbjct: 282 --PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-----CKIADFGLARVI 334
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y +R + A P W APE + GS + K+DV+SFG+L
Sbjct: 335 EDNEYTAR---------EGAKFPIKWTAPEAI----NFGSFTI-----KSDVWSFGILLM 376
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E++T G++P+ + ++ + + G R P P+ L N+ +CW P +RP+F
Sbjct: 377 EIVTYGRIPYPG--MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 434
Query: 484 ICRIL 488
I +L
Sbjct: 435 IQSVL 439
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 37/245 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E+ AE + M +L H +V+ K+ +++ E M+K L +++ GS++
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ-- 108
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA- 366
LP ++D QIA GM F+ + H +L +NI + A + K++ FGL+
Sbjct: 109 --PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-----CKIADFGLARVI 161
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y +R + A P W APE + GS + K+DV+SFG+L
Sbjct: 162 EDNEYTAR---------EGAKFPIKWTAPEAI----NFGSFTI-----KSDVWSFGILLM 203
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E++T G++P+ + ++ + + G R P P+ L N+ +CW P +RP+F
Sbjct: 204 EIVTYGRIPYPG--MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 261
Query: 484 ICRIL 488
I +L
Sbjct: 262 IQSVL 266
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 111/256 (43%), Gaps = 53/256 (20%)
Query: 255 EISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRR----RNSF 309
EI + +L H +IV+Y G C D+ +K LVME + GS R R+
Sbjct: 61 EIEILRTLYHEHIVKYK-GCCEDQGEKSVQLVMEYVP----------LGSLRDYLPRHCV 109
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
L ++ QI GM +LHAQ H L N+ L + VK+ FGL+ A
Sbjct: 110 GLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-----VKIGDFGLAKA--- 161
Query: 370 ASRNTPPASPQ---NQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P + +P WYAPE L E K +DV+SFG+ +EL
Sbjct: 162 ----VPEGHEYYRVREDGDSPVFWYAPECLKE---------CKFYYASDVWSFGVTLYEL 208
Query: 427 LT----GKVPFED-----GHLQGD----KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHT 473
LT + P GH QG ++T+ + GER P P + +L K CW T
Sbjct: 209 LTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 268
Query: 474 NPSQRPSFSSICRILR 489
S RP+F ++ IL+
Sbjct: 269 EASFRPTFQNLVPILQ 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 112/258 (43%), Gaps = 57/258 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRR----RNSF 309
EI + +L H +IV+Y G C D+ +K LVME + GS R R+
Sbjct: 60 EIEILRTLYHEHIVKYK-GCCEDQGEKSVQLVMEYVP----------LGSLRDYLPRHCV 108
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA--- 366
L ++ QI GM +LHAQ H L N+ L + VK+ FGL+ A
Sbjct: 109 GLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-----VKIGDFGLAKAVPE 163
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y R + +P WYAPE L E K +DV+SFG+ +
Sbjct: 164 GHEYYRVR---------EDGDSPVFWYAPECLKE---------CKFYYASDVWSFGVTLY 205
Query: 425 ELLT----GKVPFED-----GHLQGD----KMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
ELLT + P GH QG ++T+ + GER P P + +L K CW
Sbjct: 206 ELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCW 265
Query: 472 HTNPSQRPSFSSICRILR 489
T S RP+F ++ IL+
Sbjct: 266 ETEASFRPTFQNLVPILQ 283
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 30/241 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E + SHPNIV+ L G C + K+ ++VMEL+ D ++R T G+R R L +
Sbjct: 162 EARILKQYSHPNIVR-LIGVCTQ-KQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQM 218
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
V D A GME+L ++ H +L N + +++ +K+S FG+S R A
Sbjct: 219 VGDA----AAGMEYLESKCCIHRDLAARNCLVTEKNV-----LKISDFGMS--REEADGV 267
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ Q P W APE L + + S ++DV+SFG+L +E + G P
Sbjct: 268 XAASGGLRQV---PVKWTAPEAL---------NYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ + L + + + G R P P + L ++CW P QRPSFS+I + L+ I+
Sbjct: 316 YPN--LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
Query: 493 K 493
K
Sbjct: 374 K 374
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 33/245 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVFEFMEHGCLSDYLR-----TQRGL 99
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F+ ++ + L + GM +L + H +L N + + +KVS FG++
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQV-----IKVSDFGMT---- 150
Query: 369 YASRNTPPASPQNQTAPN-PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
R + T P W +PEV S S+ S K+DV+SFG+L +E+
Sbjct: 151 ---RFVLDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVF 198
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR 486
+ GK+P+E+ ++ ++I G R P + ++ + CW P RP+FS + R
Sbjct: 199 SEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 487 ILRYI 491
L I
Sbjct: 257 QLAAI 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 32/244 (13%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
+L++ E+ + H NI+ ++ G+ K + +V + S S +
Sbjct: 51 QLQAFKNEVGVLRKTRHVNILLFM-GYS--TKPQLAIVTQWCEG--SSLYHHLHASETK- 104
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F + ++DI Q ARGM++LHA+ I H +L +NI+L + VK+ FGL+T +
Sbjct: 105 -FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-----VKIGDFGLATVK 158
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ S S Q + +W APEV+ Q+ ++ S ++DVY+FG++ +EL+
Sbjct: 159 SRWS-----GSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELM 207
Query: 428 TGKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSF 481
TG++P+ + + D++ + + G L P S PK + L +C +RPSF
Sbjct: 208 TGQLPYSNIN-NRDQIIEMV--GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 264
Query: 482 SSIC 485
I
Sbjct: 265 PRIL 268
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 30/241 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E + SHPNIV+ L G C + K+ ++VMEL+ D ++R T G+R R L +
Sbjct: 162 EARILKQYSHPNIVR-LIGVCTQ-KQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQM 218
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
V D A GME+L ++ H +L N + +++ +K+S FG+S R A
Sbjct: 219 VGDA----AAGMEYLESKCCIHRDLAARNCLVTEKNV-----LKISDFGMS--REEADGV 267
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ Q P W APE L + + S ++DV+SFG+L +E + G P
Sbjct: 268 YAASGGLRQV---PVKWTAPEAL---------NYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ + L + + + G R P P + L ++CW P QRPSFS+I + L+ I+
Sbjct: 316 YPN--LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
Query: 493 K 493
K
Sbjct: 374 K 374
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q ARGM++LHA+ I H +L +NI+L + VK+ FGL+T ++
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-----VKIGDFGLATEKS 171
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ ++ S ++DVY+FG++ +EL+T
Sbjct: 172 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELMT 220
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + + D++ + + G L P S PK + L +C +RPSF
Sbjct: 221 GQLPYSNINNR-DQIIEMV--GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
Query: 483 SIC 485
I
Sbjct: 278 RIL 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 25/183 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q ARGM++LHA+ I H +L +NI+L + VK+ FGL+T ++
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT-----VKIGDFGLATEKS 171
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ ++ S ++DVY+FG++ +EL+T
Sbjct: 172 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------SNPYSFQSDVYAFGIVLYELMT 220
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + + D++ + + G L P S PK + L +C +RPSF
Sbjct: 221 GQLPYSNINNR-DQIIEMV--GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
Query: 483 SIC 485
I
Sbjct: 278 RIL 280
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVFEFMEHGCLSDYLR-----TQRGL 102
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F+ ++ + L + GM +L + H +L N + + +KVS FG++
Sbjct: 103 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-----IKVSDFGMT---- 153
Query: 369 YASRNTPPASPQNQTAPN-PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
R + T P W +PEV S S+ S K+DV+SFG+L +E+
Sbjct: 154 ---RFVLDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVF 201
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR 486
+ GK+P+E+ ++ ++I G R P + ++ + CW P RP+FS + R
Sbjct: 202 SEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 259
Query: 487 ILRYIKK 493
L I +
Sbjct: 260 QLAEIAE 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 41/242 (16%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E+ AE + M +L H +V+ K+ +++ E M+K L +++ GS++
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQ-- 275
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
LP ++D QIA GM F+ + H +L +NI + A + K++ FGL+
Sbjct: 276 --PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV-----CKIADFGLARV- 327
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
A P W APE + GS + K+DV+SFG+L E++
Sbjct: 328 ---------------GAKFPIKWTAPEAI----NFGSFTI-----KSDVWSFGILLMEIV 363
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR 486
T G++P+ + ++ + + G R P P+ L N+ +CW P +RP+F I
Sbjct: 364 TYGRIPYPG--MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 421
Query: 487 IL 488
+L
Sbjct: 422 VL 423
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 57/262 (21%)
Query: 255 EISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRR----RNSF 309
EI + +L H +I++Y G C D+ +K LVME + GS R R+S
Sbjct: 66 EIDILRTLYHEHIIKYK-GCCEDQGEKSLQLVMEYVP----------LGSLRDYLPRHSI 114
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA--- 366
L ++ QI GM +LHAQ H L N+ L + VK+ FGL+ A
Sbjct: 115 GLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRL-----VKIGDFGLAKAVPE 169
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y R + +P WYAPE L E K +DV+SFG+ +
Sbjct: 170 GHEYYRVR---------EDGDSPVFWYAPECLKEY---------KFYYASDVWSFGVTLY 211
Query: 425 ELLTG-------------KVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
ELLT + G + ++T+ + GER P P + +L K CW
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCW 271
Query: 472 HTNPSQRPSFSSICRILRYIKK 493
T S RP+F ++ IL+ + +
Sbjct: 272 ETEASFRPTFENLIPILKTVHE 293
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVFEFMEHGCLSDYLR-----TQRGL 97
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F+ ++ + L + GM +L + H +L N + + +KVS FG++
Sbjct: 98 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-----IKVSDFGMT---- 148
Query: 369 YASRNTPPASPQNQTAPN-PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
R + T P W +PEV S S+ S K+DV+SFG+L +E+
Sbjct: 149 ---RFVLDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVF 196
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR 486
+ GK+P+E+ ++ ++I G R P + ++ + CW P RP+FS + R
Sbjct: 197 SEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
Query: 487 ILRYIKK 493
L I +
Sbjct: 255 QLAEIAE 261
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 113/269 (42%), Gaps = 58/269 (21%)
Query: 255 EISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRR----RNSF 309
EI + +L H +I++Y G C D LVME + GS R R+S
Sbjct: 83 EIDILRTLYHEHIIKYK-GCCEDAGAASLQLVMEYVP----------LGSLRDYLPRHSI 131
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA--- 366
L ++ QI GM +LHAQ H +L N+ L + VK+ FGL+ A
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL-----VKIGDFGLAKAVPE 186
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y R + +P WYAPE L E K +DV+SFG+ +
Sbjct: 187 GHEXYRVR---------EDGDSPVFWYAPECLKEY---------KFYYASDVWSFGVTLY 228
Query: 425 ELLTG-------------KVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
ELLT + G + ++T+ + GER P P + +L K CW
Sbjct: 229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCW 288
Query: 472 HTNPSQRPSFSSICRILRYI-KKFMANNP 499
T S RP+F ++ IL+ + +K+ P
Sbjct: 289 ETEASFRPTFENLIPILKTVHEKYQGQAP 317
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 31/246 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVFEFMEHGCLSDYLR-----TQRGL 99
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F+ ++ + L + GM +L + H +L N + + +KVS FG++
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-----IKVSDFGMTR--- 151
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ + +S + P W +PEV S S+ S K+DV+SFG+L +E+ +
Sbjct: 152 FVLDDQYTSSTGTKF---PVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFS 199
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
GK+P+E+ ++ ++I G R P + ++ + CW P RP+FS + R
Sbjct: 200 EGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 488 LRYIKK 493
L I +
Sbjct: 258 LAEIAE 263
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVTEFMEHGCLSDYLR-----TQRGL 100
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F+ ++ + L + GM +L + H +L N + + +KVS FG++
Sbjct: 101 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-----IKVSDFGMT---- 151
Query: 369 YASRNTPPASPQNQTAPN-PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
R + T P W +PEV S S+ S K+DV+SFG+L +E+
Sbjct: 152 ---RFVLDDQYTSSTGTKFPVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVF 199
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR 486
+ GK+P+E+ ++ ++I G R P + ++ + CW P RP+FS + R
Sbjct: 200 SEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 487 ILRYIKK 493
L I +
Sbjct: 258 QLAEIAE 264
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 111/240 (46%), Gaps = 36/240 (15%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
E+E E + M + HPN+VQ L G C E F++V E M +L Y+RE R
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQ-LLGVCTLEPP-FYIVTEYMPYGNLLDYLREC----NR 124
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+ V++ + QI+ ME+L + H +L N + + VKV+ FGLS
Sbjct: 125 EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHV-----VKVADFGLSRL 179
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T TY + + A P W APE LA + S K+DV++FG+L
Sbjct: 180 MTGDTYTA---------HAGAKFPIKWTAPESLA---------YNTFSIKSDVWAFGVLL 221
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T G P+ L ++ + G R P G P + L + CW +P+ RPSF+
Sbjct: 222 WEIATYGMSPYPGIDLS--QVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFA 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 225 GASSQFKEIQWLGDSFVLRHFYGELE--SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEF 282
GA + +W ++ E E + E+ + ++HPNIV+ L G C
Sbjct: 20 GAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK-LYGAC---LNPV 75
Query: 283 FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK---IYHGELN 339
LVME ++ S Y G+ ++ + LQ ++G+ +LH+ + + H +L
Sbjct: 76 CLVMEY-AEGGSLY-NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLST-ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAE 398
P N+ L A G +K+ FG + +T+ + N A+ W APEV
Sbjct: 134 PPNLLLVA----GGTVLKICDFGTACDIQTHMTNNKGSAA-----------WMAPEVF-- 176
Query: 399 QEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSG 458
EG S SEK DV+S+G++ +E++T + PF++ ++ + G RP
Sbjct: 177 -EG------SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 229
Query: 459 SPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
PK + +L +CW +PSQRPS I +I+ ++ ++
Sbjct: 230 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 31/241 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M+ LSHP +VQ L G C E+ LV E M LS Y+R +R F+
Sbjct: 72 EAEVMMKLSHPKLVQ-LYGVCLEQAP-ICLVFEFMEHGCLSDYLR-----TQRGLFAAET 124
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
++ + L + GM +L + H +L N + + +KVS FG++ + +
Sbjct: 125 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV-----IKVSDFGMTR---FVLDD 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+S + P W +PEV S S+ S K+DV+SFG+L +E+ + GK+P
Sbjct: 177 QYTSSTGTKF---PVKWASPEVF---------SFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+E+ ++ ++I G R P + ++ + CW P RP+FS + R L I
Sbjct: 225 YENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
Query: 493 K 493
+
Sbjct: 283 E 283
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 225 GASSQFKEIQWLGDSFVLRHFYGELE--SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEF 282
GA + +W ++ E E + E+ + ++HPNIV+ L G C
Sbjct: 19 GAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK-LYGAC---LNPV 74
Query: 283 FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK---IYHGELN 339
LVME ++ S Y G+ ++ + LQ ++G+ +LH+ + + H +L
Sbjct: 75 CLVMEY-AEGGSLY-NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLST-ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAE 398
P N+ L A G +K+ FG + +T+ + N A+ W APEV
Sbjct: 133 PPNLLLVA----GGTVLKICDFGTACDIQTHMTNNKGSAA-----------WMAPEVF-- 175
Query: 399 QEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSG 458
EG S SEK DV+S+G++ +E++T + PF++ ++ + G RP
Sbjct: 176 -EG------SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 228
Query: 459 SPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
PK + +L +CW +PSQRPS I +I+ ++ ++
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 57/262 (21%)
Query: 255 EISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRR----RNSF 309
EI + +L H +I++Y G C D+ +K LVME + GS R R+S
Sbjct: 66 EIDILRTLYHEHIIKYK-GCCEDQGEKSLQLVMEYVP----------LGSLRDYLPRHSI 114
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA--- 366
L ++ QI GM +LH+Q H L N+ L + VK+ FGL+ A
Sbjct: 115 GLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRL-----VKIGDFGLAKAVPE 169
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y R + +P WYAPE L E K +DV+SFG+ +
Sbjct: 170 GHEYYRVR---------EDGDSPVFWYAPECLKEY---------KFYYASDVWSFGVTLY 211
Query: 425 ELLTG-------------KVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
ELLT + G + ++T+ + GER P P + +L K CW
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCW 271
Query: 472 HTNPSQRPSFSSICRILRYIKK 493
T S RP+F ++ IL+ + +
Sbjct: 272 ETEASFRPTFENLIPILKTVHE 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 48/258 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCY-------MRETFGSRRRN 307
E++ M L HPNIV ++ + +V E +S+ S Y RE RRR
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVT--QPPNLSIVTEYLSRG-SLYRLLHKSGAREQLDERRRL 140
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFGLS- 364
S + +A+GM +LH + I H L N+ + + + VKV FGLS
Sbjct: 141 SMAY--------DVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK-----YTVKVCDFGLSR 187
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
A T+ S + +P+ W APEVL ++ +EK+DVYSFG++
Sbjct: 188 LKASTFLSSKSAAGTPE---------WMAPEVLRDE---------PSNEKSDVYSFGVIL 229
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAG-ERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+EL T + P+ G+L ++ + +R P + + + CW P +RPSF+
Sbjct: 230 WELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 483 SICRILRYIKKFMANNPD 500
+I +LR + K P+
Sbjct: 288 TIMDLLRPLIKSAVPPPN 305
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 112/263 (42%), Gaps = 38/263 (14%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
L EI + SL H NIV+Y G C ++ L+ME + +RE + + +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEFLP---YGSLRE-YLQKHKE 112
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKVL 167
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 168 PQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYELF 214
Query: 428 TGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWHT 473
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 474 NPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 275 NVNQRPSFRDLALRVDQIRDNMA 297
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFF-LVMELM-SKDLSCYMRETFGSRRR 306
+ L EI + +L H NIV+Y G C E+ L+ME + S L Y+ + +
Sbjct: 67 IADLKKEIEILRNLYHENIVKYK-GICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNK 120
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
N +L + +QI +GM++L +++ H +L N+ + E VK+ FGL+ A
Sbjct: 121 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV-----ESEHQVKIGDFGLTKA 175
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++ +P WYAPE L + SK +DV+SFG+ EL
Sbjct: 176 IETDKEXXTVKDDRD----SPVFWYAPECLMQ---------SKFYIASDVWSFGVTLHEL 222
Query: 427 LT-------------GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHT 473
LT + G + ++ ++ G+R P P + L +KCW
Sbjct: 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
Query: 474 NPSQRPSFSSI 484
PS R SF ++
Sbjct: 283 QPSNRTSFQNL 293
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 111
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 112 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 166
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 167 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 213
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 214 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 273
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 274 NNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFF-LVMELM-SKDLSCYMRETFGSRRR 306
+ L EI + +L H NIV+Y G C E+ L+ME + S L Y+ + +
Sbjct: 55 IADLKKEIEILRNLYHENIVKYK-GICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNK 108
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
N +L + +QI +GM++L +++ H +L N+ +++ VK+ FGL+ A
Sbjct: 109 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVKIGDFGLTKA 163
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++ +P WYAPE L + SK +DV+SFG+ EL
Sbjct: 164 IETDKEXXTVKDDRD----SPVFWYAPECLMQ---------SKFYIASDVWSFGVTLHEL 210
Query: 427 LT-------------GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHT 473
LT + G + ++ ++ G+R P P + L +KCW
Sbjct: 211 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 270
Query: 474 NPSQRPSFSSI 484
PS R SF ++
Sbjct: 271 QPSNRTSFQNL 281
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 62 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 115
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 116 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 170
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 171 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 217
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 218 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 277
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 278 NNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 60 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 113
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 114 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 168
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 169 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 215
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 216 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 275
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 276 NNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 28/251 (11%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRET---- 300
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 301 --FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKV 358
+ ++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+
Sbjct: 131 VPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV-----VKI 185
Query: 359 SGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYS 418
FGL+ Y P + A P W APE + ++ T ++DV+S
Sbjct: 186 XDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWS 231
Query: 419 FGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQ 477
FG+L +E+ + G P+ G ++ + ++ G R P + + CWH PSQ
Sbjct: 232 FGVLLWEIFSLGASPYP-GVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 290
Query: 478 RPSFSSICRIL 488
RP+FS + L
Sbjct: 291 RPTFSELVEHL 301
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 61 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 114
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 115 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 169
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 170 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 216
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 217 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 276
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 277 NNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 54 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 108 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 162
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 163 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 209
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 210 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 269
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 270 NNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 108
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 163
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 164 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 210
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 59 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 112
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 113 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 167
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 168 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 214
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 215 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 274
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 275 NNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 53 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 106
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 107 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 162 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 208
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 209 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 268
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 269 NNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 108
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 163
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 164 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 210
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 86 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 139
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 140 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 194
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 195 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 241
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 242 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 301
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 302 NNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 40/258 (15%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 73 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 127
Query: 305 RRNSF-------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSME 351
+RN F +L ++ Q+A+GMEFL ++K H +L NI L +++
Sbjct: 128 KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV- 186
Query: 352 GYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCS 411
VK+ FGL AR P + A P W APE + ++ T
Sbjct: 187 ----VKICDFGL--ARDIXKD---PDXVRKGDARLPLKWMAPETIFDRVYT--------- 228
Query: 412 EKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKC 470
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + + C
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 287
Query: 471 WHTNPSQRPSFSSICRIL 488
WH PSQRP+FS + L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 126
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 127 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 181
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 182 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 228
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 229 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 288
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 289 NNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + R
Sbjct: 58 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERI 114
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ L + QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 115 DHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 166
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 167 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 213
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 214 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 273
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 274 NNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 54 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 159
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S + + P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 160 YTSS---RGSKFPVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 208 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 53 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 107 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 158
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 159 YTSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 207 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 49 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 102
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 154
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 155 YTSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 203 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 157
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 158 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 206
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F
Sbjct: 207 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP--- 263
Query: 486 RILRYIKKFMANNPDIARS 504
+IL I+ + P I RS
Sbjct: 264 QILASIELLARSLPKIHRS 282
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 28/202 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATEKS 175
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 176 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 224
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + D++ G L P S PK + L +C +RP F
Sbjct: 225 GQLPYSNIN-NRDQII--FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP 281
Query: 483 SICRILRYIKKFMANNPDIARS 504
+IL I+ + P I RS
Sbjct: 282 ---QILASIELLARSLPKIHRS 300
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 69 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 122
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 174
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 175 ETSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 223 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 60 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 113
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 114 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 165
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 166 YTSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 214 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 28/251 (11%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRET---- 300
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 301 --FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKV 358
+ ++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+
Sbjct: 131 VPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV-----VKI 185
Query: 359 SGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYS 418
FGL+ Y P + A P W APE + ++ T ++DV+S
Sbjct: 186 CDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWS 231
Query: 419 FGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQ 477
FG+L +E+ + G P+ G ++ + ++ G R P + + CWH PSQ
Sbjct: 232 FGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 290
Query: 478 RPSFSSICRIL 488
RP+FS + L
Sbjct: 291 RPTFSELVEHL 301
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 54 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 159
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 160 YTSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 208 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 55 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 108
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 163
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 164 LPQDKEFFKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 210
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 41/259 (15%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 72 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 126
Query: 305 RRNSF--------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSM 350
+RN F +L ++ Q+A+GMEFL ++K H +L NI L +++
Sbjct: 127 KRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 351 EGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKC 410
VK+ FGL AR P + A P W APE + ++ T
Sbjct: 187 -----VKICDFGL--ARDIXKD---PDXVRKGDARLPLKWMAPETIFDRVYT-------- 228
Query: 411 SEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKK 469
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + +
Sbjct: 229 -IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 470 CWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 40/264 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 56 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 109
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H L NI ++ + VK+ FGL+
Sbjct: 110 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENEN-----RVKIGDFGLTKV 164
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 165 LPQDKEYYKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 211
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 212 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 271
Query: 473 TNPSQRPSFSSICRILRYIKKFMA 496
N +QRPSF + + I+ MA
Sbjct: 272 NNVNQRPSFRDLALRVDQIRDNMA 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 22/198 (11%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 182
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 183 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 231
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F
Sbjct: 232 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP--- 288
Query: 486 RILRYIKKFMANNPDIAR 503
+IL I+ + P I R
Sbjct: 289 QILASIELLARSLPKIHR 306
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 116
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 176
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL AR P + A P W APE + ++ T
Sbjct: 177 V-----VKICDFGL--ARDIXKD---PDXVRKGDARLPLKWMAPETIFDRVYT------- 219
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ + ++ + ++ G R P + +
Sbjct: 220 --IQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTML 276
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 48/258 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCY-------MRETFGSRRRN 307
E++ M L HPNIV ++ + +V E +S+ S Y RE RRR
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVT--QPPNLSIVTEYLSRG-SLYRLLHKSGAREQLDERRRL 140
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFGLS- 364
S + +A+GM +LH + I H +L N+ + + + VKV FGLS
Sbjct: 141 SMAY--------DVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK-----YTVKVCDFGLSR 187
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
A + +P+ W APEVL ++ +EK+DVYSFG++
Sbjct: 188 LKASXFLXSKXAAGTPE---------WMAPEVLRDE---------PSNEKSDVYSFGVIL 229
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAG-ERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+EL T + P+ G+L ++ + +R P + + + CW P +RPSF+
Sbjct: 230 WELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 483 SICRILRYIKKFMANNPD 500
+I +LR + K P+
Sbjct: 288 TIMDLLRPLIKSAVPPPN 305
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 183
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 184 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 232
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + D++ G L P S PK + L +C +RP F
Sbjct: 233 GQLPYSNIN-NRDQII--FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP 289
Query: 483 SICRILRYIKKFMANNPDIAR 503
+IL I+ + P I R
Sbjct: 290 ---QILASIELLARSLPKIHR 307
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M++LSH +VQ L G C +++ F + + + L Y+RE R+ F +
Sbjct: 69 EAKVMMNLSHEKLVQ-LYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQL 122
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+++ + ME+L +++ H +L N + + + VKVS FGLS Y +
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV-----VKVSDFGLSR---YVLDDE 174
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
+S ++ P W PEVL SK S K+D+++FG+L +E+ + GK+P+
Sbjct: 175 YTSSVGSKF---PVRWSPPEVLM---------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E + ++I G R P + + + + CWH +RP+F
Sbjct: 223 E--RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 125
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL AR P + A P W APE + ++ T
Sbjct: 186 V-----VKICDFGL--ARDIXKD---PDXVRKGDARLPLKWMAPETIFDRVYT------- 228
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + +
Sbjct: 229 --IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 286 DCWHGEPSQRPTFSELVEHL 305
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 40/253 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFC-DEEKKEFFLVMELMS-KDLSCYMRETFGSRRR 306
L EI + SL H NIV+Y G C ++ L+ME + L Y++ + +
Sbjct: 73 LRDFEREIEILKSLQHDNIVKY-KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHK 126
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
++ QI +GME+L ++ H +L NI ++ + VK+ FGL+
Sbjct: 127 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDFGLTKV 181
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
P +P WYAPE L E SK S +DV+SFG++ +EL
Sbjct: 182 LPQDKEXXKVKEP----GESPIFWYAPESLTE---------SKFSVASDVWSFGVVLYEL 228
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--------------PSGSPKYLVNLTKKCWH 472
T + + +M N + G+ +F P G P + + +CW+
Sbjct: 229 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 288
Query: 473 TNPSQRPSFSSIC 485
N +QRPSF +
Sbjct: 289 NNVNQRPSFRDLA 301
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++VME MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVMEYMSKGCLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 22/198 (11%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATEKS 183
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 184 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 232
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F
Sbjct: 233 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP--- 289
Query: 486 RILRYIKKFMANNPDIAR 503
+IL I+ + P I R
Sbjct: 290 QILASIELLARSLPKIHR 307
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + ++ E +LS Y+R
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS----- 116
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 176
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL AR P + A P W APE + ++ T
Sbjct: 177 V-----VKICDFGL--ARDIXKD---PDXVRKGDARLPLKWMAPETIFDRVYT------- 219
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ + ++ + ++ G R P + +
Sbjct: 220 --IQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTML 276
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 125
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 186 V-----VKICDFGLARD-IYKD----PDXVRKGDARLPLKWMAPETIFDRVYT------- 228
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + +
Sbjct: 229 --IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 286 DCWHGEPSQRPTFSELVEHL 305
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 22/198 (11%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 160
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 161 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 209
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP--- 266
Query: 486 RILRYIKKFMANNPDIAR 503
+IL I+ + P I R
Sbjct: 267 QILASIELLARSLPKIHR 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI++ L G + + + + L ++R G F++
Sbjct: 99 SEASIMGQFDHPNIIR-LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQ 152
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ + GM +L H +L N+ + + + KVS FGLS +
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV-----CKVSDFGLSRV----LED 203
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ P W APE +A + S +DV+SFG++ +E+L G+ P
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFR---------TFSSASDVWSFGVVMWEVLAYGERP 254
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + ++ G R P G P L L CWH + +QRP FS I +L
Sbjct: 255 YWN--MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 125
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 186 V-----VKICDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT------- 228
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + +
Sbjct: 229 --IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 286 DCWHGEPSQRPTFSELVEHL 305
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ +L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNII-HLLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 73 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 127
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 128 KRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 187
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 188 V-----VKICDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT------- 230
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ G ++ + ++ G R P + +
Sbjct: 231 --IQSDVWSFGVLLWEIFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 287
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 288 DCWHGEPSQRPTFSELVEHL 307
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 70 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 127
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV----- 182
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 183 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 228
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 229 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 286
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 287 PSQRPTFKQLVEDLDRILTLTTN 309
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 160
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 161 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 209
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F I
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + +++E +LS Y+R
Sbjct: 108 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS----- 162
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 163 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 222
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 223 V-----VKICDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT------- 265
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ + ++ + ++ G R P + +
Sbjct: 266 --IQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTML 322
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 323 DCWHGEPSQRPTFSELVEHL 342
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+L L +E+ M + H NI+ L G C ++ + +V +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 307 NSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
S+ + V V Q+ARGME+L +QK H +L N+ + ++ +
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-----M 196
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K++ FGL+ N + P W APE L ++ T ++DV
Sbjct: 197 KIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSDV 242
Query: 417 YSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNP 475
+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH P
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVP 300
Query: 476 SQRPSFSSICRILRYIKKFMAN 497
SQRP+F + L I N
Sbjct: 301 SQRPTFKQLVEDLDRILTLTTN 322
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + ++ E +LS Y+R
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS----- 116
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 176
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 177 V-----VKICDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT------- 219
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ + ++ + ++ G R P + +
Sbjct: 220 --IQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTML 276
Query: 469 KCWHTNPSQRPSFSSI 484
CWH PSQRP+FS +
Sbjct: 277 DCWHGEPSQRPTFSEL 292
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 25/183 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 155
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 156 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 204
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + D++ G L P S PK + L +C +RP F
Sbjct: 205 GQLPYSNIN-NRDQII--FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP 261
Query: 483 SIC 485
I
Sbjct: 262 QIL 264
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 42/260 (16%)
Query: 246 YGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSR 304
+ E +L +E+ ++ + H V L G C + ++ E +LS Y+R
Sbjct: 62 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS----- 116
Query: 305 RRNSF---------------SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+RN F +L ++ Q+A+GMEFL ++K H +L NI L ++
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 176
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL+ Y P + A P W APE + ++ T
Sbjct: 177 V-----VKICDFGLARD-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT------- 219
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
++DV+SFG+L +E+ + G P+ + ++ + ++ G R P + +
Sbjct: 220 --IQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTML 276
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CWH PSQRP+FS + L
Sbjct: 277 DCWHGEPSQRPTFSELVEHL 296
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 25/183 (13%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATVKS 155
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 156 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 204
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPSFS 482
G++P+ + + D++ G L P S PK + L +C +RP F
Sbjct: 205 GQLPYSNIN-NRDQII--FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP 261
Query: 483 SIC 485
I
Sbjct: 262 QIL 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI++ L G + + + + L ++R G F++
Sbjct: 99 SEASIMGQFDHPNIIR-LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQ 152
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ + GM +L H +L N+ + + + KVS FGLS +
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV-----CKVSDFGLSRV----LED 203
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ P W APE +A + S +DV+SFG++ +E+L G+ P
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFR---------TFSSASDVWSFGVVMWEVLAYGERP 254
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + ++ G R P G P L L CWH + +QRP FS I +L
Sbjct: 255 YWN--MTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 75 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 132
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 187
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 188 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 233
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 234 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 291
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 292 PSQRPTFKQLVEDLDRILTLTTN 314
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 72 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 129
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 184
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 185 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 230
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 231 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 288
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 289 PSQRPTFKQLVEDLDRILTLTTN 311
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V+E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVIEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
F + ++DI Q A+GM++LHA+ I H +L +NI+L VK+ FGL+T ++
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED-----LTVKIGDFGLATEKS 155
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S S Q + +W APEV+ Q+ + S ++DVY+FG++ +EL+T
Sbjct: 156 RWS-----GSHQFEQLSGSILWMAPEVIRMQD------KNPYSFQSDVYAFGIVLYELMT 204
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
G++P+ + + + + R P S PK + L +C +RP F I
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+L L +E+ M + H NI+ L G C ++ + +V +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 307 NSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
S+ + V V Q+ARGME+L +QK H +L N+ + ++ +
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-----M 196
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K++ FGL+ N + P W APE L ++ T ++DV
Sbjct: 197 KIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSDV 242
Query: 417 YSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNP 475
+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH P
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVP 300
Query: 476 SQRPSFSSICRILRYIKKFMAN 497
SQRP+F + L I N
Sbjct: 301 SQRPTFKQLVEDLDRILTLTTN 322
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIT-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E M SH NI++ L G + K + + + L ++RE G FS+
Sbjct: 95 GEAGIMGQFSHHNIIR-LEGVISKYKPMMIITEYMENGALDKFLREKDGE-----FSVLQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ P W APE + S K + +DV+SFG++ +E++T G+ P
Sbjct: 200 DPEATYTTSGGKIPIRWTAPEAI---------SYRKFTSASDVWSFGIVMWEVMTYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + L ++ K I G R P P + L +CW ++RP F+ I IL
Sbjct: 251 YWE--LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSR-- 304
+ ++ E++ + H NI+ L M M+KD L+ + GS
Sbjct: 75 QFQAFRNEVAVLRKTRHVNIL---------------LFMGYMTKDNLAIVTQWCEGSSLY 119
Query: 305 -----RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVS 359
+ F + ++DI Q A+GM++LHA+ I H ++ +NI+L EG VK+
Sbjct: 120 KHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH----EG-LTVKIG 174
Query: 360 GFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
FGL+T ++ S S Q + +W APEV+ Q+ + S ++DVYS+
Sbjct: 175 DFGLATVKSRWS-----GSQQVEQPTGSVLWMAPEVIRMQD------NNPFSFQSDVYSY 223
Query: 420 GMLCFELLTGKVPFEDGHLQG-DKMTKNIRAG----ERPLFPSGSPKYLVNLTKKCWHTN 474
G++ +EL+TG++P+ H+ D++ + G + PK + L C
Sbjct: 224 GIVLYELMTGELPYS--HINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKV 281
Query: 475 PSQRPSFSSICRILRYIKKFMANNPDIAR 503
+RP F +IL I+ + P I R
Sbjct: 282 KEERPLFP---QILSSIELLQHSLPKINR 307
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N P W APE L ++ T ++D
Sbjct: 196 MKIADFGLAR-----DINNIDYYKNTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 186
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 241
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ N + P W APE L ++ T ++D
Sbjct: 242 MKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 287
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 288 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 345
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 346 PSQRPTFKQLVEDLDRILTLTTN 368
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEK-----KEFFLVMELMSKDLSCYMRETFG 302
E+E +E + M SHPN+++ L G C E K ++ + DL Y+ +
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIR-LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL 137
Query: 303 SRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
L ++ M+ IA GME+L + H +L N L+ V V+ FG
Sbjct: 138 ETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD-----MTVCVADFG 192
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
LS + Y+ Q + A P W A E LA++ T K+DV++FG+
Sbjct: 193 LS-KKIYSGD----YYRQGRIAKMPVKWIAIESLADRVYT---------SKSDVWAFGVT 238
Query: 423 CFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ T G P+ +Q +M + G R P L + CW T+P RP+F
Sbjct: 239 MWEIATRGMTPYPG--VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 482 SSICRILRY-IKKFMANNPDI 501
S +LR ++K + + PD+
Sbjct: 297 S----VLRLQLEKLLESLPDV 313
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
Query: 485 CRIL 488
L
Sbjct: 266 QAFL 269
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 130
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 131 PGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 188
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL AR + + + P W APE L ++ T
Sbjct: 189 ---MKIADFGL--ARDIHHIDXXKKTTNGRL---PVKWMAPEALFDRIYT---------H 231
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 103
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 104 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 156
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 157 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 198
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 199 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 256
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRR 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+R
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGM 140
Query: 306 RNSFSLPVV----------VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S+ + V V Q+ARGME+L +QK H +L N+ + ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----- 195
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
++++ FGL+ N + P W APE L ++ T ++D
Sbjct: 196 MRIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT---------HQSD 241
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R P+ L + + CWH
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPG--IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I N
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
Query: 485 CRIL 488
L
Sbjct: 266 QAFL 269
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGCLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 101
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 102 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 154
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 155 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 196
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 197 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 254
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 38/250 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V+E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVIEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL AR
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGL--ARL 163
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Q A P W APE + + + K+DV+SFG+L EL T
Sbjct: 164 IEDNE----XTARQGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTELTT 210
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F
Sbjct: 211 KGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFE----- 263
Query: 488 LRYIKKFMAN 497
Y++ F+ +
Sbjct: 264 --YLQAFLED 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 30/256 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI+ +L G + K + + + L ++R+ G F++
Sbjct: 64 SEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQ 117
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ I GM++L H +L NI + + KVS FG+S +
Sbjct: 118 LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN-----LVCKVSDFGMSRVL----ED 168
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W APE +A ++ T ++ DV+S+G++ +E+++ G+ P
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS---------DVWSYGIVMWEVMSYGERP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ D + + K I G R P P L L CW S RP F I +L
Sbjct: 220 YWD--MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML---D 274
Query: 493 KFMANNPDIARSEFQS 508
K + N + R+ +S
Sbjct: 275 KLIRNPNSLKRTGSES 290
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 279
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL
Sbjct: 280 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLGRLIE 332
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 333 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 374
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 375 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 432
Query: 485 CRIL 488
L
Sbjct: 433 QAFL 436
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 30/256 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI+ +L G + K + + + L ++R+ G F++
Sbjct: 58 SEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQ 111
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ I GM++L H +L NI + + KVS FG+S +
Sbjct: 112 LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN-----LVCKVSDFGMSRVL----ED 162
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W APE +A ++ T ++ DV+S+G++ +E+++ G+ P
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS---------DVWSYGIVMWEVMSYGERP 213
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ D + + K I G R P P L L CW S RP F I +L
Sbjct: 214 YWD--MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML---D 268
Query: 493 KFMANNPDIARSEFQS 508
K + N + R+ +S
Sbjct: 269 KLIRNPNSLKRTGSES 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVCEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 65 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 119
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 120 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 177
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 178 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 220
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 221 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 278
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 279 HAVPSQRPTFKQLVEDLDRIVALTSN 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 61 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 115
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 116 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 173
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 174 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 216
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 217 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 274
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 275 HAVPSQRPTFKQLVEDLDRIVALTSN 300
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 68 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 122
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 123 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 180
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 181 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 223
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 224 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 281
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 282 HAVPSQRPTFKQLVEDLDRIVALTSN 307
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 130
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 131 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 188
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 189 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 231
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI+ +L G + K + + + L ++R+ G F++
Sbjct: 79 SEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-----FTVIQ 132
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ I GM++L H +L NI + + + KVS FG+S +
Sbjct: 133 LVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLV-----CKVSDFGMSRVL----ED 183
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W APE +A ++ T ++ DV+S+G++ +E+++ G+ P
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS---------DVWSYGIVMWEVMSYGERP 234
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ D + + K I G R P P L L CW S RP F I +L
Sbjct: 235 YWD--MSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 69 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 123
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 124 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 181
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 182 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 224
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 225 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 282
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 283 HAVPSQRPTFKQLVEDLDRIVALTSN 308
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M + H +VQ L EE ++V E MSK L +++ G R
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLR-- 112
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 113 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW +P +RP+F +
Sbjct: 208 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265
Query: 485 CRIL 488
L
Sbjct: 266 QAFL 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 130
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 188
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL+ + + P W APE L ++ T
Sbjct: 189 ---MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------H 231
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 66 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQ 119
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + KVS FGLS +
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-----LVCKVSDFGLSRVL----ED 170
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 222 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 66 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 119
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 170
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 222 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLR-- 278
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 331
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 332 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 373
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F +
Sbjct: 374 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
Query: 485 CRIL 488
L
Sbjct: 432 QAFL 435
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLR-- 278
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 331
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 332 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 373
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F +
Sbjct: 374 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
Query: 485 CRIL 488
L
Sbjct: 432 QAFL 435
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 44/253 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLR-- 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 106 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 158
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 159 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 200
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F
Sbjct: 201 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE-- 256
Query: 485 CRILRYIKKFMAN 497
Y++ F+ +
Sbjct: 257 -----YLQAFLED 264
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 93 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 146
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 147 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 197
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 248
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 249 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 31/249 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E S M HPN+V +L G K ++ + + L ++R+ G F++ +
Sbjct: 94 EASIMGQFDHPNVV-HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-----FTVIQL 147
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
V ++ IA GM +L H +L NI + + + KVS FGLS +
Sbjct: 148 VGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLV-----CKVSDFGLSRV----IEDD 198
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
P A P W APE + K + +DV+S+G++ +E+++ G+ P+
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAI---------QYRKFTSASDVWSYGIVMWEVMSYGERPY 249
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKK 493
D + + K I G R P P L L CW ++RP F I IL
Sbjct: 250 WD--MSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL----D 303
Query: 494 FMANNPDIA 502
M NP+ A
Sbjct: 304 KMIRNPNSA 312
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 83 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 136
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + KVS FGLS +
Sbjct: 137 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN-----LVCKVSDFGLSRVL----ED 187
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 188 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 238
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 239 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLR-- 361
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 362 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 414
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 415 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 456
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F +
Sbjct: 457 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 514
Query: 485 CRIL 488
L
Sbjct: 515 QAFL 518
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 436 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKF 486
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + A VK+ FGLS
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-----VKLGDFGLSR-- 539
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 540 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 586
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 587 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E MSK L +++ G R
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVGEYMSKGSLLDFLKGETGKYLR-- 278
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 279 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 331
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 332 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 373
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F +
Sbjct: 374 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431
Query: 485 CRIL 488
L
Sbjct: 432 QAFL 435
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
ES E M L H +VQ L EE ++V E M+K L ++++ G +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQ-LYAVVSEEP--IYIVTEYMNKGSLLDFLKDGEG----RA 101
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP +VD+ Q+A GM ++ H +L +NI + + K++ FGL AR
Sbjct: 102 LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLI-----CKIADFGL--ARL 154
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Q A P W APE + + + K+DV+SFG+L EL+T
Sbjct: 155 IEDNE----XTARQGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTELVT 201
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ + ++ + + G R P P L L CW +P +RP+F +
Sbjct: 202 KGRVPYPG--MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSF 259
Query: 488 LRYIKKFMANNPDIARSE 505
L F A P E
Sbjct: 260 LE--DYFTATEPQYQPGE 275
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 42/266 (15%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR- 305
+L L +E+ M + H NI+ L G C ++ ++++E SK +RE +RR
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKG---NLREYLQARRP 171
Query: 306 -------------RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-- 229
Query: 353 YFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
+K++ FGL AR + + + P W APE L ++ T
Sbjct: 230 ---MKIADFGL--ARDIHHIDYYKKTTNGRL---PVKWMAPEALFDRIYT---------H 272
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
++DV+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CW
Sbjct: 273 QSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW 330
Query: 472 HTNPSQRPSFSSICRILRYIKKFMAN 497
H PSQRP+F + L I +N
Sbjct: 331 HAVPSQRPTFKQLVEDLDRIVALTSN 356
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 38/249 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+ E + E M L +P IV+ L G C E LVME+ F +R
Sbjct: 52 ADTEEMMREAQIMHQLDNPYIVR-LIGVCQAEA--LMLVMEMAGGG----PLHKFLVGKR 104
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V +++ Q++ GM++L + H +L N+ L R + K+S FGLS A
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----YAKISDFGLSKA 159
Query: 367 -----RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
Y +R+ P WYAPE + + K S ++DV+S+G+
Sbjct: 160 LGADDSYYTARSA---------GKWPLKWYAPECI---------NFRKFSSRSDVWSYGV 201
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E L+ G+ P++ ++G ++ I G+R P P L L CW RP
Sbjct: 202 TMWEALSYGQKPYKK--MKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD 259
Query: 481 FSSICRILR 489
F ++ + +R
Sbjct: 260 FLTVEQRMR 268
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGL AR +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGL--ARVL--ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+++ E + M +L H +V+ EE +++ E M+K L +++ G +
Sbjct: 52 VQAFLEEANLMKTLQHDKLVRLYAVVTREEP--IYIITEYMAKGSLLDFLKSDEGGK--- 106
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA- 366
LP ++D QIA GM ++ + H +L +N+ + M K++ FGL+
Sbjct: 107 -VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM-----CKIADFGLARVI 160
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y +R + A P W APE + + + K+DV+SFG+L +
Sbjct: 161 EDNEYTAR---------EGAKFPIKWTAPEAI---------NFGCFTIKSDVWSFGILLY 202
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E++T GK+P+ G D MT + G R P L ++ K CW +RP+F
Sbjct: 203 EIVTYGKIPYP-GRTNADVMTA-LSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDY 260
Query: 484 ICRIL 488
+ +L
Sbjct: 261 LQSVL 265
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFG- 302
+L L +E+ M + H NI+ L G C ++ ++++E SK +L Y+ RE G
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIIN-LLGACTQDGP-LYVIVEYASKGNLREYLQAREPPGL 133
Query: 303 -------SRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH 355
S +V Q+ARGME+L ++K H +L N+ + ++
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----- 188
Query: 356 VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKAD 415
+K++ FGL+ + + P W APE L ++ T ++D
Sbjct: 189 MKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYT---------HQSD 234
Query: 416 VYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTN 474
V+SFG+L +E+ T G P+ + +++ K ++ G R PS L + + CWH
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 475 PSQRPSFSSICRILRYIKKFMAN 497
PSQRP+F + L I +N
Sbjct: 293 PSQRPTFKQLVEDLDRIVALTSN 315
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 36/209 (17%)
Query: 228 SQFKEIQWLGDSFVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME 287
SQF + ++ D+ + F+ E + EIS + SL HPNI++ F E+KK F+LV E
Sbjct: 72 SQFDKGRYSDDNKNIEKFH---EEIYNEISLLKSLDHPNIIKLFDVF--EDKKYFYLVTE 126
Query: 288 LMSKDLSCYMRETFGSR-RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLK 346
E F R+ F +IM QI G+ +LH I H ++ P NI L+
Sbjct: 127 FYEGG------ELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE 180
Query: 347 ARSMEGYFHVKVSGFGLST--ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGS 404
++ ++K+ FGLS+ ++ Y R+ + + APEVL +
Sbjct: 181 NKN--SLLNIKIVDFGLSSFFSKDYKLRDRLGTA----------YYIAPEVLKK------ 222
Query: 405 TSTSKCSEKADVYSFGMLCFELLTGKVPF 433
K +EK DV+S G++ + LL G PF
Sbjct: 223 ----KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 56 EKFLQEALTMRQFDHPHIVK-LIGVITE--NPVWIIMEL------CTLGELRSFLQVRKF 106
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 159
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 160 -YMEDSTXXKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 206
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 207 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 56 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKF 106
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + A VK+ FGLS
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC-----VKLGDFGLSR-- 159
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 160 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 206
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 207 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI++ L G + K + + + L ++R + F++
Sbjct: 95 GEASIMGQFDHPNIIR-LEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQ 148
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGL +
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLGRVL----ED 199
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W +PE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYR---------KFTSASDVWSYGIVLWEVMSYGERP 250
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + + RP F I IL
Sbjct: 251 YWE--MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 436 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKF 486
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 539
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 540 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 586
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 587 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E M+K L +++ G R
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLR-- 109
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 110 --LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 162
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 163 DNEYTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 204
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F +
Sbjct: 205 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 262
Query: 485 CRIL 488
L
Sbjct: 263 QAFL 266
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 58 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKY 108
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 109 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 161
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 162 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 208
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 209 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 53 EKFLQEALTMRQFDHPHIVK-LIGVITE--NPVWIIMEL------CTLGELRSFLQVRKY 103
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 104 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 156
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 157 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 203
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 204 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 59 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKY 109
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 110 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 162
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 163 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 209
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 210 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 61 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKY 111
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 112 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 164
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 165 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 211
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 212 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 56 EKFLQEALTMRQFDHPHIVK-LIGVITE--NPVWIIMEL------CTLGELRSFLQVRKY 106
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 159
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 160 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 206
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 207 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 56 EKFLQEALTMRQFDHPHIVK-LIGVITE--NPVWIIMEL------CTLGELRSFLQVRKY 106
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 159
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 160 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 206
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 207 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRR 305
E+ ++ E+ M L HP +V F DEE + F+V++L+ DL ++++
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLLLGGDLRYHLQQNV---- 110
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
F V + ++ +++L Q+I H ++ P NI L HV ++ F ++
Sbjct: 111 --HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-----HVHITDFNIAA 163
Query: 366 ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
++ T A + PY+ APE+ + ++G G S D +S G+ +E
Sbjct: 164 MLPRETQITTMAGTK------PYM--APEMFSSRKGAGY------SFAVDWWSLGVTAYE 209
Query: 426 LLTGKVPFEDGHLQGDKMTKNI-RAGERPL--FPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
LL G+ P+ H++ +K I E + +PS + +V+L KK NP QR FS
Sbjct: 210 LLRGRRPY---HIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR--FS 264
Query: 483 SICRILRY 490
+ + +
Sbjct: 265 QLSDVQNF 272
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE--TFGSRRRN 307
E E TM HP+IV+ L G E +++MEL C + E +F R+
Sbjct: 84 EKFLQEALTMRQFDHPHIVK-LIGVITENP--VWIIMEL------CTLGELRSFLQVRKY 134
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S L ++ Q++ + +L +++ H ++ N+ + + VK+ FGLS
Sbjct: 135 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSR-- 187
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y +T + + + P W APE S + + + +DV+ FG+ +E+L
Sbjct: 188 -YMEDSTYYKASKGKL---PIKWMAPE---------SINFRRFTSASDVWMFGVCMWEIL 234
Query: 428 T-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
G PF+ ++ + + I GER P P L +L KCW +PS+RP F+ +
Sbjct: 235 MHGVKPFQG--VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 33/243 (13%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS 308
+E + AEI + SL HPNI++ F E+ ++VME R R +
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVF--EDYHNMYIVMETCEGG-ELLERIVSAQARGKA 120
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
S V ++M Q+ + + H+Q + H +L P NI + S + +K+ FGL A
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS--PHSPIKIIDFGL--AEL 176
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ S + A ++ APEV T KC D++S G++ + LLT
Sbjct: 177 FKSDE------HSTNAAGTALYMAPEVFKRD------VTFKC----DIWSAGVVMYFLLT 220
Query: 429 GKVPF-----EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
G +PF E+ + N RPL P V+L K+ +P +RPS +
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA-----VDLLKQMLTKDPERRPSAAQ 275
Query: 484 ICR 486
+
Sbjct: 276 VLH 278
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 166
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + GT + K+DV+SFG+L E
Sbjct: 167 DNEYTAR---------EGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTE 208
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 209 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
Query: 485 CRIL 488
+L
Sbjct: 267 RSVL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 58 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 111 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 165
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + GT + K+DV+SFG+L E
Sbjct: 166 DNEYTAR---------EGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTE 207
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 208 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 265
Query: 485 CRIL 488
+L
Sbjct: 266 RSVL 269
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE +V E MSK L +++ G R
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IXIVTEYMSKGSLLDFLKGETGKYLR-- 102
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL AR
Sbjct: 103 --LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGL--ARL 153
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Q A P W APE + + + K+DV+SFG+L EL T
Sbjct: 154 IEDNE----XTARQGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTELTT 200
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G+VP+ + ++ + G R P P+ L +L +CW P +RP+F
Sbjct: 201 KGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE----- 253
Query: 488 LRYIKKFMAN 497
Y++ F+ +
Sbjct: 254 --YLQAFLED 261
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M + L +++ G +
Sbjct: 63 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 115
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 116 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 170
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + + + K+DV+SFG+L E
Sbjct: 171 DNEYTAR---------EGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLTE 212
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 213 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 270
Query: 485 CRIL 488
+L
Sbjct: 271 RSVL 274
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M + L +++ G +
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 160
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A + A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 161 DAEXTA------REGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 205
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 206 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 488 L 488
L
Sbjct: 264 L 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 48 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 100
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 101 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 155
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + GT + K+DV+SFG+L E
Sbjct: 156 DNEYTAR---------EGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTE 197
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 198 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 255
Query: 485 CRIL 488
+L
Sbjct: 256 RSVL 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL+
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGLARLIE 160
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + GT + K+DV+SFG+L E
Sbjct: 161 DNEYTAR---------EGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTE 202
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 203 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
Query: 485 CRIL 488
+L
Sbjct: 261 RSVL 264
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
E S M HPNI+ +L G + K + + + L ++++ G F++
Sbjct: 72 GEASIMGQFDHPNII-HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-----FTVIQ 125
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ I+ GM++L H +L NI + + + KVS FGLS +
Sbjct: 126 LVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLV-----CKVSDFGLSRVL----ED 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P A+ + P W APE +A + K + +DV+S+G++ +E+++ G+ P
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFR---------KFTSASDVWSYGIVMWEVVSYGERP 227
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + + + K + G R P P L L CW + RP F I +L
Sbjct: 228 YWE--MTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 44/253 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E+ E M L H +VQ L EE ++V E M+K L +++ G R
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLR-- 109
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
LP +VD+ QIA GM ++ H +L +NI + + KV+ FGL+
Sbjct: 110 --LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLV-----CKVADFGLARLIE 162
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
+ +R Q A P W APE + + + K+DV+SFG+L E
Sbjct: 163 DNEWTAR---------QGAKFPIKWTAPE---------AALYGRFTIKSDVWSFGILLTE 204
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L T G+VP+ + ++ + G R P P+ L +L +CW P +RP+F
Sbjct: 205 LTTKGRVPYPG--MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFE-- 260
Query: 485 CRILRYIKKFMAN 497
Y++ F+ +
Sbjct: 261 -----YLQAFLED 268
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+ E + E M L +P IV+ L G C E LVME+ F +R
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVR-LIGVCQAEA--LMLVMEMAGGG----PLHKFLVGKR 430
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ V +++ Q++ GM++L + H L N+ L R + K+S FGLS A
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH-----YAKISDFGLSKA 485
Query: 367 -----RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
Y +R+ P WYAPE + + K S ++DV+S+G+
Sbjct: 486 LGADDSYYTARSA---------GKWPLKWYAPECI---------NFRKFSSRSDVWSYGV 527
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+E L+ G+ P++ ++G ++ I G+R P P L L CW RP
Sbjct: 528 TMWEALSYGQKPYKK--MKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD 585
Query: 481 FSSICRILR 489
F ++ + +R
Sbjct: 586 FLTVEQRMR 594
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
E +E M +L HP+IV+ L G +EE +++MEL +L Y+ R +NS
Sbjct: 54 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ +V LQI + M +L + H ++ NI + + VK+ FGLS R
Sbjct: 106 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC-----VKLGDFGLS--RY 158
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ AS P W +PE S + + + +DV+ F + +E+L+
Sbjct: 159 IEDEDYYKASVTRL----PIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILS 205
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PF L+ + + G+R P P L L +CW +PS RP F+ +
Sbjct: 206 FGKQPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 260
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 34/249 (13%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 65 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 176
Query: 364 S--TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
+ T R + P W APE L ++G +TS+ D++SFG+
Sbjct: 177 TRDIXETDXXR-------KGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGV 220
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ +E+ + + P++ L +++ K + G P P+ + +L + CW NP+ RP+
Sbjct: 221 VLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 481 FSSICRILR 489
F I +L+
Sbjct: 279 FLEIVNLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 34/249 (13%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L + + +VMELM+ DL Y+R N
Sbjct: 62 IEFLN-EASVMKGFTCHHVVRLLG--VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 118
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 173
Query: 364 S--TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
+ T R + P W APE L ++G +TS+ D++SFG+
Sbjct: 174 TRDIXETDXXR-------KGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGV 217
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ +E+ + + P++ L +++ K + G P P+ + +L + CW NP RP+
Sbjct: 218 VLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 275
Query: 481 FSSICRILR 489
F I +L+
Sbjct: 276 FLEIVNLLK 284
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 158
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 159 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 205
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 206 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 488 L 488
L
Sbjct: 264 L 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 54 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 106
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 107 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 159
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 160 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 206
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 207 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 264
Query: 488 L 488
L
Sbjct: 265 L 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
E +E M +L HP+IV+ L G +EE +++MEL +L Y+ R +NS
Sbjct: 70 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 121
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ +V LQI + M +L + H ++ NI + + VK+ FGLS R
Sbjct: 122 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC-----VKLGDFGLS--RY 174
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ AS P W +PE S + + + +DV+ F + +E+L+
Sbjct: 175 IEDEDYYKASVTRL----PIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILS 221
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PF L+ + + G+R P P L L +CW +PS RP F+ +
Sbjct: 222 FGKQPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 276
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNS 308
E +E M +L HP+IV+ L G +EE +++MEL +L Y+ R +NS
Sbjct: 58 EKFMSEAVIMKNLDHPHIVK-LIGIIEEEPT--WIIMELYPYGELGHYLE-----RNKNS 109
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ +V LQI + M +L + H ++ NI + + VK+ FGLS R
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC-----VKLGDFGLS--RY 162
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ AS P W +PE S + + + +DV+ F + +E+L+
Sbjct: 163 IEDEDYYKASVTRL----PIKWMSPE---------SINFRRFTTASDVWMFAVCMWEILS 209
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PF L+ + + G+R P P L L +CW +PS RP F+ +
Sbjct: 210 FGKQPF--FWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 164
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 165 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 211
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 212 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 269
Query: 488 L 488
L
Sbjct: 270 L 270
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 34/249 (13%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 65 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 176
Query: 364 S--TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
+ T R + P W APE L ++G +TS+ D++SFG+
Sbjct: 177 TRDIXETDXXR-------KGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGV 220
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ +E+ + + P++ L +++ K + G P P+ + +L + CW NP RP+
Sbjct: 221 VLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 481 FSSICRILR 489
F I +L+
Sbjct: 279 FLEIVNLLK 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M + L +++ G +
Sbjct: 49 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 101
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-- 366
++ ++D+ QIA GM F+ + H L +NI + K++ FGL+
Sbjct: 102 LTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDT-----LSCKIADFGLARLIE 156
Query: 367 -RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y +R + A P W APE + GT + K+DV+SFG+L E
Sbjct: 157 DNEYTAR---------EGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTE 198
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
++T G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F +
Sbjct: 199 IVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 256
Query: 485 CRIL 488
+L
Sbjct: 257 RSVL 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 55 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 107
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 108 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 160
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 161 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 207
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 208 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 265
Query: 488 L 488
L
Sbjct: 266 L 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M + L +++ G +
Sbjct: 61 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 113
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 114 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 166
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + + + K+DV+SFG+L E++T
Sbjct: 167 IEDNE----XTAREGAKFPIKWTAPEAI---------NYGTFTIKSDVWSFGILLTEIVT 213
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 214 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 271
Query: 488 L 488
L
Sbjct: 272 L 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
ESL E+ + L HPNI++ F E+K F+LV E+ + + + SR+R F
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYT---GGELFDEIISRKR--F 123
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S I+ Q+ G+ ++H KI H +L P N+ L+++S + ++++ FGLST
Sbjct: 124 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTH--- 178
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
AS + + + APEVL GT EK DV+S G++ + LL+G
Sbjct: 179 -----FEASKKMKDKIGTAYYIAPEVL---HGT-------YDEKCDVWSTGVILYILLSG 223
Query: 430 KVPF 433
PF
Sbjct: 224 CPPF 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+++ E + M +L H +V+ EE +++ E M+K L +++ G +
Sbjct: 51 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEP--IYIITEFMAKGSLLDFLKSDEGGK--- 105
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA- 366
LP ++D QIA GM ++ + H +L +N+ + M K++ FGL+
Sbjct: 106 -VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM-----CKIADFGLARVI 159
Query: 367 --RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y +R + A P W APE + + + K++V+SFG+L +
Sbjct: 160 EDNEYTAR---------EGAKFPIKWTAPEAI---------NFGCFTIKSNVWSFGILLY 201
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E++T GK+P+ G D M+ + G R P L ++ K CW +RP+F
Sbjct: 202 EIVTYGKIPYP-GRTNADVMSA-LSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDY 259
Query: 484 ICRIL 488
+ +L
Sbjct: 260 LQSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 105
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 158
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 159 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 205
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 206 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263
Query: 488 L 488
L
Sbjct: 264 L 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
++ AE + M L H +V+ E +++ E M L +++ G +
Sbjct: 62 DAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIK---- 114
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
++ ++D+ QIA GM F+ + H +L +NI + K++ FGL AR
Sbjct: 115 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT-----LSCKIADFGL--ARL 167
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ A P W APE + GT + K+DV+SFG+L E++T
Sbjct: 168 IEDNE----XTAREGAKFPIKWTAPEAI--NYGTFTI-------KSDVWSFGILLTEIVT 214
Query: 429 -GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
G++P+ + ++ +N+ G R + P P+ L L + CW P RP+F + +
Sbjct: 215 HGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 272
Query: 488 L 488
L
Sbjct: 273 L 273
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
ESL E+ + L HPNI++ F E+K F+LV E+ + + + SR+R F
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYT---GGELFDEIISRKR--F 147
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S I+ Q+ G+ ++H KI H +L P N+ L+++S + ++++ FGLST
Sbjct: 148 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTHF-- 203
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
AS + + + APEVL GT EK DV+S G++ + LL+G
Sbjct: 204 ------EASKKMKDKIGTAYYIAPEVL---HGT-------YDEKCDVWSTGVILYILLSG 247
Query: 430 KVPF 433
PF
Sbjct: 248 CPPF 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
ESL E+ + L HPNI++ F E+K F+LV E+ + + + SR+R F
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYT---GGELFDEIISRKR--F 146
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S I+ Q+ G+ ++H KI H +L P N+ L+++S + ++++ FGLST
Sbjct: 147 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTHF-- 202
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
AS + + + APEVL GT EK DV+S G++ + LL+G
Sbjct: 203 ------EASKKMKDKIGTAYYIAPEVL---HGT-------YDEKCDVWSTGVILYILLSG 246
Query: 430 KVPF 433
PF
Sbjct: 247 CPPF 250
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+ FGL+
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-----VKICDFGLAR 246
Query: 366 ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y P + A P W APE + ++ T ++DV+SFG+L +E
Sbjct: 247 D-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWSFGVLLWE 292
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ + G P+ G ++ + ++ G R P + + CWH PSQRP+FS +
Sbjct: 293 IFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 351
Query: 485 CRIL 488
L
Sbjct: 352 VEHL 355
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+ FGL+
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-----VKICDFGLAR 239
Query: 366 ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y P + A P W APE + ++ T ++DV+SFG+L +E
Sbjct: 240 D-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWSFGVLLWE 285
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ + G P+ + ++ + ++ G R P + + CWH PSQRP+FS +
Sbjct: 286 IFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 344
Query: 485 CRIL 488
L
Sbjct: 345 VEHL 348
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
ESL E+ + L HPNI + F E+K F+LV E+ + + + SR+R F
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFF--EDKGYFYLVGEVYT---GGELFDEIISRKR--F 123
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S I+ Q+ G+ + H KI H +L P N+ L+++S + ++++ FGLST
Sbjct: 124 SEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTH--- 178
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
AS + + + APEVL GT EK DV+S G++ + LL+G
Sbjct: 179 -----FEASKKXKDKIGTAYYIAPEVL---HGT-------YDEKCDVWSTGVILYILLSG 223
Query: 430 KVPF 433
PF
Sbjct: 224 CPPF 227
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+ FGL+
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-----VKICDFGLAR 248
Query: 366 ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y P + A P W APE + ++ T ++DV+SFG+L +E
Sbjct: 249 D-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWSFGVLLWE 294
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ + G P+ G ++ + ++ G R P + + CWH PSQRP+FS +
Sbjct: 295 IFSLGASPYP-GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 353
Query: 485 CRIL 488
L
Sbjct: 354 VEHL 357
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 64 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 120
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 121 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 175
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W APE L ++G +TS+ D++SFG++
Sbjct: 176 -TRDIYETD----YYRKGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGVVL 221
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + P++ L +++ K + G P P+ + +L + CW NP RP+F
Sbjct: 222 WEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFL 279
Query: 483 SICRILR 489
I +L+
Sbjct: 280 EIVNLLK 286
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
++ +L ++ Q+A+GMEFL ++K H +L NI L +++ VK+ FGL+
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-----VKICDFGLAR 241
Query: 366 ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFE 425
Y P + A P W APE + ++ T ++DV+SFG+L +E
Sbjct: 242 D-IYKD----PDYVRKGDARLPLKWMAPETIFDRVYT---------IQSDVWSFGVLLWE 287
Query: 426 LLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ + G P+ + ++ + ++ G R P + + CWH PSQRP+FS +
Sbjct: 288 IFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346
Query: 485 CRIL 488
L
Sbjct: 347 VEHL 350
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 65 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 176
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W APE L ++G +TS+ D++SFG++
Sbjct: 177 -TRDIYETD----YYRKGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGVVL 222
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + P++ L +++ K + G P P+ + +L + CW NP RP+F
Sbjct: 223 WEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 483 SICRILR 489
I +L+
Sbjct: 281 EIVNLLK 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 65 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H +L N + F VK+ FG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGM 176
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W APE L ++G +TS+ D++SFG++
Sbjct: 177 -TRDIYET----AYYRKGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGVVL 222
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + P++ L +++ K + G P P+ + +L + CW NP RP+F
Sbjct: 223 WEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 483 SICRILR 489
I +L+
Sbjct: 281 EIVNLLK 287
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 29/233 (12%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLP-- 312
EI + L+HPN+++Y F E E +V+EL M + F ++R +P
Sbjct: 82 EIDLLKQLNHPNVIKYYASFI--EDNELNIVLELADAGDLSRMIKHFKKQKR---LIPER 136
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
V +Q+ +E +H++++ H ++ P+N+++ A + VK+ GL R ++S+
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV-----VKLGDLGL--GRFFSSK 189
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
T S PY + +PE + E + + K+D++S G L +E+ + P
Sbjct: 190 TTAAHS----LVGTPY-YMSPERIHE---------NGYNFKSDIWSLGCLLYEMAALQSP 235
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGS-PKYLVNLTKKCWHTNPSQRPSFSSI 484
F + + K I + P PS + L L C + +P +RP + +
Sbjct: 236 FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 283 FLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ----IARGMEFLHAQKIYHGE 337
++MELM++ DL Y+R N P + M+Q IA GM +L+A K H +
Sbjct: 89 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 148
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPN--PYIWYAPEV 395
L N + F VK+ FG++ R+ + P W +PE
Sbjct: 149 LAARNCMVAED-----FTVKIGDFGMT-------RDIXETDXXRKGGKGLLPVRWMSPES 196
Query: 396 LAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPL 454
L ++G +T + DV+SFG++ +E+ T + P++ L +++ + + G
Sbjct: 197 L--KDGVFTTYS-------DVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLD 245
Query: 455 FPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
P P L+ L + CW NP RPSF I
Sbjct: 246 KPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 65 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H L N + F VK+ FG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-----FTVKIGDFGM 176
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W APE L ++G +TS+ D++SFG++
Sbjct: 177 -TRDIYETD----YYRKGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGVVL 222
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + P++ L +++ K + G P P+ + +L + CW NP+ RP+F
Sbjct: 223 WEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFL 280
Query: 483 SICRILR 489
I +L+
Sbjct: 281 EIVNLLK 287
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
ESL E+ + L HPNI++ F E+K F+LV E+ + + + SR+R F
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYT---GGELFDEIISRKR--F 129
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S I+ Q+ G+ ++H KI H +L P N+ L+++S + ++++ FGLST
Sbjct: 130 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTHF-- 185
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
AS + + + APEVL GT EK DV+S G++ + LL+G
Sbjct: 186 ------EASKKMKDKIGTAYYIAPEVL---HGT-------YDEKCDVWSTGVILYILLSG 229
Query: 430 KVPF 433
PF
Sbjct: 230 CPPF 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + +VMELM+ DL Y+R N
Sbjct: 66 IEFLN-EASVMKGFTCHHVVR-LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENN 122
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A+K H L N + F VK+ FG+
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-----FTVKIGDFGM 177
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W APE L ++G +TS+ D++SFG++
Sbjct: 178 -TRDIYETD----YYRKGGKGLLPVRWMAPESL--KDGVFTTSS-------DMWSFGVVL 223
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + P++ L +++ K + G P P+ + +L + CW NP+ RP+F
Sbjct: 224 WEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFL 281
Query: 483 SICRILR 489
I +L+
Sbjct: 282 EIVNLLK 288
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ M L H NIV L G C + DL ++R +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 307 NSFSLPVVVDIML----QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
P+ + +L Q+A+GM FL ++ H ++ N+ L + K+ FG
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-----AKIGDFG 205
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
L+ S + A P W APE S + ++DV+S+G+L
Sbjct: 206 LARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDCVYTVQSDVWSYGIL 251
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + G L K K ++ G + P+ +PK + ++ + CW P+ RP+F
Sbjct: 252 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 311
Query: 483 SICRILR 489
IC L+
Sbjct: 312 QICSFLQ 318
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 31/232 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E TM+ LSHP +V++ G C +E ++V E +S L Y+R + G S L +
Sbjct: 53 EAQTMMKLSHPKLVKFY-GVCSKEYP-IYIVTEYISNGCLLNYLR-SHGKGLEPSQLLEM 109
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
D+ GM FL + + H +L N L R + VKVS FG++ Y +
Sbjct: 110 CYDV----CEGMAFLESHQFIHRDLAARNC-LVDRDL----CVKVSDFGMTR---YVLDD 157
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+S + P W APEV K S K+DV++FG+L +E+ + GK+P
Sbjct: 158 QYVSSVGTKF---PVKWSAPEVF---------HYFKYSSKSDVWAFGILMWEVFSLGKMP 205
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ D + + + K + G R P + + + CWH P +RP+F +
Sbjct: 206 Y-DLYTNSEVVLK-VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ M L H NIV L G C + DL ++R +
Sbjct: 84 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 307 NSFSLPVVVDIML----QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
P+ + +L Q+A+GM FL ++ H ++ N+ L + K+ FG
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-----AKIGDFG 197
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
L+ S + A P W APE S + ++DV+S+G+L
Sbjct: 198 LARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDCVYTVQSDVWSYGIL 243
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ + + G L K K ++ G + P+ +PK + ++ + CW P+ RP+F
Sbjct: 244 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 303
Query: 483 SICRILR 489
IC L+
Sbjct: 304 QICSFLQ 310
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 34/245 (13%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 67 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 123
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 178
Query: 364 STARTYASRNTPPASPQNQTAPN--PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
+ R+ + P W +PE L ++G +T + DV+SFG+
Sbjct: 179 T-------RDIXETDXXRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGV 222
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ +E+ T + P++ L +++ + + G P P L L + CW NP RPS
Sbjct: 223 VLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 280
Query: 481 FSSIC 485
F I
Sbjct: 281 FLEII 285
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
++ Q+ARGMEFL ++K H +L NI L ++ VK+ FGL AR
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV-----VKICDFGL--ARDIYKN- 252
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
P + P W APE + ++ S K+DV+S+G+L +E+ + G P
Sbjct: 253 --PDYVRKGDTRLPLKWMAPESIFDK---------IYSTKSDVWSYGVLLWEIFSLGGSP 301
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ + D +R G R P S + + CWH +P +RP F+ + L
Sbjct: 302 YPGVQMDED-FCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 60 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 116
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAED-----FTVKIGDFGM 171
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 172 -TRDIYETD----YYRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 217
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L+ L + CW NP RPSF
Sbjct: 218 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFL 275
Query: 483 SIC 485
I
Sbjct: 276 EII 278
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 49/261 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 123
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 170
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 171 ---LPQNDDHXVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 218
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 219 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276
Query: 486 RILRYIKKFMANNPDIARSEF 506
L + P R+EF
Sbjct: 277 DFL------LEAQPTDMRAEF 291
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 49/261 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 123
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 170
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 171 ---LPQNDDHYVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 218
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 219 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 276
Query: 486 RILRYIKKFMANNPDIARSEF 506
L + P R+EF
Sbjct: 277 DFL------LEAQPTDMRAEF 291
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 113
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 168
Query: 369 YAS--RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
Y + T +P + APEVL+++ S + DV+S G + + L
Sbjct: 169 YDGERKKTLCGTPN---------YIAPEVLSKKGH---------SFEVDVWSIGCIMYTL 210
Query: 427 LTGKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 211 LVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 265
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 35/243 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + +L IV+Y + E LVME + S +R+ F R R +
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLP---SGCLRD-FLQRHRARLDASRL 113
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ QI +GME+L +++ H +L NI +++ + HVK++ FGL+
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----HVKIADFGLAKLLPLDKDXX 168
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT---GKV 431
P +P WYAPE S S + S ++DV+SFG++ +EL T
Sbjct: 169 VVREPGQ----SPIFWYAPE---------SLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 215
Query: 432 PFEDGHLQGDKMTKNIRA----------GERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
L+ +++ A G+R P P + L K CW +P RPSF
Sbjct: 216 SPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSF 275
Query: 482 SSI 484
S++
Sbjct: 276 SAL 278
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R + N
Sbjct: 63 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANN 119
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 174
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 175 -TRDIYETDYYR----KGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 220
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 221 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 278
Query: 483 SIC 485
I
Sbjct: 279 EII 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 113
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 168
Query: 369 YAS--RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
Y + T +P + APEVL+++ S + DV+S G + + L
Sbjct: 169 YDGERKKTLCGTPN---------YIAPEVLSKKGH---------SFEVDVWSIGCIMYTL 210
Query: 427 LTGKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 211 LVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 31/250 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK----DLSCYMRETFGSR 304
++ L EI M HPNIV Y F K E +LVM+L+S D+ ++ G
Sbjct: 57 MDELLKEIQAMSQCHHPNIVSYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAK-GEH 113
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
+ + I+ ++ G+E+LH H ++ NI L V+++ FG+S
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-----SVQIADFGVS 168
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
A+ + +T W APEV+ + G KAD++SFG+
Sbjct: 169 A--FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY--------DFKADIWSFGITAI 218
Query: 425 ELLTGKVPFEDG--------HLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPS 476
EL TG P+ LQ D + ++ + K + C +P
Sbjct: 219 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG-KSFRKMISLCLQKDPE 277
Query: 477 QRPSFSSICR 486
+RP+ + + R
Sbjct: 278 KRPTAAELLR 287
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 41/253 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKE----------FFLVMELMSKD-LSCYM- 297
E + E+ + L HP IV+Y + ++ E ++ M+L K+ L +M
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107
Query: 298 -RETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
R T R R+ V + I LQIA +EFLH++ + H +L PSNI+ + V
Sbjct: 108 GRCTIEERERS-----VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-----V 157
Query: 357 KVSGFGLSTARTYASRN----TP-PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCS 411
KV FGL TA TP PA ++ ++ +PE + S
Sbjct: 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE---------QIHGNSYS 208
Query: 412 EKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
K D++S G++ FELL PF + +T PLF P V + +
Sbjct: 209 HKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYV-MVQDML 264
Query: 472 HTNPSQRPSFSSI 484
+P +RP +I
Sbjct: 265 SPSPMERPEAINI 277
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 64 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 120
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 175
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 176 -TRDIYETDYYR----KGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 221
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 222 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 279
Query: 483 SIC 485
I
Sbjct: 280 EII 282
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R + N
Sbjct: 73 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANN 129
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 184
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 185 -TRDIYETDYYR----KGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 230
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 231 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 288
Query: 483 SIC 485
I
Sbjct: 289 EII 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCY---MRETFGSRRRNSFSL 311
E+ M L HPN+++++ G ++K+ F+ + L M + +R SF+
Sbjct: 57 EVKVMRCLEHPNVLKFI-GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
IA GM +LH+ I H +LN N ++ +V V+ FGL AR
Sbjct: 116 --------DIASGMAYLHSMNIIHRDLNSHNCLVRENK-----NVVVADFGL--ARLMVD 160
Query: 372 RNTPPASPQNQTAP----------NPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
T P ++ P NPY W APE++ + EK DV+SFG+
Sbjct: 161 EKTQPEGLRSLKKPDRKKRYTVVGNPY-WMAPEMI---------NGRSYDEKVDVFSFGI 210
Query: 422 LCFELLTGKVPFEDGHL-QGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ E++ G+V + +L + N+R P P +T +C +P +RPS
Sbjct: 211 VLCEII-GRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPS 269
Query: 481 FSSICRILRYIKKFMANN 498
F + L ++ +A +
Sbjct: 270 FVKLEHWLETLRMHLAGH 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 66 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 122
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 177
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 178 -TRDIYETDYYR----KGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 223
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 224 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 483 SIC 485
I
Sbjct: 282 EII 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 66 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 122
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 177
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 178 -TRDIYETD----YYRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 223
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 224 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 483 SIC 485
I
Sbjct: 282 EII 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 60 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 116
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 171
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 172 -TRDIYETD----YYRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 217
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 218 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 275
Query: 483 SIC 485
I
Sbjct: 276 EII 278
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 117
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 118 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 172
Query: 369 YAS--RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
Y + T +P + APEVL+++ S + DV+S G + + L
Sbjct: 173 YDGERKKTLCGTPN---------YIAPEVLSKKGH---------SFEVDVWSIGCIMYTL 214
Query: 427 LTGKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 215 LVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 269
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 67 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 123
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 178
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 179 -TRDIYETD----YYRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 224
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 225 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 282
Query: 483 SIC 485
I
Sbjct: 283 EII 285
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 37/187 (19%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCY-----MRETFGSRRR 306
L E++ + L HPNI++ F E+K+ ++LVME CY E +
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFF--EDKRNYYLVME-------CYKGGELFDEIIHRMKF 133
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
N V++ Q+ G+ +LH I H +L P N+ L+++ + +K+ FGLS
Sbjct: 134 NEVDAAVIIK---QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDAL--IKIVDFGLSA- 187
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
N + TA + APEVL + K EK DV+S G++ F L
Sbjct: 188 ---VFENQKKMKERLGTA----YYIAPEVLRK----------KYDEKCDVWSIGVILFIL 230
Query: 427 LTGKVPF 433
L G PF
Sbjct: 231 LAGYPPF 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 166
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Y PN + APEVL+++ S + DV+S G + + LL
Sbjct: 167 YDGERKKVLC----GTPN---YIAPEVLSKKGH---------SFEVDVWSIGCIMYTLLV 210
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 211 GKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 263
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 117
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 118 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 164
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 165 ---LPQNDDHYVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 212
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 213 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 31/250 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK----DLSCYMRETFGSR 304
++ L EI M HPNIV Y F K E +LVM+L+S D+ ++ G
Sbjct: 52 MDELLKEIQAMSQCHHPNIVSYYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAK-GEH 108
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
+ + I+ ++ G+E+LH H ++ NI L V+++ FG+S
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-----SVQIADFGVS 163
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
A+ + +T W APEV+ + G KAD++SFG+
Sbjct: 164 A--FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY--------DFKADIWSFGITAI 213
Query: 425 ELLTGKVPFEDG--------HLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPS 476
EL TG P+ LQ D + ++ + K + C +P
Sbjct: 214 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG-KSFRKMISLCLQKDPE 272
Query: 477 QRPSFSSICR 486
+RP+ + + R
Sbjct: 273 KRPTAAELLR 282
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR-RRNSF 309
+L E++ + L HPNI++ F E+K+ ++LVME+ E F R F
Sbjct: 50 ALLDEVAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVYRGG------ELFDEIILRQKF 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S IM Q+ G +LH I H +L P N+ L+++S + +K+ FGLS
Sbjct: 102 SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL--IKIVDFGLSAHFEV 159
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ + + YI APEVL + K EK DV+S G++ + LL G
Sbjct: 160 GGK------MKERLGTAYYI--APEVLRK----------KYDEKCDVWSCGVILYILLCG 201
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPS 480
PF G ++ K + G+ P S K LV L PS+R S
Sbjct: 202 YPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLM---LTYEPSKRIS 253
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 113
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 160
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 161 ---LPQNDDHYVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 208
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 209 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 135
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 136 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 190
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Y PN + APEVL+++ S + DV+S G + + LL
Sbjct: 191 YDGERKKVLC----GTPN---YIAPEVLSKKGH---------SFEVDVWSIGCIMYTLLV 234
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 235 GKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 287
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 283 FLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ----IARGMEFLHAQKIYHGE 337
++MELM++ DL Y+R N P + M+Q IA GM +L+A K H +
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 163
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLA 397
L N + F VK+ FG+ T Y + + P W +PE L
Sbjct: 164 LAARNCMVAED-----FTVKIGDFGM-TRDIYETD----YYRKGGKGLLPVRWMSPESL- 212
Query: 398 EQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFP 456
++G +T + DV+SFG++ +E+ T + P++ L +++ + + G P
Sbjct: 213 -KDGVFTTYS-------DVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP 262
Query: 457 SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
P L L + CW NP RPSF I
Sbjct: 263 DNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
+E LN E S M + ++V+ L G + + ++MELM++ DL Y+R N
Sbjct: 95 IEFLN-EASVMKEFNCHHVVR-LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENN 151
Query: 308 SFSLPVVVDIMLQ----IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P + M+Q IA GM +L+A K H +L N + F VK+ FG+
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGM 206
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T Y + + P W +PE L ++G +T + DV+SFG++
Sbjct: 207 -TRDIYETD----YYRKGGKGLLPVRWMSPESL--KDGVFTTYS-------DVWSFGVVL 252
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T + P++ L +++ + + G P P L L + CW NP RPSF
Sbjct: 253 WEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 310
Query: 483 SIC 485
I
Sbjct: 311 EII 313
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 117
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 118 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 164
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 165 ---LPQNDDHYVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 212
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 213 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EIS SL+H ++V + F E+ F+V+EL C R +RR +
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFF--EDNDFVFVVLEL------CRRRSLLELHKRRKA 137
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P + QI G ++LH ++ H +L N++L VK+ FGL+T
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED-----LEVKIGDFGLATKVE 192
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
Y PN + APEVL+++ S + DV+S G + + LL
Sbjct: 193 YDGERKKVLC----GTPN---YIAPEVLSKKGH---------SFEVDVWSIGCIMYTLLV 236
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + + + P + +L +K T+P+ RP+ + +
Sbjct: 237 GKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-----SLIQKMLQTDPTARPTINEL 289
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 113
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 160
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 161 ---LPQNDDHYVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 208
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 209 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E++ M SL H N+++ K +V EL L + + + F L +
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAP--LGSLLDRL--RKHQGHFLLGTL 113
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+Q+A GM +L +++ H +L N+ L R + VK+ FGL A
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----VKIGDFGLMRA-------- 160
Query: 375 PPASPQN-------QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
PQN + P+ W APE S T S +D + FG+ +E+
Sbjct: 161 ---LPQNDDHXVMQEHRKVPFAWCAPE---------SLKTRTFSHASDTWMFGVTLWEMF 208
Query: 428 T-GKVPFEDGHLQGDKMTKNI-RAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
T G+ P+ L G ++ I + GER P P+ + N+ +CW P RP+F ++
Sbjct: 209 TYGQEPWIG--LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L H N++Q + +EEK++ ++VME C M+E S F
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY----CVCGMQEMLDSVPEKRFP 107
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-RTY 369
+ Q+ G+E+LH+Q I H ++ P N+ L +K+S G++ A +
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT-----LKISALGVAEALHPF 162
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
A+ +T S Q A P PE+ G + S K D++S G+ + + TG
Sbjct: 163 AADDTCRTS-QGSPAFQP-----PEI-----ANGLDTFS--GFKVDIWSAGVTLYNITTG 209
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE ++ K+ +NI G + P L +L K P++R S I
Sbjct: 210 LYPFEGDNIY--KLFENIGKGSYAI-PGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + +L IV+Y ++ LVME + S +R+ F R R +
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP---SGCLRD-FLQRHRARLDASRL 116
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA----RTYA 370
+ QI +GME+L +++ H +L NI +++ + HVK++ FGL+ + Y
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----HVKIADFGLAKLLPLDKDYY 171
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-- 428
P SP WYAPE S S + S ++DV+SFG++ +EL T
Sbjct: 172 VVREPGQSP--------IFWYAPE---------SLSDNIFSRQSDVWSFGVVLYELFTYC 214
Query: 429 ---GKVPFEDGHLQGD--------KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQ 477
E + G ++ + + G+R P P + L K CW +P
Sbjct: 215 DKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQD 274
Query: 478 RPSFSSI 484
RPSFS++
Sbjct: 275 RPSFSAL 281
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + +L IV+Y ++ LVME + S +R+ F R R +
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP---SGCLRD-FLQRHRARLDASRL 129
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA----RTYA 370
+ QI +GME+L +++ H +L NI +++ + HVK++ FGL+ + Y
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----HVKIADFGLAKLLPLDKDYY 184
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-- 428
P SP WYAPE S S + S ++DV+SFG++ +EL T
Sbjct: 185 VVREPGQSP--------IFWYAPE---------SLSDNIFSRQSDVWSFGVVLYELFTYC 227
Query: 429 ---GKVPFEDGHLQG--------DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQ 477
E + G ++ + + G+R P P + L K CW +P
Sbjct: 228 DKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQD 287
Query: 478 RPSFSSI 484
RPSFS++
Sbjct: 288 RPSFSAL 294
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET------- 300
EL L +E + + ++HP++++ L G C ++ +V L ++RE+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIK-LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 301 -----------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYL-KAR 348
+ ++ ++ QI++GM++L K+ H +L NI + + R
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 349 SMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTS 408
M K+S FGLS R ++ Q + P W A E L + T
Sbjct: 188 KM------KISDFGLS--RDVYEEDSXVKRSQGRI---PVKWMAIESLFDHIYT------ 230
Query: 409 KCSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLT 467
++DV+SFG+L +E++T G P+ + +++ ++ G R P + + L
Sbjct: 231 ---TQSDVWSFGVLLWEIVTLGGNPYPG--IPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 468 KKCWHTNPSQRPSFSSICRIL 488
+CW P +RP F+ I + L
Sbjct: 286 LQCWKQEPDKRPVFADISKDL 306
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 25/236 (10%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPN++ +L G + + + + L ++R+ G F++
Sbjct: 83 SEASIMGQFDHPNVI-HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQ 136
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H +L NI + + + KVS FGLS R
Sbjct: 137 LVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV-----CKVSDFGLS--RFLEDDT 189
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P P W APE + + K + +DV+S+G++ +E+++ G+ P
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYR---------KFTSASDVWSYGIVMWEVMSYGERP 240
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ D + + I R P P L L CW + + RP F I L
Sbjct: 241 YWD--MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 THEVV-------------TLWYRAPEILL---GXKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E +S DL +M + LP++
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLSMDLKDFM----DASALTGIPLPLI 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + EG +K++ FGL+ A RTY
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EG--AIKLADFGLARAFGVPVRTY 162
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 163 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 201
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 202 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 247
Query: 486 R 486
R
Sbjct: 248 R 248
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKTFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E +S DL +M + LP++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLSMDLKKFM----DASALTGIPLPLI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + EG +K++ FGL+ A RTY
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EG--AIKLADFGLARAFGVPVRTY 161
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 162 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 200
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 201 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 246
Query: 486 R 486
R
Sbjct: 247 R 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E +S DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLSMDLKKFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + EG +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EG--AIKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 109
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGA--IKLADFGLARAFGVPVRTY 164
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 165 THEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 203
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 204 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 249
Query: 486 R 486
R
Sbjct: 250 R 250
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E +S DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLSMDLKDFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + EG +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EG--AIKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EI+ SL +P++V + F D++ ++V+E+ C R +RR +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI------CRRRSLLELHKRRKA 138
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P M Q +G+++LH ++ H +L N++L VK+ FGL+T
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-----MDVKIGDFGLATKIE 193
Query: 369 YAS--RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ + T +P + APEVL ++ S + D++S G + + L
Sbjct: 194 FDGERKKTLCGTPN---------YIAPEVLCKKGH---------SFEVDIWSLGCILYTL 235
Query: 427 LTGKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE L+ ++ KN + R + P S L ++ H +P+ RPS + +
Sbjct: 236 LVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS-----ALIRRMLHADPTLRPSVAEL 290
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPN++ +L G + + + + L ++R+ G F++
Sbjct: 57 SEASIMGQFDHPNVI-HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQ 110
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM++L H L NI + + + KVS FGLS R
Sbjct: 111 LVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLV-----CKVSDFGLS--RFLEDDT 163
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P P W APE + + K + +DV+S+G++ +E+++ G+ P
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYR---------KFTSASDVWSYGIVMWEVMSYGERP 214
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
+ D + + I R P P L L CW + + RP F I L
Sbjct: 215 YWD--MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EI+ SL +P++V + F D++ ++V+E+ C R +RR +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI------CRRRSLLELHKRRKA 122
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P M Q +G+++LH ++ H +L N++L VK+ FGL+T
Sbjct: 123 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-----MDVKIGDFGLATKIE 177
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ PN + APEVL ++ S + D++S G + + LL
Sbjct: 178 FDGERKKDLC----GTPN---YIAPEVLCKKGH---------SFEVDIWSLGCILYTLLV 221
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + R + P S L ++ H +P+ RPS + +
Sbjct: 222 GKPPFETSCLKETYIRIKKNEYSVPRHINPVAS-----ALIRRMLHADPTLRPSVAEL 274
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 112
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 167
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 168 THEVV-------------TLWYRAPEILL---GXKYYSTA-----VDIWSLGCIFAEMVT 206
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 207 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 252
Query: 486 R 486
R
Sbjct: 253 R 253
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 THEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 159
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 160 THEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 198
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 199 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 244
Query: 486 R 486
R
Sbjct: 245 R 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 106 KSYLFQLLQGLSFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVR-- 158
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY APE+L G ST+ D++S G + E++T + F
Sbjct: 159 ------TYTHEVVTLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVTRRALF 204
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSICR 486
G + D++ + R G+P +V W + P +PSF R
Sbjct: 205 P-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWAR 246
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVR-- 158
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY APE+L G ST+ D++S G + E++T + F
Sbjct: 159 ------TYTHEVVTLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVTRRALF 204
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSICR 486
G + D++ + R G+P +V W + P +PSF R
Sbjct: 205 P-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWAR 246
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVR-- 157
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY APE+L G ST+ D++S G + E++T + F
Sbjct: 158 ------TYTHEVVTLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVTRRALF 203
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSICR 486
G + D++ + R G+P +V W + P +PSF R
Sbjct: 204 P-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWAR 245
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 159
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 160 THEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 198
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 199 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 244
Query: 486 R 486
R
Sbjct: 245 R 245
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVR-- 158
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY APE+L G ST+ D++S G + E++T + F
Sbjct: 159 ------TYTHEVVTLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVTRRALF 204
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSICR 486
G + D++ + R G+P +V W + P +PSF R
Sbjct: 205 P-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWAR 246
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET------- 300
EL L +E + + ++HP++++ L G C ++ +V L ++RE+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIK-LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 301 -----------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYL-KAR 348
+ ++ ++ QI++GM++L K+ H +L NI + + R
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR 187
Query: 349 SMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTS 408
M K+S FGLS R ++ Q + P W A E L + T
Sbjct: 188 KM------KISDFGLS--RDVYEEDSYVKRSQGRI---PVKWMAIESLFDHIYT------ 230
Query: 409 KCSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLT 467
++DV+SFG+L +E++T G P+ + +++ ++ G R P + + L
Sbjct: 231 ---TQSDVWSFGVLLWEIVTLGGNPYPG--IPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 468 KKCWHTNPSQRPSFSSICRIL 488
+CW P +RP F+ I + L
Sbjct: 286 LQCWKQEPDKRPVFADISKDL 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EI+ SL +P++V + F D++ ++V+E+ C R +RR +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI------CRRRSLLELHKRRKA 138
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P M Q +G+++LH ++ H +L N++L VK+ FGL+T
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-----MDVKIGDFGLATKIE 193
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ PN + APEVL ++ S + D++S G + + LL
Sbjct: 194 FDGERKKXLC----GTPN---YIAPEVLCKKGH---------SFEVDIWSLGCILYTLLV 237
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + R + P S L ++ H +P+ RPS + +
Sbjct: 238 GKPPFETSCLKETYIRIKKNEYSVPRHINPVAS-----ALIRRMLHADPTLRPSVAEL 290
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 37/238 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG-SRRRNS 308
E ++ EI+ SL +P++V + F D++ ++V+E+ C R +RR +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEI------CRRRSLLELHKRRKA 138
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ P M Q +G+++LH ++ H +L N++L VK+ FGL+T
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD-----MDVKIGDFGLATKIE 193
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ PN + APEVL ++ S + D++S G + + LL
Sbjct: 194 FDGERKKDLC----GTPN---YIAPEVLCKKGH---------SFEVDIWSLGCILYTLLV 237
Query: 429 GKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
GK PFE L+ ++ KN + R + P S L ++ H +P+ RPS + +
Sbjct: 238 GKPPFETSCLKETYIRIKKNEYSVPRHINPVAS-----ALIRRMLHADPTLRPSVAEL 290
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMR-------- 298
E E+L +E+ M L H NIV L G C + DL ++R
Sbjct: 92 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 299 ETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKV 358
+ + ++ S ++ Q+A+GM FL ++ H ++ N+ L + K+
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-----AKI 205
Query: 359 SGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYS 418
FGL+ S + A P W APE S + ++DV+S
Sbjct: 206 GDFGLARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDCVYTVQSDVWS 251
Query: 419 FGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
+G+L +E+ + + G L K K ++ G + P+ +PK + ++ + CW P+ R
Sbjct: 252 YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 311
Query: 479 PSFSSICRILR 489
P+F IC L+
Sbjct: 312 PTFQQICSFLQ 322
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR-RRNSF 309
+L E++ + L HPNI++ F E+K+ ++LVME+ E F R F
Sbjct: 67 ALLDEVAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVYRGG------ELFDEIILRQKF 118
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S IM Q+ G +LH I H +L P N+ L+++S + +K+ FGLS
Sbjct: 119 SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL--IKIVDFGLSAHFEV 176
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ + + YI APEVL + K EK DV+S G++ + LL G
Sbjct: 177 GGKM------KERLGTAYYI--APEVLRK----------KYDEKCDVWSCGVILYILLCG 218
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP------SGSPKYLVNLTKKCWHTNPSQRPS 480
PF G ++ K + G+ P S K LV L PS+R S
Sbjct: 219 YPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLM---LTYEPSKRIS 270
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKDFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVR-- 159
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY APE+L G ST+ D++S G + E++T + F
Sbjct: 160 ------TYTHEVVTLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVTRRALF 205
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSICR 486
G + D++ + R G+P +V W + P +PSF R
Sbjct: 206 P-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWAR 247
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 159
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 160 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 198
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 199 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 244
Query: 486 R 486
R
Sbjct: 245 R 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 43/247 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + +L IV+Y ++ LVME + S +R+ F R R +
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP---SGCLRD-FLQRHRARLDASRL 117
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA----RTYA 370
+ QI +GME+L +++ H +L NI +++ + HVK++ FGL+ + Y
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----HVKIADFGLAKLLPLDKDYY 172
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-- 428
P SP WYAPE S S + S ++DV+SFG++ +EL T
Sbjct: 173 VVREPGQSP--------IFWYAPE---------SLSDNIFSRQSDVWSFGVVLYELFTYC 215
Query: 429 -GKVPFEDGHLQGDKMTKNIRA----------GERPLFPSGSPKYLVNLTKKCWHTNPSQ 477
L+ +++ A G+R P P + L K CW +P
Sbjct: 216 DKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQD 275
Query: 478 RPSFSSI 484
RPSFS++
Sbjct: 276 RPSFSAL 282
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 49/270 (18%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
E E E++ + ++ HPNIVQY F EE ++VM+ C + F +R N
Sbjct: 66 EREESRREVAVLANMKHPNIVQYRESF--EENGSLYIVMDY------CEGGDLF--KRIN 115
Query: 308 S-----FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
+ F ++D +QI ++ +H +KI H ++ NI+L V++ FG
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT-----VQLGDFG 170
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
+ AR S PY + +PE+ + K+D+++ G +
Sbjct: 171 I--ARVLNS----TVELARACIGTPY-YLSPEI---------CENKPYNNKSDIWALGCV 214
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKY---LVNLTKKCWHTNPSQRP 479
+EL T K FE G ++ + I +G FP S Y L +L + + NP RP
Sbjct: 215 LYELCTLKHAFEAGSMKN--LVLKIISGS---FPPVSLHYSYDLRSLVSQLFKRNPRDRP 269
Query: 480 SFSSICR---ILRYIKKFMANNPDIARSEF 506
S +SI I + I+KF++ P + EF
Sbjct: 270 SVNSILEKGFIAKRIEKFLS--PQLIAEEF 297
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 105
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 160
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 161 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 199
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 200 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 245
Query: 486 R 486
R
Sbjct: 246 R 246
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 159
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 160 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 198
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 199 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 244
Query: 486 R 486
R
Sbjct: 245 R 245
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ + L +H NIV L G C + DL ++R R+R
Sbjct: 85 EREALMSELKVLSYLGNHMNIVN-LLGACTIGGPTLVITEYCCYGDLLNFLR-----RKR 138
Query: 307 NSF----SLPVVV-------------DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+SF + P ++ Q+A+GM FL ++ H +L NI L
Sbjct: 139 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 198
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 199 I-----TKICDFGLARDIKNDSNYVVKGN-----ARLPVKWMAPE---------SIFNCV 239
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+ +EL + G P+ G K K I+ G R L P +P + ++ K
Sbjct: 240 YTFESDVWSYGIFLWELFSLGSSPYP-GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 298
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CW +P +RP+F I +++
Sbjct: 299 TCWDADPLKRPTFKQIVQLI 318
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLI---NTEG--AIKLADFGLARAFGVPVRTY 162
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 163 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 201
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 202 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 247
Query: 486 R 486
R
Sbjct: 248 R 248
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 161
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 162 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 200
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 201 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 246
Query: 486 R 486
R
Sbjct: 247 R 247
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 162
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 163 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 201
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 202 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 247
Query: 486 R 486
R
Sbjct: 248 R 248
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ + L +H NIV L G C + DL ++R R+R
Sbjct: 87 EREALMSELKVLSYLGNHMNIVN-LLGACTIGGPTLVITEYCCYGDLLNFLR-----RKR 140
Query: 307 NSF----SLPVVV-------------DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+SF + P ++ Q+A+GM FL ++ H +L NI L
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 200
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 201 I-----TKICDFGLARDIKNDSNYVVKGN-----ARLPVKWMAPE---------SIFNCV 241
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+ +EL + G P+ G K K I+ G R L P +P + ++ K
Sbjct: 242 YTFESDVWSYGIFLWELFSLGSSPYP-GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 300
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CW +P +RP+F I +++
Sbjct: 301 TCWDADPLKRPTFKQIVQLI 320
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 109
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 164
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 165 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 203
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 204 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 249
Query: 486 R 486
R
Sbjct: 250 R 250
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLI---NTEG--AIKLADFGLARAFGVPVRTY 161
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 162 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 200
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 201 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 246
Query: 486 R 486
R
Sbjct: 247 R 247
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 112
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + +K++ FGL+ A RTY
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-----IKLADFGLARAFGVPVRTY 167
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 168 THEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 206
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 207 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 252
Query: 486 R 486
R
Sbjct: 253 R 253
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 107
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 162
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 163 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 201
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 202 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 247
Query: 486 R 486
R
Sbjct: 248 R 248
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEG--AIKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFM----DASALTGIPLPLI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + +K++ FGL+ A RTY
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-----IKLADFGLARAFGVPVRTY 161
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 162 XHEVVT-------------LWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 200
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 201 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 246
Query: 486 R 486
R
Sbjct: 247 R 247
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ + L +H NIV L G C + DL ++R R+R
Sbjct: 92 EREALMSELKVLSYLGNHMNIVN-LLGACTIGGPTLVITEYCCYGDLLNFLR-----RKR 145
Query: 307 NSF----SLPVVV-------------DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+SF + P ++ Q+A+GM FL ++ H +L NI L
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 205
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 206 I-----TKICDFGLARHIKNDSNYVVKGN-----ARLPVKWMAPE---------SIFNCV 246
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+ +EL + G P+ G K K I+ G R L P +P + ++ K
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYP-GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CW +P +RP+F I +++
Sbjct: 306 TCWDADPLKRPTFKQIVQLI 325
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ + L +H NIV L G C + DL ++R R+R
Sbjct: 92 EREALMSELKVLSYLGNHMNIVN-LLGACTIGGPTLVITEYCCYGDLLNFLR-----RKR 145
Query: 307 NSF----SLPVVV-------------DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+SF + P ++ Q+A+GM FL ++ H +L NI L
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 205
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 206 I-----TKICDFGLARDIKNDSNYVVKGN-----ARLPVKWMAPE---------SIFNCV 246
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+ +EL + G P+ G K K I+ G R L P +P + ++ K
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYP-GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CW +P +RP+F I +++
Sbjct: 306 TCWDADPLKRPTFKQIVQLI 325
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEHVHQDLKTFM----DASALTGIPLPLI 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + + EG +K++ FGL+ A RTY
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGA--IKLADFGLARAFGVPVRTY 159
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 160 THEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 198
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 199 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 244
Query: 486 R 486
R
Sbjct: 245 R 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
E E+L +E+ + L +H NIV L G C + DL ++R R+R
Sbjct: 69 EREALMSELKVLSYLGNHMNIVN-LLGACTIGGPTLVITEYCCYGDLLNFLR-----RKR 122
Query: 307 NSF----SLPVVV-------------DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+SF + P ++ Q+A+GM FL ++ H +L NI L
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 182
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 183 I-----TKICDFGLARDIKNDSNYVVKGN-----ARLPVKWMAPE---------SIFNCV 223
Query: 410 CSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+ +EL + G P+ G K K I+ G R L P +P + ++ K
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSPYP-GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 282
Query: 469 KCWHTNPSQRPSFSSICRIL 488
CW +P +RP+F I +++
Sbjct: 283 TCWDADPLKRPTFKQIVQLI 302
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 25/251 (9%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI++ L G L + + L ++R G F++
Sbjct: 66 SEASIMGQFEHPNIIR-LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQ 119
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM +L H +L NI + + + KVS FGLS R +
Sbjct: 120 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLV-----CKVSDFGLS--RFLEENS 172
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P + P W APE +A + K + +D +S+G++ +E+++ G+ P
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAIAFR---------KFTSASDAWSYGIVMWEVMSFGERP 223
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ D + + I R P P L L CW + + RP F + L +
Sbjct: 224 YWD--MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
Query: 493 KFMANNPDIAR 503
+ A+ +AR
Sbjct: 282 RNPASLKIVAR 292
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMR-------- 298
E E+L +E+ M L H NIV L G C + DL ++R
Sbjct: 92 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 299 ETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKV 358
+ + ++ S ++ Q+A+GM FL ++ H ++ N+ L + K+
Sbjct: 151 DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-----AKI 205
Query: 359 SGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYS 418
FGL+ S + A P W APE S + ++DV+S
Sbjct: 206 GDFGLARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDCVYTVQSDVWS 251
Query: 419 FGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
+G+L +E+ + + G L K K ++ G + P+ +PK + ++ + CW P+ R
Sbjct: 252 YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 311
Query: 479 PSFSSICRILR 489
P+F IC L+
Sbjct: 312 PTFQQICSFLQ 322
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 35/194 (18%)
Query: 255 EISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
EI + LS H NIV L + ++ +LV + M DL +R +
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY---- 113
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR- 372
++ Q+ + +++LH+ + H ++ PSNI L A HVKV+ FGLS + R
Sbjct: 114 ---VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC-----HVKVADFGLSRSFVNIRRV 165
Query: 373 --NTPPASPQN-------QTAPNPYI---WY-APEVLAEQEGTGSTSTSKCSEKADVYSF 419
N P + +N Q Y+ WY APE+L GST K ++ D++S
Sbjct: 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL-----LGST---KYTKGIDMWSL 217
Query: 420 GMLCFELLTGKVPF 433
G + E+L GK F
Sbjct: 218 GCILGEILCGKPIF 231
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET------------FG 302
E + M +PNIV+ L G C K L + DL+ ++R
Sbjct: 100 EAALMAEFDNPNIVKLL-GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 303 SRRRNSFSLPVVVD------IMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
+R R S P + I Q+A GM +L +K H +L N + + V
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMV-----V 213
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K++ FGLS R S + A + P W PE S ++ + ++DV
Sbjct: 214 KIADFGLS--RNIYSADYYKADGNDAI---PIRWMPPE---------SIFYNRYTTESDV 259
Query: 417 YSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNP 475
+++G++ +E+ + G P+ + +++ +R G P P L NL + CW P
Sbjct: 260 WAYGVVLWEIFSYGLQPYYG--MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLP 317
Query: 476 SQRPSFSSICRILR 489
+ RPSF SI RIL+
Sbjct: 318 ADRPSFCSIHRILQ 331
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 43/261 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET------- 300
EL L +E + + ++HP++++ L G C ++ +V L ++RE+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIK-LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 301 -----------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYL-KAR 348
+ ++ ++ QI++GM++L + H +L NI + + R
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGR 187
Query: 349 SMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTS 408
M K+S FGLS R ++ Q + P W A E L + T
Sbjct: 188 KM------KISDFGLS--RDVYEEDSXVKRSQGRI---PVKWMAIESLFDHIYT------ 230
Query: 409 KCSEKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLT 467
++DV+SFG+L +E++T G P+ + +++ ++ G R P + + L
Sbjct: 231 ---TQSDVWSFGVLLWEIVTLGGNPYPG--IPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 468 KKCWHTNPSQRPSFSSICRIL 488
+CW P +RP F+ I + L
Sbjct: 286 LQCWKQEPDKRPVFADISKDL 306
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 25/251 (9%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
+E S M HPNI++ L G L + + L ++R G F++
Sbjct: 64 SEASIMGQFEHPNIIR-LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-----FTVIQ 117
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+V ++ IA GM +L H +L NI + + KVS FGLS R +
Sbjct: 118 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN-----LVCKVSDFGLS--RFLEENS 170
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P + P W APE +A ++ T ++ D +S+G++ +E+++ G+ P
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFRKFTSAS---------DAWSYGIVMWEVMSFGERP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ D + + I R P P L L CW + + RP F + L +
Sbjct: 222 YWD--MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
Query: 493 KFMANNPDIAR 503
+ A+ +AR
Sbjct: 280 RNPASLKIVAR 290
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 55/277 (19%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-------LSCYMRETF 301
L+ L E+ M L+HPNIV+ E +K +LVME S +M+E
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKE-- 105
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
R F QI +++ H + I H +L N+ L A ++K++ F
Sbjct: 106 -KEARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADF 150
Query: 362 GLSTARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
G S T+ ++ +T SP PY APE+ ++ G + DV+S G
Sbjct: 151 GFSNEFTFGNKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLG 193
Query: 421 MLCFELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRP 479
++ + L++G +PF DG + + +R R P + S + NL KK NPS+R
Sbjct: 194 VILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKRG 249
Query: 480 SFSSICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
+ I + ++M + D + PL DY D
Sbjct: 250 TLEQIMK-----DRWMNVGHEDDELKPYVEPLPDYKD 281
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L+HPNIV+ L E K +LV E + +DL +M + LP++
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEHVDQDLKKFM----DASALTGIPLPLI 108
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA-----RTY 369
+ Q+ +G+ F H+ ++ H +L P N+ + +K++ FGL+ A RTY
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-----IKLADFGLARAFGVPVRTY 163
Query: 370 ASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+WY APE+L G ST+ D++S G + E++T
Sbjct: 164 XHEVV-------------TLWYRAPEILL---GCKYYSTA-----VDIWSLGCIFAEMVT 202
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW---HTNPSQRPSFSSIC 485
+ F G + D++ + R G+P +V W + P +PSF
Sbjct: 203 RRALFP-GDSEIDQLFRIFRT-------LGTPDEVV------WPGVTSMPDYKPSFPKWA 248
Query: 486 R 486
R
Sbjct: 249 R 249
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 47/261 (18%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMR-------- 298
E E+L +E+ M L H NIV L G C + DL ++R
Sbjct: 92 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 299 ----------ETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKAR 348
E SR FS Q+A+GM FL ++ H ++ N+ L
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSS--------QVAQGMAFLASKNCIHRDVAARNVLLTNG 202
Query: 349 SMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTS 408
+ K+ FGL+ S + A P W APE S
Sbjct: 203 HV-----AKIGDFGLARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDC 243
Query: 409 KCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTK 468
+ ++DV+S+G+L +E+ + + G L K K ++ G + P+ +PK + ++ +
Sbjct: 244 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 303
Query: 469 KCWHTNPSQRPSFSSICRILR 489
CW P+ RP+F IC L+
Sbjct: 304 ACWALEPTHRPTFQQICSFLQ 324
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 248 ELESLNAEISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMR-------- 298
E E+L +E+ M L H NIV L G C + DL ++R
Sbjct: 77 EKEALMSELKIMSHLGQHENIVN-LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 299 ---------ETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
E L ++ Q+A+GM FL ++ H ++ N+ L
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 195
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ K+ FGL+ S + A P W APE S
Sbjct: 196 V-----AKIGDFGLARDIMNDSNYIVKGN-----ARLPVKWMAPE---------SIFDCV 236
Query: 410 CSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKK 469
+ ++DV+S+G+L +E+ + + G L K K ++ G + P+ +PK + ++ +
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA 296
Query: 470 CWHTNPSQRPSFSSICRILR 489
CW P+ RP+F IC L+
Sbjct: 297 CWALEPTHRPTFQQICSFLQ 316
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 38/263 (14%)
Query: 242 LRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETF 301
+RH +L ++ +E+ + SL+H +V+Y + E++ F M + K + +++ +
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEY 96
Query: 302 GSRRR-----NSFSLPVVVD----IMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
R +S +L D + QI + ++H+Q I H +L P NI++
Sbjct: 97 CENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--- 153
Query: 353 YFHVKVSGFGLST-------ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGST 405
+VK+ FGL+ S+N P +S +A ++ A EVL +GTG
Sbjct: 154 --NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL---DGTG-- 206
Query: 406 STSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGER---PLFPSGSPKY 462
+EK D+YS G++ FE++ PF G ++ + K +R+ P F K
Sbjct: 207 ---HYNEKIDMYSLGIIFFEMI---YPFSTG-MERVNILKKLRSVSIEFPPDFDDNKMKV 259
Query: 463 LVNLTKKCWHTNPSQRPSFSSIC 485
+ + +P++RP ++
Sbjct: 260 EKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 49/274 (17%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADFGFS 160
Query: 365 TARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T+ ++ +T SP PY APE+ ++ G + DV+S G++
Sbjct: 161 NEFTFGNKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLGVIL 203
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+ L++G +PF DG + + +R R P + S + NL KK NPS+R +
Sbjct: 204 YTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKRGTLE 259
Query: 483 SICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
I + ++M + D + +PL DY D
Sbjct: 260 QIMK-----DRWMNVGHEDDELKPYVAPLPDYKD 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM-RETFGSRRRNSFSLPV 313
EIS M L H NIV+ E K LV E M DL YM T G+ R L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENK--LTLVFEFMDNDLKKYMDSRTVGNTPR-GLELNL 109
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
V Q+ +G+ F H KI H +L P N+ + R +K+ FGL AR +
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG-----QLKLGDFGL--ARAFG--- 159
Query: 374 TPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
P + ++ +WY AP+VL G+ + STS D++S G + E++TGK
Sbjct: 160 IPVNTFSSEVVT---LWYRAPDVLM---GSRTYSTS-----IDIWSCGCILAEMITGKPL 208
Query: 433 F 433
F
Sbjct: 209 F 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 260 LSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIM 318
L+ HP + C F + K+ F VME ++ DL +++ + F L
Sbjct: 74 LAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSC------HKFDLSRATFYA 125
Query: 319 LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPAS 378
+I G++FLH++ I + +L NI L H+K++ FG+ T
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDG-----HIKIADFGMCKENMLGDAKT---- 176
Query: 379 PQNQTAPNP-YIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N+ P YI APE+L Q K + D +SFG+L +E+L G+ PF H
Sbjct: 177 --NEFCGTPDYI--APEILLGQ---------KYNHSVDWWSFGVLLYEMLIGQSPF---H 220
Query: 438 LQG-DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
Q +++ +IR + P +P K +L K + P +R
Sbjct: 221 GQDEEELFHSIRM-DNPFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 49/274 (17%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADFGFS 160
Query: 365 TARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T+ ++ +T SP PY APE+ ++ G + DV+S G++
Sbjct: 161 NEFTFGNKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLGVIL 203
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+ L++G +PF DG + + +R R P + S + NL KK NPS+R +
Sbjct: 204 YTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKRGTLE 259
Query: 483 SICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
I + ++M + D + PL DY D
Sbjct: 260 QIMK-----DRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 49/274 (17%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADFGFS 160
Query: 365 TARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T+ ++ +T SP PY APE+ ++ G + DV+S G++
Sbjct: 161 NEFTFGNKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLGVIL 203
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+ L++G +PF DG + + +R R P + S + NL KK NPS+R +
Sbjct: 204 YTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKRGTLE 259
Query: 483 SICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
I + ++M + D + PL DY D
Sbjct: 260 QIMK-----DRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
+ L+ EI+ L H NIVQYL F + + F+ ++ LS +R +G + N
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQ 122
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
++ QI G+++LH +I H ++ N+ + S +K+S FG T++
Sbjct: 123 TIGFYTK---QILEGLKYLHDNQIVHRDIKGDNVLINTYSGV----LKISDFG--TSKRL 173
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
A N P +T + APE++ + G K AD++S G E+ TG
Sbjct: 174 AGIN-----PCTETFTGTLQYMAPEIIDK----GPRGYGKA---ADIWSLGCTIIEMATG 221
Query: 430 KVPF-EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
K PF E G Q M K P P KC+ +P +R
Sbjct: 222 KPPFYELGEPQA-AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 50/269 (18%)
Query: 242 LRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMR--- 298
+RH +L ++ +E+ + SL+H +V+Y + E++ F M + K + +++
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEY 96
Query: 299 ------------ETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLK 346
E +R + L QI + ++H+Q I H +L P NI++
Sbjct: 97 CENGTLYDLIHSENLNQQRDEYWRL------FRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 347 ARSMEGYFHVKVSGFGLST-------ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
+VK+ FGL+ S+N P +S +A ++ A EVL
Sbjct: 151 ESR-----NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL--- 202
Query: 400 EGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGER---PLFP 456
+GTG +EK D+YS G++ FE++ PF G ++ + K +R+ P F
Sbjct: 203 DGTG-----HYNEKIDMYSLGIIFFEMI---YPFSTG-MERVNILKKLRSVSIEFPPDFD 253
Query: 457 SGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
K + + +P++RP ++
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 104 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 158
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R+T + + PE++ EG EK D++S G+LC+E
Sbjct: 159 APSSRRDTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 200
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 201 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
+ L+ EI+ L H NIVQYL F + + F+ ++ LS +R +G + N
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQ 108
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
++ QI G+++LH +I H ++ N+ + S +K+S FG T++
Sbjct: 109 TIGFYTK---QILEGLKYLHDNQIVHRDIKGDNVLINTYSGV----LKISDFG--TSKRL 159
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
A N P +T + APE++ + G K AD++S G E+ TG
Sbjct: 160 AGIN-----PCTETFTGTLQYMAPEIIDK----GPRGYGKA---ADIWSLGCTIIEMATG 207
Query: 430 KVPF-EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
K PF E G Q M K P P KC+ +P +R
Sbjct: 208 KPPFYELGEPQA-AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 124
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVHAPSSR 179
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 180 RTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 221
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 222 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 271
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 37/222 (16%)
Query: 260 LSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIM 318
L+ HP + C F + K+ F VME ++ DL +++ + F L
Sbjct: 73 LAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSC------HKFDLSRATFYA 124
Query: 319 LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPAS 378
+I G++FLH++ I + +L NI L H+K++ FG+ T
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDG-----HIKIADFGMCKENMLGDAKT---- 175
Query: 379 PQNQTAPNP-YIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N P YI APE+L Q K + D +SFG+L +E+L G+ PF H
Sbjct: 176 --NXFCGTPDYI--APEILLGQ---------KYNHSVDWWSFGVLLYEMLIGQSPF---H 219
Query: 438 LQG-DKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
Q +++ +IR + P +P K +L K + P +R
Sbjct: 220 GQDEEELFHSIRM-DNPFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM--RETFGSRRRNSFSLP 312
EIS + L HP+I++ + K E +V+E +L Y+ R+ + F
Sbjct: 64 EISYLRLLRHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--- 118
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS- 371
QI +E+ H KI H +L P N+ L + + +VK++ FGLS T +
Sbjct: 119 -----FQQIISAVEYCHRHKIVHRDLKPENLLL-----DEHLNVKIADFGLSNIMTDGNF 168
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
T SP + APEV++ + G + DV+S G++ + +L ++
Sbjct: 169 LKTSCGSPN---------YAAPEVISGKLYAGP--------EVDVWSCGVILYVMLCRRL 211
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSSICR 486
PF+D + + KNI G L PK+L L K+ NP R S I +
Sbjct: 212 PFDDESIP--VLFKNISNGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM--RETFGSRRRNSFSLP 312
EIS + L HP+I++ + K E +V+E +L Y+ R+ + F
Sbjct: 54 EISYLRLLRHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--- 108
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS- 371
QI +E+ H KI H +L P N+ L + + +VK++ FGLS T +
Sbjct: 109 -----FQQIISAVEYCHRHKIVHRDLKPENLLL-----DEHLNVKIADFGLSNIMTDGNF 158
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
T SP + APEV++ + G + DV+S G++ + +L ++
Sbjct: 159 LKTSCGSPN---------YAAPEVISGKLYAGP--------EVDVWSCGVILYVMLCRRL 201
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSSICR 486
PF+D + + KNI G L PK+L L K+ NP R S I +
Sbjct: 202 PFDDESIP--VLFKNISNGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM--RETFGSRRRNSFSLP 312
EIS + L HP+I++ + K E +V+E +L Y+ R+ + F
Sbjct: 63 EISYLRLLRHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--- 117
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS- 371
QI +E+ H KI H +L P N+ L + + +VK++ FGLS T +
Sbjct: 118 -----FQQIISAVEYCHRHKIVHRDLKPENLLL-----DEHLNVKIADFGLSNIMTDGNF 167
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
T SP + APEV++ + G + DV+S G++ + +L ++
Sbjct: 168 LKTSCGSPN---------YAAPEVISGKLYAGP--------EVDVWSCGVILYVMLCRRL 210
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSSICR 486
PF+D + + KNI G L PK+L L K+ NP R S I +
Sbjct: 211 PFDDESIP--VLFKNISNGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM--RETFGSRRRNSFSLP 312
EIS + L HP+I++ + K E +V+E +L Y+ R+ + F
Sbjct: 58 EISYLRLLRHPHIIKLYDVI--KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--- 112
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS- 371
QI +E+ H KI H +L P N+ L + + +VK++ FGLS T +
Sbjct: 113 -----FQQIISAVEYCHRHKIVHRDLKPENLLL-----DEHLNVKIADFGLSNIMTDGNF 162
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
T SP + APEV++ + G + DV+S G++ + +L ++
Sbjct: 163 LKTSCGSPN---------YAAPEVISGKLYAGP--------EVDVWSCGVILYVMLCRRL 205
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSSICR 486
PF+D + + KNI G L PK+L L K+ NP R S I +
Sbjct: 206 PFDDESIP--VLFKNISNGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 37/244 (15%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRR 306
+L+ + EIS M P++V+Y + + + ++VME + +S +R R
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYF--KNTDLWIVMEYCGAGSVSDIIR-----LRN 119
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ + + I+ +G+E+LH + H ++ NI L + EG H K++ FG++
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEG--HAKLADFGVAGQ 174
Query: 367 RT--YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
T A RN +P W APEV+ E G AD++S G+
Sbjct: 175 LTDXMAKRNXVIGTP---------FWMAPEVIQE---IGYNCV------ADIWSLGITAI 216
Query: 425 ELLTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWHTNPSQRPSFS 482
E+ GK P+ D H + I P F P + K+C +P QR + +
Sbjct: 217 EMAEGKPPYADIHPM--RAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATAT 274
Query: 483 SICR 486
+ +
Sbjct: 275 QLLQ 278
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 108 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 162
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE + EG EK D++S G+LC+E
Sbjct: 163 APSSRRTTLCGTLD---------YLPPEXI---EGRXH------DEKVDLWSLGVLCYEF 204
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 205 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 104
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 105 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIANFGWSVH 159
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 160 APSSRRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 201
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 202 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 33/234 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 108
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSCHAPSSR 163
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 164 RTTLSGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEFLVGKP 205
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 206 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 57/278 (20%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADFGFS 160
Query: 365 TARTYASR-----NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
T+ ++ +PP + APE+ ++ G + DV+S
Sbjct: 161 NEFTFGNKLDEFCGSPP-------------YAAPELFQGKKYDGP--------EVDVWSL 199
Query: 420 GMLCFELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQR 478
G++ + L++G +PF DG + + +R R P + S + NL KK NPS+R
Sbjct: 200 GVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKR 255
Query: 479 PSFSSICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
+ I + ++M + D + PL DY D
Sbjct: 256 GTLEQIMK-----DRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV- 313
EI + LSHPNI+ L F K LV + M DL +++ NS L
Sbjct: 62 EIKLLQELSHPNIIGLLDAFG--HKSNISLVFDFMETDLEVIIKD-------NSLVLTPS 112
Query: 314 -VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
+ ML +G+E+LH I H +L P+N+ L + +K++ FGL A+++ S
Sbjct: 113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-----LKLADFGL--AKSFGSP 165
Query: 373 NTPPASPQNQTAPNPYIWY-APEVL--AEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
N + +Q WY APE+L A G G D+++ G + ELL
Sbjct: 166 NR---AYXHQVVTR---WYRAPELLFGARMYGVG----------VDMWAVGCILAELLL- 208
Query: 430 KVPFEDGHLQGDKMTK 445
+VPF G D++T+
Sbjct: 209 RVPFLPGDSDLDQLTR 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 106 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 160
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 161 APSSRRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 202
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 203 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 41/255 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR-RRNSFSLPV 313
E+ + L HPNI++ E+ F++V EL + E F +R FS
Sbjct: 71 EVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGG------ELFDEIIKRKRFSEHD 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
I+ Q+ G+ ++H I H +L P NI L+++ E +K+ FGLST +N
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESK--EKDCDIKIIDFGLSTC---FQQN 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +++ YI APEVL GT EK DV+S G++ + LL+G PF
Sbjct: 178 T---KMKDRIGTAYYI--APEVL---RGT-------YDEKCDVWSAGVILYILLSGTPPF 222
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLV------NLTKKCWHTNPSQRPSFSSICRI 487
G + D + K + G+ + P++ +L +K +PS R + ++ C
Sbjct: 223 Y-GKNEYD-ILKRVETGK---YAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT-ATQCLE 276
Query: 488 LRYIKKFMANNPDIA 502
+I+K+ + P I+
Sbjct: 277 HPWIQKYSSETPTIS 291
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 108 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 162
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 163 APSSRRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 204
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 205 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI+ + P + +Y + + K +++ME + + + E +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEP------GPLDETQI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS--TARTYASR 372
I+ +I +G+++LH++K H ++ +N+ L VK++ FG++ T R
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQIKR 161
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
NT +P W APEV+ + S KAD++S G+ EL G+ P
Sbjct: 162 NTFVGTP---------FWMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPP 203
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR---ILR 489
+ H K+ I P K L + C + PS RP+ + + ILR
Sbjct: 204 HSELHPM--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
Query: 490 YIKK 493
KK
Sbjct: 262 NAKK 265
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 43/261 (16%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
GEL+ E+ + H N+++ L GFC + + + + ++ +RE S+
Sbjct: 70 GELQ-FQTEVEMISMAVHRNLLR-LRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-- 125
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQ---KIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P I L ARG+ +LH KI H ++ +NI L F V FGL
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE-----FEAVVGDFGL 180
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
+ Y + A APE L ST K SEK DV+ +G++
Sbjct: 181 AKLMDYKDXHVXXA------VRGXIGHIAPEYL---------STGKSSEKTDVFGYGVML 225
Query: 424 FELLTGKVPFEDGHLQGD----------------KMTKNIRAGERPLFPSGSPKYLVNLT 467
EL+TG+ F+ L D K+ + + + + L+ +
Sbjct: 226 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 285
Query: 468 KKCWHTNPSQRPSFSSICRIL 488
C ++P +RP S + R+L
Sbjct: 286 LLCTQSSPMERPKMSEVVRML 306
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 39/253 (15%)
Query: 255 EISTMLSLSHPNIVQY--LCGFCDEEKKEFFLVMELMSK-DLSCYMRE--------TFGS 303
E + +L H +IV++ +CG D +V E M DL+ ++R G
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDP----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 304 RR--RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
R + L ++ I QIA GM +L +Q H +L N + A + VK+ F
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL-----VKIGDF 177
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G+S R S + P W PE S K + ++DV+SFG+
Sbjct: 178 GMS--RDVYSTDYYRVGGHTML---PIRWMPPE---------SIMYRKFTTESDVWSFGV 223
Query: 422 LCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
+ +E+ T GK P+ L ++ + I G P PK + ++ CW P QR +
Sbjct: 224 ILWEIFTYGKQPWFQ--LSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLN 281
Query: 481 FSSICRILRYIKK 493
I +IL + K
Sbjct: 282 IKEIYKILHALGK 294
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 43/261 (16%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
GEL+ E+ + H N+++ L GFC + + + + ++ +RE S+
Sbjct: 78 GELQ-FQTEVEMISMAVHRNLLR-LRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-- 133
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQ---KIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
P I L ARG+ +LH KI H ++ +NI L F V FGL
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE-----FEAVVGDFGL 188
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
+ Y + A APE L ST K SEK DV+ +G++
Sbjct: 189 AKLMDYKDXHVXXA------VRGTIGHIAPEYL---------STGKSSEKTDVFGYGVML 233
Query: 424 FELLTGKVPFEDGHLQGD----------------KMTKNIRAGERPLFPSGSPKYLVNLT 467
EL+TG+ F+ L D K+ + + + + L+ +
Sbjct: 234 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVA 293
Query: 468 KKCWHTNPSQRPSFSSICRIL 488
C ++P +RP S + R+L
Sbjct: 294 LLCTQSSPMERPKMSEVVRML 314
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 133
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVHAPSSR 188
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 189 RTTLCGT---------LDYLPPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 230
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 231 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 106 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIANFGWSVH 160
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 161 APSSRRTTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 202
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 203 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 24/181 (13%)
Query: 307 NSFSLPV--VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
N F+LP+ +V M+ IA GME+L ++ H +L N L A M V V+ FGLS
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML-AEDMT----VCVADFGLS 184
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
+ Y+ Q + P W A E LA+ T +DV++FG+ +
Sbjct: 185 R-KIYSGDYYR----QGCASKLPVKWLALESLADNLYT---------VHSDVWAFGVTMW 230
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E++T G+ P+ ++ ++ + G R P + + +L +CW +P QRPSF+
Sbjct: 231 EIMTRGQTPY--AGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTC 288
Query: 484 I 484
+
Sbjct: 289 L 289
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 68 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGXLLDYVRE-----HKDNIGSQY 119
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 174
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 175 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 220
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 221 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 276
Query: 493 KFMANNP 499
MA +P
Sbjct: 277 --MARDP 281
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-MSKDLSCYMRETFGSRR 305
G ++ + E+ L HP+I++ F E+ +LV+E+ + +++ Y++ R
Sbjct: 53 GMVQRVQNEVKIHCQLKHPSILELYNYF--EDSNYVYLVLEMCHNGEMNRYLKN-----R 105
Query: 306 RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
FS M QI GM +LH+ I H +L SN+ L R+M +K++ FGL+T
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL-TRNMN----IKIADFGLAT 160
Query: 366 A--RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
+ T +P + +PE+ + S ++DV+S G +
Sbjct: 161 QLKMPHEKHYTLCGTPN---------YISPEI---------ATRSAHGLESDVWSLGCMF 202
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAG-ERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+ LL G+ PF+ ++ + + K + A E P F S K +L + NP+ R S S
Sbjct: 203 YTLLIGRPPFDTDTVK-NTLNKVVLADYEMPSFLSIEAK---DLIHQLLRRNPADRLSLS 258
Query: 483 SI 484
S+
Sbjct: 259 SV 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 106 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 160
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 161 APSSRRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 202
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 203 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 40/277 (14%)
Query: 248 ELESLNAEISTMLSLSHP-NIVQYLCGFCDEE----KKEFFLVMELM-SKDLSCYMRETF 301
E E + EI+ + SH NI Y F + + +LVME + ++ ++ T
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
G N+ + I +I RG+ LH K+ H ++ N+ L + VK+ F
Sbjct: 123 G----NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-----EVKLVDF 173
Query: 362 GLSTA--RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
G+S RT RNT +P W APEV+A E +T K+D++S
Sbjct: 174 GVSAQLDRTVGRRNTFIGTP---------YWMAPEVIACDENPDATYDF----KSDLWSL 220
Query: 420 GMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGS-PKYLVNLTKKCWHTNPSQR 478
G+ E+ G P D H + I P S K + + C N SQR
Sbjct: 221 GITAIEMAEGAPPLCDMHPM--RALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQR 278
Query: 479 PSFSSICRILRYIKKFMANNPDIARSEFQSPLADYCD 515
P+ + + F+ + P+ + Q L D+ D
Sbjct: 279 PATEQLMK-----HPFIRDQPNERQVRIQ--LKDHID 308
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 157
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 158 APSSRRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI+ + P + +Y + + K +++ME + + + E +
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEP------GPLDETQI 126
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS--TARTYASR 372
I+ +I +G+++LH++K H ++ +N+ L VK++ FG++ T R
Sbjct: 127 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQIKR 181
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
NT +P W APEV+ + S KAD++S G+ EL G+ P
Sbjct: 182 NTFVGTP---------FWMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPP 223
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR---ILR 489
+ H K+ I P K L + C + PS RP+ + + ILR
Sbjct: 224 HSELHPM--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281
Query: 490 YIKK 493
KK
Sbjct: 282 NAKK 285
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 57/278 (20%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAKFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDAD-----MNIKIADFGFS 160
Query: 365 TARTYASR-----NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
T+ ++ PP + APE+ ++ G + DV+S
Sbjct: 161 NEFTFGNKLDAFCGAPP-------------YAAPELFQGKKYDGP--------EVDVWSL 199
Query: 420 GMLCFELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQR 478
G++ + L++G +PF DG + + +R R P + S + NL KK NPS+R
Sbjct: 200 GVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKKFLILNPSKR 255
Query: 479 PSFSSICRILRYIKKFM-ANNPDIARSEFQSPLADYCD 515
+ I + ++M + D + PL DY D
Sbjct: 256 GTLEQIMK-----DRWMNVGHEDDELKPYVEPLPDYKD 288
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 104 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 157
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 158 ------HAPSSRRTDLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 200
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 201 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 49 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 101
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 102 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 157 APSSRRTTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 198
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 199 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 47 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 99
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 100 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVH 154
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 155 APSSRRTTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 196
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 197 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 255 EISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELM--SKDLSCYMRETFGSRRRNSFSL 311
EI +L HPNI+ + ++ K +LV ELM + L +R+ F S R SF
Sbjct: 70 EIEILLRYGQHPNIITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-- 125
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
++ I + +E+LH+Q + H +L PSNI S +++ FG A+ +
Sbjct: 126 -----VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGF--AKQLRA 177
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
N +P + APEVL Q E D++S G+L + +L G
Sbjct: 178 ENGLLMTPCYTAN-----FVAPEVLKRQ---------GYDEGCDIWSLGILLYTMLAGYT 223
Query: 432 PFEDGHLQG-DKMTKNIRAGERPLFPSGSPKYLV-----NLTKKCWHTNPSQR 478
PF +G +++ I +G+ L SG V +L K H +P QR
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTL--SGGNWNTVSETAKDLVSKMLHVDPHQR 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 69 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 120
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 175
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 176 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 222 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 277
Query: 493 KFMANNP 499
MA +P
Sbjct: 278 --MARDP 282
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 33/234 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 111
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVHAPSSR 166
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 167 RTTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEFLVGKP 208
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 209 PFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 74 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 125
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 180
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 181 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 226
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 227 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 282
Query: 493 KFMANNP 499
MA +P
Sbjct: 283 --MARDP 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 39/242 (16%)
Query: 255 EISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSRRRNSFSL 311
EI +L HPNI+ + ++ K ++V ELM L +R+ F S R S
Sbjct: 65 EIEILLRYGQHPNIITLKDVY--DDGKYVYVVTELMKGGELLDKILRQKFFSEREAS--- 119
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
++ I + +E+LHAQ + H +L PSNI L +++ FG A+ +
Sbjct: 120 ----AVLFTITKTVEYLHAQGVVHRDLKPSNI-LYVDESGNPESIRICDFGF--AKQLRA 172
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
N +P + APEVL E++G + D++S G+L + +LTG
Sbjct: 173 ENGLLMTPCYTAN-----FVAPEVL-ERQGYDAA--------CDIWSLGVLLYTMLTGYT 218
Query: 432 PFEDGHLQGDKMTKNI--RAGERPLFPSGSPKYLV-----NLTKKCWHTNPSQRPSFSSI 484
PF +G D + I R G SG V +L K H +P QR + + +
Sbjct: 219 PFANG---PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275
Query: 485 CR 486
R
Sbjct: 276 LR 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 88/228 (38%), Gaps = 34/228 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E+ + L HPN +QY + E +LVME S + + + V
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLE--VHKKPLQEVEIAAV 120
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
LQ G+ +LH+ + H ++ NI L + VK+ FG ++
Sbjct: 121 THGALQ---GLAYLHSHNMIHRDVKAGNILLSEPGL-----VKLGDFGSASI-------- 164
Query: 375 PPASPQNQTAPNPYIWYAPEV-LAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+P N PY W APEV LA EG + K DV+S G+ C EL K P
Sbjct: 165 --MAPANXFVGTPY-WMAPEVILAMDEG-------QYDGKVDVWSLGITCIELAERKPPL 214
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGS-PKYLVNLTKKCWHTNPSQRPS 480
+ + +I E P SG +Y N C P RP+
Sbjct: 215 FN--MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 243 RHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRET- 300
R F GELE L ++ HPNI+ L G C E + +L +E +L ++R++
Sbjct: 70 RDFAGELEVL-CKLG-----HHPNIIN-LLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSR 121
Query: 301 ---------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSME 351
+ ++ S ++ +ARGM++L ++ H +L NI + E
Sbjct: 122 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----E 177
Query: 352 GYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCS 411
Y K++ FGLS + + T P W A E S + S +
Sbjct: 178 NYV-AKIADFGLSRGQEVYVKKT--------MGRLPVRWMAIE---------SLNYSVYT 219
Query: 412 EKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKC 470
+DV+S+G+L +E+++ G P+ + ++ + + G R P + +L ++C
Sbjct: 220 TNSDVWSYGVLLWEIVSLGGTPY--CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 277
Query: 471 WHTNPSQRPSFSSI 484
W P +RPSF+ I
Sbjct: 278 WREKPYERPSFAQI 291
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 157 ------HAPSSRRTDLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 68 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 119
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 174
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 175 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 220
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 221 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 276
Query: 493 KFMANNP 499
MA +P
Sbjct: 277 --MARDP 281
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 70 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 121
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 177 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 222
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 223 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 278
Query: 493 KFMANNP 499
MA +P
Sbjct: 279 --MARDP 283
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 71 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 178 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 223
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 224 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 279
Query: 493 KFMANNP 499
MA +P
Sbjct: 280 --MARDP 284
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRR 305
E + L +E++ + L HPNIV+Y D ++VME DL+ + T G++
Sbjct: 47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKE 104
Query: 306 RNSFSLPVVVDIMLQIARGMEFLH-----AQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
R V+ +M Q+ ++ H + H +L P+N++L +G +VK+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL-----DGKQNVKLGD 159
Query: 361 FGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
FGL+ + + S PY + +PE + + +EK+D++S G
Sbjct: 160 FGLARILNHDT------SFAKTFVGTPY-YMSPEQM---------NRMSYNEKSDIWSLG 203
Query: 421 MLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL PF ++ IR G+ P L + + + RPS
Sbjct: 204 CLLYELCALMPPFT--AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 481 FSSI 484
I
Sbjct: 262 VEEI 265
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 34/260 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M S+ HP++V+ L G C + LV +LM C + + +++ ++
Sbjct: 67 EALIMASMDHPHLVR-LLGVCLSPTIQ--LVTQLMPH--GCLLE--YVHEHKDNIGSQLL 119
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
++ +QIA+GM +L +++ H +L N+ +K+ + HVK++ FGL+ +
Sbjct: 120 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-----HVKITDFGLARLLEGDEKEY 174
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
P W A E + K + ++DV+S+G+ +EL+T G P+
Sbjct: 175 -----NADGGKMPIKWMALECI---------HYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC----RILR 489
DG + ++ + GER P + + KCW + RP F + R+ R
Sbjct: 221 -DG-IPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 278
Query: 490 YIKKFMANNPDIARSEFQSP 509
++++ D R + SP
Sbjct: 279 DPQRYLVIQGD-DRMKLPSP 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 243 RHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRET- 300
R F GELE L ++ HPNI+ L G C E + +L +E +L ++R++
Sbjct: 60 RDFAGELEVL-CKLG-----HHPNIIN-LLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSR 111
Query: 301 ---------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSME 351
+ ++ S ++ +ARGM++L ++ H +L NI + E
Sbjct: 112 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----E 167
Query: 352 GYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCS 411
Y K++ FGLS + + T P W A E S + S +
Sbjct: 168 NYV-AKIADFGLSRGQEVYVKKT--------MGRLPVRWMAIE---------SLNYSVYT 209
Query: 412 EKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKC 470
+DV+S+G+L +E+++ G P+ + ++ + + G R P + +L ++C
Sbjct: 210 TNSDVWSYGVLLWEIVSLGGTPY--CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 267
Query: 471 WHTNPSQRPSFSSI 484
W P +RPSF+ I
Sbjct: 268 WREKPYERPSFAQI 281
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 157 ------HAPSSRRTDLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRR 305
E + L +E++ + L HPNIV+Y D ++VME DL+ + T G++
Sbjct: 47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKE 104
Query: 306 RNSFSLPVVVDIMLQIARGMEFLH-----AQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
R V+ +M Q+ ++ H + H +L P+N++L +G +VK+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL-----DGKQNVKLGD 159
Query: 361 FGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
FGL+ + + S PY + +PE + + +EK+D++S G
Sbjct: 160 FGLARILNHDT------SFAKAFVGTPY-YMSPEQM---------NRMSYNEKSDIWSLG 203
Query: 421 MLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL PF ++ IR G+ P L + + + RPS
Sbjct: 204 CLLYELCALMPPFT--AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 481 FSSI 484
I
Sbjct: 262 VEEI 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 29/180 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR-RRNSFSLPV 313
E+ + L HPNI++ E+ F++V EL + E F +R FS
Sbjct: 71 EVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGG------ELFDEIIKRKRFSEHD 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
I+ Q+ G+ ++H I H +L P NI L+++ + +K+ FGLST +N
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTC---FQQN 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +++ YI APEVL GT EK DV+S G++ + LL+G PF
Sbjct: 178 T---KMKDRIGTAYYI--APEVL---RGT-------YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 315 VDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFGL-STARTYAS 371
V L +ARGM FLH + I LN ++ + M + F S R YA
Sbjct: 114 VKFALDMARGMAFLHTLEPLIPRHALNSRSVMID-EDMTARISMADVKFSFQSPGRMYA- 171
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQ-EGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
PA W APE L ++ E T S AD++SF +L +EL+T +
Sbjct: 172 ----PA------------WVAPEALQKKPEDTNRRS-------ADMWSFAVLLWELVTRE 208
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRIL 488
VPF D M K G RP P G ++ L K C + +P++RP F I IL
Sbjct: 209 VPFADLSNMEIGM-KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 107
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 108 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 162 ------HAPSSRRTDLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 204
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 205 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
++E N E + ++HP I++ F D + + F++M+ + E F R++
Sbjct: 49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDYIEGG------ELFSLLRKS 100
Query: 308 S-FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
F PV ++ +E+LH++ I + +L P NI L H+K++ FG +
Sbjct: 101 QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-----HIKITDFGFA-- 153
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + P+ + APEV+ ST ++ D +SFG+L +E+
Sbjct: 154 -----KYVPDVTYXLCGTPD---YIAPEVV---------STKPYNKSIDWWSFGILIYEM 196
Query: 427 LTGKVPFED 435
L G PF D
Sbjct: 197 LAGYTPFYD 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 29/180 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR-RRNSFSLPV 313
E+ + L HPNI++ E+ F++V EL + E F +R FS
Sbjct: 71 EVELLKKLDHPNIMKLFEIL--EDSSSFYIVGELYTGG------ELFDEIIKRKRFSEHD 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
I+ Q+ G+ ++H I H +L P NI L+++ + +K+ FGLST +N
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTC---FQQN 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +++ YI APEVL GT EK DV+S G++ + LL+G PF
Sbjct: 178 T---KMKDRIGTAYYI--APEVL---RGT-------YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E+S + L H NIV L EK LV E + KDL Y+ + N ++ V
Sbjct: 50 EVSLLKDLKHANIVT-LHDIIHTEKS-LTLVFEYLDKDLKQYLDDC-----GNIINMHNV 102
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ RG+ + H QK+ H +L P N+ + R +K++ FGL+ A++
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-----ELKLADFGLARAKS-----I 152
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
P + N+ +WY P++L GST S + D++ G + +E+ TG+ F
Sbjct: 153 PTKTYDNEVVT---LWYRPPDILL-----GSTDYST---QIDMWGVGCIFYEMATGRPLF 201
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 133
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV------ 182
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
+ P + + Y+ PE++ EG EK D++S G+LC+E L GK
Sbjct: 183 -HAPSSRRDDLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 230
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 231 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 255 EISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELM--SKDLSCYMRETFGSRRRNSFSL 311
EI +L HPNI+ + ++ K +LV ELM + L +R+ F S R SF
Sbjct: 70 EIEILLRYGQHPNIITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-- 125
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
++ I + +E+LH+Q + H +L PSNI S +++ FG A+ +
Sbjct: 126 -----VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGF--AKQLRA 177
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
N +P + APEVL Q E D++S G+L + +L G
Sbjct: 178 ENGLLMTPCYTAN-----FVAPEVLKRQ---------GYDEGCDIWSLGILLYTMLAGYT 223
Query: 432 PFEDGHLQG-DKMTKNIRAGERPLFPSGSPKYLV-----NLTKKCWHTNPSQR 478
PF +G +++ I +G+ L SG V +L K H +P QR
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTL--SGGNWNTVSETAKDLVSKMLHVDPHQR 274
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 106 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 159
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 160 ------HAPSSRRDDLCGTLDYL--PPEMI---EG------RMHDEKVDLWSLGVLCYEF 202
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 203 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + +KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 104
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 105 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 158
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 159 ------HAPSSRRXXLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 201
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 202 LVGKPPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 88/228 (38%), Gaps = 34/228 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E+ + L HPN +QY + E +LVME S + + + V
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLE--VHKKPLQEVEIAAV 159
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
LQ G+ +LH+ + H ++ NI L + VK+ FG ++
Sbjct: 160 THGALQ---GLAYLHSHNMIHRDVKAGNILLSEPGL-----VKLGDFGSASI-------- 203
Query: 375 PPASPQNQTAPNPYIWYAPEV-LAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+P N PY W APEV LA EG + K DV+S G+ C EL K P
Sbjct: 204 --MAPANXFVGTPY-WMAPEVILAMDEG-------QYDGKVDVWSLGITCIELAERKPPL 253
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGS-PKYLVNLTKKCWHTNPSQRPS 480
+ + +I E P SG +Y N C P RP+
Sbjct: 254 FN--MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 107
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +S
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV-HAPSS 161
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 162 RRTELCGTLD--------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 204
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 205 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M S+ HP++V+ L G C + LV +LM C + + +++ ++
Sbjct: 90 EALIMASMDHPHLVR-LLGVCLSPTIQ--LVTQLMPH--GCLLE--YVHEHKDNIGSQLL 142
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
++ +QIA+GM +L +++ H +L N+ +K+ + HVK++ FGL+ +
Sbjct: 143 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-----HVKITDFGLARLLEGDEKEY 197
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
P W A E + + K + ++DV+S+G+ +EL+T G P+
Sbjct: 198 -----NADGGKMPIKWMALECIHYR---------KFTHQSDVWSYGVTIWELMTFGGKPY 243
Query: 434 EDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC----RILR 489
DG + ++ + GER P + + KCW + RP F + R+ R
Sbjct: 244 -DG-IPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 301
Query: 490 YIKKFMANNPDIARSEFQSP 509
++++ D R + SP
Sbjct: 302 DPQRYLVIQGD-DRMKLPSP 320
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 31/180 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPV 313
EI M +PNIV YL + + E ++VME L L+ + ET +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQ------- 117
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ + + + +EFLH+ ++ H ++ NI L M+G VK++ FG + ++
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDG--SVKLTDFG------FCAQI 166
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP S +++ PY W APEV+ + K D++S G++ E++ G+ P+
Sbjct: 167 TPEQSKRSEMVGTPY-WMAPEVVTRK---------AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 77 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 128
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 129 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 183
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 184 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 229
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + +KCW + RP F + I+ + K
Sbjct: 230 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL--IIEFSK 285
Query: 493 KFMANNP 499
MA +P
Sbjct: 286 --MARDP 290
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI+ + P + +Y + + K +++ME + + + E +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEP------GPLDETQI 106
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
I+ +I +G+++LH++K H ++ +N+ L VK++ FG+ A + T
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGV------AGQLT 155
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+N P+ W APEV+ + S KAD++S G+ EL G+ P
Sbjct: 156 DTQIKRNXFVGTPF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHS 205
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR---ILRYI 491
+ H K+ I P K L + C + PS RP+ + + ILR
Sbjct: 206 ELHPM--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
Query: 492 KK 493
KK
Sbjct: 264 KK 265
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 70 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 121
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 177 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 222
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + +KCW + RP F + I+ + K
Sbjct: 223 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL--IIEFSK 278
Query: 493 KFMANNP 499
MA +P
Sbjct: 279 --MARDP 283
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 250 ESLNAEISTMLSLSHPNIV------------QYLCGFCDEEKKEFFLVMELMSKDLSCYM 297
E E L HPN+V + +C FLVM D+
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG--- 113
Query: 298 RETFGSRR-RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
T R +++ P V ++ QIA GME+L + + H +L N+ + + +V
Sbjct: 114 -STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-----LNV 167
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K+S GL YA+ + P W APE + K S +D+
Sbjct: 168 KISDLGLFR-EVYAADYYKLLG----NSLLPIRWMAPEAIM---------YGKFSIDSDI 213
Query: 417 YSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPS 476
+S+G++ +E+ + + G+ D + + IR + P P ++ L +CW+ PS
Sbjct: 214 WSYGVVLWEVFSYGLQPYCGYSNQD-VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPS 272
Query: 477 QRPSFSSICRILR 489
+RP F I LR
Sbjct: 273 RRPRFKDIHSRLR 285
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+SR T + + PE++ EG EK D++S G+LC+E
Sbjct: 157 HAPSSRRTXLCGTLD--------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 243 RHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRET- 300
R F GELE L ++ HPNI+ L G C E + +L +E +L ++R++
Sbjct: 67 RDFAGELEVL-CKLG-----HHPNIIN-LLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSR 118
Query: 301 ---------FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSME 351
+ ++ S ++ +ARGM++L ++ H L NI + E
Sbjct: 119 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG----E 174
Query: 352 GYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCS 411
Y K++ FGLS + + T P W A E S + S +
Sbjct: 175 NYV-AKIADFGLSRGQEVYVKKT--------MGRLPVRWMAIE---------SLNYSVYT 216
Query: 412 EKADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKC 470
+DV+S+G+L +E+++ G P+ + ++ + + G R P + +L ++C
Sbjct: 217 TNSDVWSYGVLLWEIVSLGGTPY--CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 274
Query: 471 WHTNPSQRPSFSSI 484
W P +RPSF+ I
Sbjct: 275 WREKPYERPSFAQI 288
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI+ + P + +Y + + K +++ME + + + E +
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEP------GPLDETQI 121
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
I+ +I +G+++LH++K H ++ +N+ L VK++ FG+ A + T
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGV------AGQLT 170
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+N P+ W APEV+ + S KAD++S G+ EL G+ P
Sbjct: 171 DTQIKRNXFVGTPF-WMAPEVIKQ---------SAYDSKADIWSLGITAIELARGEPPHS 220
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR---ILRYI 491
+ H K+ I P K L + C + PS RP+ + + ILR
Sbjct: 221 ELHPM--KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
Query: 492 KK 493
KK
Sbjct: 279 KK 280
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 33/234 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 110
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV------ 159
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
+ P + Y+ PE++ EG EK D++S G+LC+E L GK
Sbjct: 160 -HAPSSRRXXLCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 207
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 208 PFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 31/244 (12%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRR 305
E + L +E++ + L HPNIV+Y D ++VME DL+ + T G++
Sbjct: 47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKE 104
Query: 306 RNSFSLPVVVDIMLQIARGMEFLH-----AQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
R V+ +M Q+ ++ H + H +L P+N++L + +VK+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-----NVKLGD 159
Query: 361 FGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
FGL+ + + PY + +PE + + +EK+D++S G
Sbjct: 160 FGLARILNHDE------DFAKEFVGTPY-YMSPEQM---------NRMSYNEKSDIWSLG 203
Query: 421 MLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPS 480
L +EL PF ++ IR G+ P L + + + RPS
Sbjct: 204 CLLYELCALMPPFT--AFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPS 261
Query: 481 FSSI 484
I
Sbjct: 262 VEEI 265
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 69 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 120
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 175
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 176 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + +KCW + RP F + I+ + K
Sbjct: 222 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL--IIEFSK 277
Query: 493 KFMANNP 499
MA +P
Sbjct: 278 --MARDP 282
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 59/284 (20%)
Query: 237 GDSFVLRHFYGELESLNAEISTMLSLSHPNIVQY---LCGF-CDEEKKE----------- 281
G ++V+R E E+ + L H NIV Y GF D E +
Sbjct: 37 GKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPE 96
Query: 282 ------------FFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLH 329
F+ ME K + + RR + +++ QI +G++++H
Sbjct: 97 NSKNSSRSKTKCLFIQMEFCDKGT---LEQWIEKRRGEKLDKVLALELFEQITKGVDYIH 153
Query: 330 AQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYI 389
++K+ H +L PSNI+L VK+ FGL T+ + T +
Sbjct: 154 SKKLIHRDLKPSNIFLVDTK-----QVKIGDFGLVTSLKNDGKRT--------RSKGTLR 200
Query: 390 WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+ +PE ++ Q+ ++ D+Y+ G++ ELL D + K ++R
Sbjct: 201 YMSPEQISSQD---------YGKEVDLYALGLILAELL----HVCDTAFETSKFFTDLRD 247
Query: 450 GERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKK 493
G + K L +K P RP+ S I R L KK
Sbjct: 248 G---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 288
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 37/253 (14%)
Query: 250 ESLNAEISTMLSLSHPNIV------------QYLCGFCDEEKKEFFLVMELMSKDLSCYM 297
E E L HPN+V + +C FLVM D+
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG--- 130
Query: 298 RETFGSRR-RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV 356
T R +++ P V ++ QIA GME+L + + H +L N+ + + +V
Sbjct: 131 -STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-----LNV 184
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K+S GL YA+ + P W APE + K S +D+
Sbjct: 185 KISDLGLFR-EVYAADYYKLLG----NSLLPIRWMAPEAIM---------YGKFSIDSDI 230
Query: 417 YSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPS 476
+S+G++ +E+ + + G+ D + + IR + P P ++ L +CW+ PS
Sbjct: 231 WSYGVVLWEVFSYGLQPYCGYSNQD-VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPS 289
Query: 477 QRPSFSSICRILR 489
+RP F I LR
Sbjct: 290 RRPRFKDIHSRLR 302
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDSTR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++K+ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 157 ------HAPSSRRAALCGTLDYL--PPEMI---EG------RMHDEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--DTYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS-FS 310
L E+ L HPNI++ F D + +L++E + E + ++ S F
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRG------EVYKELQKLSKFD 111
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ ++A + + H++++ H ++ P N+ L + +K++ FG S +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSVHAPSS 166
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
R T + + PE++ EG EK D++S G+LC+E L GK
Sbjct: 167 RRTTLCGTLD---------YLPPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGK 208
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 209 PPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
L E+ L HPNI++ F D + +L++E L RE ++ + F
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKLSKFDE 110
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV------ 159
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
+ P + Y+ PE++ EG EK D++S G+LC+E L GK
Sbjct: 160 -HAPSSRRAALCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGKP 207
Query: 432 PFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 208 PFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 157 ------HAPSSRRXXLCGTLDYL--PPEMI---EG------RMHDEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 30/192 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L HPNIV + E + LV E M KDL + E + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSE--RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI--- 123
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ RG+ H +I H +L P N+ + + +K++ FGL+ A R+
Sbjct: 124 --YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA-----LKLADFGLARAFGIPVRSY 176
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY AP+VL + K S D++S G + E++TGK P
Sbjct: 177 --------THEVVTLWYRAPDVL--------MGSKKYSTSVDIWSIGCIFAEMITGK-PL 219
Query: 434 EDGHLQGDKMTK 445
G D++ K
Sbjct: 220 FPGVTDDDQLPK 231
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 102
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + Y+ PE++ EG EK D++S G+LC+E
Sbjct: 157 ------HAPSSRRAALCGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEF 199
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L GK PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 200 LVGKPPFEANTYQ--ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRN 307
L+ E+ LSH NIV + DEE ++LVME + LS Y+ E+ G
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYI-ESHGP---- 107
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
S+ ++ QI G++ H +I H ++ P NI + + +K+ FG++ A
Sbjct: 108 -LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT-----LKIFDFGIAKAL 161
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ S Q +++PE + G +T +C+ D+YS G++ +E+L
Sbjct: 162 SETSLT------QTNHVLGTVQYFSPE-----QAKGE-ATDECT---DIYSIGIVLYEML 206
Query: 428 TGKVPF 433
G+ PF
Sbjct: 207 VGEPPF 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPV 313
EI M +PNIV YL + + E ++VME L L+ + ET +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQ------- 117
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ + + + +EFLH+ ++ H ++ NI L M+G VK++ FG + ++
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDG--SVKLTDFG------FCAQI 166
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP S ++ PY W APEV+ + K D++S G++ E++ G+ P+
Sbjct: 167 TPEQSKRSTMVGTPY-WMAPEVVTRK---------AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 30/192 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L HPNIV + E + LV E M KDL + E + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSE--RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI--- 123
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ RG+ H +I H +L P N+ + + +K++ FGL+ A R+
Sbjct: 124 --YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA-----LKLADFGLARAFGIPVRSY 176
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY AP+VL + K S D++S G + E++TGK P
Sbjct: 177 --------THEVVTLWYRAPDVL--------MGSKKYSTSVDIWSIGCIFAEMITGK-PL 219
Query: 434 EDGHLQGDKMTK 445
G D++ K
Sbjct: 220 FPGVTDDDQLPK 231
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPV 313
EI M +PNIV YL + + E ++VME L L+ + ET +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQ------- 117
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ + + + +EFLH+ ++ H ++ NI L M+G VK++ FG + ++
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDG--SVKLTDFG------FCAQI 166
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP S ++ PY W APEV+ + K D++S G++ E++ G+ P+
Sbjct: 167 TPEQSKRSXMVGTPY-WMAPEVVTRK---------AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPV 313
EI M +PNIV YL + + E ++VME L L+ + ET +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQ------- 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ + + + +EFLH+ ++ H ++ NI L M+G VK++ FG + ++
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDG--SVKLTDFG------FCAQI 167
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP S ++ PY W APEV+ + K D++S G++ E++ G+ P+
Sbjct: 168 TPEQSKRSXMVGTPY-WMAPEVVTRK---------AYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 254 AEISTMLSLSHPNIVQYLCGFC-----DEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS 308
A + + + HPN+V+ L C D E K LV E + +DL+ Y+ +
Sbjct: 63 AVLRHLETFEHPNVVR-LFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKV----PEPG 116
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ D+M Q+ RG++FLH+ ++ H +L P NI + + +K++ FGL AR
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGL--ARI 169
Query: 369 YASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y+ + T+ +WY APEVL + S + D++S G + E+
Sbjct: 170 YSFQ-------MALTSVVVTLWYRAPEVLLQ---------SSYATPVDLWSVGCIFAEMF 213
Query: 428 TGKVPFEDGHLQGDKMTK 445
K P G D++ K
Sbjct: 214 RRK-PLFRGSSDVDQLGK 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 254 AEISTMLSLSHPNIVQYLCGFC-----DEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS 308
A + + + HPN+V+ L C D E K LV E + +DL+ Y+ +
Sbjct: 63 AVLRHLETFEHPNVVR-LFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKV----PEPG 116
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ D+M Q+ RG++FLH+ ++ H +L P NI + + +K++ FGL AR
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGL--ARI 169
Query: 369 YASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y+ + T+ +WY APEVL + S + D++S G + E+
Sbjct: 170 YSFQ-------MALTSVVVTLWYRAPEVLLQ---------SSYATPVDLWSVGCIFAEMF 213
Query: 428 TGKVPFEDGHLQGDKMTK 445
K P G D++ K
Sbjct: 214 RRK-PLFRGSSDVDQLGK 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGXLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 43/244 (17%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +L+ME S G +
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE 112
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R+ F QI +++ H ++I H +L N+ L A ++K++ FG S
Sbjct: 113 ARSKFR---------QIVSAVQYCHQKRIVHRDLKAENLLLDAD-----MNIKIADFGFS 158
Query: 365 TARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T + +T SP PY APE+ ++ G + DV+S G++
Sbjct: 159 NEFTVGGKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLGVIL 201
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+ L++G +PF DG + + +R R P + S + NL K+ NP +R +
Sbjct: 202 YTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKRFLVLNPIKRGTLE 257
Query: 483 SICR 486
I +
Sbjct: 258 QIMK 261
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 254 AEISTMLSLSHPNIVQYLCGFC-----DEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS 308
A + + + HPN+V+ L C D E K LV E + +DL+ Y+ +
Sbjct: 63 AVLRHLETFEHPNVVR-LFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKV----PEPG 116
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ D+M Q+ RG++FLH+ ++ H +L P NI + + +K++ FGL AR
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGL--ARI 169
Query: 369 YASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y+ + T+ +WY APEVL + S + D++S G + E+
Sbjct: 170 YSFQ-------MALTSVVVTLWYRAPEVLLQ---------SSYATPVDLWSVGCIFAEMF 213
Query: 428 TGKVPFEDGHLQGDKMTK 445
K P G D++ K
Sbjct: 214 RRK-PLFRGSSDVDQLGK 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 61 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 112
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 113 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 167
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 168 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 213
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 214 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 269
Query: 493 KFMANNP 499
MA +P
Sbjct: 270 --MARDP 274
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 93/241 (38%), Gaps = 33/241 (13%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
N E + SHPN++ L G C ++ S Y G+ S
Sbjct: 54 FNEECPRLRIFSHPNVLPVL-GACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQ 112
Query: 312 PVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
V L ARG FLH + I LN ++ + V S R Y
Sbjct: 113 --AVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY 170
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQ-EGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A PA W APE L ++ E T S AD +SF +L +EL+T
Sbjct: 171 A-----PA------------WVAPEALQKKPEDTNRRS-------ADXWSFAVLLWELVT 206
Query: 429 GKVPFEDGHLQGDKMTKNIR-AGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRI 487
+VPF D L ++ + G RP P G ++ L K C + +P++RP F I I
Sbjct: 207 REVPFAD--LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPI 264
Query: 488 L 488
L
Sbjct: 265 L 265
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 242 LRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETF 301
+RH +L ++ +E+ + SL+H +V+Y + E++ F + K + +++ +
Sbjct: 39 IRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL--ERRNFVKPXTAVKKKSTLFIQXEY 96
Query: 302 GSRRR-----NSFSLPVVVD----IMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEG 352
R +S +L D + QI + ++H+Q I H L P NI++
Sbjct: 97 CENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESR--- 153
Query: 353 YFHVKVSGFGLST-------ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGST 405
+VK+ FGL+ S+N P +S +A + A EVL +GTG
Sbjct: 154 --NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL---DGTGH- 207
Query: 406 STSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGD--KMTKNIRAGERPLFPSGSPKYL 463
+EK D YS G++ FE + PF G + + K +++ P F K
Sbjct: 208 ----YNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVE 260
Query: 464 VNLTKKCWHTNPSQRPSFSSIC 485
+ + +P++RP ++
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLL 282
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 69 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 120
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 175
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 176 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 222 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 277
Query: 493 KFMANNP 499
MA +P
Sbjct: 278 --MARDP 282
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 69 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 120
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 175
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 176 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 222 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 277
Query: 493 KFMANNP 499
MA +P
Sbjct: 278 --MARDP 282
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ + +K+ FGL+ +
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G++ E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGVIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 92 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 143
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 144 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 198
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 199 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 244
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 245 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 300
Query: 493 KFMANNP 499
MA +P
Sbjct: 301 --MARDP 305
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 70 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 121
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 177 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 222
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 223 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 278
Query: 493 KFMANNP 499
MA +P
Sbjct: 279 --MARDP 283
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 70 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 121
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 176
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 177 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 222
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 223 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 278
Query: 493 KFMANNP 499
MA +P
Sbjct: 279 --MARDP 283
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS-FS 310
L E+ L HPNI++ F D + +L++E + E + ++ S F
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRG------EVYKELQKLSKFD 111
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSV----- 161
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+ P + Y+ PE++ EG EK D++S G+LC+E L GK
Sbjct: 162 --HAPSSRRXXLXGTLDYL--PPEMI---EGRMH------DEKVDLWSLGVLCYEFLVGK 208
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
PFE Q + K I E FP + +L + NPSQRP +
Sbjct: 209 PPFEANTYQ--ETYKRISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
L+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 91 LNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 145
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 201
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 202 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 249 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 305
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 306 ---DPDVINTAL 314
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 74 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 125
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 180
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 181 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 226
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 227 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 282
Query: 493 KFMANNP 499
MA +P
Sbjct: 283 --MARDP 287
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ + +K+ FGL+ +
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G++ E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGVIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 73 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 124
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 125 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 179
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 180 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 225
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 226 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 281
Query: 493 KFMANNP 499
MA +P
Sbjct: 282 --MARDP 286
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+M+LM L Y+RE +++
Sbjct: 71 EAYVMASVDNPHVCR-LLGICLTSTVQ--LIMQLMPFGCLLDYVRE-----HKDNIGSQY 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 178 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 223
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 224 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 279
Query: 493 KFMANNP 499
MA +P
Sbjct: 280 --MARDP 284
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 74 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 125
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 180
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 181 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 226
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 227 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 282
Query: 493 KFMANNP 499
MA +P
Sbjct: 283 --MARDP 287
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 46/271 (16%)
Query: 237 GDSFVLRHFYGELESLNAEISTMLSLSHPNIVQY---LCGF-----------CDEEKKEF 282
G ++V++ E E+ + L H NIV Y GF + K
Sbjct: 36 GKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL 95
Query: 283 FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSN 342
F+ ME K + + RR + +++ QI +G++++H++K+ + +L PSN
Sbjct: 96 FIQMEFCDKGT---LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 343 IYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGT 402
I+L VK+ FGL T+ + + + +PE ++ Q+
Sbjct: 153 IFLVDTK-----QVKIGDFGLVTS--------LKNDGKRXRSKGTLRYMSPEQISSQD-- 197
Query: 403 GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKY 462
++ D+Y+ G++ ELL D + K ++R G + K
Sbjct: 198 -------YGKEVDLYALGLILAELL----HVCDTAFETSKFFTDLRDG---IISDIFDKK 243
Query: 463 LVNLTKKCWHTNPSQRPSFSSICRILRYIKK 493
L +K P RP+ S I R L KK
Sbjct: 244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPV 313
EI M +PNIV YL + + E ++VME L L+ + ET +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVTETCMDEGQ------- 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ + + + +EFLH+ ++ H + NI L M+G VK++ FG + ++
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRNIKSDNILL---GMDG--SVKLTDFG------FCAQI 167
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP S ++ PY W APEV+ + K D++S G++ E++ G+ P+
Sbjct: 168 TPEQSKRSTMVGTPY-WMAPEVVTRK---------AYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 36/191 (18%)
Query: 261 SLSHPNIVQYL--CGFCDEEKK-EFFLVMELMSKDLSCYMRETFGSRRRNSFSLP--VVV 315
+ HPN+V+ + C +++ + LV E + +DL Y+ + LP +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA------PPPGLPAETIK 123
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
D+M Q RG++FLHA I H +L P NI + + VK++ FGL+ +Y TP
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLARIYSYQMALTP 178
Query: 376 PASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+WY APEVL + S + D++S G + E+ K P
Sbjct: 179 VVV---------TLWYRAPEVLLQ---------STYATPVDMWSVGCIFAEMFRRK-PLF 219
Query: 435 DGHLQGDKMTK 445
G+ + D++ K
Sbjct: 220 CGNSEADQLGK 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F++MELM+ DL ++RET R R S + + +L
Sbjct: 90 FNHQNIVR--CIGVSLQSLPRFILMELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 144
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 200
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 201 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 247
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 248 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 304
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 305 ---DPDVINTAL 313
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
L+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 105 LNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 159
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 215
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 216 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 263 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 319
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 320 ---DPDVINTAL 328
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 101 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 152
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 153 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 207
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 208 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 253
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 254 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 309
Query: 493 KFMANNP 499
MA +P
Sbjct: 310 --MARDP 314
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 47/245 (19%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-----MSKDL--SCYMRE 299
G L EI L HPNI++ F D ++ +L++E + K+L SC
Sbjct: 65 GVEHQLRREIEIQAHLHHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSC---- 118
Query: 300 TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVS 359
TF +R IM ++A + + H +K+ H ++ P N+ L + K++
Sbjct: 119 TFDEQR--------TATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGEL-----KIA 165
Query: 360 GFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
FG S + P S + +T + PE++ EG +EK D++
Sbjct: 166 DFGWSV-------HAP--SLRRKTMCGTLDYLPPEMI---EGRMH------NEKVDLWCI 207
Query: 420 GMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRP 479
G+LC+ELL G PFE + + ++ + FP+ P +L K NPS+R
Sbjct: 208 GVLCYELLVGNPPFESAS-HNETYRRIVKVDLK--FPASVPTGAQDLISKLLRHNPSERL 264
Query: 480 SFSSI 484
+ +
Sbjct: 265 PLAQV 269
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 250 ESLNAEISTML---SLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+S A ML SL H +IV+ L G C ++L+++ L + R
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVR-LLGLCPGSS------LQLVTQYLPLGSLLDHVRQHR 109
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ ++++ +QIA+GM +L + H L N+ LK+ S V+V+ FG++
Sbjct: 110 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-----QVQVADFGVADL 164
Query: 367 RTYASRNTPPASPQ--NQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
PP Q A P W A E S K + ++DV+S+G+ +
Sbjct: 165 -------LPPDDKQLLYSEAKTPIKWMALE---------SIHFGKYTHQSDVWSYGVTVW 208
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
EL+T G P+ L+ ++ + GER P + + KCW + + RP+F
Sbjct: 209 ELMTFGAEPYAG--LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKE 266
Query: 484 IC 485
+
Sbjct: 267 LA 268
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F++MELM+ DL ++RET R R S + + +L
Sbjct: 105 FNHQNIVR--CIGVSLQSLPRFILMELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 159
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 215
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 216 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 262
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 263 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 319
Query: 495 MANNPDIARS 504
+PD+ +
Sbjct: 320 ---DPDVINT 326
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 250 ESLNAEISTML---SLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
+S A ML SL H +IV+ L G C ++L+++ L + R
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVR-LLGLCPGSS------LQLVTQYLPLGSLLDHVRQHR 127
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ ++++ +QIA+GM +L + H L N+ LK+ S V+V+ FG++
Sbjct: 128 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-----QVQVADFGVADL 182
Query: 367 RTYASRNTPPASPQ--NQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
PP Q A P W A E S K + ++DV+S+G+ +
Sbjct: 183 -------LPPDDKQLLYSEAKTPIKWMALE---------SIHFGKYTHQSDVWSYGVTVW 226
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
EL+T G P+ L+ ++ + GER P + + KCW + + RP+F
Sbjct: 227 ELMTFGAEPYAG--LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKE 284
Query: 484 IC 485
+
Sbjct: 285 LA 286
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 42/201 (20%)
Query: 254 AEISTMLSLSHPNIVQYL--CGFCDEEKK-EFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
A + + + HPN+V+ + C +++ + LV E + +DL Y+ +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA------PPPG 108
Query: 311 LP--VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP + D+M Q RG++FLHA I H +L P NI + + VK++ FGL+ +
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLARIYS 163
Query: 369 YASRNTPPASPQNQTAPNPYI---WY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y Q A +P + WY APEVL + S + D++S G +
Sbjct: 164 Y------------QMALDPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFA 202
Query: 425 ELLTGKVPFEDGHLQGDKMTK 445
E+ K P G+ + D++ K
Sbjct: 203 EMFRRK-PLFCGNSEADQLGK 222
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 241 VLRHFYGELESLNAEISTML--SLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM 297
L Y E + L+ + ++ +H NIV+ C + F+++ELM+ DL ++
Sbjct: 82 TLPEVYSEQDELDFLMEALIISKFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFL 139
Query: 298 RETFGSRRRNSFSLPVVVDIMLQIAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGY 353
RET R R S + + +L +AR G ++L H ++ N L + G
Sbjct: 140 RET---RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL---TCPGP 193
Query: 354 FHV-KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSE 412
V K+ FG++ AS + A P W PE E T
Sbjct: 194 GRVAKIGDFGMARDIYRASYYR-----KGGCAMLPVKWMPPEAFMEGIFT---------S 239
Query: 413 KADVYSFGMLCFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCW 471
K D +SFG+L +E+ + G +P+ Q ++ + + +G R P P + + +CW
Sbjct: 240 KTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCW 297
Query: 472 HTNPSQRPSFSSICRILRYIKKFMANNPDIARS 504
P RP+F+ I + Y + +PD+ +
Sbjct: 298 QHQPEDRPNFAIILERIEYCTQ----DPDVINT 326
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 61/256 (23%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + L H N+V L C ++KK ++LV E + + + E F N VV
Sbjct: 74 EIKLLKQLRHENLVN-LLEVC-KKKKRWYLVFEFVDHTILDDL-ELFP----NGLDYQVV 126
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ QI G+ F H+ I H ++ P NI + + VK+ FG ART A+
Sbjct: 127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV-----VKLCDFGF--ARTLAA--- 176
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
P ++ A WY APE+L K + DV++ G L E+ G+ P
Sbjct: 177 PGEVYDDEVATR---WYRAPELL--------VGDVKYGKAVDVWAIGCLVTEMFMGE-PL 224
Query: 434 EDGHLQGDKM------------------TKN-IRAGER--------PL---FPSGSPKYL 463
G D++ KN + AG R PL +P S + +
Sbjct: 225 FPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS-EVV 283
Query: 464 VNLTKKCWHTNPSQRP 479
++L KKC H +P +RP
Sbjct: 284 IDLAKKCLHIDPDKRP 299
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYM-RETFGSRRRNSFSLP 312
E ++ ++HP IV+ F E K +L+++ + DL + +E + F L
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 134
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++A ++ LH+ I + +L P NI L EG H+K++ FGLS +
Sbjct: 135 -------ELALALDHLHSLGIIYRDLKPENILLDE---EG--HIKLTDFGLS-------K 175
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ + + + APEV+ + T S AD +SFG+L FE+LTG +P
Sbjct: 176 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS---------ADWWSFGVLMFEMLTGTLP 226
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQR 478
F+ G + + MT ++A G P++L +L + + NP+ R
Sbjct: 227 FQ-GKDRKETMTMILKA------KLGMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 64 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 115
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA GM +L +++ H +L N+ +K HVK++ FGL+ +
Sbjct: 116 LLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGLAKLLGAEEKE 170
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 171 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 216
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 217 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 272
Query: 493 KFMANNP 499
MA +P
Sbjct: 273 --MARDP 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 255 EISTMLSLS-HPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSRRRNSFSL 311
EI +L HPNI+ + ++ K ++V EL L +R+ F S R S
Sbjct: 65 EIEILLRYGQHPNIITLKDVY--DDGKYVYVVTELXKGGELLDKILRQKFFSEREAS--- 119
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
++ I + +E+LHAQ + H +L PSNI S +++ FG A+ +
Sbjct: 120 ----AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE-SIRICDFGF--AKQLRA 172
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
N +P + APEVL E++G + D++S G+L + LTG
Sbjct: 173 ENGLLXTPCYTAN-----FVAPEVL-ERQGYDAA--------CDIWSLGVLLYTXLTGYT 218
Query: 432 PFEDGHLQGDKMTKNI--RAGERPLFPSGSPKYLV-----NLTKKCWHTNPSQRPSFSSI 484
PF +G D + I R G SG V +L K H +P QR + + +
Sbjct: 219 PFANG---PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALV 275
Query: 485 CR 486
R
Sbjct: 276 LR 277
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 38/259 (14%)
Query: 248 ELESLNAEISTMLSL-SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET------ 300
E E+L +E+ M L SH NIV L G C + + DL Y+R
Sbjct: 91 EREALMSELKMMTQLGSHENIVN-LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 301 ----FGSRRR-------NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARS 349
+ +++R N + ++ Q+A+GMEFL + H +L N+ +
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK 209
Query: 350 MEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSK 409
+ VK+ FGL AR S + A P W APE L E T
Sbjct: 210 V-----VKICDFGL--ARDIMSDSNYVV---RGNARLPVKWMAPESLFEGIYT------- 252
Query: 410 CSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKK 469
K+DV+S+G+L +E+ + V G K I+ G + P + + + + +
Sbjct: 253 --IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS 310
Query: 470 CWHTNPSQRPSFSSICRIL 488
CW + +RPSF ++ L
Sbjct: 311 CWAFDSRKRPSFPNLTSFL 329
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYM-RETFGSRRRNSFSLP 312
E ++ ++HP IV+ F E K +L+++ + DL + +E + F L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++A ++ LH+ I + +L P NI L EG H+K++ FGLS +
Sbjct: 134 -------ELALALDHLHSLGIIYRDLKPENILLDE---EG--HIKLTDFGLS-------K 174
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ + + + APEV+ + T S AD +SFG+L FE+LTG +P
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS---------ADWWSFGVLMFEMLTGTLP 225
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQR 478
F+ G + + MT ++A G P++L +L + + NP+ R
Sbjct: 226 FQ-GKDRKETMTMILKA------KLGMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 69 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 120
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 175
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 176 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + +KCW + RP F + I+ + K
Sbjct: 222 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL--IIEFSK 277
Query: 493 KFMANNP 499
MA +P
Sbjct: 278 --MARDP 282
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 51/244 (20%)
Query: 279 KKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGE 337
K+ ++ME M +L ++E R +F+ +IM I ++FLH+ I H +
Sbjct: 79 KRCLLIIMECMEGGELFSRIQE----RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 134
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLA 397
+ P N+ ++ + +K++ FG + T + TP +P + APEVL
Sbjct: 135 VKPENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP---------YYVAPEVLG 183
Query: 398 EQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF--EDGHLQGDKMTKNIRAGERPLF 455
+ K + D++S G++ + LL G PF G M + IR G+ F
Sbjct: 184 PE---------KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG-F 233
Query: 456 P-------SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKFMANNPDIARSEF-- 506
P S K L+ L K T+P++R + I +FM N+P I +S
Sbjct: 234 PNPEWSEVSEDAKQLIRLLLK---TDPTERLT----------ITQFM-NHPWINQSMVVP 279
Query: 507 QSPL 510
Q+PL
Sbjct: 280 QTPL 283
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-----MSKDLSCYMRETF 301
G L EI L HPNI++ F D +K +L++E + K+L + R F
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGR--F 111
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
+R +F M ++A + + H +K+ H ++ P N+ + + +K++ F
Sbjct: 112 DEQRSATF--------MEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADF 158
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G S + P + Y+ PE++ G T EK D++ G+
Sbjct: 159 GWSV-------HAPSLRRRXMCGTLDYL--PPEMIE-----GKTH----DEKVDLWCAGV 200
Query: 422 LCFELLTGKVPFED-GHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
LC+E L G PF+ H + + N+ P GS +L K +P QR
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK----DLISKLLRYHPPQR 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E + EIS M L H N++Q F E K + LVME + E F S+
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAF--ESKNDIVLVMEYVDGG------ELFDRIIDESY 182
Query: 310 SLPVVVDI--MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+L + I M QI G+ +H I H +L P NI R + +K+ FGL AR
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK---QIKIIDFGL--AR 237
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
Y R N P + APEV+ + S D++S G++ + LL
Sbjct: 238 RYKPREKLKV---NFGTPE---FLAPEVV---------NYDFVSFPTDMWSVGVIAYMLL 282
Query: 428 TGKVPF 433
+G PF
Sbjct: 283 SGLSPF 288
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 91 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 145
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMAQDIYRASYYR- 201
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 202 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 249 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 305
Query: 495 MANNPDIARS 504
+PD+ +
Sbjct: 306 ---DPDVINT 312
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYM-RETFGSRRRNSFSLP 312
E ++ ++HP IV+ F E K +L+++ + DL + +E + F L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++A ++ LH+ I + +L P NI L EG H+K++ FGLS +
Sbjct: 134 -------ELALALDHLHSLGIIYRDLKPENILLDE---EG--HIKLTDFGLS-------K 174
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ + + + APEV+ + T S AD +SFG+L FE+LTG +P
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS---------ADWWSFGVLMFEMLTGTLP 225
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQR 478
F+ G + + MT ++A G P++L +L + + NP+ R
Sbjct: 226 FQ-GKDRKETMTMILKA------KLGMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYM-RETFGSRRRNSFSLP 312
E + ++HP +V+ F E K +L+++ + DL + +E + F L
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 137
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++A G++ LH+ I + +L P NI L EG H+K++ FGLS +
Sbjct: 138 -------ELALGLDHLHSLGIIYRDLKPENILLDE---EG--HIKLTDFGLS-------K 178
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ + + APEV+ Q S AD +S+G+L FE+LTG +P
Sbjct: 179 EAIDHEKKAYSFCGTVEYMAPEVVNRQ---------GHSHSADWWSYGVLMFEMLTGSLP 229
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQR 478
F+ G + + MT ++A G P++L +L + + NP+ R
Sbjct: 230 FQ-GKDRKETMTLILKA------KLGMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 51/244 (20%)
Query: 279 KKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGE 337
K+ ++ME M +L ++E R +F+ +IM I ++FLH+ I H +
Sbjct: 98 KRCLLIIMECMEGGELFSRIQE----RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 153
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLA 397
+ P N+ ++ + +K++ FG + T + TP +P + APEVL
Sbjct: 154 VKPENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP---------YYVAPEVLG 202
Query: 398 EQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF--EDGHLQGDKMTKNIRAGERPLF 455
+ K + D++S G++ + LL G PF G M + IR G+ F
Sbjct: 203 PE---------KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG-F 252
Query: 456 P-------SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKFMANNPDIARSEF-- 506
P S K L+ L K T+P++R + I +FM N+P I +S
Sbjct: 253 PNPEWSEVSEDAKQLIRLLLK---TDPTERLT----------ITQFM-NHPWINQSMVVP 298
Query: 507 QSPL 510
Q+PL
Sbjct: 299 QTPL 302
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSC---YMRETFGS 303
G +E + EI+ + L HPN+V+ + D + ++V EL+++ ++
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
+ R F + +G+E+LH QKI H ++ PSN+ + H+K++ FG+
Sbjct: 138 QARFYFQ---------DLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-----HIKIADFGV 183
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S + + + T P + APE L+E T + DV++ G+
Sbjct: 184 SNEFKGSD------ALLSNTVGTP-AFMAPESLSE------TRKIFSGKALDVWAMGVTL 230
Query: 424 FELLTGKVPFED 435
+ + G+ PF D
Sbjct: 231 YCFVFGQCPFMD 242
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 51/248 (20%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +L+ME S G +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE 115
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R+ F QI +++ H ++I H +L N+ L A ++K++ FG S
Sbjct: 116 ARSKFR---------QIVSAVQYCHQKRIVHRDLKAENLLLDAD-----MNIKIADFGFS 161
Query: 365 TARTYASR-----NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSF 419
T + PP + APE+ ++ G + DV+S
Sbjct: 162 NEFTVGGKLDAFCGAPP-------------YAAPELFQGKKYDGP--------EVDVWSL 200
Query: 420 GMLCFELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQR 478
G++ + L++G +PF DG + + +R R P + S + NL K+ NP +R
Sbjct: 201 GVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCE---NLLKRFLVLNPIKR 256
Query: 479 PSFSSICR 486
+ I +
Sbjct: 257 GTLEQIMK 264
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-----MSKDLSCYMRETF 301
G L EI L HPNI++ F D +K +L++E + K+L + R F
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGR--F 111
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
+R +F M ++A + + H +K+ H ++ P N+ + + +K++ F
Sbjct: 112 DEQRSATF--------MEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADF 158
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G S + P + Y+ PE++ G T EK D++ G+
Sbjct: 159 GWSV-------HAPSLRRRXMCGTLDYL--PPEMI-----EGKTH----DEKVDLWCAGV 200
Query: 422 LCFELLTGKVPFED-GHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
LC+E L G PF+ H + + N+ P GS +L K +P QR
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK----DLISKLLRYHPPQR 254
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 90 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 144
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 200
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 201 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 247
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 248 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 304
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 305 ---DPDVINTAL 313
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 91 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 145
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 201
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 202 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 248
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 249 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 305
Query: 495 MANNPDIARS 504
+PD+ +
Sbjct: 306 ---DPDVINT 312
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 264 HPNIVQYLCGFCDEEKKEF-FLVMELMSKDLSCYMRET-FGSRRRNSFSLPVVVDIMLQI 321
HPN+++Y FC E+ ++F ++ +EL + L Y+ + F +L + Q
Sbjct: 77 HPNVIRY---FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL------LQQT 127
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG----LSTARTYASRNTPPA 377
G+ LH+ I H +L P NI + + G +S FG L+ R SR +
Sbjct: 128 TSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS--- 184
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPF 433
P W APE+L+E T T D++S G + + +++ G PF
Sbjct: 185 -----GVPGTEGWIAPEMLSEDCKENPTYT------VDIFSAGCVFYYVISEGSHPF 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 52/197 (26%)
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS--TARTYAS 371
+ ++ +I +G+++LH++K H ++ +N+ L + VK++ FG++ T
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-----DVKLADFGVAGQLTDTQIK 176
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
RNT +P W APEV+ + S KAD++S G+ EL G+
Sbjct: 177 RNTFVGTP---------FWMAPEVIQQ---------SAYDSKADIWSLGITAIELAKGEP 218
Query: 432 PFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLV-NLTKK-------CWHTNPSQRPSF 481
P D H R LF P +P LV + TK C + +PS RP+
Sbjct: 219 PNSDMHPM------------RVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTA 266
Query: 482 SSICRILRYIKKFMANN 498
+ + KF+ N
Sbjct: 267 KELLK-----HKFIVKN 278
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ + +K+ FGL+ +
Sbjct: 131 ------LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 97 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 151
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 207
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 208 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 254
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 255 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 311
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 312 ---DPDVINTAL 320
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-----MSKDLSCYMRETF 301
G L EI L HPNI++ F D +K +L++E + K+L + R F
Sbjct: 57 GVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGR--F 112
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
+R +F M ++A + + H +K+ H ++ P N+ + + +K++ F
Sbjct: 113 DEQRSATF--------MEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADF 159
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G S + P + Y+ PE++ G T EK D++ G+
Sbjct: 160 GWSV-------HAPSLRRRXMCGTLDYL--PPEMIE-----GKTH----DEKVDLWCAGV 201
Query: 422 LCFELLTGKVPFED-GHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
LC+E L G PF+ H + + N+ P GS +L K +P QR
Sbjct: 202 LCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK----DLISKLLRYHPPQR 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 82 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 136
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 192
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 193 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 239
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 240 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 296
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 297 ---DPDVINTAL 305
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 42/201 (20%)
Query: 254 AEISTMLSLSHPNIVQYL--CGFCDEEKK-EFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
A + + + HPN+V+ + C +++ + LV E + +DL Y+ +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA------PPPG 108
Query: 311 LP--VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP + D+M Q RG++FLHA I H +L P NI + + VK++ FGL+ +
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLARIYS 163
Query: 369 YASRNTPPASPQNQTAPNPYI---WY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y Q A P + WY APEVL + S + D++S G +
Sbjct: 164 Y------------QMALAPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFA 202
Query: 425 ELLTGKVPFEDGHLQGDKMTK 445
E+ K P G+ + D++ K
Sbjct: 203 EMFRRK-PLFCGNSEADQLGK 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 107 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 161
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 217
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 218 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 264
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 265 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 321
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 322 ---DPDVINTAL 330
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 117 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 171
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ AS
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRASYYR- 227
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 228 ----KGGCAMLPVKWMPPEAFMEGIFTS---------KTDTWSFGVLLWEIFSLGYMPYP 274
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 275 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 331
Query: 495 MANNPDIARS 504
+PD+ +
Sbjct: 332 ---DPDVINT 338
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI+ + P I +Y + K +++ME + + + + +
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTK--LWIIMEYLGGGSALDLL------KPGPLEETYI 118
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
I+ +I +G+++LH+++ H ++ +N+ L + VK++ FG+ A + T
Sbjct: 119 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-----DVKLADFGV------AGQLT 167
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+N P+ W APEV+ + S KAD++S G+ EL G+ P
Sbjct: 168 DTQIKRNXFVGTPF-WMAPEVIKQ---------SAYDFKADIWSLGITAIELAKGEPPNS 217
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICR---ILRYI 491
D H ++ I P K + C + +P RP+ + + I RY
Sbjct: 218 DLHPM--RVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 275
Query: 492 KK 493
KK
Sbjct: 276 KK 277
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 240 FVLRHFYGELESLNA--EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM 297
+ L+ G S++A EI+ + L HPN++ F ++ +L+ + DL +
Sbjct: 51 YALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHII 110
Query: 298 RETFGSR-RRNSFSLP--VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYF 354
+ S+ + LP +V ++ QI G+ +LHA + H +L P+NI + E
Sbjct: 111 KFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER-G 169
Query: 355 HVKVSGFGLSTARTYASRNTPPASPQNQTAPNPY-IWY-APEVLAEQEGTGSTSTSKCSE 412
VK++ G AR + S P P P WY APE+L G+ +K
Sbjct: 170 RVKIADMGF--ARLFNS----PLKPLADLDPVVVTFWYRAPELL-----LGARHYTKA-- 216
Query: 413 KADVYSFGMLCFELLTGKVPFE 434
D+++ G + ELLT + F
Sbjct: 217 -IDIWAIGCIFAELLTSEPIFH 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
V + I +QIA +EFLH++ + H +L PSNI+ + VKV FGL TA
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-----VKVGDFGLVTAMD---- 215
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTG------STSTSKCSEKADVYSFGMLCFEL 426
+ QT P YA Q GT + S K D++S G++ FEL
Sbjct: 216 ----QDEEEQTVLTPMPAYATH--XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP-LFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
L ++ ++ ++R + P LF P+ + + + +P++RP + I
Sbjct: 270 LYSF----STQMERVRIITDVRNLKFPLLFTQKYPQEHM-MVQDMLSPSPTERPEATDII 324
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 264 HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN-SFSLPVVVDIMLQIA 322
HP++V L GFCDE + E L+ + M R +GS S S ++I + A
Sbjct: 94 HPHLVS-LIGFCDE-RNEMILIYKYMEN--GNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 323 RGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQ 382
RG+ +LH + I H ++ NI L F K++ FG+S T + +
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDEN-----FVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+ PE + + +EK+DVYSFG++ FE+L +
Sbjct: 205 LG-----YIDPEYFIK---------GRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 68/294 (23%)
Query: 255 EISTMLSLS-HPNIVQYLCGFC------DEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
E+ M LS HPNIVQ+ D + EF L+ EL L ++++ R
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM---ESRG 131
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
S V+ I Q R ++ +H QK I H +L N+ L + +K+ FG +T
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT-----IKLCDFGSAT 186
Query: 366 ARTY-----------------ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTS 408
++ +RNT P ++ PE++ S
Sbjct: 187 TISHYPDYSWSAQRRALVEEEITRNTTP------------MYRTPEII------DLYSNF 228
Query: 409 KCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLV--NL 466
EK D+++ G + + L + PFEDG I G+ + P + +Y V +L
Sbjct: 229 PIGEKQDIWALGCILYLLCFRQHPFEDG------AKLRIVNGKYSIPPHDT-QYTVFHSL 281
Query: 467 TKKCWHTNPSQRPSFSSICRILRYIKKFMANNPDIARSEFQSPLADYCDIEAGF 520
+ NP +R S + + L+ I NP +SP+ + + G+
Sbjct: 282 IRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP-------KSPITELLEQNGGY 328
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRR 306
ELE EI + S HPNIV+ L F E ++++E + + M E R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWILIEFCAGGAVDAVMLEL--ERPL 132
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ VV Q + +LH KI H +L NI +++G +K++ FG+S
Sbjct: 133 TESQIQVVCK---QTLDALNYLHDNKIIHRDLKAGNILF---TLDG--DIKLADFGVS-- 182
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++NT ++ PY W APEV+ + ++ KADV+S G+ E+
Sbjct: 183 ----AKNTRXIQRRDXFIGTPY-WMAPEVVMCE----TSKDRPYDYKADVWSLGITLIEM 233
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P + L ++ I E P PS + KKC N R + S +
Sbjct: 234 AEIEPPHHE--LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
Query: 485 CR 486
+
Sbjct: 292 LQ 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRR 306
ELE EI + S HPNIV+ L F E ++++E + + M E R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWILIEFCAGGAVDAVMLEL--ERPL 132
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ VV Q + +LH KI H +L NI +++G +K++ FG+S
Sbjct: 133 TESQIQVVCK---QTLDALNYLHDNKIIHRDLKAGNILF---TLDG--DIKLADFGVS-- 182
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++NT ++ PY W APEV+ + ++ KADV+S G+ E+
Sbjct: 183 ----AKNTRTIQRRDSFIGTPY-WMAPEVVMCE----TSKDRPYDYKADVWSLGITLIEM 233
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P + L ++ I E P PS + KKC N R + S +
Sbjct: 234 AEIEPPHHE--LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
Query: 485 CR 486
+
Sbjct: 292 LQ 293
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 264 HPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN-SFSLPVVVDIMLQIA 322
HP++V L GFCDE + E L+ + M R +GS S S ++I + A
Sbjct: 94 HPHLVS-LIGFCDE-RNEMILIYKYMEN--GNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 323 RGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQ 382
RG+ +LH + I H ++ NI L F K++ FG+S T + +
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDEN-----FVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+ PE + + +EK+DVYSFG++ FE+L +
Sbjct: 205 LG-----YIDPEYFIK---------GRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRR 306
ELE EI + S HPNIV+ L F E ++++E + + M E R
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWILIEFCAGGAVDAVMLEL--ERPL 132
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ VV Q + +LH KI H +L NI +++G +K++ FG+S
Sbjct: 133 TESQIQVVCK---QTLDALNYLHDNKIIHRDLKAGNILF---TLDG--DIKLADFGVS-- 182
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++NT ++ PY W APEV+ + ++ KADV+S G+ E+
Sbjct: 183 ----AKNTRXIQRRDSFIGTPY-WMAPEVVMCE----TSKDRPYDYKADVWSLGITLIEM 233
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P + L ++ I E P PS + KKC N R + S +
Sbjct: 234 AEIEPPHHE--LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
Query: 485 CR 486
+
Sbjct: 292 LQ 293
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L+ H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 73 EIKILLAFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L S +K+ FGL+
Sbjct: 129 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTS-----DLKICDFGLARVA 176
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 177 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 223
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 224 LSNRPIFPGKH 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 42/201 (20%)
Query: 254 AEISTMLSLSHPNIVQYL--CGFCDEEKK-EFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
A + + + HPN+V+ + C +++ + LV E + +DL Y+ +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA------PPPG 108
Query: 311 LP--VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
LP + D+M Q RG++FLHA I H +L P NI + + VK++ FGL+ +
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLARIYS 163
Query: 369 YASRNTPPASPQNQTAPNPYI---WY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
Y Q A P + WY APEVL + S + D++S G +
Sbjct: 164 Y------------QMALFPVVVTLWYRAPEVLLQ---------STYATPVDMWSVGCIFA 202
Query: 425 ELLTGKVPFEDGHLQGDKMTK 445
E+ K P G+ + D++ K
Sbjct: 203 EMFRRK-PLFCGNSEADQLGK 222
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 240 FVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE 299
FV+ + E++ EI TM L HP +V F E+ E ++ E MS E
Sbjct: 83 FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGG------E 134
Query: 300 TFG--SRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNI-YLKARSMEGYFHV 356
F + N S V+ M Q+ +G+ +H H +L P NI + RS E +
Sbjct: 135 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE----L 190
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K+ FGL+ + P S + T + APEV AE + G + D+
Sbjct: 191 KLIDFGLT------AHLDPKQSVKVTTGTAEFA--APEV-AEGKPVGYYT--------DM 233
Query: 417 YSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+S G+L + LL+G PF G D+ +N+++
Sbjct: 234 WSVGVLSYILLSGLSPF--GGENDDETLRNVKS 264
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 74 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 125
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 180
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 181 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 226
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 227 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 282
Query: 493 KFMANNP 499
MA +P
Sbjct: 283 --MARDP 287
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 240 FVLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRE 299
FV+ + E++ EI TM L HP +V F E+ E ++ E MS E
Sbjct: 189 FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGG------E 240
Query: 300 TFG--SRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNI-YLKARSMEGYFHV 356
F + N S V+ M Q+ +G+ +H H +L P NI + RS E +
Sbjct: 241 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE----L 296
Query: 357 KVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADV 416
K+ FGL+ + P S + T + APEV AE + G + D+
Sbjct: 297 KLIDFGLT------AHLDPKQSVKVTTGTAEFA--APEV-AEGKPVGYYT--------DM 339
Query: 417 YSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+S G+L + LL+G PF G D+ +N+++
Sbjct: 340 WSVGVLSYILLSGLSPF--GGENDDETLRNVKS 370
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ + +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M S+ +P++ + L G C + L+ +LM L Y+RE +++
Sbjct: 67 EAYVMASVDNPHVCR-LLGICLTSTVQ--LITQLMPFGCLLDYVRE-----HKDNIGSQY 118
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+++ +QIA+GM +L +++ H +L N+ +K HVK++ FG + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKITDFGRAKLLGAEEKE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
+ P W A E + + T ++DV+S+G+ +EL+T G P
Sbjct: 174 Y-----HAEGGKVPIKWMALESILHRIYT---------HQSDVWSYGVTVWELMTFGSKP 219
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIK 492
+ DG + +++ + GER P + + KCW + RP F + I+ + K
Sbjct: 220 Y-DG-IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL--IIEFSK 275
Query: 493 KFMANNP 499
MA +P
Sbjct: 276 --MARDP 280
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 42/188 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + ++H NI+ L F EE ++ +LVMELM +L C + R S+
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIHMELDHERMSY- 128
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL ART A
Sbjct: 129 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGL--ART-A 174
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
S N PY+ + APEV+ G G E D++S G + EL
Sbjct: 175 STN---------FMMTPYVVTRYYRAPEVIL---GMGY------KENVDIWSVGCIMGEL 216
Query: 427 LTGKVPFE 434
+ G V F+
Sbjct: 217 VKGSVIFQ 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 108 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 162
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ A
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRAGYYR- 218
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 219 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 265
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 266 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 322
Query: 495 MANNPDIARSEF 506
+PD+ +
Sbjct: 323 ---DPDVINTAL 331
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ + +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDAT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 50/221 (22%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMEL-----MSKDLSCYMRETFG 302
++E + E+ M L HPNI + + DE+ LVMEL + L+ ++ ++ G
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQY--ICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 303 --------------------------SRRRNSFSL----PVVVDIMLQIARGMEFLHAQK 332
R S ++ +IM QI + +LH Q
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 333 IYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYA 392
I H ++ P N S F +K+ FGLS + + N A PY + A
Sbjct: 189 ICHRDIKPENFLF---STNKSFEIKLVDFGLS--KEFYKLNNGEYYGMTTKAGTPY-FVA 242
Query: 393 PEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
PEVL +T+ K D +S G+L LL G VPF
Sbjct: 243 PEVL-------NTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK----DLSCYMRETFGSRRRN 307
+ EI + HP+I++ + F+VME +S D C R
Sbjct: 63 IRREIQNLKLFRHPHIIKLYQVI--STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR 120
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F QI G+++ H + H +L P N+ L A + + K++ FGLS
Sbjct: 121 LFQ---------QILSGVDYCHRHMVVHRDLKPENVLLDA-----HMNAKIADFGLSNMM 166
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ +PN + APEV++ + G + D++S G++ + LL
Sbjct: 167 SDGEFLRXSCG-----SPN---YAAPEVISGRLYAGP--------EVDIWSSGVILYALL 210
Query: 428 TGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSS 483
G +PF+D H+ + K I G +F +P+YL ++L K +P +R +
Sbjct: 211 CGTLPFDDDHVP--TLFKKICDG---IF--YTPQYLNPSVISLLKHMLQVDPMKRATIKD 263
Query: 484 I 484
I
Sbjct: 264 I 264
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRN 307
L+ L E+ L+HPNIV+ E +K +LV E S ++ Y+ + +
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE 114
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI +++ H + I H +L N+ L A ++K++ FG S
Sbjct: 115 ARAK------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADX-----NIKIADFGFSNEF 163
Query: 368 TYASR-----NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
T+ ++ PP + APE+ ++ G + DV+S G++
Sbjct: 164 TFGNKLDAFCGAPP-------------YAAPELFQGKKYDGP--------EVDVWSLGVI 202
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGER-PLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+ L++G +PF DG + + +R R P + S + NL KK NPS+R +
Sbjct: 203 LYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCE---NLLKKFLILNPSKRGTL 258
Query: 482 SSICRILRYIKKFMANNPDIARSEFQSPLADYCD 515
I + + + D + PL DY D
Sbjct: 259 EQIXK----DRWXNVGHEDDELKPYVEPLPDYKD 288
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 35/250 (14%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQ 320
+H NIV+ C + F+++ELM+ DL ++RET R R S + + +L
Sbjct: 131 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRET---RPRPSQPSSLAMLDLLH 185
Query: 321 IAR----GMEFLHAQKIYHGELNPSNIYLKARSMEGYFHV-KVSGFGLSTARTYASRNTP 375
+AR G ++L H ++ N L + G V K+ FG++ A
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLL---TCPGPGRVAKIGDFGMARDIYRAGYYR- 241
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVPFE 434
+ A P W PE E T K D +SFG+L +E+ + G +P+
Sbjct: 242 ----KGGCAMLPVKWMPPEAFMEGIFT---------SKTDTWSFGVLLWEIFSLGYMPYP 288
Query: 435 DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKF 494
Q ++ + + +G R P P + + +CW P RP+F+ I + Y +
Sbjct: 289 SKSNQ--EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ- 345
Query: 495 MANNPDIARS 504
+PD+ +
Sbjct: 346 ---DPDVINT 352
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L ++ R +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 241 VLRHFYGELESLNA--EISTMLSLSHPNIVQYLCGFCDEEK----KEFFLVMELMSKDLS 294
+ R F EL + A E+ + + H N++ L F +E +F+LVM M DL
Sbjct: 58 LYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLG 117
Query: 295 CYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYF 354
M+ R F ++ Q+ +G+ ++HA I H +L P N+ +
Sbjct: 118 KLMKHEKLGEDRIQF-------LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC----- 165
Query: 355 HVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEK 413
+K+ FGL AR S + WY APEV+ + + ++
Sbjct: 166 ELKILDFGL--ARQADSEMXGXVVTR---------WYRAPEVI--------LNWMRYTQT 206
Query: 414 ADVYSFGMLCFELLTGKVPFE 434
D++S G + E++TGK F+
Sbjct: 207 VDIWSVGCIMAEMITGKTLFK 227
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 49/242 (20%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK----DLSCYMRETFGSRRRN 307
+ EI + HP+I++ +FF+VME +S D C R
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F QI +++ H + H +L P N+ L A + + K++ FGLS
Sbjct: 116 LFQ---------QILSAVDYCHRHMVVHRDLKPENVLLDA-----HMNAKIADFGLSNMM 161
Query: 368 TYAS-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ T SP + APEV++ + G + D++S G++ + L
Sbjct: 162 SDGEFLRTSCGSPN---------YAAPEVISGRLYAGP--------EVDIWSCGVILYAL 204
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFS 482
L G +PF+D H+ + K IR G + P+YL L +P +R +
Sbjct: 205 LCGTLPFDDEHVP--TLFKKIRGGVFYI-----PEYLNRSVATLLMHMLQVDPLKRATIK 257
Query: 483 SI 484
I
Sbjct: 258 DI 259
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +LS ++ R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSR 304
G+ S+ EI+ + + HPNIV + E +L+M+L+S + + F +
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTE 115
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R S ++ Q+ +++LH I H +L P N L S++ + +S FGL
Sbjct: 116 RDAS-------RLIFQVLDAVKYLHDLGIVHRDLKPEN--LLYYSLDEDSKIMISDFGL- 165
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
S+ P S + P + APEVLA++ S+ D +S G++ +
Sbjct: 166 ------SKMEDPGSVLSTACGTPG-YVAPEVLAQK---------PYSKAVDCWSIGVIAY 209
Query: 425 ELLTGKVPFED 435
LL G PF D
Sbjct: 210 ILLCGYPPFYD 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYM----RETFGSRRRNSFS 310
EIS + L HP+I++ + +V+E +L Y+ R T RR
Sbjct: 59 EISYLKLLRHPHIIKLYDVIT--TPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRR---- 112
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
QI +E+ H KI H +L P N+ L + +VK++ FGLS T
Sbjct: 113 ------FFQQIICAIEYCHRHKIVHRDLKPENLLL-----DDNLNVKIADFGLSNIMTDG 161
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ T SP + APEV+ + G + DV+S G++ + +L G
Sbjct: 162 NFLKTSCGSPN---------YAAPEVINGKLYAGP--------EVDVWSCGIVLYVMLVG 204
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
++PF+D + N P F S + +L ++ +P QR + I R
Sbjct: 205 RLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQ---SLIRRMIVADPMQRITIQEI----R 257
Query: 490 YIKKFMANNPDIAR--SEFQSPLAD 512
F N PD R E Q AD
Sbjct: 258 RDPWFNVNLPDYLRPMEEVQGSYAD 282
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 282 FFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPS 341
F+LV E M + R N VVV +A ++FLH + I H +L P
Sbjct: 86 FYLVFEKMRG--GSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPE 140
Query: 342 NIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEG 401
NI + + VK+ FGL + +P ++P+ T + APEV+
Sbjct: 141 NILCEHPNQVS--PVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 402 TGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
S +C D++S G++ + LL+G PF
Sbjct: 199 EASIYDKRC----DLWSLGVILYILLSGYPPF 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSR 304
G+ S+ EI+ + + HPNIV + E +L+M+L+S + + F +
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTE 115
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R S ++ Q+ +++LH I H +L P N L S++ + +S FGL
Sbjct: 116 RDAS-------RLIFQVLDAVKYLHDLGIVHRDLKPEN--LLYYSLDEDSKIMISDFGL- 165
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
S+ P S + P + APEVLA++ S+ D +S G++ +
Sbjct: 166 ------SKMEDPGSVLSTACGTPG-YVAPEVLAQK---------PYSKAVDCWSIGVIAY 209
Query: 425 ELLTGKVPFED 435
LL G PF D
Sbjct: 210 ILLCGYPPFYD 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSR 304
G+ S+ EI+ + + HPNIV + E +L+M+L+S + + F +
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTE 115
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R S ++ Q+ +++LH I H +L P N L S++ + +S FGL
Sbjct: 116 RDAS-------RLIFQVLDAVKYLHDLGIVHRDLKPEN--LLYYSLDEDSKIMISDFGL- 165
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
S+ P S + P + APEVLA++ S+ D +S G++ +
Sbjct: 166 ------SKMEDPGSVLSTACGTPG-YVAPEVLAQK---------PYSKAVDCWSIGVIAY 209
Query: 425 ELLTGKVPFED 435
LL G PF D
Sbjct: 210 ILLCGYPPFYD 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRR 306
ELE EI + + HP IV+ L + + K ++++E + M E
Sbjct: 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLEL-----D 111
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ P + + Q+ + FLH+++I H +L N+ + ++EG ++++ FG+S
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEG--DIRLADFGVS-- 164
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++N ++ PY W APEV+ + + + KAD++S G+ E+
Sbjct: 165 ----AKNLKTLQKRDSFIGTPY-WMAPEVVMCE----TMKDTPYDYKADIWSLGITLIEM 215
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP--LFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P + L ++ I + P L PS + K NP RPS + +
Sbjct: 216 AQIEPPHHE--LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 249 LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRR--- 305
L+ L E+ M L+HPNIV+ E +K +LVME S G +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 115
Query: 306 -RNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R F QI +++ H + I H +L N+ L +G ++K++ FG S
Sbjct: 116 ARAKFR---------QIVSAVQYCHQKYIVHRDLKAENLLL-----DGDMNIKIADFGFS 161
Query: 365 TARTYASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
T ++ +T SP PY APE+ ++ G + DV+S G++
Sbjct: 162 NEFTVGNKLDTFCGSP-------PYA--APELFQGKKYDGP--------EVDVWSLGVIL 204
Query: 424 FELLTGKVPFEDGHLQ 439
+ L++G +PF+ +L+
Sbjct: 205 YTLVSGSLPFDGQNLK 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L ++ R +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPEVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMIKGG 222
Query: 431 VPF 433
V F
Sbjct: 223 VLF 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD--LSCYMRETFGSR 304
G+ S+ EI+ + + HPNIV + E +L+M+L+S + + F +
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTE 115
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R S ++ Q+ +++LH I H +L P N L S++ + +S FGL
Sbjct: 116 RDAS-------RLIFQVLDAVKYLHDLGIVHRDLKPEN--LLYYSLDEDSKIMISDFGL- 165
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
S+ P S + P + APEVLA++ S+ D +S G++ +
Sbjct: 166 ------SKMEDPGSVLSTACGTPG-YVAPEVLAQK---------PYSKAVDCWSIGVIAY 209
Query: 425 ELLTGKVPFED 435
LL G PF D
Sbjct: 210 ILLCGYPPFYD 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRR 306
ELE EI + + HP IV+ L + + K ++++E + M E
Sbjct: 51 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLEL-----D 103
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ P + + Q+ + FLH+++I H +L N+ + ++EG ++++ FG+S
Sbjct: 104 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEG--DIRLADFGVS-- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
++N ++ PY W APEV+ + + + KAD++S G+ E+
Sbjct: 157 ----AKNLKTLQKRDSFIGTPY-WMAPEVVMCE----TMKDTPYDYKADIWSLGITLIEM 207
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP--LFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P + L ++ I + P L PS + K NP RPS + +
Sbjct: 208 AQIEPPHHE--LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 265
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L+ H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 73 EIKILLAFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 129 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 176
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 177 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 223
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 224 LSNRPIFPGKH 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 27/185 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPNI+ + E + + L++EL+S +L ++ + + S
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQ------KES 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
S + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI-PIPHIKLIDFGL----- 165
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
A I+ PE +A + + +AD++S G++ + LL+
Sbjct: 166 --------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYILLS 213
Query: 429 GKVPF 433
G PF
Sbjct: 214 GASPF 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 109
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 168
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 169 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 210
Query: 428 TGKVPF 433
+G PF
Sbjct: 211 SGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 109
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 168
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 169 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 210
Query: 428 TGKVPF 433
+G PF
Sbjct: 211 SGASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L ++ R +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-- 123
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 124 ------LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT-----LKILDFGLARTAGTS 172
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 173 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMVRHK 215
Query: 431 VPF 433
+ F
Sbjct: 216 ILF 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMIKGG 222
Query: 431 VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
V F G D+ K I P SP+++ L T RP ++
Sbjct: 223 VLFP-GTDHIDQWNKVIEQLGTP-----SPEFMKKLQPTV-RTYVENRPKYA 267
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRRNSFSLPV 313
E M + P V L G C + LV +LM L ++RE G R S L
Sbjct: 69 EAYVMAGVGSP-YVSRLLGICLTSTVQ--LVTQLMPYGCLLDHVRENRG--RLGSQDL-- 121
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
++ +QIA+GM +L ++ H +L N+ +K+ + HVK++ FGL AR
Sbjct: 122 -LNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPN-----HVKITDFGL--ARLLDIDE 173
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT-GKVP 432
T + + P W A E S + + ++DV+S+G+ +EL+T G P
Sbjct: 174 TEYHADGGKV---PIKWMALE---------SILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF----SSICRIL 488
+ DG + ++ + GER P + + KCW + RP F S R+
Sbjct: 222 Y-DG-IPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279
Query: 489 RYIKKFMA-NNPDIARSEFQSPL 510
R ++F+ N D+ + SPL
Sbjct: 280 RDPQRFVVIQNEDLGPA---SPL 299
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 186 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 240
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L ++ + +K++ FG S
Sbjct: 241 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGET 295
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 296 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 340
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 341 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 391
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 200 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 254
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L ++ + +K++ FG S
Sbjct: 255 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGET 309
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 310 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 354
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 355 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 405
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 43/247 (17%)
Query: 264 HPNIVQYLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVV-----VDI 317
HPN+++Y +C E F ++ +EL + +L ++ S+ + +L + + +
Sbjct: 68 HPNVIRY---YCSETTDRFLYIALELCNLNL----QDLVESKNVSDENLKLQKEYNPISL 120
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSM--------EGYFHVKVSGFGL--STAR 367
+ QIA G+ LH+ KI H +L P NI + S + +S FGL
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+S T +P + W APE+L +E + + + D++S G + + +L
Sbjct: 181 GQSSFRTNLNNPSGTSG-----WRAPELL--EESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 428 T-GKVPFEDGHLQGDKMTKNIRA-------GERPLFPSGSPKYLVNLTKKCWHTNPSQRP 479
+ GK PF D + + + + I + +R L + +L + +P +RP
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT-----DLISQMIDHDPLKRP 288
Query: 480 SFSSICR 486
+ + R
Sbjct: 289 TAMKVLR 295
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 60 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 114
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L S E +K++ FG S
Sbjct: 115 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLS--SQEEDCLIKITDFGHSKILGET 169
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 170 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 214
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 215 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 265
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMIKGG 222
Query: 431 VPF 433
V F
Sbjct: 223 VLF 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 61 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 115
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L S E +K++ FG S
Sbjct: 116 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLS--SQEEDCLIKITDFGHSKILGET 170
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 171 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 216 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 180
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ G
Sbjct: 181 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMIKGG 223
Query: 431 VPF 433
V F
Sbjct: 224 VLF 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 31/244 (12%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKD-LSCYMRETFGSRRR 306
ELE EI + S HPNIV+ L F E ++++E + + M E R
Sbjct: 50 ELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWILIEFCAGGAVDAVMLEL--ERPL 105
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST- 365
+ VV Q + +LH KI H +L NI +++G +K++ FG+S
Sbjct: 106 TESQIQVVCK---QTLDALNYLHDNKIIHRDLKAGNILF---TLDG--DIKLADFGVSAK 157
Query: 366 -ARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
RT R ++ PY W APEV+ + ++ KADV+S G+
Sbjct: 158 NTRTXIQR-------RDSFIGTPY-WMAPEVVMCE----TSKDRPYDYKADVWSLGITLI 205
Query: 425 ELLTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWHTNPSQRPSFS 482
E+ + P + L ++ I E P PS + KKC N R + S
Sbjct: 206 EMAEIEPPHHE--LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 263
Query: 483 SICR 486
+ +
Sbjct: 264 QLLQ 267
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 168
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 169 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 217
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 218 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 260
Query: 431 VPF 433
+ F
Sbjct: 261 ILF 263
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 61 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 115
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L S E +K++ FG S
Sbjct: 116 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLS--SQEEDCLIKITDFGHSKILGET 170
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 171 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 216 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ +LV LM DL ++ S
Sbjct: 91 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 147 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKICDFGLARVA 194
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 195 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 241
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 242 LSNRPIFPGKH 252
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 61 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 115
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L S E +K++ FG S
Sbjct: 116 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLS--SQEEDCLIKITDFGHSKILGET 170
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 171 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 216 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 130 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 178
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 179 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 221
Query: 431 VPF 433
+ F
Sbjct: 222 ILF 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 71 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 127 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKICDFGLARVA 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 175 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 221
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 222 LSNRPIFPGKH 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 124
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 173
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 174 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 216
Query: 431 VPF 433
+ F
Sbjct: 217 ILF 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 168
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 169 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 217
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 218 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 260
Query: 431 VPF 433
+ F
Sbjct: 261 ILF 263
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 71 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ L QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 127 CYFL-------YQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKIXDFGLARVA 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 175 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKG--------YTKSIDIWSVGCILAEM 221
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 222 LSNRPIFPGKH 232
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 180
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 181 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 223
Query: 431 VPF 433
+ F
Sbjct: 224 ILF 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 132 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 180
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 181 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 223
Query: 431 VPF 433
+ F
Sbjct: 224 ILF 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 79 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 134
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 135 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 182
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 183 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 229
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 230 LSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 71 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 127 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 175 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 221
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 222 LSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 71 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 127 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKICDFGLARVA 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 175 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 221
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 222 LSNRPIFPGKH 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L ++ R +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT-----LKILDFGLARTAGTS 179
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 180 FMMTPYVVTR--------YYRAPEVIL---GMG------YKENVDIWSVGCIMGEMVRHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E++ + + HPNI+ F E K + L++EL+S +L ++ E + S
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 104
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + QI G+ +LH+++I H +L P NI L +++ +K+ FG++
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP-RIKLIDFGIA---- 159
Query: 369 YASRNTPPASPQNQTAPNPY--IWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A N + I+ PE +A + + +AD++S G++ + L
Sbjct: 160 -----------HKIEAGNEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 204
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 205 LSGASPF 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EIS M L HP ++ F E+K E L++E +S E F +
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAF--EDKYEMVLILEFLSGG------ELFDRIAAEDYK 145
Query: 311 L--PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ V++ M Q G++ +H I H ++ P NI + + VK+ FGL+T
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS---VKIIDFGLAT--- 199
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+ P + TA + APE++ ++E G + D+++ G+L + LL+
Sbjct: 200 ---KLNPDEIVKVTTATAEFA--APEIV-DREPVGFYT--------DMWAIGVLGYVLLS 245
Query: 429 GKVPF 433
G PF
Sbjct: 246 GLSPF 250
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 71 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 127 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 175 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 221
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 222 LSNRPIFPGKH 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 123
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 124 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 172
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 173 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 215
Query: 431 VPF 433
+ F
Sbjct: 216 ILF 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 106
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 107 SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNG-----ELKIADFGWSVH 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R+T + + PE++ EG EK D++S G+LC+E
Sbjct: 162 APSSRRDTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 203
Query: 427 LTGKVPFE 434
L G PFE
Sbjct: 204 LVGMPPFE 211
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ +LVMELM +L C + + R S+
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIQMELDHERMSY- 124
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 173
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 174 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVRHK 216
Query: 431 VPF 433
+ F
Sbjct: 217 ILF 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK L L C ++ R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEK----LYFGLSYAKNGCLLKYI---RKIGSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 181
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S SK S D+++ G + ++L+ G
Sbjct: 182 --LSPESKQARANSFVGTAQYVSPELLTEK------SASKSS---DLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L++EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-----NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
+ + TP + APE++ + +AD++S G++
Sbjct: 170 FGNEFKNIFGTPA-------------FVAPEIV---------NYEPLGLEADMWSIGVIT 207
Query: 424 FELLTGKVPF 433
+ LL+G PF
Sbjct: 208 YILLSGASPF 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTX-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 76 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 132 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 179
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 180 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 226
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 227 LSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 77 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 132
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 133 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 180
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 181 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 227
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 228 LSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 68 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 123
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 124 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 171
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 172 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 218
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 219 LSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 69 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 125 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 172
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 173 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 219
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 220 LSNRPIFPGKH 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 73 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 129 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 176
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 177 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 223
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 224 LSNRPIFPGKH 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 69 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 125 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 172
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 173 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 219
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 220 LSNRPIFPGKH 230
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 36/243 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGF--CDEEKKEFFLVMEL-MSKDLSCYMRETFGSR 304
E + E + L HPNIV++ + + KK LV EL S L Y++
Sbjct: 68 ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK------ 121
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQK--IYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
R + V+ QI +G++FLH + I H +L NI++ + VK+ G
Sbjct: 122 RFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG----SVKIGDLG 177
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
L+T + + +P+ + APE E K E DVY+FG
Sbjct: 178 LATLKRASFAKAVIGTPE---------FXAPEXYEE----------KYDESVDVYAFGXC 218
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPL-FPSGSPKYLVNLTKKCWHTNPSQRPSF 481
E T + P+ + ++ + + +G +P F + + + + C N +R S
Sbjct: 219 XLEXATSEYPYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI 277
Query: 482 SSI 484
+
Sbjct: 278 KDL 280
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E++ + + HPNI+ F E K + L++EL+S +L ++ E + S
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 125
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + QI G+ +LH+++I H +L P NI L +++ +K+ FG++
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP-RIKLIDFGIA---- 180
Query: 369 YASRNTPPASPQNQTAPNPY--IWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A N + I+ PE +A + + +AD++S G++ + L
Sbjct: 181 -----------HKIEAGNEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 225
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 226 LSGASPF 232
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
++ EI + L+HP I++ + F D E ++++V+ELM + G++R +
Sbjct: 67 NVETEIEILKKLNHPCIIK-IKNFFDAE--DYYIVLELMEG--GELFDKVVGNKRLKEAT 121
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ Q+ +++LH I H +L P N+ L S E +K++ FG S
Sbjct: 122 CKLY---FYQMLLAVQYLHENGIIHRDLKPENVLLS--SQEEDCLIKITDFGHSKILGET 176
Query: 371 S-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S T +P + APEVL S T+ + D +S G++ F L+G
Sbjct: 177 SLMRTLCGTPT---------YLAPEVLV------SVGTAGYNRAVDCWSLGVILFICLSG 221
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFP---SGSPKYLVNLTKKCWHTNPSQR 478
PF + H + I +G+ P + + ++L KK +P R
Sbjct: 222 YPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E++ + + HPNI+ F E K + L++EL+S +L ++ E + S
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAE------KES 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + QI G+ +LH+++I H +L P NI L +++ +K+ FG++
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP-RIKLIDFGIA---- 166
Query: 369 YASRNTPPASPQNQTAPNPY--IWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A N + I+ PE +A + + +AD++S G++ + L
Sbjct: 167 -----------HKIEAGNEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 47/241 (19%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK----DLSCYMRETFGSRRRN 307
+ EI + HP+I++ +FF+VME +S D C R
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F QI +++ H + H +L P N+ L A + + K++ FGLS
Sbjct: 116 LFQ---------QILSAVDYCHRHMVVHRDLKPENVLLDA-----HMNAKIADFGLSNMM 161
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ +PN + APEV++ + G + D++S G++ + LL
Sbjct: 162 SDGEFLRDSCG-----SPN---YAAPEVISGRLYAGP--------EVDIWSCGVILYALL 205
Query: 428 TGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYL----VNLTKKCWHTNPSQRPSFSS 483
G +PF+D H+ + K IR G + P+YL L +P +R +
Sbjct: 206 CGTLPFDDEHVP--TLFKKIRGGVFYI-----PEYLNRSVATLLMHMLQVDPLKRATIKD 258
Query: 484 I 484
I
Sbjct: 259 I 259
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 91 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 146
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ L QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 147 CYFL-------YQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 194
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 195 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 241
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 242 LSNRPIFPGKH 252
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 264 HPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQIA 322
HP+I+ + + E FLV +LM K +L Y+ E + + S IM +
Sbjct: 159 HPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRS------IMRSLL 210
Query: 323 RGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQ 382
+ FLHA I H +L P NI L + +++S FG S + P +
Sbjct: 211 EAVSFLHANNIVHRDLKPENILL-----DDNMQIRLSDFGFSC-------HLEPGEKLRE 258
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
P + APE+L + + + ++ D+++ G++ F LL G PF
Sbjct: 259 LCGTPG-YLAPEIL---KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G L E+ L HPNI++ F D + +L++E L RE ++
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAP--LGTVYREL---QKL 106
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+ F + ++A + + H++++ H ++ P N+ L + +K++ FG S
Sbjct: 107 SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNG-----ELKIADFGWSVH 161
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ R T + + PE++ EG EK D++S G+LC+E
Sbjct: 162 APSSRRTTLCGTLD---------YLPPEMI---EG------RMHDEKVDLWSLGVLCYEF 203
Query: 427 LTGKVPFE 434
L G PFE
Sbjct: 204 LVGMPPFE 211
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLXEXVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 76 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 132 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 179
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T T WY APE++ +G ++ D++S G + E+
Sbjct: 180 DPDHDHTGFLXEXVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 226
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 227 LSNRPIFPGKH 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 266 NIVQYLCGFCDEEKKEFFLVME-LMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARG 324
NI++ + F D+ + F+LV E L + +++ ++ F+ ++ +A
Sbjct: 72 NILELIEFFEDDTR--FYLVFEKLQGGSILAHIQ------KQKHFNEREASRVVRDVAAA 123
Query: 325 MEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTA 384
++FLH + I H +L P NI S E VK+ F L + + TP +P+ T
Sbjct: 124 LDFLHTKGIAHRDLKPENIL--CESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 385 PNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGD 441
+ APEV+ + +C D++S G++ + +L+G PF GH D
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRC----DLWSLGVVLYIMLSGYPPFV-GHCGAD 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 42/188 (22%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + ++H NI+ L F EE ++ +LVMELM +L C + R S+
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVIHMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL ART
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGL--ARTAC 177
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ PY+ + APEV+ G G + D++S G + EL
Sbjct: 178 T----------NFMMTPYVVTRYYRAPEVIL---GMGYAAN------VDIWSVGCIMGEL 218
Query: 427 LTGKVPFE 434
+ G V F+
Sbjct: 219 VKGCVIFQ 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ GFGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILGFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 255 EISTM-LSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSFSLP 312
EI+ + L HPNIV+ F D+ FLVMEL++ E F +++ FS
Sbjct: 55 EITALKLCEGHPNIVKLHEVFHDQLHT--FLVMELLNGG------ELFERIKKKKHFSET 106
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
IM ++ + +H + H +L P N+ + +K+ FG + R
Sbjct: 107 EASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN--DNLEIKIIDFGFA-------R 157
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
PP + +T + APE+L Q G E D++S G++ + +L+G+VP
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELL-NQNGY--------DESCDLWSLGVILYTMLSGQVP 208
Query: 433 FE 434
F+
Sbjct: 209 FQ 210
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD-------EEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI +L H NI+ G D E+ K+ ++V +LM DL ++ S
Sbjct: 75 EIKILLRFRHENII----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI 130
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + QI RG++++H+ + H +L PSN+ L +K+ FGL+
Sbjct: 131 CY-------FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DLKICDFGLARVA 178
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+T + T WY APE++ +G ++ D++S G + E+
Sbjct: 179 DPDHDHTGFLTEYVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEM 225
Query: 427 LTGKVPFEDGH 437
L+ + F H
Sbjct: 226 LSNRPIFPGKH 236
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + S +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 CRHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 132
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 179
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 180 --LSPESKQARANAFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 228
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 229 LPPFRAGN 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRR------ 306
AE+ TML H +IV++ G C E + +V E M DL+ ++R + G +
Sbjct: 71 AELLTMLQ--HQHIVRFF-GVCTE-GRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGE 125
Query: 307 ----NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
L ++ + Q+A GM +L H +L N + + VK+ FG
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV-----VKIGDFG 180
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGML 422
+S R S + + P W PE S K + ++DV+SFG++
Sbjct: 181 MS--RDIYSTDYYRVGGRTML---PIRWMPPE---------SILYRKFTTESDVWSFGVV 226
Query: 423 CFELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ T GK P+ L + I G P P + + + CW P QR S
Sbjct: 227 LWEIFTYGKQPWY--QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSI 284
Query: 482 SSI 484
+
Sbjct: 285 KDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 36/242 (14%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR------- 306
AE+ TML H +IV++ G C E + + + DL+ ++R + G +
Sbjct: 65 AELLTMLQ--HQHIVRFF-GVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGED 120
Query: 307 ---NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
L ++ + Q+A GM +L H +L N + + VK+ FG+
Sbjct: 121 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV-----VKIGDFGM 175
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S R S + + P W PE S K + ++DV+SFG++
Sbjct: 176 S--RDIYSTDYYRVGGRTML---PIRWMPPE---------SILYRKFTTESDVWSFGVVL 221
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T GK P+ L + I G P P + + + CW P QR S
Sbjct: 222 WEIFTYGKQPWY--QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 279
Query: 483 SI 484
+
Sbjct: 280 DV 281
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKVL----- 182
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S+ D+++ G + ++L+ G
Sbjct: 183 ---SPESKQARANXFVGTAQYVSPELLTEKSAXKSS---------DLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNS 308
E + E+S + + HPN++ + E K + L+ EL++ +L ++ E + S
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILIGELVAGGELFDFLAE------KES 110
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
+ + + QI G+ +LH+ +I H +L P NI L R++ +K+ FGL+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP-RIKIIDFGLAHKID 169
Query: 369 YASR-NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ + +P+ + APE++ + +AD++S G++ + LL
Sbjct: 170 FGNEFKNIFGTPE---------FVAPEIV---------NYEPLGLEADMWSIGVITYILL 211
Query: 428 TGKVPF 433
+G PF
Sbjct: 212 SGASPF 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKVL----- 182
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 183 ---SPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 258 TMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDI 317
M S P IVQ+ E + ++ MELMS + + + S + ++ I
Sbjct: 74 VMRSSDCPYIVQFYGALFRE--GDCWICMELMSTSFDKFYKYVY-SVLDDVIPEEILGKI 130
Query: 318 MLQIARGMEFLHAQ-KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPP 376
L + + L KI H ++ PSNI L ++K+ FG+S + T
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDRSG-----NIKLCDFGISGQLVDSIAKTRD 185
Query: 377 ASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDG 436
A + PY+ APE + S S ++DV+S G+ +EL TG+ P+
Sbjct: 186 AGCR------PYM--APERI-----DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232
Query: 437 HLQGDKMTKNIRAGERPLFPSG-----SPKYLVNLTKKCWHTNPSQRPSFSSICR---IL 488
+ D++T+ ++ G+ P + SP + +N C + S+RP + + + IL
Sbjct: 233 NSVFDQLTQVVK-GDPPQLSNSEEREFSPSF-INFVNLCLTKDESKRPKYKELLKHPFIL 290
Query: 489 RY 490
Y
Sbjct: 291 MY 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 243 RHFYGE--LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
RH E + + E M L HP V+ F D+EK F L + +L Y+R+
Sbjct: 43 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI 101
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
SF +I +E+LH + I H +L P NI L H++++
Sbjct: 102 ------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITD 150
Query: 361 FGLSTARTYASRNTPPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKAD 415
FG TA+ SP+++ A N ++ + +PE+L E+ S C + +D
Sbjct: 151 FG--TAKV--------LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSD 191
Query: 416 VYSFGMLCFELLTGKVPFEDGH 437
+++ G + ++L+ G PF G+
Sbjct: 192 LWALGCIIYQLVAGLPPFRAGN 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 181
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 182 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 243 RHFYGE--LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
RH E + + E M L HP V+ F D+EK F L + +L Y+R+
Sbjct: 45 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI 103
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
SF +I +E+LH + I H +L P NI L H++++
Sbjct: 104 ------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITD 152
Query: 361 FGLSTARTYASRNTPPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKAD 415
FG TA+ SP+++ A N ++ + +PE+L E+ S+ D
Sbjct: 153 FG--TAKV--------LSPESKQARANXFVGTAQYVSPELLTEKSACKSS---------D 193
Query: 416 VYSFGMLCFELLTGKVPFEDGH 437
+++ G + ++L+ G PF G+
Sbjct: 194 LWALGCIIYQLVAGLPPFRAGN 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 132
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 179
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 180 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 228
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 229 LPPFRAGN 236
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL AR A
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL--ARHTA 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
T + + WY APE++ T D++S G + ELLTG
Sbjct: 184 DEMTGYVATR---------WYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 226
Query: 430 KVPF 433
+ F
Sbjct: 227 RTLF 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 243 RHFYGE--LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
RH E + + E M L HP V+ F D+EK F L + +L Y+R+
Sbjct: 44 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI 102
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
SF +I +E+LH + I H +L P NI L H++++
Sbjct: 103 ------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITD 151
Query: 361 FGLSTARTYASRNTPPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKAD 415
FG TA+ SP+++ A N ++ + +PE+L E+ S+ D
Sbjct: 152 FG--TAKV--------LSPESKQARANXFVGTAQYVSPELLTEKSACKSS---------D 192
Query: 416 VYSFGMLCFELLTGKVPFEDGH 437
+++ G + ++L+ G PF G+
Sbjct: 193 LWALGCIIYQLVAGLPPFRAGN 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 135
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 182
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 183 --LSPESKQARANSFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 231
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 232 LPPFRAGN 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK +F + + +L Y+R+ SF
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKL-YFGLSYAKNGELLKYIRKI------GSFDETCT 132
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 179
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 180 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 228
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 229 LPPFRAGN 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 181
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 182 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 132
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 179
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 180 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 228
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 229 LPPFRAGN 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 135
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 182
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 183 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 231
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 232 LPPFRAGN 239
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL AR A
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL--ARHTA 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
T + + WY APE++ T D++S G + ELLTG
Sbjct: 184 DEMTGYVATR---------WYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 226
Query: 430 KVPF 433
+ F
Sbjct: 227 RTLF 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 243 RHFYGE--LESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
RH E + + E M L HP V+ F D+EK F L + +L Y+R+
Sbjct: 46 RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI 104
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
SF +I +E+LH + I H +L P NI L H++++
Sbjct: 105 ------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITD 153
Query: 361 FGLSTARTYASRNTPPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKAD 415
FG TA+ SP+++ A N ++ + +PE+L E+ S+ D
Sbjct: 154 FG--TAKV--------LSPESKQARANXFVGTAQYVSPELLTEKSACKSS---------D 194
Query: 416 VYSFGMLCFELLTGKVPFEDGH 437
+++ G + ++L+ G PF G+
Sbjct: 195 LWALGCIIYQLVAGLPPFRAGN 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL AR A
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL--ARHTA 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
T + + WY APE++ T D++S G + ELLTG
Sbjct: 184 DEMTGYVATR---------WYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 226
Query: 430 KVPF 433
+ F
Sbjct: 227 RTLF 230
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 49/250 (19%)
Query: 264 HPNIVQYLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVV-----VDI 317
HPN+++Y +C E F ++ +EL + +L ++ S+ + +L + + +
Sbjct: 68 HPNVIRY---YCSETTDRFLYIALELCNLNL----QDLVESKNVSDENLKLQKEYNPISL 120
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSM--------EGYFHVKVSGFGL-----S 364
+ QIA G+ LH+ KI H +L P NI + S + +S FGL S
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
+ P+ W APE+L +E + + + D++S G + +
Sbjct: 181 GQXXFRXNLNNPSGTSG--------WRAPELL--EESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRA-------GERPLFPSGSPKYLVNLTKKCWHTNPS 476
+L+ GK PF D + + + + I + +R L + +L + +P
Sbjct: 231 YILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT-----DLISQMIDHDPL 285
Query: 477 QRPSFSSICR 486
+RP+ + R
Sbjct: 286 KRPTAMKVLR 295
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 132
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 133 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 181
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
P + + APEV+ G G E D++S G + E++ G
Sbjct: 182 FMMVPFVVTR--------YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMIKGG 224
Query: 431 VPF 433
V F
Sbjct: 225 VLF 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 181
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 182 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 230
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 231 LPPFRAGN 238
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + S +K+ FGL
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-----ELKILDFGL------- 173
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 174 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 221
Query: 430 KVPF 433
+ F
Sbjct: 222 RTLF 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 36/242 (14%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR------- 306
AE+ TML H +IV++ G C E + + + DL+ ++R + G +
Sbjct: 94 AELLTMLQ--HQHIVRFF-GVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGED 149
Query: 307 ---NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
L ++ + Q+A GM +L H +L N + + VK+ FG+
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV-----VKIGDFGM 204
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S R S + + P W PE S K + ++DV+SFG++
Sbjct: 205 S--RDIYSTDYYRVGGRTML---PIRWMPPE---------SILYRKFTTESDVWSFGVVL 250
Query: 424 FELLT-GKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ T GK P+ L + I G P P + + + CW P QR S
Sbjct: 251 WEIFTYGKQPWYQ--LSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 308
Query: 483 SI 484
+
Sbjct: 309 DV 310
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + L H N++ L F E+ E +LV LM DL+ ++ S F
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ RG++++H+ I H +L PSN+ + S +++ FGL+
Sbjct: 136 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-----ELRILDFGLAR----- 179
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ + T WY APE++ + ++ D++S G + ELL G
Sbjct: 180 ------QADEEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 430 KVPF 433
K F
Sbjct: 226 KALF 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 282 FFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPS 341
F+LV E M + R N VVV +A ++FLH + I H +L P
Sbjct: 86 FYLVFEKMRG--GSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPE 140
Query: 342 NIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEG 401
NI + + VK+ F L + +P ++P+ T + APEV+
Sbjct: 141 NILCEHPNQVS--PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 402 TGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
S +C D++S G++ + LL+G PF
Sbjct: 199 EASIYDKRC----DLWSLGVILYILLSGYPPF 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 137
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 184
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 185 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 233
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 234 LPPFRAGN 241
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + S +K+ FGL
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-----ELKILDFGL------- 177
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 178 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 225
Query: 430 KVPF 433
+ F
Sbjct: 226 RTLF 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 124
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 125 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 173
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 174 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDLWSVGCIMGEMVCHK 216
Query: 431 VPF 433
+ F
Sbjct: 217 ILF 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 116
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 117 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 163
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 164 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 212
Query: 430 KVPFEDG 436
PF G
Sbjct: 213 LPPFRAG 219
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 53/326 (16%)
Query: 231 KEIQWLGDSFVLRHFYGELESLNAEISTMLSLSHPNIV---QYLCGFCDEEKKEFFLVME 287
+ + L DSF+ + E+ LN HPNI+ F + + +LV E
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLN-------HFHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
Query: 288 LMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKA 347
LM DL+ + + +R S + M I G+ LH + H +L+P NI L
Sbjct: 115 LMRTDLAQVIHD-----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 348 RSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTS 406
+ + + F L+ T + N+T + WY APE++ + +G
Sbjct: 170 NN-----DITICDFNLAREDT---------ADANKTHYVTHRWYRAPELVMQFKG----- 210
Query: 407 TSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERP------LFPSGSP 460
++ D++S G + E+ K F G +++ K + P +F S S
Sbjct: 211 ---FTKLVDMWSAGCVMAEMFNRKALFR-GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSA 266
Query: 461 K-----YLVNLTKKCW-HTNPSQRP-SFSSICRILRYIKKFMANNPDIARSEFQSPLADY 513
+ L N+ + W P+ P + I ++L + + + R + L D
Sbjct: 267 RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP 326
Query: 514 CDIEAGFVRKF-VGEGCPDVAPVSQI 538
D+ G +F E DV + +I
Sbjct: 327 LDLTEGLSERFHFDESVTDVYDMHKI 352
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 53/326 (16%)
Query: 231 KEIQWLGDSFVLRHFYGELESLNAEISTMLSLSHPNIV---QYLCGFCDEEKKEFFLVME 287
+ + L DSF+ + E+ LN HPNI+ F + + +LV E
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLN-------HFHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
Query: 288 LMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKA 347
LM DL+ + + +R S + M I G+ LH + H +L+P NI L
Sbjct: 115 LMRTDLAQVIHD-----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 348 RSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTS 406
+ + + F L+ T + N+T + WY APE++ + +G
Sbjct: 170 NN-----DITICDFNLAREDT---------ADANKTHYVTHRWYRAPELVMQFKG----- 210
Query: 407 TSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERP------LFPSGSP 460
++ D++S G + E+ K F G +++ K + P +F S S
Sbjct: 211 ---FTKLVDMWSAGCVMAEMFNRKALFR-GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSA 266
Query: 461 K-----YLVNLTKKCW-HTNPSQRP-SFSSICRILRYIKKFMANNPDIARSEFQSPLADY 513
+ L N+ + W P+ P + I ++L + + + R + L D
Sbjct: 267 RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP 326
Query: 514 CDIEAGFVRKF-VGEGCPDVAPVSQI 538
D+ G +F E DV + +I
Sbjct: 327 LDLTEGLSERFHFDESVTDVYDMHKI 352
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 41/244 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI SL HPNIV++ +VME S + R R F
Sbjct: 60 ENVKREIINHRSLRHPNIVRFKEVIL--TPTHLAIVMEYASGG-ELFERICNAGR----F 112
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S Q+ G+ + HA ++ H +L N L +K++ FG S A
Sbjct: 113 SEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAP---RLKIADFGYSKASVL 169
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S+ P++ YI APEVL ++E G ADV+S G+ + +L G
Sbjct: 170 HSQ------PKSAVGTPAYI--APEVLLKKEYDGKV--------ADVWSCGVTLYVMLVG 213
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWH-------TNPSQRPS 480
PFED + KN R + P Y V+++ +C H +P++R S
Sbjct: 214 AYPFED-----PEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAKRIS 267
Query: 481 FSSI 484
I
Sbjct: 268 IPEI 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 131
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 178
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 179 --LSPESKQARANSFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 227
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 228 LPPFRAGN 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 131
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 178
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 179 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 227
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 228 LPPFRAGN 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E M L HP V+ F D+EK F L + +L Y+R+ SF
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYA-KNGELLKYIRKI------GSFDETCT 139
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+I +E+LH + I H +L P NI L H++++ FG TA+
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNED-----MHIQITDFG--TAKV------ 186
Query: 375 PPASPQNQTA-PNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
SP+++ A N ++ + +PE+L E+ S C + +D+++ G + ++L+ G
Sbjct: 187 --LSPESKQARANXFVGTAQYVSPELLTEK--------SAC-KSSDLWALGCIIYQLVAG 235
Query: 430 KVPFEDGH 437
PF G+
Sbjct: 236 LPPFRAGN 243
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL+ +
Sbjct: 136 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTS 184
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
TP + + APEV+ G G E D++S G + E++ K
Sbjct: 185 FMMTPYVVTR--------YYRAPEVIL---GMGY------KENVDLWSVGCIMGEMVCHK 227
Query: 431 VPF 433
+ F
Sbjct: 228 ILF 230
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + H NI+ F E +E ++ E +S L + R + N +
Sbjct: 51 EISILNIARHRNILHLHESF--ESMEELVMIFEFIS-GLDIFERINTSAFELNERE---I 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
V + Q+ ++FLH+ I H ++ P NI + R +K+ FG +R
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST---IKIIEFG-------QARQL 154
Query: 375 PPASPQNQ--TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
P TAP +YAPEV Q ST+T D++S G L + LL+G P
Sbjct: 155 KPGDNFRLLFTAPE---YYAPEV--HQHDVVSTAT-------DMWSLGTLVYVLLSGINP 202
Query: 433 F 433
F
Sbjct: 203 F 203
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL ART
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGL--ARTAG 177
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+ P+ T + APEV+ G G E D++S G + E++ K
Sbjct: 178 TSFM--MEPEVVTR----YYRAPEVIL---GMGY------KENVDIWSVGCIMGEMVCHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 53/250 (21%)
Query: 264 HPNIVQYLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVV-----VDI 317
HPN+++Y +C E F ++ +EL + +L ++ S+ + +L + + +
Sbjct: 86 HPNVIRY---YCSETTDRFLYIALELCNLNL----QDLVESKNVSDENLKLQKEYNPISL 138
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSM--------EGYFHVKVSGFGL-----S 364
+ QIA G+ LH+ KI H +L P NI + S + +S FGL S
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
+ P+ W APE+L E ++ + + D++S G + +
Sbjct: 199 GQXXFRXNLNNPSGTSG--------WRAPELLEE------STKRRLTRSIDIFSMGCVFY 244
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRA-------GERPLFPSGSPKYLVNLTKKCWHTNPS 476
+L+ GK PF D + + + + I + +R L + +L + +P
Sbjct: 245 YILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT-----DLISQMIDHDPL 299
Query: 477 QRPSFSSICR 486
+RP+ + R
Sbjct: 300 KRPTAMKVLR 309
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 72/187 (38%), Gaps = 26/187 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E M + P +VQ C F D+ K ++VME M DL M + F
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDD--KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAE 182
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
VV ++ +H+ + H ++ P N+ L H+K++ FG +
Sbjct: 183 VV-------LALDAIHSMGLIHRDVKPDNMLLDKHG-----HLKLADFGTCM------KM 224
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TA + +PEVL Q G G + D +S G+ FE+L G PF
Sbjct: 225 DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYG-----RECDWWSVGVFLFEMLVGDTPF 279
Query: 434 EDGHLQG 440
L G
Sbjct: 280 YADSLVG 286
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 53/250 (21%)
Query: 264 HPNIVQYLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVV-----VDI 317
HPN+++Y +C E F ++ +EL + +L ++ S+ + +L + + +
Sbjct: 86 HPNVIRY---YCSETTDRFLYIALELCNLNL----QDLVESKNVSDENLKLQKEYNPISL 138
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSM--------EGYFHVKVSGFGL-----S 364
+ QIA G+ LH+ KI H +L P NI + S + +S FGL S
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
+ P+ W APE+L E ++ + + D++S G + +
Sbjct: 199 GQXXFRXNLNNPSGTSG--------WRAPELLEE------STKRRLTRSIDIFSMGCVFY 244
Query: 425 ELLT-GKVPFEDGHLQGDKMTKNIRA-------GERPLFPSGSPKYLVNLTKKCWHTNPS 476
+L+ GK PF D + + + + I + +R L + +L + +P
Sbjct: 245 YILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT-----DLISQMIDHDPL 299
Query: 477 QRPSFSSICR 486
+RP+ + R
Sbjct: 300 KRPTAMKVLR 309
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFG---SR 304
+L + EI + +L H +I Q E + F+V+E C E F S+
Sbjct: 51 DLPRIKTEIEALKNLRHQHICQLYHVL--ETANKIFMVLEY------CPGGELFDYIISQ 102
Query: 305 RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
R S VV QI + ++H+Q H +L P N+ + Y +K+ FGL
Sbjct: 103 DRLSEEETRVV--FRQIVSAVAYVHSQGYAHRDLKPENLLF-----DEYHKLKLIDFGL- 154
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
A+ +++ QT + APE++ + GS +ADV+S G+L +
Sbjct: 155 CAKPKGNKDY-----HLQTCCGSLAYAAPELIQGKSYLGS--------EADVWSMGILLY 201
Query: 425 ELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
L+ G +PF+D ++ + K I G+ + SP ++ L ++ +P +R S ++
Sbjct: 202 VLMCGFLPFDDDNVMA--LYKKIMRGKYDVPKWLSPSSIL-LLQQMLQVDPKKRISMKNL 258
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 94/245 (38%), Gaps = 37/245 (15%)
Query: 250 ESLNAEISTMLSLSHPNIV-QYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRN 307
ES S M LSH ++V Y FC +E LV E + L Y++ + +N
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDEN---ILVQEFVKFGSLDTYLK-----KNKN 108
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYL---KARSMEGYFHVKVSGFGLS 364
++ +++ Q+A M FL + HG + NI L + R +K+S G+S
Sbjct: 109 CINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
P + P W PE + + + D +SFG +
Sbjct: 169 IT-------VLPKDILQERIP----WVPPECIENPKNLNLAT--------DKWSFGTTLW 209
Query: 425 ELLTGKVPFEDGHLQGDKMTKNIRAGE-RPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E+ +G D L + ++ E R P+ L NL C P RPSF +
Sbjct: 210 EICSGG----DKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRA 265
Query: 484 ICRIL 488
I R L
Sbjct: 266 IIRDL 270
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIM--------LNAMHYNQTVDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 34/183 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ M ++H NI+ L F EE ++ ++VMELM +L C + + R S+
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-CQVIQMELDHERMSY- 130
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ G++ LH+ I H +L PSNI +K+ +K+ FGL ART
Sbjct: 131 ------LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-----LKILDFGL--ARTAG 177
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+ P+ T + APEV+ G G E D++S G + E++ K
Sbjct: 178 TSFM--MEPEVVTR----YYRAPEVIL---GMGY------KENVDLWSVGCIMGEMVCHK 222
Query: 431 VPF 433
+ F
Sbjct: 223 ILF 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 262 LSHPNIVQYLCGFCDEE---KKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIM 318
+HPNI++ L +C E K E +L++ + E + N + ++ ++
Sbjct: 83 FNHPNILR-LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERL-KDKGNFLTEDQILWLL 140
Query: 319 LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPAS 378
L I RG+E +HA+ H +L P+NI L V + ++ A + + +
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP----VLMDLGSMNQACIHVEGSRQALT 196
Query: 379 PQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
Q+ A I Y APE+ + Q S E+ DV+S G + + ++ G+ P++
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQ------SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
Query: 438 LQGDKMTKNIRAGERPLFPSGSPKY---LVNLTKKCWHTNPSQRPSF 481
+GD + + + L SP++ L L +P QRP
Sbjct: 251 QKGDSVALAV---QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI 294
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L H NIV+ KK LV E + +DL + G +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK---- 103
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+LQ+ G+ + H +++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 104 -SFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREG--ELKIADFGLARAFGIPVR-- 155
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY AP+VL + K S D++S G + E++ G P
Sbjct: 156 ------KYTHEVVTLWYRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-APL 200
Query: 434 EDGHLQGDKMTKNIRAGERP 453
G + D++ + R P
Sbjct: 201 FPGVSEADQLMRIFRILGTP 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L H NIV+ KK LV E + +DL + G +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK---- 103
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+LQ+ G+ + H +++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 104 -SFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREG--ELKIADFGLARAFGIPVR-- 155
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY AP+VL + K S D++S G + E++ G P
Sbjct: 156 ------KYTHEVVTLWYRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-TPL 200
Query: 434 EDGHLQGDKMTKNIRAGERP 453
G + D++ + R P
Sbjct: 201 FPGVSEADQLMRIFRILGTP 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EIS + L H NIV+ KK LV E + +DL + G +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK---- 103
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+LQ+ G+ + H +++ H +L P N+ + + EG +K++ FGL+ A R
Sbjct: 104 -SFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREG--ELKIADFGLARAFGIPVR-- 155
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY AP+VL + K S D++S G + E++ G P
Sbjct: 156 ------KYTHEIVTLWYRAPDVL--------MGSKKYSTTIDIWSVGCIFAEMVNG-TPL 200
Query: 434 EDGHLQGDKMTKNIRAGERP 453
G + D++ + R P
Sbjct: 201 FPGVSEADQLMRIFRILGTP 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGXVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 140
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 141 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-----ELKILDFGL------- 182
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 183 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 230
Query: 430 KVPF 433
+ F
Sbjct: 231 RTLF 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-----ELKILDFGL------- 176
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 177 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 224
Query: 430 KVPF 433
+ F
Sbjct: 225 RTLF 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + L H N++ L F E+ E +LV LM DL+ ++ S F
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ RG++++H+ I H +L PSN+ + S +++ FGL+
Sbjct: 136 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS-----ELRILDFGLAR----- 179
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ + T WY APE++ + ++ D++S G + ELL G
Sbjct: 180 ------QADEEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 430 KVPF 433
K F
Sbjct: 226 KALF 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX-----ELKILDFGL------- 176
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 177 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 224
Query: 430 KVPF 433
+ F
Sbjct: 225 RTLF 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 25/251 (9%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
+L++ E+ H N+V ++ G C ++ L C R + R
Sbjct: 72 QLKAFKREVMAYRQTRHENVVLFM-GAC-MSPPHLAIITSL------CKGRTLYSVVRDA 123
Query: 308 SFSLPV--VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL-- 363
L V I +I +GM +LHA+ I H +L N++ V ++ FGL
Sbjct: 124 KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK------VVITDFGLFS 177
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
+ A R QN + APE++ + S+ +DV++ G +
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCH----LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGERP-LFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+EL + PF+ + + + G +P L G K + ++ CW +RP+F+
Sbjct: 234 YELHAREWPFKTQ--PAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFT 291
Query: 483 SICRILRYIKK 493
+ +L + K
Sbjct: 292 KLMDMLEKLPK 302
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF- 125
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 167
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 168 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 215
Query: 430 KVPF 433
+ F
Sbjct: 216 RTLF 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 265 PNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARG 324
P IVQ F + F+ MELM +C E R + ++ + + I +
Sbjct: 84 PYIVQCFGTFI--TNTDVFIAMELMG---TC--AEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 325 MEFLHAQK-IYHGELNPSNIYLKARSMEGYFHVKVSGFGLS------TARTYASRNTPPA 377
+ +L + + H ++ PSNI L R +K+ FG+S A+ ++
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERG-----QIKLCDFGISGRLVDDKAKDRSAGCAAYM 191
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
+P+ P+P + +ADV+S G+ EL TG+ P+++
Sbjct: 192 APERIDPPDP------------------TKPDYDIRADVWSLGISLVELATGQFPYKNCK 233
Query: 438 LQGDKMTKNIRAGERPLFPS--GSPKYLVNLTKKCWHTNPSQRPSFSSICRILRYIKKFM 495
+ +TK ++ E PL P G + K C + +RP ++ + +IK++
Sbjct: 234 TDFEVLTKVLQE-EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE-HSFIKRYE 291
Query: 496 ANNPDIARSEFQSPLA 511
D+A S F+ +A
Sbjct: 292 TLEVDVA-SWFKDVMA 306
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI SL HPNIV++ ++ME S Y R R F
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVIL--TPTHLAIIMEYASGG-ELYERICNAGR----F 113
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
S Q+ G+ + H+ +I H +L N L +K+ FG S +
Sbjct: 114 SEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP---RLKICDFGYSKSSVL 170
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
S+ P++ YI APEVL QE G ADV+S G+ + +L G
Sbjct: 171 HSQ------PKSTVGTPAYI--APEVLLRQEYDGKI--------ADVWSCGVTLYVMLVG 214
Query: 430 KVPFED 435
PFED
Sbjct: 215 AYPFED 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 241 VLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
+ ++F +++ EI M SL HPNI++ F E+ + +LVMEL + + R
Sbjct: 42 IPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGG-ELFERVV 98
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
R S + ++ D++ +A + H + H +L P N S + +K+
Sbjct: 99 HKRVFRESDAARIMKDVLSAVA----YCHKLNVAHRDLKPENFLFLTDSPDS--PLKLID 152
Query: 361 FGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
FGL A+R P + + PY + +P+VL G +C E +S G
Sbjct: 153 FGL------AARFKPGKMMRTKVG-TPY-YVSPQVLEGLYG------PECDE----WSAG 194
Query: 421 MLCFELLTGKVPF 433
++ + LL G PF
Sbjct: 195 VMMYVLLCGYPPF 207
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 176
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 177 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 224
Query: 430 KVPF 433
+ F
Sbjct: 225 RTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 128
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 129 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 170
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 171 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 218
Query: 430 KVPF 433
+ F
Sbjct: 219 RTLF 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 126
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 127 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 168
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 169 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 216
Query: 430 KVPF 433
+ F
Sbjct: 217 RTLF 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 139
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 140 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 181
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 182 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 229
Query: 430 KVPF 433
+ F
Sbjct: 230 RTLF 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFGSRRR 306
E + E+S + + H N++ + E + + L++EL+S +L ++ +E+
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
SF + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 118 TSF--------IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-IPHIKLIDFGL--- 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A I+ PE +A + + +AD++S G++ + L
Sbjct: 166 ----------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 136
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 137 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 178
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 179 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 226
Query: 430 KVPF 433
+ F
Sbjct: 227 RTLF 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 173
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 174 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 221
Query: 430 KVPF 433
+ F
Sbjct: 222 RTLF 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 173
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 174 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 221
Query: 430 KVPF 433
+ F
Sbjct: 222 RTLF 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 167
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 168 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 215
Query: 430 KVPF 433
+ F
Sbjct: 216 RTLF 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 134
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 135 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 176
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 177 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 224
Query: 430 KVPF 433
+ F
Sbjct: 225 RTLF 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFGSRRR 306
E + E+S + + H N++ + E + + L++EL+S +L ++ +E+
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
SF + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 118 TSF--------IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-IPHIKLIDFGL--- 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A I+ PE +A + + +AD++S G++ + L
Sbjct: 166 ----------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 184 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 231
Query: 430 KVPF 433
+ F
Sbjct: 232 RTLF 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 184 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 231
Query: 430 KVPF 433
+ F
Sbjct: 232 RTLF 235
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 127
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 128 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 169
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 170 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 217
Query: 430 KVPF 433
+ F
Sbjct: 218 RTLF 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 167
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 168 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 215
Query: 430 KVPF 433
+ F
Sbjct: 216 RTLF 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 141
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 142 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 183
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 184 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 231
Query: 430 KVPF 433
+ F
Sbjct: 232 RTLF 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 140
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 141 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 182
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 183 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 230
Query: 430 KVPF 433
+ F
Sbjct: 231 RTLF 234
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 241 VLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
+ ++F +++ EI M SL HPNI++ F E+ + +LVMEL + + R
Sbjct: 59 IPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF--EDNTDIYLVMELCTGG-ELFERVV 115
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
R S + ++ D++ +A + H + H +L P N S + +K+
Sbjct: 116 HKRVFRESDAARIMKDVLSAVA----YCHKLNVAHRDLKPENFLFLTDSPDS--PLKLID 169
Query: 361 FGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFG 420
FGL A+R P + + PY + +P+VL G +C E +S G
Sbjct: 170 FGL------AARFKPGKMMRTKVG-TPY-YVSPQVLEGLYG------PECDE----WSAG 211
Query: 421 MLCFELLTGKVPF 433
++ + LL G PF
Sbjct: 212 VMMYVLLCGYPPF 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 126
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 127 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 168
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 169 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 216
Query: 430 KVPF 433
+ F
Sbjct: 217 RTLF 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 131
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 132 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 173
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 174 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 221
Query: 430 KVPF 433
+ F
Sbjct: 222 RTLF 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 177
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 178 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 225
Query: 430 KVPF 433
+ F
Sbjct: 226 RTLF 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 255 EISTMLSLSHPNIV---QYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
EI +L H N++ L E ++ ++V +LM DL + + S
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDL-------YKLLKSQQLSN 143
Query: 312 PVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
+ + QI RG++++H+ + H +L PSN+ + +K+ FGL+
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTC-----DLKICDFGLARIADPEH 198
Query: 372 RNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
+T + T WY APE++ +G ++ D++S G + E+L+ +
Sbjct: 199 DHTGFLTEXVATR-----WYRAPEIMLNSKGY--------TKSIDIWSVGCILAEMLSNR 245
Query: 431 VPFEDGH 437
F H
Sbjct: 246 PIFPGKH 252
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFGSRRR 306
E + E+S + + H N++ + E + + L++EL+S +L ++ +E+
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
SF + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 118 TSF--------IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-IPHIKLIDFGL--- 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A I+ PE +A + + +AD++S G++ + L
Sbjct: 166 ----------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 148
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 149 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 190
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 191 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 430 KVPF 433
+ F
Sbjct: 239 RTLF 242
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 152
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 153 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 194
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 195 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 430 KVPF 433
+ F
Sbjct: 243 RTLF 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 177
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 178 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 225
Query: 430 KVPF 433
+ F
Sbjct: 226 RTLF 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFGSRRR 306
E + E+S + + H N++ + E + + L++EL+S +L ++ +E+
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
SF + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 118 TSF--------IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-IPHIKLIDFGL--- 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A I+ PE +A + + +AD++S G++ + L
Sbjct: 166 ----------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 191
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 192 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 430 KVPF 433
+ F
Sbjct: 240 RTLF 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 135
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 136 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 177
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 178 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 225
Query: 430 KVPF 433
+ F
Sbjct: 226 RTLF 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 148
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 149 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 190
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 191 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 430 KVPF 433
+ F
Sbjct: 239 RTLF 242
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 53/250 (21%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR----- 304
E++ EI SL HPNIV++ KE L L+ M G
Sbjct: 60 ENVKREIINHRSLRHPNIVRF---------KEVILT----PTHLAIVMEYASGGELFERI 106
Query: 305 -RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
FS Q+ G+ + HA ++ H +L N L +K+ FG
Sbjct: 107 CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP---RLKICAFGY 163
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S + S+ P++ YI APEVL ++E G ADV+S G+
Sbjct: 164 SKSSVLHSQ------PKDTVGTPAYI--APEVLLKKEYDGKV--------ADVWSCGVTL 207
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWH-------TN 474
+ +L G PFED + KN R + P Y V+++ +C H +
Sbjct: 208 YVMLVGAYPFED-----PEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVAD 261
Query: 475 PSQRPSFSSI 484
P++R S I
Sbjct: 262 PAKRISIPEI 271
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 191
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ + ++ D++S G + ELLTG
Sbjct: 192 ARHT----DDEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 430 KVPF 433
+ F
Sbjct: 240 RTLF 243
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 247 GELESLNAEISTMLSLSH----PNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETF 301
GE +LN I MLSL P IV F +K F +++LM+ DL ++ +
Sbjct: 232 GETLALNERI--MLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQ-- 285
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
FS + +I G+E +H + + + +L P+NI L HV++S
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDL 336
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
GL+ S+ P AS + APEVL Q+G S+ AD +S G
Sbjct: 337 GLACD---FSKKKPHASVGTHG------YMAPEVL--QKGVAYDSS------ADWFSLGC 379
Query: 422 LCFELLTGKVPF-----EDGHLQGDKMT 444
+ F+LL G PF +D H + D+MT
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKH-EIDRMT 406
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEIXINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMXGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINAMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEIXINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMXGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 247 GELESLNAEISTMLSLSH----PNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETF 301
GE +LN I MLSL P IV F +K F +++LM+ DL ++ +
Sbjct: 231 GETLALNERI--MLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQ-- 284
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
FS + +I G+E +H + + + +L P+NI L HV++S
Sbjct: 285 ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDL 335
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
GL+ S+ P AS + APEVL Q+G S+ AD +S G
Sbjct: 336 GLACD---FSKKKPHASVGTHG------YMAPEVL--QKGVAYDSS------ADWFSLGC 378
Query: 422 LCFELLTGKVPF-----EDGHLQGDKMT 444
+ F+LL G PF +D H + D+MT
Sbjct: 379 MLFKLLRGHSPFRQHKTKDKH-EIDRMT 405
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYM--RETFGSRRR 306
E + E+S + + H N++ + E + + L++EL+S +L ++ +E+
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
SF + QI G+ +LH +KI H +L P NI L +++ H+K+ FGL
Sbjct: 118 TSF--------IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP-IPHIKLIDFGL--- 165
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
A I+ PE +A + + +AD++S G++ + L
Sbjct: 166 ----------AHEIEDGVEFKNIFGTPEFVAPE----IVNYEPLGLEADMWSIGVITYIL 211
Query: 427 LTGKVPF 433
L+G PF
Sbjct: 212 LSGASPF 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 275 CDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIY 334
C + + VME ++ Y + G F P V +IA G+ FL ++ I
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGII 464
Query: 335 HGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPE 394
+ +L N+ L + H+K++ FG+ + T + YI APE
Sbjct: 465 YRDLKLDNVMLDSEG-----HIKIADFGMCKENIWDGVTT-----KXFCGTPDYI--APE 512
Query: 395 VLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
++A Q S D ++FG+L +E+L G+ PFE
Sbjct: 513 IIAYQPYGKSV---------DWWAFGVLLYEMLAGQAPFE 543
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 247 GELESLNAEISTMLSLSH----PNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETF 301
GE +LN I MLSL P IV F +K F +++LM+ DL ++ +
Sbjct: 232 GETLALNERI--MLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQ-- 285
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
FS + +I G+E +H + + + +L P+NI L HV++S
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDL 336
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
GL+ S+ P AS + APEVL Q+G S+ AD +S G
Sbjct: 337 GLACD---FSKKKPHASVGTHG------YMAPEVL--QKGVAYDSS------ADWFSLGC 379
Query: 422 LCFELLTGKVPF-----EDGHLQGDKMT 444
+ F+LL G PF +D H + D+MT
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKH-EIDRMT 406
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEIXINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMXGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 247 GELESLNAEISTMLSLSH----PNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETF 301
GE +LN I MLSL P IV F +K F +++LM+ DL ++ +
Sbjct: 232 GETLALNERI--MLSLVSTGDCPFIVCMSYAFHTPDKLSF--ILDLMNGGDLHYHLSQ-- 285
Query: 302 GSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGF 361
FS + +I G+E +H + + + +L P+NI L HV++S
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDL 336
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
GL+ S+ P AS + APEVL Q+G S+ AD +S G
Sbjct: 337 GLACD---FSKKKPHASVGTHG------YMAPEVL--QKGVAYDSS------ADWFSLGC 379
Query: 422 LCFELLTGKVPF-----EDGHLQGDKMT 444
+ F+LL G PF +D H + D+MT
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKH-EIDRMT 406
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y +R
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRER---LL 163
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PY+ APE+L +E +E DV+S G++ +L G++P++
Sbjct: 164 NKMXGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 48 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 100
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 101 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 155
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 156 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 202
Query: 430 KVPFE 434
++P++
Sbjct: 203 ELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 251 SLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSF 309
SL EI+ + + H NIV + E ++LVM+L+S E F R +
Sbjct: 52 SLENEIAVLKKIKHENIVTLEDIY--ESTTHYYLVMQLVSGG------ELFDRILERGVY 103
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSN-IYLKARSMEGYFHVKVSGFGLSTART 368
+ ++ Q+ +++LH I H +L P N +YL + E + ++ FGLS
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYL---TPEENSKIMITDFGLSKMEQ 160
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
+T +P + APEVLA++ S+ D +S G++ + LL
Sbjct: 161 NGIMSTACGTPG---------YVAPEVLAQK---------PYSKAVDCWSIGVITYILLC 202
Query: 429 GKVPF 433
G PF
Sbjct: 203 GYPPF 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 275 CDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIY 334
C + + VME ++ Y + G F P V +IA G+ FL ++ I
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGII 143
Query: 335 HGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPP--ASPQNQTAPNPYIWYA 392
+ +L N+ L + H+K++ FG+ + T +P + A
Sbjct: 144 YRDLKLDNVMLDSEG-----HIKIADFGMCKENIWDGVTTKXFCGTPD---------YIA 189
Query: 393 PEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE---DGHLQGDKMTKNIRA 449
PE++A Q + D ++FG+L +E+L G+ PFE + L M N+
Sbjct: 190 PEIIAYQ---------PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA- 239
Query: 450 GERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
+P K V + K +P +R
Sbjct: 240 -----YPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMXGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 44/186 (23%)
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
A G+ FLH H ++ +NI L + F K+S FGL+ A ++ +
Sbjct: 143 ANGINFLHENHHIHRDIKSANILL-----DEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQ-- 439
TA + APE L + + K+D+YSFG++ E++TG +P D H +
Sbjct: 198 TTA-----YMAPEAL----------RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 241
Query: 440 ----------------GDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
D + K + + S S + + ++ +C H ++RP
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDAD-----STSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 484 ICRILR 489
+ ++L+
Sbjct: 297 VQQLLQ 302
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 49 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 101
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 156
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 157 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 203
Query: 430 KVPFE 434
++P++
Sbjct: 204 ELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y +R
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRER---LL 163
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PY+ APE+L +E +E DV+S G++ +L G++P++
Sbjct: 164 NKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y +R
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRER---LL 163
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PY+ APE+L +E +E DV+S G++ +L G++P++
Sbjct: 164 NKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y +R
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRER---LL 164
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PY+ APE+L +E +E DV+S G++ +L G++P++
Sbjct: 165 NKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSF 309
E++ EI L+H N+V++ G E ++ + +L + G
Sbjct: 50 ENIKKEICINKMLNHENVVKFY-GHRREGNIQYLFLEYCSGGELFDRIEPDIG------M 102
Query: 310 SLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY 369
P Q+ G+ +LH I H ++ P N+ L R ++K+S FGL+T Y
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDFGLATVFRY 157
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R PY+ APE+L +E +E DV+S G++ +L G
Sbjct: 158 NNRER---LLNKMCGTLPYV--APELLKRREFH--------AEPVDVWSCGIVLTAMLAG 204
Query: 430 KVPFE 434
++P++
Sbjct: 205 ELPWD 209
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 53/250 (21%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR----- 304
E++ EI SL HPNIV++ KE L L+ M G
Sbjct: 60 ENVKREIINHRSLRHPNIVRF---------KEVILT----PTHLAIVMEYASGGELFERI 106
Query: 305 -RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
FS Q+ G+ + HA ++ H +L N L +K+ FG
Sbjct: 107 CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP---RLKICAFGY 163
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S + S+ P++ YI APEVL ++E G ADV+S G+
Sbjct: 164 SKSSVLHSQ------PKSTVGTPAYI--APEVLLKKEYDGKV--------ADVWSCGVTL 207
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWH-------TN 474
+ +L G PFED + KN R + P Y V+++ +C H +
Sbjct: 208 YVMLVGAYPFED-----PEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVAD 261
Query: 475 PSQRPSFSSI 484
P++R S I
Sbjct: 262 PAKRISIPEI 271
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 178
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 179 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 221
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 222 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 271
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 272 -ITEFM-NHPWIMQSTKVPQTPL 292
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ K++ FG + T + T
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAIL--KLTDFGFAKETTSHNSLTT 222
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 223 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 265
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 266 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 315
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 316 -ITEFM-NHPWIMQSTKVPQTPL 336
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 178
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 179 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 221
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 222 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 271
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 272 -ITEFM-NHPWIMQSTKVPQTPL 292
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEK----KEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F +F+LVM M DL M F +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK----- 127
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ ++ Q+ +G++++H+ + H +L P N+ + +K+ FGL AR
Sbjct: 128 ---IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-----ELKILDFGL--ARHAD 177
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ T + WY APEV+ S ++ D++S G + E+LTG
Sbjct: 178 AEMTGYVVTR---------WYRAPEVI--------LSWMHYNQTVDIWSVGCIMAEMLTG 220
Query: 430 KVPFEDGHLQGDKMTKNIRAGERP 453
K F+ G D++T+ ++ P
Sbjct: 221 KTLFK-GKDYLDQLTQILKVTGVP 243
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 228
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 229 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 271
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 272 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 321
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 322 -ITEFM-NHPWIMQSTKVPQTPL 342
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 177
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 178 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 220
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 221 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 270
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 271 -ITEFM-NHPWIMQSTKVPQTPL 291
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEK----KEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F +F+LVM M DL M F +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK----- 145
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ ++ Q+ +G++++H+ + H +L P N+ + +K+ FGL AR
Sbjct: 146 ---IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-----ELKILDFGL--ARHAD 195
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ T + WY APEV+ S ++ D++S G + E+LTG
Sbjct: 196 AEMTGYVVTR---------WYRAPEVI--------LSWMHYNQTVDIWSVGCIMAEMLTG 238
Query: 430 KVPFEDGHLQGDKMTKNIRAGERP 453
K F+ G D++T+ ++ P
Sbjct: 239 KTLFK-GKDYLDQLTQILKVTGVP 261
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 176
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 177 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 219
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 220 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 269
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 270 -ITEFM-NHPWIMQSTKVPQTPL 290
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTE 176
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 177 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 219
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 220 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 269
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 270 -ITEFM-NHPWIMQSTKVPQTPL 290
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 44/186 (23%)
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
A G+ FLH H ++ +NI L + F K+S FGL+ A ++
Sbjct: 143 ANGINFLHENHHIHRDIKSANILL-----DEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQ-- 439
TA + APE L + + K+D+YSFG++ E++TG +P D H +
Sbjct: 198 TTA-----YMAPEAL----------RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 241
Query: 440 ----------------GDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
D + K + + S S + + ++ +C H ++RP
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDAD-----STSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 484 ICRILR 489
+ ++L+
Sbjct: 297 VQQLLQ 302
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 183
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 184 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 226
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 227 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 276
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 277 -ITEFM-NHPWIMQSTKVPQTPL 297
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ +GL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDYGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 30/191 (15%)
Query: 247 GELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR 306
G+ S+ EI+ + + H NIV + E +LVM+L+S E F
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIY--ESPNHLYLVMQLVSGG------ELFDRIVE 113
Query: 307 NSFSLPVVVDIML-QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
F ++ Q+ + +LH I H +L P N+ ++ E + +S FGLS
Sbjct: 114 KGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEES--KIMISDFGLSK 171
Query: 366 ARTYAS-RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
+T +P + APEVLA++ S+ D +S G++ +
Sbjct: 172 MEGKGDVMSTACGTPG---------YVAPEVLAQK---------PYSKAVDCWSIGVIAY 213
Query: 425 ELLTGKVPFED 435
LL G PF D
Sbjct: 214 ILLCGYPPFYD 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 184
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 185 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 227
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 228 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 277
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 278 -ITEFM-NHPWIMQSTKVPQTPL 298
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 93/245 (37%), Gaps = 37/245 (15%)
Query: 250 ESLNAEISTMLSLSHPNIV-QYLCGFCDEEKKEFFLVMELMS-KDLSCYMRETFGSRRRN 307
ES S M LSH ++V Y C +E LV E + L Y++ + +N
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDEN---ILVQEFVKFGSLDTYLK-----KNKN 108
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYL---KARSMEGYFHVKVSGFGLS 364
++ +++ Q+A M FL + HG + NI L + R +K+S G+S
Sbjct: 109 CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
P + P W PE + + + D +SFG +
Sbjct: 169 IT-------VLPKDILQERIP----WVPPECIENPKNLNLAT--------DKWSFGTTLW 209
Query: 425 ELLTGKVPFEDGHLQGDKMTKNIRAGE-RPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
E+ +G D L + ++ E R P+ L NL C P RPSF +
Sbjct: 210 EICSGG----DKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRA 265
Query: 484 ICRIL 488
I R L
Sbjct: 266 IIRDL 270
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 182
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 183 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 225
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 226 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 275
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 276 -ITEFM-NHPWIMQSTKVPQTPL 296
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 266 NIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGM 325
N++ L F + + EL+S +L E + FSLP+V I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLY----ELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 326 EFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST---ARTYASRNTPPASPQNQ 382
+ LH +I H +L P NI LK + G +KV FG S R Y
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG---IKVIDFGSSCYEHQRVY------------- 257
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDK 442
T + APEV+ ++ D++S G + ELLTG P G +GD+
Sbjct: 258 TXIQSRFYRAPEVIL---------GARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQ 307
Query: 443 MT 444
+
Sbjct: 308 LA 309
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 53/250 (21%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR----- 304
E++ EI SL HPNIV++ KE L L+ M G
Sbjct: 59 ENVKREIINHRSLRHPNIVRF---------KEVILT----PTHLAIVMEYASGGELFERI 105
Query: 305 -RRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
FS Q+ G+ + HA ++ H +L N L +K+ FG
Sbjct: 106 CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP---RLKICDFGY 162
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
S + S+ P++ YI APEVL ++E G ADV+S G+
Sbjct: 163 SKSSVLHSQ------PKSTVGTPAYI--APEVLLKKEYDGKV--------ADVWSCGVTL 206
Query: 424 FELLTGKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWH-------TN 474
+ +L G PFED + KN R + P Y V+++ +C H +
Sbjct: 207 YVMLVGAYPFED-----PEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVAD 260
Query: 475 PSQRPSFSSI 484
P++R S I
Sbjct: 261 PAKRISIPEI 270
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 48/190 (25%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS------ 364
++ QI RG++++H+ I H +L PSN+ + +K+ FGL+
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGLARHTDDE 178
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
A A+R WY APE++ T D++S G +
Sbjct: 179 MAGFVATR-----------------WYRAPEIMLNWMHYNQT--------VDIWSVGCIM 213
Query: 424 FELLTGKVPF 433
ELLTG+ F
Sbjct: 214 AELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 48/190 (25%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS------ 364
++ QI RG++++H+ I H +L PSN+ + +K+ FGL+
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGLARHTDDE 178
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
A A+R WY APE++ T D++S G +
Sbjct: 179 MAGFVATR-----------------WYRAPEIMLNWMHYNQT--------VDIWSVGCIM 213
Query: 424 FELLTGKVPF 433
ELLTG+ F
Sbjct: 214 AELLTGRTLF 223
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 266 NIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGM 325
N++ L F + + EL+S +L E + FSLP+V I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLY----ELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 326 EFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST---ARTYASRNTPPASPQNQ 382
+ LH +I H +L P NI LK + G +KV FG S R Y
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG---IKVIDFGSSCYEHQRVY------------- 257
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDK 442
T + APEV+ ++ D++S G + ELLTG P G +GD+
Sbjct: 258 TXIQSRFYRAPEVIL---------GARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQ 307
Query: 443 MT 444
+
Sbjct: 308 LA 309
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 48/190 (25%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 125
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS------ 364
++ QI RG++++H+ I H +L PSN+ + +K+ FGL+
Sbjct: 126 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGLARHTDDE 174
Query: 365 TARTYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
A A+R WY APE++ T D++S G +
Sbjct: 175 MAGFVATR-----------------WYRAPEIMLNWMHYNQT--------VDIWSVGCIM 209
Query: 424 FELLTGKVPF 433
ELLTG+ F
Sbjct: 210 AELLTGRTLF 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+IM I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 192
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D++S G++ + LL G PF
Sbjct: 193 PCY-------TPY-YVAPEVLGPE---------KYDKSCDMWSLGVIMYILLCGYPPFYS 235
Query: 436 GH--LQGDKMTKNIRAGERPLFP----SGSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
H M IR G+ FP S + + L + T P+QR +
Sbjct: 236 NHGLAISPGMKTRIRMGQYE-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMT--------- 285
Query: 490 YIKKFMANNPDIARSEF--QSPL 510
I +FM N+P I +S Q+PL
Sbjct: 286 -ITEFM-NHPWIMQSTKVPQTPL 306
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 158
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 159 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 200
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 201 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNMT--------VDIWSVGCIMAELLTG 248
Query: 430 KVPF 433
+ F
Sbjct: 249 RTLF 252
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 30/186 (16%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSFS 310
+ EI +L LSHPNI++ F E E LV+EL++ E F + +S
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIF--ETPTEISLVLELVTGG------ELFDRIVEKGYYS 146
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTY- 369
D + QI + +LH I H +L P N+ + + +K++ FGLS +
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA--PLKIADFGLSKIVEHQ 204
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
T +P + APE+L + D++S G++ + LL G
Sbjct: 205 VLMKTVCGTPG---------YCAPEIL---------RGCAYGPEVDMWSVGIITYILLCG 246
Query: 430 KVPFED 435
PF D
Sbjct: 247 FEPFYD 252
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 263 SHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQI 321
HPNI+Q + E FFLV +LM K +L Y+ E + + S IM +
Sbjct: 69 GHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTE------KVTLSEKETRKIMRAL 120
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
+ LH I H +L P NI L + ++K++ FG S P
Sbjct: 121 LEVICALHKLNIVHRDLKPENILL-----DDDMNIKLTDFGFSC-------QLDPGEKLR 168
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGD 441
+ P + APE++ E + + + ++ D++S G++ + LL G PF H +
Sbjct: 169 EVCGTPS-YLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHRKQM 222
Query: 442 KMTKNIRAGERPLFPSGSPKY 462
M + I +G + GSP++
Sbjct: 223 LMLRMIMSGN---YQFGSPEW 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + L H N++ L F E+ E +LV LM DL+ ++ S F
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 127
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ Q+ RG++++H+ I H +L PSN+ + +++ FGL+
Sbjct: 128 ------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC-----ELRILDFGLAR----- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ + T WY APE++ + ++ D++S G + ELL G
Sbjct: 172 ------QADEEMTGYVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 430 KVPF 433
K F
Sbjct: 218 KALF 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 149
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 150 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 191
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T WY APE++ + ++ D++S G + ELLTG
Sbjct: 192 ARHT----DDEMXGXVATRWYRAPEIM--------LNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 430 KVPF 433
+ F
Sbjct: 240 RTLF 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 263 SHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQI 321
HPNI+Q + E FFLV +LM K +L Y+ E + + S IM +
Sbjct: 82 GHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTE------KVTLSEKETRKIMRAL 133
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
+ LH I H +L P NI L + ++K++ FG S P
Sbjct: 134 LEVICALHKLNIVHRDLKPENILL-----DDDMNIKLTDFGFSC-------QLDPGEKLR 181
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGD 441
+ P + APE++ E + + + ++ D++S G++ + LL G PF H +
Sbjct: 182 EVCGTPS-YLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHRKQM 235
Query: 442 KMTKNIRAGERPLFPSGSPKY 462
M + I +G + GSP++
Sbjct: 236 LMLRMIMSGN---YQFGSPEW 253
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRR 306
++E E + +++ P +V+ F D ++VME M D+ ++R R
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLR------RI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IKVADFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 44/186 (23%)
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
A G+ FLH H ++ +NI L + F K+S FGL+ A ++
Sbjct: 137 ANGINFLHENHHIHRDIKSANILL-----DEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQ-- 439
TA + APE L + + K+D+YSFG++ E++TG +P D H +
Sbjct: 192 TTA-----YMAPEAL----------RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 235
Query: 440 ----------------GDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSS 483
D + K + + S S + + ++ +C H ++RP
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDAD-----STSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 484 ICRILR 489
+ ++L+
Sbjct: 291 VQQLLQ 296
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 116
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG++ A +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----VKVMDFGIARAIADSGN 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ QTA + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 172 SV------TQTA---AVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 218
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 219 FT-GDSPDSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRR 306
++E E + +++ P +V+ F D ++VME M D+ ++R R
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLR------RI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IKVADFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
E+S + L H NI++ L+ E DL YM + S+ V+
Sbjct: 83 EVSLLKELQHRNIIELKS--VIHHNHRLHLIFEYAENDLKKYMD------KNPDVSMRVI 134
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ G+ F H+++ H +L P N+ L +K+ FGL+ A R
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T +WY PE+L G+ STS D++S + E+L K P
Sbjct: 195 --------THEIITLWYRPPEILL---GSRHYSTS-----VDIWSIACIWAEMLM-KTPL 237
Query: 434 EDGHLQGDKMTK 445
G + D++ K
Sbjct: 238 FPGDSEIDQLFK 249
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ F Y
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDF-------YL 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 152
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ FGL
Sbjct: 153 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDFGL------- 194
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T WY APE++ T D++S G + ELLTG
Sbjct: 195 ARHT----DDEMXGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 242
Query: 430 KVPF 433
+ F
Sbjct: 243 RTLF 246
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 116
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG++ A +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----VKVMDFGIARAIADSGN 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ QTA + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 172 SV------TQTA---AVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 218
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 219 FT-GDSPVSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 266 NIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGM 325
N++ L F + + EL+S +L E + FSLP+V I + +
Sbjct: 160 NVIHMLENFT--FRNHICMTFELLSMNLY----ELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 326 EFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST---ARTYASRNTPPASPQNQ 382
+ LH +I H +L P NI LK + G +KV FG S R Y +
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSG---IKVIDFGSSCYEHQRVYXXIQS-------- 262
Query: 383 TAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDK 442
+ APEV+ ++ D++S G + ELLTG P G +GD+
Sbjct: 263 -----RFYRAPEVIL---------GARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQ 307
Query: 443 MT 444
+
Sbjct: 308 LA 309
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 263 SHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDIMLQI 321
HPNI+Q + E FFLV +LM K +L Y+ E + + S IM +
Sbjct: 82 GHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTE------KVTLSEKETRKIMRAL 133
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
+ LH I H +L P NI L + ++K++ FG S P
Sbjct: 134 LEVICALHKLNIVHRDLKPENILL-----DDDMNIKLTDFGFSC-------QLDPGEKLR 181
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGD 441
P + APE++ E + + + ++ D++S G++ + LL G PF H +
Sbjct: 182 SVCGTPS-YLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHRKQM 235
Query: 442 KMTKNIRAGERPLFPSGSPKY 462
M + I +G + GSP++
Sbjct: 236 LMLRMIMSGN---YQFGSPEW 253
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 116
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG+ AR A
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNA-----VKVVDFGI--ARAIADS 169
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
N + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 170 G-------NSVXQTAAVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 218
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 219 FT-GDSPVSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
AE + + + HP IV + F + + +L++E +S +M+ R F
Sbjct: 70 AERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGG-ELFMQ----LEREGIFMEDT 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ +I+ + LH + I + +L P NI L + HVK++ FGL +
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----HVKLTDFGLCKESIHDGTV 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T T + APE+L S + D +S G L +++LTG PF
Sbjct: 178 T-------HTFCGTIEYMAPEILMR---------SGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 116
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG++ A +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----VKVMDFGIARAIADSGN 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ QTA + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 172 SV------TQTA---AVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 218
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 219 FT-GDSPVSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 322 ARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQN 381
A G+ FLH H ++ +NI L + F K+S FGL+ A ++ +
Sbjct: 134 ANGINFLHENHHIHRDIKSANILL-----DEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 382 QTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
TA + APE L + + K+D+YSFG++ E++TG +P D H
Sbjct: 189 TTA-----YXAPEAL----------RGEITPKSDIYSFGVVLLEIITG-LPAVDEH 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
E+E E + +++ P +V+ F D ++VME E F RR
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FGL+
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGLAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 53/245 (21%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSR------RRNS 308
EI SL HPNIV++ KE L L+ M G
Sbjct: 65 EIINHRSLRHPNIVRF---------KEVILT----PTHLAIVMEYASGGELFERICNAGR 111
Query: 309 FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
FS Q+ G+ + HA ++ H +L N L +K+ FG S +
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP---RLKICDFGYSKSSV 168
Query: 369 YASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
S+ P++ YI APEVL ++E G ADV+S G+ + +L
Sbjct: 169 LHSQ------PKSTVGTPAYI--APEVLLKKEYDGKV--------ADVWSCGVTLYVMLV 212
Query: 429 GKVPFEDGHLQGDKMTKNIRAGERPLF--PSGSPKYLVNLTKKCWH-------TNPSQRP 479
G PFED + KN R + P Y V+++ +C H +P++R
Sbjct: 213 GAYPFED-----PEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAKRI 266
Query: 480 SFSSI 484
S I
Sbjct: 267 SIPEI 271
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRN 307
++E E + L P + L C + + VME ++ Y + G
Sbjct: 62 DVECTMVEKRVLALLDKPPFLTQLHS-CFQTVDRLYFVMEYVNGGDLMYHIQQVGK---- 116
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F P V +I+ G+ FLH + I + +L N+ L + H+K++ FG+
Sbjct: 117 -FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG-----HIKIADFGMCKEH 170
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
T + YI APE++A Q + D +++G+L +E+L
Sbjct: 171 MMDGVTT-----REFCGTPDYI--APEIIAYQ---------PYGKSVDWWAYGVLLYEML 214
Query: 428 TGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+ PF DG + D++ ++I +P K V++ K +P++R
Sbjct: 215 AGQPPF-DGEDE-DELFQSIME-HNVSYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + L H NIV+ L +KK LV E +DL Y G +V
Sbjct: 51 EICLLKELKHKNIVR-LHDVLHSDKK-LTLVFEFCDQDLKKYFDSCNGD-----LDPEIV 103
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H++ + H +L P N+ + +K++ FGL+ A R
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----ELKLANFGLARAFGIPVR-- 156
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+A +WY P+VL G STS D++S G + EL P
Sbjct: 157 ------CYSAEVVTLWYRPPDVLF---GAKLYSTS-----IDMWSAGCIFAELANAGRPL 202
Query: 434 EDGHLQGDKMTKNIRAGERP 453
G+ D++ + R P
Sbjct: 203 FPGNDVDDQLKRIFRLLGTP 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLXGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 116
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG++ A +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----VKVMDFGIARAIADSGN 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ QTA + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 172 SV------TQTA---AVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 218
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 219 FT-GDSPVSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + L H NIV+ L +KK LV E +DL Y G +V
Sbjct: 51 EICLLKELKHKNIVR-LHDVLHSDKK-LTLVFEFCDQDLKKYFDSCNGD-----LDPEIV 103
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
+ Q+ +G+ F H++ + H +L P N+ + +K++ FGL+ A R
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----ELKLADFGLARAFGIPVR-- 156
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+A +WY P+VL G STS D++S G + EL P
Sbjct: 157 ------CYSAEVVTLWYRPPDVLF---GAKLYSTS-----IDMWSAGCIFAELANAARPL 202
Query: 434 EDGHLQGDKMTKNIRAGERP 453
G+ D++ + R P
Sbjct: 203 FPGNDVDDQLKRIFRLLGTP 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ GL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDAGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 281 EFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ-KIYHGELN 339
+ ++ MELM L + ++ + + ++ I + I + +E LH++ + H ++
Sbjct: 124 DVWICMELMDTSLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVK 181
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
PSN+ + A VK+ FG+S + T A + AP PE+ Q
Sbjct: 182 PSNVLINALG-----QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE---RINPEL--NQ 231
Query: 400 EGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGS 459
+G S K+D++S G+ EL + P++ ++ K + P P+
Sbjct: 232 KGY--------SVKSDIWSLGITMIELAILRFPYDSWGTPFQQL-KQVVEEPSPQLPADK 282
Query: 460 -PKYLVNLTKKCWHTNPSQRPSFSSICR 486
V+ T +C N +RP++ + +
Sbjct: 283 FSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLAGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ GL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDRGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 255 EISTMLSLSHPNIVQ-YLCGFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLP 312
E +L+HP IV Y G + ++VME + +R+ + +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTE--GPMTPK 133
Query: 313 VVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
++++ + + F H I H ++ P+NI + A + VKV FG++ A
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-----VKVMDFGIARAI----- 183
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
A N + + L+ ++ G + ++DVYS G + +E+LTG+ P
Sbjct: 184 ----ADSGNSVTQTAAVIGTAQYLSPEQARGDS----VDARSDVYSLGCVLYEVLTGEPP 235
Query: 433 FEDGHLQGDKMTKNIRAGERPLFPS----GSPKYLVNLTKKCWHTNPSQR 478
F G +++R E P+ PS G L + K NP R
Sbjct: 236 FT-GDSPVSVAYQHVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 255 EISTMLSLSHPNIVQYLCGFCD----EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
E+ + + H N++ L F EE + +LV LM DL+ ++ + F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF- 129
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
++ QI RG++++H+ I H +L PSN+ + +K+ GL
Sbjct: 130 ------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----ELKILDGGL------- 171
Query: 371 SRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+R+T T WY APE++ T D++S G + ELLTG
Sbjct: 172 ARHT----DDEMTGYVATRWYRAPEIMLNWMHYNQT--------VDIWSVGCIMAELLTG 219
Query: 430 KVPF 433
+ F
Sbjct: 220 RTLF 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
V+ ++ QI G+ +LH I H +L P NI L + G +K+ FG+ SR
Sbjct: 133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG--DIKIVDFGM-------SRK 183
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
A + P + APE+L T +T D+++ G++ + LLT PF
Sbjct: 184 IGHACELREIMGTPE-YLAPEILNYDPITTAT---------DMWNIGIIAYMLLTHTSPF 233
Query: 434 --EDGHLQGDKMTK-NIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSIC 485
ED +++ N+ E S + + + NP +RP+ + IC
Sbjct: 234 VGEDNQETYLNISQVNVDYSEETF--SSVSQLATDFIQSLLVKNPEKRPT-AEIC 285
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYL------KARSMEG--------YFHVKVSGF 361
D++LQ+ RG+ ++H+ + H ++ PSNI++ A S EG K+
Sbjct: 115 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 174
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G T +SPQ + + ++ A EVL E KAD+++
Sbjct: 175 G---------HVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALA- 214
Query: 422 LCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
L G P GD+ + IR G P P + L K H +P +RPS
Sbjct: 215 LTVVXAAGAEPLPR---NGDQWHE-IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 270
Query: 482 SSICR 486
++ +
Sbjct: 271 MALVK 275
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP A APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPEA-------------LAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYL------KARSMEG--------YFHVKVSGF 361
D++LQ+ RG+ ++H+ + H ++ PSNI++ A S EG K+
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G T +SPQ + + ++ A EVL E KAD+++
Sbjct: 177 G---------HVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALA- 216
Query: 422 LCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
L G P GD+ + IR G P P + L K H +P +RPS
Sbjct: 217 LTVVCAAGAEPLPR---NGDQWHE-IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 272
Query: 482 SSICR 486
++ +
Sbjct: 273 MALVK 277
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
E+E E + +++ P +V+ F D ++VME E F RR
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FGL+
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IQVTDFGLAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYL------KARSMEG--------YFHVKVSGF 361
D++LQ+ RG+ ++H+ + H ++ PSNI++ A S EG K+
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G T +SPQ + + ++ A EVL E KAD+++
Sbjct: 177 G---------HVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALA- 216
Query: 422 LCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
L G P GD+ + IR G P P + L K H +P +RPS
Sbjct: 217 LTVVCAAGAEPLPR---NGDQWHE-IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 272
Query: 482 SSICR 486
++ +
Sbjct: 273 MALVK 277
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYL------KARSMEG--------YFHVKVSGF 361
D++LQ+ RG+ ++H+ + H ++ PSNI++ A S EG K+
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 178
Query: 362 GLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
G T +SPQ + + ++ A EVL E KAD+++
Sbjct: 179 G---------HVTRISSPQVEEGDSRFL--ANEVLQE--------NYTHLPKADIFALA- 218
Query: 422 LCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
L G P GD+ + IR G P P + L K H +P +RPS
Sbjct: 219 LTVVCAAGAEPLPR---NGDQWHE-IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 274
Query: 482 SSICR 486
++ +
Sbjct: 275 MALVK 279
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS----KDLSCYMRETFGSRRRN 307
L E+ +HPNIV Y F + E ++V M+ KDL C + +
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSFMAYGSAKDLIC-------THFMD 107
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + I+ + + ++++H H + S+I + S++G ++ LS
Sbjct: 108 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMIS 164
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ P+ P W +PEVL +Q G + K+D+YS G+ EL
Sbjct: 165 HGQRQRVVHDFPKYSVKVLP--WLSPEVL-QQNLQGYDA------KSDIYSVGITACELA 215
Query: 428 TGKVPFED 435
G VPF+D
Sbjct: 216 NGHVPFKD 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 252 LNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMS----KDLSCYMRETFGSRRRN 307
L E+ +HPNIV Y F + E ++V M+ KDL C + +
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSFMAYGSAKDLIC-------THFMD 123
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+ + I+ + + ++++H H + S+I + S++G ++ LS
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMIS 180
Query: 368 TYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELL 427
+ P+ P W +PEVL +Q G + K+D+YS G+ EL
Sbjct: 181 HGQRQRVVHDFPKYSVKVLP--WLSPEVL-QQNLQGYDA------KSDIYSVGITACELA 231
Query: 428 TGKVPFED 435
G VPF+D
Sbjct: 232 NGHVPFKD 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------ISKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLPNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IKVADFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADEPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 254 AEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV 313
AE + + + HP IV + F + + +L++E +S +M+ R F
Sbjct: 70 AERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGG-ELFMQ----LEREGIFMEDT 122
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
+ +I+ + LH + I + +L P NI L + HVK++ FGL +
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----HVKLTDFGLCKESIHDGTV 177
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
T + + APE+L S + D +S G L +++LTG PF
Sbjct: 178 THXFCGTIE-------YMAPEILMR---------SGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 32/239 (13%)
Query: 253 NAEISTMLSLSHPNIVQYLCGFCD--EEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M + HPN+V F ++K E FL + L + Y ++ + +
Sbjct: 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP 139
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ ++ M Q+ R + ++H+ I H ++ P N+ L S G+ +
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS------------GVLKLIDFG 187
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
S A N + + APE++ G+T+ + D++S G + EL+ G+
Sbjct: 188 SAKILIAGEPNVSXICSRYYRAPELI-----FGATNYTT---NIDIWSTGCVMAELMQGQ 239
Query: 431 --VPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRP-SFSSICR 486
P E G Q ++ K + R + +P Y+ H P RP FS + R
Sbjct: 240 PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM-------EHKFPQIRPHPFSKVFR 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 255 EISTMLSLSHPNIVQYL-------CGFCDE-----EKKEFFLVMELMSKDLSCYMRETFG 302
EI + L H NIV+ D+ E ++V E M DL+ + + G
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--G 115
Query: 303 SRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFG 362
L M Q+ RG++++H+ + H +L P+N+++ + +K+ FG
Sbjct: 116 PLLEEHARL-----FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV----LKIGDFG 166
Query: 363 LSTARTYASRNTPPASPQNQTAPNPYI-WY-APEVLAEQEGTGSTSTSKCSEKADVYSFG 420
L A P S + + WY +P +L S + ++ D+++ G
Sbjct: 167 L------ARIMDPHYSHKGHLSEGLVTKWYRSPRLL--------LSPNNYTKAIDMWAAG 212
Query: 421 MLCFELLTGKVPFEDGH 437
+ E+LTGK F H
Sbjct: 213 CIFAEMLTGKTLFAGAH 229
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKDGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 52/286 (18%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 156
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAK- 210
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGMLCFE 425
R + T +P+ + APE++ SK KA D ++ G+L +E
Sbjct: 211 RVKGATWTLCGTPE---------YLAPEII----------LSKGYNKAVDWWALGVLIYE 251
Query: 426 LLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ G P F D +Q + + I +G + FPS L +L + + ++R F ++
Sbjct: 252 MAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--FGNL 305
Query: 485 CRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
+ IK K+ A IA + + +EA F+ KF G G
Sbjct: 306 KNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 343
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 241 VLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
+L+HF E I T+ ++ P+ E E +++ ELM DL +
Sbjct: 62 ILKHFKHE------NIITIFNIQRPDSF--------ENFNEVYIIQELMQTDLHRVISTQ 107
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
S + + Q R ++ LH + H +L PSN+ + + +KV
Sbjct: 108 MLSDDHIQY-------FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-----DLKVCD 155
Query: 361 FGLS-TARTYASRNTPPASPQNQTAPNPYI---WY-APEVLAEQEGTGSTSTSKCSEKAD 415
FGL+ A+ N+ P Q+ Y+ WY APEV+ +++K S D
Sbjct: 156 FGLARIIDESAADNSEPTG--QQSGMTEYVATRWYRAPEVM--------LTSAKYSRAMD 205
Query: 416 VYSFGMLCFELLTGKVPF 433
V+S G + EL + F
Sbjct: 206 VWSCGCILAELFLRRPIF 223
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F+ P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 281 EFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ-KIYHGELN 339
+ ++ MELM L + ++ + + ++ I + I + +E LH++ + H ++
Sbjct: 80 DVWICMELMDTSLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVK 137
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
PSN+ + A VK+ FG+S Y + + PY+ APE + +
Sbjct: 138 PSNVLINALG-----QVKMCDFGISG---YLVDDV---AKDIDAGCKPYM--APERINPE 184
Query: 400 EGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGS 459
S K+D++S G+ EL + P++ ++ K + P P+
Sbjct: 185 LNQKGYSV-----KSDIWSLGITMIELAILRFPYDSWGTPFQQL-KQVVEEPSPQLPADK 238
Query: 460 -PKYLVNLTKKCWHTNPSQRPSFSSICR 486
V+ T +C N +RP++ + +
Sbjct: 239 FSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWTLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 260 LSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRET--FGSRRRNSFSLPVVVD 316
L+ +HP + Q C C + F VME ++ DL +++++ F R ++ ++
Sbjct: 79 LARNHPFLTQLFC--CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 317 IMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPP 376
+M FLH + I + +L N+ L H K++ FG+ T
Sbjct: 137 LM--------FLHDKGIIYRDLKLDNVLLDHEG-----HCKLADFGMCKEGICNGVTTAT 183
Query: 377 --ASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+P + APE+L E D ++ G+L +E+L G PFE
Sbjct: 184 FCGTPD---------YIAPEILQEM---------LYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+++ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYQMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 71 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 122
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 123 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDE---QGY--IQVTDFGFAKR 177
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 178 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 214
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 215 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 268
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 269 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 309
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 56/288 (19%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 77 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGG------EMFSHLRRI 128
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 129 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 183
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 184 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 220
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ G PF Q ++ + I +G + FPS L +L + + ++R F
Sbjct: 221 IYEMAAGYPPFFAD--QPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--FG 275
Query: 483 SICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 315
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 241 VLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
+L+HF E I T+ ++ P+ E E +++ ELM DL +
Sbjct: 62 ILKHFKHE------NIITIFNIQRPDSF--------ENFNEVYIIQELMQTDLHRVISTQ 107
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
S + + Q R ++ LH + H +L PSN+ + + +KV
Sbjct: 108 MLSDDHIQY-------FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-----DLKVCD 155
Query: 361 FGLS-TARTYASRNTPPASPQN-QTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVY 417
FGL+ A+ N+ P Q+ T WY APEV+ +++K S DV+
Sbjct: 156 FGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM--------LTSAKYSRAMDVW 207
Query: 418 SFGMLCFELLTGKVPF 433
S G + EL + F
Sbjct: 208 SCGCILAELFLRRPIF 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 26/187 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E M + P +VQ F D+ + ++VME M DL M + F
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDD--RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 181
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
VV ++ +H+ H ++ P N+ L H+K++ FG +
Sbjct: 182 VV-------LALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCM------KM 223
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+ TA + +PEVL Q G G + D +S G+ +E+L G PF
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-----YGRECDWWSVGVFLYEMLVGDTPF 278
Query: 434 EDGHLQG 440
L G
Sbjct: 279 YADSLVG 285
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
RR FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGF 188
Query: 364 S---TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSF 419
+ RT+ TP + APE++ SK KA D ++
Sbjct: 189 AKRVKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWAL 225
Query: 420 GMLCFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+L +E+ G P F D +Q + + I +G + FPS L +L + + ++R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 479 PSFSSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
F ++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 --FGNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKDGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 26/187 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E M + P +VQ F D+ + ++VME M DL M + F
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDD--RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 176
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
VV ++ +H+ H ++ P N+ L H+K++ FG +
Sbjct: 177 VV-------LALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCM------KM 218
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+ TA + +PEVL Q G G + D +S G+ +E+L G PF
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-----YGRECDWWSVGVFLYEMLVGDTPF 273
Query: 434 EDGHLQG 440
L G
Sbjct: 274 YADSLVG 280
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEE-------KKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI + L H N+V L C + K +LV + DL+ +
Sbjct: 67 EIKILQLLKHENVVN-LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---- 121
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F+L + +M + G+ ++H KI H ++ +N+ + + +K++ FGL+ A
Sbjct: 122 -FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-----LKLADFGLARAF 175
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ A +N+ P N+ +WY PE+L + G D++ G + E+
Sbjct: 176 SLA-KNSQPNRYXNRVVT---LWYRPPELLLGERDYGPP--------IDLWGAGCIMAEM 223
Query: 427 LTGKVPFEDGHLQGDKMT 444
T + P G+ + ++
Sbjct: 224 WT-RSPIMQGNTEQHQLA 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
RR FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IKVADFGF 188
Query: 364 S---TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSF 419
+ RT+ TP + APE++ SK KA D ++
Sbjct: 189 AKRVKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWAL 225
Query: 420 GMLCFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+L +E+ G P F D +Q + + I +G + FPS L +L + + ++R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 479 PSFSSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
F ++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 --FGNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKDGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
RR FS P QI E+LH+ + + +L P N+ + +GY +KV+ FG
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGF 188
Query: 364 S---TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSF 419
+ RT+ TP + APE++ SK KA D ++
Sbjct: 189 AKRVKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWAL 225
Query: 420 GMLCFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+L +E+ G P F D +Q + + I +G + FPS L +L + + ++R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 479 PSFSSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
F ++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 --FGNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKDGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 26/187 (13%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELM-SKDLSCYMRETFGSRRRNSFSLPV 313
E M + P +VQ F D+ + ++VME M DL M + F
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDD--RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAE 181
Query: 314 VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRN 373
VV ++ +H+ H ++ P N+ L H+K++ FG +
Sbjct: 182 VV-------LALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCM------KM 223
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+ TA + +PEVL Q G G + D +S G+ +E+L G PF
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-----YGRECDWWSVGVFLYEMLVGDTPF 278
Query: 434 EDGHLQG 440
L G
Sbjct: 279 YADSLVG 285
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS- 308
E L E S L HP+IV+ L + + ++V E M C+ +R ++
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI----VKRADAG 124
Query: 309 --FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
+S V M QI + + H I H ++ P N+ L ++ E VK+ FG++
Sbjct: 125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASK--ENSAPVKLGDFGVAIQ 182
Query: 365 ---TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGM 421
+ R P + APEV+ ++E G + DV+ G+
Sbjct: 183 LGESGLVAGGRVGTPH------------FMAPEVV-KREPYG--------KPVDVWGCGV 221
Query: 422 LCFELLTGKVPF 433
+ F LL+G +PF
Sbjct: 222 ILFILLSGCLPF 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 156
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 211
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 212 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 248
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 249 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 302
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 303 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 343
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++ +F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTK--AF 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 56/288 (19%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 70 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 121
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 122 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 176
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 177 VKGRTWTLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 213
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ G PF Q ++ + I +G + FPS L +L + + ++R F
Sbjct: 214 IYEMAAGYPPFFAD--QPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--FG 268
Query: 483 SICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 269 NLKDGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 308
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEE-------KKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI + L H N+V L C + K +LV + DL+ +
Sbjct: 67 EIKILQLLKHENVVN-LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----V 120
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F+L + +M + G+ ++H KI H ++ +N+ + + +K++ FGL+ A
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-----LKLADFGLARAF 175
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ A +N+ P N+ +WY PE+L + G D++ G + E+
Sbjct: 176 SLA-KNSQPNRYXNRVVT---LWYRPPELLLGERDYGPP--------IDLWGAGCIMAEM 223
Query: 427 LTGKVPFEDGHLQGDKMT 444
T + P G+ + ++
Sbjct: 224 WT-RSPIMQGNTEQHQLA 240
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 19/122 (15%)
Query: 316 DIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+I I +++LH+ I H ++ P N+ ++ +K++ FG + T + T
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTT 222
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
P PY + APEVL + K + D +S G++ + LL G PF
Sbjct: 223 PCY-------TPY-YVAPEVLGPE---------KYDKSCDXWSLGVIXYILLCGYPPFYS 265
Query: 436 GH 437
H
Sbjct: 266 NH 267
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 79 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 130
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 131 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 185
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 186 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 222
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 223 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 276
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 277 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 317
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEE-------KKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI + L H N+V L C + K +LV + DL+ +
Sbjct: 67 EIKILQLLKHENVVN-LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---- 121
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F+L + +M + G+ ++H KI H ++ +N+ + + +K++ FGL+ A
Sbjct: 122 -FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-----LKLADFGLARAF 175
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ A +N+ P N+ +WY PE+L + G D++ G + E+
Sbjct: 176 SLA-KNSQPNRYXNRVVT---LWYRPPELLLGERDYGPP--------IDLWGAGCIMAEM 223
Query: 427 LTGKVPFEDGHLQGDKMT 444
T + P G+ + ++
Sbjct: 224 WT-RSPIMQGNTEQHQLA 240
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 30/160 (18%)
Query: 278 EKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGE 337
E K ++V++LM DL + + +L V + Q+ RG++++H+ ++ H +
Sbjct: 130 EFKSVYVVLDLMESDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYI---WY-AP 393
L PSN+ + +K+ FG++ T PA ++Q Y+ WY AP
Sbjct: 184 LKPSNLLVNENC-----ELKIGDFGMARGLC-----TSPA--EHQYFMTEYVATRWYRAP 231
Query: 394 EVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
E++ S + ++ D++S G + E+L + F
Sbjct: 232 ELM--------LSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEE-------KKEFFLVMELMSKDLSCYMRETFGSRRRN 307
EI + L H N+V L C + K +LV + DL+ +
Sbjct: 66 EIKILQLLKHENVVN-LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---- 120
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
F+L + +M + G+ ++H KI H ++ +N+ + + +K++ FGL+ A
Sbjct: 121 -FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV-----LKLADFGLARAF 174
Query: 368 TYASRNTPPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ A +N+ P N+ +WY PE+L + G D++ G + E+
Sbjct: 175 SLA-KNSQPNRYXNRVVT---LWYRPPELLLGERDYGPP--------IDLWGAGCIMAEM 222
Query: 427 LTGKVPFEDGHLQGDKMT 444
T + P G+ + ++
Sbjct: 223 WT-RSPIMQGNTEQHQLA 239
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRR 306
+ + L E L HPNIV+ +E+ +LV +L++ E F R
Sbjct: 47 DFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGG------ELFEDIVAR 98
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S + QI + + H+ I H L P N+ L +++ VK++ FGL+
Sbjct: 99 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA--VKLADFGLAI- 155
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
N A P + +PEVL + S+ D+++ G++ + L
Sbjct: 156 ----EVNDSEAWHGFAGTPG---YLSPEVLKK---------DPYSKPVDIWACGVILYIL 199
Query: 427 LTGKVPF--EDGHLQGDKMTKNIRAG 450
L G PF ED H ++ I+AG
Sbjct: 200 LVGYPPFWDEDQH----RLYAQIKAG 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRR 306
+ + L E L HPNIV+ +E+ +LV +L++ E F R
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGG------ELFEDIVAR 99
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S + QI + + H+ I H L P N+ L +++ VK++ FGL+
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA--VKLADFGLAI- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
N A P + +PEVL + S+ D+++ G++ + L
Sbjct: 157 ----EVNDSEAWHGFAGTPG---YLSPEVLKK---------DPYSKPVDIWACGVILYIL 200
Query: 427 LTGKVPF--EDGHLQGDKMTKNIRAG 450
L G PF ED H ++ I+AG
Sbjct: 201 LVGYPPFWDEDQH----RLYAQIKAG 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRR 306
+ + L E L HPNIV+ +E+ +LV +L++ E F R
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGG------ELFEDIVAR 99
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S + QI + + H+ I H L P N+ L +++ VK++ FGL+
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA--AVKLADFGLAI- 156
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
N A P + +PEVL + S+ D+++ G++ + L
Sbjct: 157 ----EVNDSEAWHGFAGTPG---YLSPEVLKK---------DPYSKPVDIWACGVILYIL 200
Query: 427 LTGKVPF--EDGHLQGDKMTKNIRAG 450
L G PF ED H ++ I+AG
Sbjct: 201 LVGYPPFWDEDQH----RLYAQIKAG 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS- 308
E L E S L HP+IV+ L + + ++V E M C+ +R ++
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI----VKRADAG 124
Query: 309 --FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S V M QI + + H I H ++ P + L ++ E VK+ GFG++
Sbjct: 125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK--ENSAPVKLGGFGVAIQ 182
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ + P+ + APEV+ ++E G + DV+ G++ F L
Sbjct: 183 LGESGL----VAGGRVGTPH---FMAPEVV-KREPYG--------KPVDVWGCGVILFIL 226
Query: 427 LTGKVPF 433
L+G +PF
Sbjct: 227 LSGCLPF 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 278 EKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGE 337
E K ++V++LM DL + + +L V + Q+ RG++++H+ ++ H +
Sbjct: 131 EFKSVYVVLDLMESDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYI---WY-AP 393
L PSN+ + +K+ FG++ T PA ++Q Y+ WY AP
Sbjct: 185 LKPSNLLVNENC-----ELKIGDFGMARGLC-----TSPA--EHQYFMTEYVATRWYRAP 232
Query: 394 EVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLT 428
E++ S + ++ D++S G + E+L
Sbjct: 233 ELM--------LSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 250 ESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNS- 308
E L E S L HP+IV+ L + + ++V E M C+ +R ++
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFEFMDGADLCFEI----VKRADAG 126
Query: 309 --FSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S V M QI + + H I H ++ P + L ++ E VK+ GFG++
Sbjct: 127 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK--ENSAPVKLGGFGVAIQ 184
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P+ + APEV+ ++E G + DV+ G++ F L
Sbjct: 185 LGESGLVA------GGRVGTPH-FMAPEVV-KREPYG--------KPVDVWGCGVILFIL 228
Query: 427 LTGKVPF 433
L+G +PF
Sbjct: 229 LSGCLPF 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 105 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 156
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 157 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 211
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 212 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 248
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 249 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 302
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 303 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 343
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME ++ E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + AP ++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPAII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY +KV+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I G+E LH ++I + +L P NI L + + H+++S GL+ P
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL-----DDHGHIRISDLGLAV-----------HVP 337
Query: 380 QNQTAP---NPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+ QT + APEV+ + T S D ++ G L +E++ G+ PF+
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFS---------PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I G+E LH ++I + +L P NI L + + H+++S GL+ P
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL-----DDHGHIRISDLGLAV-----------HVP 337
Query: 380 QNQTAP---NPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+ QT + APEV+ + T S D ++ G L +E++ G+ PF+
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFS---------PDWWALGCLLYEMIAGQSPFQ 386
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 169
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 170 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 220
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 221 -PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 83 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 134
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 135 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 183
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 243
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSI 484
K L ++ K C +P QR S +
Sbjct: 244 IPEKDLQDVLKCCLKRDPKQRISIPEL 270
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 87 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 138
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 139 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 187
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 247
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSI 484
K L ++ K C +P QR S +
Sbjct: 248 IPEKDLQDVLKCCLKRDPKQRISIPEL 274
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 74 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 133
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 134 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 187
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 188 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 229
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 230 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 255
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 135
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 190
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 191 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 227
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 228 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 281
Query: 482 SSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 322
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
RR F P QI E+LH+ + + +L P N+ + +GY +KV+ FG
Sbjct: 134 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY--IKVTDFGF 188
Query: 364 S---TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSF 419
+ RT+ TP + APE++ SK KA D ++
Sbjct: 189 AKRVKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWAL 225
Query: 420 GMLCFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+L +E+ G P F D +Q + + I +G + FPS L +L + + ++R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 479 PSFSSICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
F ++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 282 --FGNLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 56/288 (19%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 77 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGG------EMFSHLRRI 128
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
F P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 129 GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 183
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 184 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 220
Query: 423 CFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
+E+ G PF Q ++ + I +G + FPS L +L + + ++R F
Sbjct: 221 IYEMAAGYPPFFAD--QPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--FG 275
Query: 483 SICRILRYIK--KFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + IK K+ A IA + + +EA F+ KF G G
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 315
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 241 VLRHFYGELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRET 300
+L+HF E I T+ ++ P+ E E +++ ELM DL +
Sbjct: 62 ILKHFKHE------NIITIFNIQRPDSF--------ENFNEVYIIQELMQTDLHRVISTQ 107
Query: 301 FGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSG 360
S + + Q R ++ LH + H +L PSN+ + + +KV
Sbjct: 108 MLSDDHIQY-------FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-----DLKVCD 155
Query: 361 FGLS-TARTYASRNTPPASPQNQTAPNPYI-WY-APEVLAEQEGTGSTSTSKCSEKADVY 417
FGL+ A+ N+ P Q+ WY APEV+ +++K S DV+
Sbjct: 156 FGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM--------LTSAKYSRAMDVW 207
Query: 418 SFGMLCFELLTGKVPF 433
S G + EL + F
Sbjct: 208 SCGCILAELFLRRPIF 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRR 306
+ + L E L HPNIV+ +E+ +LV +L++ E F R
Sbjct: 71 DFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGG------ELFEDIVAR 122
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
+S + QI + + H+ I H L P N+ L +++ VK++ FGL+
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA--VKLADFGLAI- 179
Query: 367 RTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
N A P + +PEVL + S+ D+++ G++ + L
Sbjct: 180 ----EVNDSEAWHGFAGTPG---YLSPEVLKK---------DPYSKPVDIWACGVILYIL 223
Query: 427 LTGKVPF--EDGHLQGDKMTKNIRAG 450
L G PF ED H ++ I+AG
Sbjct: 224 LVGYPPFWDEDQH----RLYAQIKAG 245
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 248 ELESLNAEISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRR- 306
++E E + +++ P +V+ F D ++VME + E F RR
Sbjct: 85 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGG------EMFSHLRRI 136
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS-- 364
FS P QI E+LH+ + + +L P N+ + +GY ++V+ FG +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY--IQVTDFGFAKR 191
Query: 365 -TARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKA-DVYSFGML 422
RT+ TP + APE++ SK KA D ++ G+L
Sbjct: 192 VKGRTWXLCGTPE-------------YLAPEII----------LSKGYNKAVDWWALGVL 228
Query: 423 CFELLTGKVP-FEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSF 481
+E+ G P F D +Q + + I +G + FPS L +L + + ++R F
Sbjct: 229 IYEMAAGYPPFFADQPIQ---IYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR--F 282
Query: 482 SSICRILRYI--KKFMANNPDIARSEFQSPLADYCDIEAGFVRKFVGEG 528
++ + I K+ A IA + + +EA F+ KF G G
Sbjct: 283 GNLKNGVNDIXNHKWFATTDWIAIYQRK--------VEAPFIPKFKGPG 323
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 174
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 175 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 216
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 217 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 154
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 155 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 203
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 263
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSI 484
K L ++ K C +P QR S +
Sbjct: 264 IPEKDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 89 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 148
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 149 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 202
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 203 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 244
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 245 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 270
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 182
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 183 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 231
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSI 484
K L ++ K C +P QR S +
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPEL 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 69 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 128
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 129 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 177
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 178 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 228
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 229 -PIFPGDSGVDQLVEIIKVLGTP 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 174
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 175 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 216
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 217 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 80 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 139
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 140 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 188
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 189 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 239
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 240 -PIFPGDSGVDQLVEIIKVLGTP 261
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 62 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 121
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 122 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 170
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 171 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 221
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 222 -PIFPGDSGVDQLVEIIKVLGTP 243
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 169
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 170 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 220
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 221 -PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 169
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 170 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 220
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 221 -PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 181
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 182 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 232
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 233 -PIFPGDSGVDQLVEIIKVLGTP 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +A+
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG--SAKQLV 208
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 209 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 250
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 251 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 276
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 65 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 124
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 125 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 173
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 174 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 224
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 225 -PIFPGDSGVDQLVEIIKVLGTP 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 174
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 175 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 216
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 217 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 66 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 125
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 126 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 179
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 180 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 221
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 222 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 247
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 181
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 182 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 232
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 233 -PIFPGDSGVDQLVEIIKVLGTP 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 97 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 156
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 157 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFGSAKQLV-- 210
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 211 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 252
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 253 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 278
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 48/207 (23%)
Query: 317 IMLQIARGMEFLHAQ--------KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
I+L IA G+ LH + I H +L NI +K ++ GL+ +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-----QCCIADLGLAVMHS 164
Query: 369 YASRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
++ Q NP + + APEVL E T ++ D+++FG++ +
Sbjct: 165 QSTN-------QLDVGNNPRVGTKRYMAPEVLDE---TIQVDCFDSYKRVDIWAFGLVLW 214
Query: 425 ELLTGKV----------PFEDGHLQGDKMTKNIRA-----GERPLFPS---GSPKY--LV 464
E+ V PF D + D +++R +RP P+ P L
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDV-VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 273
Query: 465 NLTKKCWHTNPSQRPSFSSICRILRYI 491
L K+CW+ NPS R + I + L I
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 135
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 136 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 184
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 244
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSF 481
K L ++ K C +P QR S
Sbjct: 245 IPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 99 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 158
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +A+
Sbjct: 159 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG--SAKQLV 212
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 213 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 254
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 255 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 280
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 30/190 (15%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVV 314
EI + L HPN+V L F K+ LV E + + E R + +V
Sbjct: 52 EIRMLKQLKHPNLVNLLEVF--RRKRRLHLVFEYCDHTV---LHEL--DRYQRGVPEHLV 104
Query: 315 VDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNT 374
I Q + + F H H ++ P NI + S+ +K+ FG + T
Sbjct: 105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV-----IKLCDFGFARLLT-----G 154
Query: 375 PPASPQNQTAPNPYIWY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
P ++ A WY +PE+L G DV++ G + ELL+G VP
Sbjct: 155 PSDYYDDEVATR---WYRSPELLVGDTQYGPP--------VDVWAIGCVFAELLSG-VPL 202
Query: 434 EDGHLQGDKM 443
G D++
Sbjct: 203 WPGKSDVDQL 212
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 48/207 (23%)
Query: 317 IMLQIARGMEFLHAQ--------KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
I+L IA G+ LH + I H +L NI +K ++ GL+ +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-----QCCIADLGLAVMHS 164
Query: 369 YASRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
++ Q NP + + APEVL E T ++ D+++FG++ +
Sbjct: 165 QSTN-------QLDVGNNPRVGTKRYMAPEVLDE---TIQVDCFDSYKRVDIWAFGLVLW 214
Query: 425 ELLTGKV----------PFEDGHLQGDKMTKNIRA-----GERPLFPS---GSPKY--LV 464
E+ V PF D + D +++R +RP P+ P L
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDV-VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 273
Query: 465 NLTKKCWHTNPSQRPSFSSICRILRYI 491
L K+CW+ NPS R + I + L I
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +A+
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG--SAKQLV 208
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
R P N + + APE++ G+T + DV+S G + ELL G+
Sbjct: 209 -RGEP-----NVSXICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 254
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 255 -PIFPGDSGVDQLVEIIKVLGTP 276
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K E +L + L + Y SR + +
Sbjct: 140 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 199
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +A+
Sbjct: 200 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG--SAKQLV 253
Query: 371 SRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
R P S YI + APE++ G+T + DV+S G + EL
Sbjct: 254 -RGEPNVS---------YICSRYYRAPELIF-----GATDY---TSSIDVWSAGCVLAEL 295
Query: 427 LTGKVPFEDGHLQGDKMTKNIRAGERP 453
L G+ P G D++ + I+ P
Sbjct: 296 LLGQ-PIFPGDSGVDQLVEIIKVLGTP 321
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 48/207 (23%)
Query: 317 IMLQIARGMEFLHAQ--------KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART 368
I+L IA G+ LH + I H +L NI +K ++ GL+ +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-----QCCIADLGLAVMHS 193
Query: 369 YASRNTPPASPQNQTAPNPYI----WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCF 424
++ Q NP + + APEVL E T ++ D+++FG++ +
Sbjct: 194 QSTN-------QLDVGNNPRVGTKRYMAPEVLDE---TIQVDCFDSYKRVDIWAFGLVLW 243
Query: 425 ELLTGKV----------PFEDGHLQGDKMTKNIRA-----GERPLFPS---GSPKY--LV 464
E+ V PF D + D +++R +RP P+ P L
Sbjct: 244 EVARRMVSNGIVEDYKPPFYDV-VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 302
Query: 465 NLTKKCWHTNPSQRPSFSSICRILRYI 491
L K+CW+ NPS R + I + L I
Sbjct: 303 KLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 182
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 183 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGAVNYM--PPEAIKDM 231
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSF 481
K L ++ K C +P QR S
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 182
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ +T +Q Y+ PE + +
Sbjct: 183 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYM--PPEAIKDM 231
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSF 481
K L ++ K C +P QR S
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 273 GFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ 331
G D+ K + F++M+ DL + E R FS V+ + L+I +E++H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDLQ-KIYEANAKR----FSRKTVLQLSLRILDILEYIHEH 171
Query: 332 KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY 391
+ HG++ SN+ L ++ + V + +GL A Y P A +P +
Sbjct: 172 EYVHGDIKASNLLLNYKNPD---QVYLVDYGL--AYRYC-----PEGVHKAYAADPKRCH 221
Query: 392 APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGE 451
+ E + + S + D+ G + LTG +P+ED +L+ K ++ +
Sbjct: 222 DGTI--EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRY 278
Query: 452 RPLFPSGSPKYLVNLTKKCW--HTNPSQRPSFSSICRILRYIKKFMANN 498
R + + +L KC+ P + + ++L Y +K + N
Sbjct: 279 R--------ENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 79/255 (30%)
Query: 255 EISTMLSLSHPNIVQYLCGFC--DEEK-KEFFLVMELMSKDLSCYMRETFGSRRRNSFSL 311
EI+ + L+H ++V+ L D EK E ++V+E+ D + F
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDF------------KKLFRT 149
Query: 312 PV------VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST 365
PV + ++ + G++++H+ I H +L P+N + VKV FGL+
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS-----VKVCDFGLAR 204
Query: 366 ARTYASRNTP--PASPQNQ-----TAPNP------------YIWY-APEVLAEQEGTGST 405
Y P SP+ T P+ WY APE++ QE
Sbjct: 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY--- 261
Query: 406 STSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNI--RAGERPLFPSGSPKYL 463
+E DV+S G + ELL + + +N+ A PLFP S
Sbjct: 262 -----TEAIDVWSIGCIFAELL-------------NMIKENVAYHADRGPLFPGSS---- 299
Query: 464 VNLTKKCWHTNPSQR 478
C+ +P Q+
Sbjct: 300 ------CFPLSPDQK 308
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 273 GFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ 331
G D+ K + F++M+ DL + E R FS V+ + L+I +E++H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDLQK-IYEANAKR----FSRKTVLQLSLRILDILEYIHEH 171
Query: 332 KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY 391
+ HG++ SN+ L ++ + V + +GL A Y P + +P +
Sbjct: 172 EYVHGDIKASNLLLNYKNPD---QVYLVDYGL--AYRYC-----PEGVHKEYKEDPKRCH 221
Query: 392 APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGE 451
+ E + + S + D+ G + LTG +P+ED +L+ K ++ +
Sbjct: 222 DGTI--EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRY 278
Query: 452 RPLFPSGSPKYLVNLTKKCW--HTNPSQRPSFSSICRILRYIKKFMANN 498
R + + +L KC+ P + + ++L Y +K + N
Sbjct: 279 R--------ENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 282 FFLVMELMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELN 339
++VME + DL+ ++++ + R S+ + + +H I H +L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSY--------WKNMLEAVHTIHQHGIVHSDLK 154
Query: 340 PSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQ 399
P+N +L M +K+ FG++ + +Q Y+ PE + +
Sbjct: 155 PAN-FLIVDGM-----LKLIDFGIANQ---MQPDXXXVVKDSQVGTVNYM--PPEAIKDM 203
Query: 400 EGT--GSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS 457
+ S SK S K+DV+S G + + + GK PF+ Q K+ I FP
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 263
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSI 484
K L ++ K C +P QR S +
Sbjct: 264 IPEKDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 273 GFCDEEKKEF-FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ 331
G D+ K + F++M+ DL + E R FS V+ + L+I +E++H
Sbjct: 117 GLHDKNGKSYRFMIMDRFGSDLQK-IYEANAKR----FSRKTVLQLSLRILDILEYIHEH 171
Query: 332 KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWY 391
+ HG++ SN+ L ++ + V + +GL A Y P + +P +
Sbjct: 172 EYVHGDIKASNLLLNYKNPD---QVYLVDYGL--AYRYC-----PEGVHKEYKEDPKRCH 221
Query: 392 APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGE 451
+ E + + S + D+ G + LTG +P+ED +L+ K ++ +
Sbjct: 222 DGTI--EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED-NLKDPKYVRDSKIRY 278
Query: 452 RPLFPSGSPKYLVNLTKKCW--HTNPSQRPSFSSICRILRYIKKFMANN 498
R + + +L KC+ P + + ++L Y +K + N
Sbjct: 279 R--------ENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYEN 319
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 50/230 (21%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSFSLPVVVDIMLQ 320
L HPNIV+ +E +LV +L++ E F R +S + Q
Sbjct: 87 LKHPNIVRLHDSISEEGFH--YLVFDLVTGG------ELFEDIVAREYYSEADASHCIHQ 138
Query: 321 IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART------YASRNT 374
I + +H I H +L P N+ L ++ VK++ FGL+ + T
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAA--VKLADFGLAIEVQGEQQAWFGFAGT 196
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF- 433
P + +PEVL + + D+++ G++ + LL G PF
Sbjct: 197 PG-------------YLSPEVLRK---------DPYGKPVDIWACGVILYILLVGYPPFW 234
Query: 434 -EDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQR 478
ED H K+ + I+AG FPS + NL + NP++R
Sbjct: 235 DEDQH----KLYQQIKAGAYD-FPSPEWDTVTPEAKNLINQMLTINPAKR 279
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 44/226 (19%)
Query: 263 SHPNIVQYLCGFCDEEKKEFFLVME--LMSKDLSCYMRE--TFGSRRRNSFSLPVVVDIM 318
HP +++ L F E ++ F LV+E L ++DL Y+ E G F
Sbjct: 96 GHPGVIRLLDWF--ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCF--------F 145
Query: 319 LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPAS 378
Q+ ++ H++ + H ++ NI + R K+ FG + A + P +
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRG----CAKLIDFG-----SGALLHDEPYT 196
Query: 379 PQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHL 438
+ T ++ PE ++ + +T V+S G+L ++++ G +PFE
Sbjct: 197 DFDGTR----VYSPPEWISRHQYHALPAT--------VWSLGILLYDMVCGDIPFE---- 240
Query: 439 QGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSI 484
+ I E FP+ L ++C PS RPS I
Sbjct: 241 ----RDQEILEAEL-HFPAHVSPDCCALIRRCLAPKPSSRPSLEEI 281
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 259 MLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDI 317
+L+ H + L + E K + LVM +M+ D+ ++ F P +
Sbjct: 238 ILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFY 294
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
QI G+E LH + I + +L P N+ L +V++S GL+ T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----NVRISDLGLAVELKAGQTKT--- 346
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
A P + APE+L +E S D ++ G+ +E++ + PF
Sbjct: 347 ---KGYAGTPG-FMAPELLLGEEYDFSV---------DYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 259 MLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDI 317
+L+ H + L + E K + LVM +M+ D+ ++ F P +
Sbjct: 238 ILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFY 294
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
QI G+E LH + I + +L P N+ L +V++S GL+ T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----NVRISDLGLAVELKAGQTKT--- 346
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
A P + APE+L +E S D ++ G+ +E++ + PF
Sbjct: 347 ---KGYAGTPG-FMAPELLLGEEYDFSV---------DYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 259 MLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDI 317
+L+ H + L + E K + LVM +M+ D+ ++ F P +
Sbjct: 238 ILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFY 294
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
QI G+E LH + I + +L P N+ L +V++S GL+ T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----NVRISDLGLAVELKAGQTKT--- 346
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
A P + APE+L +E S D ++ G+ +E++ + PF
Sbjct: 347 ---KGYAGTPG-FMAPELLLGEEYDFSV---------DYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 259 MLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSK-DLSCYMRETFGSRRRNSFSLPVVVDI 317
+L+ H + L + E K + LVM +M+ D+ ++ F P +
Sbjct: 238 ILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFY 294
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
QI G+E LH + I + +L P N+ L +V++S GL+ T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----NVRISDLGLAVELKAGQTKT--- 346
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
A P + APE+L +E S D ++ G+ +E++ + PF
Sbjct: 347 ---KGYAGTPG-FMAPELLLGEEYDFSV---------DYFALGVTLYEMIAARGPF 389
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 313 VVVDIMLQIARGMEFLHAQ-KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS 371
++ + + + +G+ +L + KI H ++ PSNI + +R +K+ FG+S +
Sbjct: 124 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSM 178
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
N+ + + +PE L +GT S ++D++S G+ E+ G+
Sbjct: 179 ANSFVGTRS---------YMSPERL---QGT------HYSVQSDIWSMGLSLVEMAVGRY 220
Query: 432 PF--EDGHLQGDKMTKNIRAGERPLFPSGSPKY-LVNLTKKCWHTNPSQRPSFSSICRIL 488
P G + ++ I P PSG + KC NP++R + +
Sbjct: 221 PIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM-VH 279
Query: 489 RYIKKFMANNPDIA 502
+IK+ A D A
Sbjct: 280 AFIKRSDAEEVDFA 293
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 274 FCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKI 333
+C E +VMEL+ L F SR+ FSL V+ + Q+ +E++H++
Sbjct: 72 WCGAEGDYNVMVMELLGPSLEDLF--NFCSRK---FSLKTVLLLADQMISRIEYIHSKNF 126
Query: 334 YHGELNPSNIYLKARSMEGYFHVKVSGFGLST----ARTYASRNTPPASPQNQTAPNPYI 389
H ++ P N +L +G V + FGL+ ART+ ++ P +N T Y
Sbjct: 127 IHRDVKPDN-FLMGLGKKGNL-VYIIDFGLAKKYRDARTH--QHIPYRENKNLTGTARYA 182
Query: 390 WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+ EQ S + D+ S G + G +P+ QG K A
Sbjct: 183 SINTHLGIEQ-----------SRRDDLESLGYVLMYFNLGSLPW-----QGLKA-----A 221
Query: 450 GERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRY 490
+R + S K + + PS+ ++ + CR LR+
Sbjct: 222 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 253 NAEISTMLSLSHPNIVQ--YLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFS 310
N E+ M L H NIV+ Y E+K +L + L + Y SR + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 311 LPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYA 370
+ V M Q+ R + ++H+ I H ++ P N+ L + +K+ FG +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV----LKLCDFG-------S 169
Query: 371 SRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGK 430
++ P + Y + APE++ G+T + DV+S G + ELL G+
Sbjct: 170 AKQLVRGEPNVSXICSRY-YRAPELIF-----GATDY---TSSIDVWSAGCVLAELLLGQ 220
Query: 431 VPFEDGHLQGDKMTKNIRAGERP 453
P G D++ + I+ P
Sbjct: 221 -PIFPGDSGVDQLVEIIKVLGTP 242
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 274 FCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKI 333
+C E +VMEL+ L F SR+ FSL V+ + Q+ +E++H++
Sbjct: 70 WCGAEGDYNVMVMELLGPSLEDLF--NFCSRK---FSLKTVLLLADQMISRIEYIHSKNF 124
Query: 334 YHGELNPSNIYLKARSMEGYFHVKVSGFGLST----ARTYASRNTPPASPQNQTAPNPYI 389
H ++ P N +L +G V + FGL+ ART+ ++ P +N T Y
Sbjct: 125 IHRDVKPDN-FLMGLGKKGNL-VYIIDFGLAKKYRDARTH--QHIPYRENKNLTGTARYA 180
Query: 390 WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+ EQ S + D+ S G + G +P+ QG K A
Sbjct: 181 SINTHLGIEQ-----------SRRDDLESLGYVLMYFNLGSLPW-----QGLKA-----A 219
Query: 450 GERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRY 490
+R + S K + + PS+ ++ + CR LR+
Sbjct: 220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF 260
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 274 FCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKI 333
+C E +VMEL+ L F SR+ FSL V+ + Q+ +E++H++
Sbjct: 72 WCGAEGDYNVMVMELLGPSLEDLF--NFCSRK---FSLKTVLLLADQMISRIEYIHSKNF 126
Query: 334 YHGELNPSNIYLKARSMEGYFHVKVSGFGLST----ARTYASRNTPPASPQNQTAPNPYI 389
H ++ P N +L +G V + FGL+ ART+ ++ P +N T Y
Sbjct: 127 IHRDVKPDN-FLMGLGKKGNL-VYIIDFGLAKKYRDARTH--QHIPYRENKNLTGTARYA 182
Query: 390 WYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRA 449
+ EQ S + D+ S G + G +P+ QG K A
Sbjct: 183 SINTHLGIEQ-----------SRRDDLESLGYVLMYFNLGSLPW-----QGLKA-----A 221
Query: 450 GERPLFPSGSPKYLVNLTKKCWHTNPSQRPSFSSICRILRY 490
+R + S K + + PS+ ++ + CR LR+
Sbjct: 222 TKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRF 262
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I +E LH I + ++ NI L + HV ++ FGLS + + + T A
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNG-----HVVLTDFGLS--KEFVADETERAYD 219
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQ 439
T + AP+++ G + K D +S G+L +ELLTG PF +
Sbjct: 220 FCGTIE----YMAPDIVR----GGDSGHDKA---VDWWSLGVLMYELLTGASPFT---VD 265
Query: 440 GDK-----MTKNIRAGERPLFPSGSPKYLVNLTKKCWHTNPSQR 478
G+K +++ I E P +P +L ++ +P +R
Sbjct: 266 GEKNSQAEISRRILKSEPP-YPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 317 IMLQIARGMEFLHAQ-KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLS------TARTY 369
I + I + +E LH++ + H ++ PSN+ + A VK FG+S A+
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----QVKXCDFGISGYLVDDVAKDI 195
Query: 370 ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTG 429
+ P +P+ PE+ Q+G S K+D++S G+ EL
Sbjct: 196 DAGCKPYXAPER---------INPEL--NQKGY--------SVKSDIWSLGITXIELAIL 236
Query: 430 KVPFEDGHLQGDKMTKNIRAGERPLFPSGS-PKYLVNLTKKCWHTNPSQRPSFSSI 484
+ P++ ++ K + P P+ V+ T +C N +RP++ +
Sbjct: 237 RFPYDSWGTPFQQL-KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 50/234 (21%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSFSLPVVVDIMLQ 320
L HPNIV+ +E +LV +L++ E F R +S + Q
Sbjct: 60 LKHPNIVRLHDSISEE--GFHYLVFDLVTGG------ELFEDIVAREYYSEADASHCIQQ 111
Query: 321 IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTART------YASRNT 374
I + H I H +L P N+ L ++S VK++ FGL+ + T
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAA--VKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF- 433
P + +PEVL + + D+++ G++ + LL G PF
Sbjct: 170 PG-------------YLSPEVLRK---------DPYGKPVDMWACGVILYILLVGYPPFW 207
Query: 434 -EDGHLQGDKMTKNIRAGE----RPLFPSGSPKYLVNLTKKCWHTNPSQRPSFS 482
ED H ++ + I+AG P + + +P+ +L K NP++R + S
Sbjct: 208 DEDQH----RLYQQIKAGAYDFPSPEWDTVTPE-AKDLINKMLTINPAKRITAS 256
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 50/203 (24%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFS---LPVVVDIMLQIARGMEFLHAQKIYHGELNP 340
+ EL+ K+ TF + N+F LP V + Q+ + FLH ++ H +L P
Sbjct: 108 IAFELLGKN-------TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKP 160
Query: 341 SNIYLKARSMEGYFH--------------VKVSGFGLSTARTYASRNTPPASPQNQTAPN 386
NI E ++ ++V+ FG +T + T A+
Sbjct: 161 ENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF-DHEHHTTIVATRH------ 213
Query: 387 PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKN 446
+ PEV+ E ++ DV+S G + FE G F Q + ++
Sbjct: 214 ---YRPPEVILE---------LGWAQPCDVWSIGCILFEYYRGFTLF-----QTHENREH 256
Query: 447 IRAGERPLFPSGSPKYLVNLTKK 469
+ E+ L P P ++++ T+K
Sbjct: 257 LVMMEKILGP--IPSHMIHRTRK 277
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 50/203 (24%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFS---LPVVVDIMLQIARGMEFLHAQKIYHGELNP 340
+ EL+ K+ TF + N+F LP V + Q+ + FLH ++ H +L P
Sbjct: 99 IAFELLGKN-------TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKP 151
Query: 341 SNIYLKARSMEGYFH--------------VKVSGFGLSTARTYASRNTPPASPQNQTAPN 386
NI E ++ ++V+ FG +T + T A+
Sbjct: 152 ENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF-DHEHHTTIVATRH------ 204
Query: 387 PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKN 446
+ PEV+ E ++ DV+S G + FE G F Q + ++
Sbjct: 205 ---YRPPEVILE---------LGWAQPCDVWSIGCILFEYYRGFTLF-----QTHENREH 247
Query: 447 IRAGERPLFPSGSPKYLVNLTKK 469
+ E+ L P P ++++ T+K
Sbjct: 248 LVMMEKILGP--IPSHMIHRTRK 268
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 262 LSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS-RRRNSFSLPVVVDIMLQ 320
L HPNIV+ +E +LV +L++ E F R +S + Q
Sbjct: 60 LKHPNIVRLHDSISEE--GFHYLVFDLVTGG------ELFEDIVAREYYSEADASHCIQQ 111
Query: 321 IARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST------ARTYASRNT 374
I + H I H +L P N+ L ++S VK++ FGL+ + T
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAA--VKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 375 PPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF- 433
P + +PEVL + + D+++ G++ + LL G PF
Sbjct: 170 PG-------------YLSPEVLRK---------DPYGKPVDMWACGVILYILLVGYPPFW 207
Query: 434 -EDGHLQGDKMTKNIRAGERPLFPSGSPKYLV----NLTKKCWHTNPSQRPSFS 482
ED H ++ + I+AG FPS + +L K NP++R + S
Sbjct: 208 DEDQH----RLYQQIKAGAYD-FPSPEWDTVTPEAKDLINKMLTINPAKRITAS 256
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
++ ++ +H H ++ P N+ L H++++ FG + +
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNG-----HIRLADFGSCL------KMNDDGTV 231
Query: 380 QNQTAPNPYIWYAPEVL-AEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHL 438
Q+ A + +PE+L A ++G G K + D +S G+ +E+L G+ PF L
Sbjct: 232 QSSVAVGTPDYISPEILQAMEDGMG-----KYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 439 QGDKMTKNIRAGERPLFPS 457
+ K + ER FPS
Sbjct: 287 V-ETYGKIMNHEERFQFPS 304
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
+ ++ ++ +H H ++ P NI + M G H++++ FG +
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNG--HIRLADFGSCL------KLMEDG 229
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
+ Q+ A + +PE+L EG +C D +S G+ +E+L G+ PF
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC----DWWSLGVCMYEMLYGETPF 281
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 50/203 (24%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFS---LPVVVDIMLQIARGMEFLHAQKIYHGELNP 340
+ EL+ K+ TF + N+F LP V + Q+ + FLH ++ H +L P
Sbjct: 131 IAFELLGKN-------TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKP 183
Query: 341 SNIYLKARSMEGYFH--------------VKVSGFGLSTARTYASRNTPPASPQNQTAPN 386
NI E ++ ++V+ FG S + T A+
Sbjct: 184 ENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG-SATFDHEHHTTIVATRH------ 236
Query: 387 PYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKN 446
+ PEV+ E ++ DV+S G + FE G F Q + ++
Sbjct: 237 ---YRPPEVILEL---------GWAQPCDVWSIGCILFEYYRGFTLF-----QTHENREH 279
Query: 447 IRAGERPLFPSGSPKYLVNLTKK 469
+ E+ L P P ++++ T+K
Sbjct: 280 LVMMEKILGP--IPSHMIHRTRK 300
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
++ ++ +H H ++ P N+ L H++++ FG + +
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNG-----HIRLADFGSCL------KMNDDGTV 247
Query: 380 QNQTAPNPYIWYAPEVL-AEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHL 438
Q+ A + +PE+L A ++G G K + D +S G+ +E+L G+ PF L
Sbjct: 248 QSSVAVGTPDYISPEILQAMEDGMG-----KYGPECDWWSLGVCMYEMLYGETPFYAESL 302
Query: 439 QGDKMTKNIRAGERPLFPS 457
+ K + ER FPS
Sbjct: 303 V-ETYGKIMNHEERFQFPS 320
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNI 343
LVM+L+ L F SR+ SL V+ + Q+ +EF+H++ H ++ P N
Sbjct: 80 LVMDLLGPSLEDLF--NFCSRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 134
Query: 344 YLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTG 403
+ ++ G T ++ P +N T Y + EQ
Sbjct: 135 LMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQ---- 190
Query: 404 STSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPS------ 457
S + D+ S G + L G +P++ G G K K + E+ + S
Sbjct: 191 -------SRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTKKQKYEKISEKKVATSIEALCR 242
Query: 458 GSPKYLVNLTKKCWHTNPSQRPSFSSICRILR 489
G P + C +P +S + R+ R
Sbjct: 243 GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I+ + +LH + I + +L N+ L + EG H+K++ +G+ P
Sbjct: 129 EISLALNYLHERGIIYRDLKLDNVLLDS---EG--HIKLTDYGM------CKEGLRPGDT 177
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+ P + APE+L ++ S D ++ G+L FE++ G+ PF+
Sbjct: 178 TSXFCGTPN-YIAPEILRGEDYGFSV---------DWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 263 SHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIA 322
+HP +V F E + FF++ + DL +M+ R+ +I+
Sbjct: 111 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ------RQRKLPEEHARFYSAEIS 163
Query: 323 RGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL--STARTYASRNTPPASPQ 380
+ +LH + I + +L N+ L + H+K++ +G+ R + +T +P
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEG-----HIKLTDYGMCKEGLRPGDTTSTFCGTPN 218
Query: 381 NQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+ APE+L ++ S D ++ G+L FE++ G+ PF+
Sbjct: 219 ---------YIAPEILRGEDYGFSV---------DWWALGVLMFEMMAGRSPFD 254
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)
Query: 263 SHPNIVQYLCGFCDEEKKE----FFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIM 318
SH + Q+ C E+ E +L EL L + E +G+ + + D +
Sbjct: 109 SHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHC-EAWGASLPEAQVWGYLRDTL 167
Query: 319 LQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPAS 378
L +A LH+Q + H ++ P+NI+L R K+ FGL T A
Sbjct: 168 LALAH----LHSQGLVHLDVKPANIFLGPRG-----RCKLGDFGL-----LVELGTAGAG 213
Query: 379 PQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFEL 426
+ P + APE+L GT ADV+S G+ E+
Sbjct: 214 EVQEGDPR---YMAPELLQGSYGT----------AADVFSLGLTILEV 248
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I+ + +LH + I + +L N+ L + EG H+K++ +G+ T
Sbjct: 114 EISLALNYLHERGIIYRDLKLDNVLLDS---EG--HIKLTDYGMCKEGLRPGDTTSXFC- 167
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PN + APE+L ++ S D ++ G+L FE++ G+ PF+
Sbjct: 168 ---GTPN---YIAPEILRGEDYGFSV---------DWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
+I+ + +LH + I + +L N+ L + EG H+K++ +G+ T
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLLDS---EG--HIKLTDYGMCKEGLRPGDTTSXFC- 171
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
PN + APE+L ++ S D ++ G+L FE++ G+ PF+
Sbjct: 172 ---GTPN---YIAPEILRGEDYGFSV---------DWWALGVLMFEMMAGRSPFD 211
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 39/151 (25%)
Query: 307 NSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTA 366
NS S V + ML + + ++ +H I H ++ PSN +L R ++ Y V FGL+
Sbjct: 112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSN-FLYNRRLKKYALVD---FGLAQG 167
Query: 367 -------------------RTYASRNTPPASPQNQTAPNPYI--WYAPEVLAEQEGTGST 405
R ++ + S + Q AP + APEVL
Sbjct: 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL--------- 218
Query: 406 STSKCSEKA---DVYSFGMLCFELLTGKVPF 433
+KC + D++S G++ LL+G+ PF
Sbjct: 219 --TKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 304 RRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL 363
RR+ + P V I+ QI ++ HA H ++ P NI + A + FG+
Sbjct: 126 RRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF-----AYLVDFGI 180
Query: 364 STARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
++A T Q + APE +E S + +AD+Y+ +
Sbjct: 181 ASATTDEKLT------QLGNTVGTLYYXAPERFSE---------SHATYRADIYALTCVL 225
Query: 424 FELLTGKVPFEDGHLQGDKMT 444
+E LTG P+ QGD+++
Sbjct: 226 YECLTGSPPY-----QGDQLS 241
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 37/122 (30%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGL--------STARTYAS 371
+IA + +LH+ I + +L P NI L ++ H+ ++ FGL ST T+
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQG-----HIVLTDFGLCKENIEHNSTTSTFC- 200
Query: 372 RNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKV 431
+P+ + APEVL +Q D + G + +E+L G
Sbjct: 201 -----GTPE---------YLAPEVLHKQ---------PYDRTVDWWCLGAVLYEMLYGLP 237
Query: 432 PF 433
PF
Sbjct: 238 PF 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 41/171 (23%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLST------ARTYASRN 373
QI + H + H +L P N+ L ++ VK++ FGL+ +
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAA--VKLADFGLAIEVQGDQQAWFGFAG 168
Query: 374 TPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
TP + +PEVL +E G + D+++ G++ + LL G PF
Sbjct: 169 TPG-------------YLSPEVL-RKEAYG--------KPVDIWACGVILYILLVGYPPF 206
Query: 434 --EDGHLQGDKMTKNIRAGE----RPLFPSGSPKYLVNLTKKCWHTNPSQR 478
ED H K+ + I+AG P + + +P+ NL + NP++R
Sbjct: 207 WDEDQH----KLYQQIKAGAYDFPSPEWDTVTPE-AKNLINQMLTINPAKR 252
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ-KIYHGELNPSN 342
+V E++ ++L +++ L V I Q+ G++++H + I H ++ P N
Sbjct: 107 MVFEVLGENLLALIKKY----EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN 162
Query: 343 IYLK-ARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEG 401
+ ++ S E +K++ G A Y T S Q + +P + +L G
Sbjct: 163 VLMEIVDSPENLIQIKIADLG--NACWYDEHYT--NSIQTREYRSPEV-----LLGAPWG 213
Query: 402 TGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE--DGH 437
G AD++S L FEL+TG FE +GH
Sbjct: 214 CG----------ADIWSTACLIFELITGDFLFEPDEGH 241
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 283 FLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSN 342
F+VME + DL S + +F V+ + +++ +E++H + HG++ +N
Sbjct: 128 FMVMERLGIDLQKI------SGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAAN 181
Query: 343 IYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGT 402
+ L ++ + V ++ +GLS P Q NP + + E
Sbjct: 182 LLLGYKNPD---QVYLADYGLSYRYC-------PNGNHKQYQENPRKGHNGTI--EFTSL 229
Query: 403 GSTSTSKCSEKADVYSFGMLCFELLTGKVPFE 434
+ S ++DV G L GK+P+E
Sbjct: 230 DAHKGVALSRRSDVEILGYCMLRWLCGKLPWE 261
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 284 LVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ-KIYHGELNPSN 342
+V E++ ++L +++ L V I Q+ G++++H + I H ++ P N
Sbjct: 107 MVFEVLGENLLALIKKY----EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN 162
Query: 343 IYLK-ARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEG 401
+ ++ S E +K++ G A Y T S Q + +P + +L G
Sbjct: 163 VLMEIVDSPENLIQIKIADLG--NACWYDEHYT--NSIQTREYRSPEV-----LLGAPWG 213
Query: 402 TGSTSTSKCSEKADVYSFGMLCFELLTGKVPFE--DGH 437
G AD++S L FEL+TG FE +GH
Sbjct: 214 CG----------ADIWSTACLIFELITGDFLFEPDEGH 241
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 60/244 (24%)
Query: 250 ESLNAEISTM--LSLSHPN----IVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS 303
E+ +EI + L+ + PN VQ L F E +V EL+ +++E
Sbjct: 56 EAARSEIQVLEHLNTTDPNSTFRCVQMLEWF--EHHGHICIVFELLGLSTYDFIKE---- 109
Query: 304 RRRNSFSLPVVVD----IMLQIARGMEFLHAQKIYHGELNPSNI-YLKARSMEGYF---- 354
N F LP +D + QI + + FLH+ K+ H +L P NI ++++ E Y
Sbjct: 110 ---NGF-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165
Query: 355 ---------HVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGST 405
+KV FG +T + T + + APEV+
Sbjct: 166 RDERTLINPDIKVVDFGSATY----------DDEHHSTLVSTRHYRAPEVIL-------- 207
Query: 406 STSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVN 465
S+ DV+S G + E G F +++ ER L P PK+++
Sbjct: 208 -ALGWSQPCDVWSIGCILIEYYLGFTVF-----PTHDSKEHLAMMERILGP--LPKHMIQ 259
Query: 466 LTKK 469
T+K
Sbjct: 260 KTRK 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 317 IMLQIARGMEFLHAQ-KIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTP 375
+ + + +G+ +L + KI H ++ PSNI + +R +K+ FG+S + N+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMANSF 163
Query: 376 PASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFED 435
+ + +PE L +GT S ++D++S G+ E+ G+ P
Sbjct: 164 VGTRS---------YMSPERL---QGT------HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 436 GHLQGD--------KMTKNIRAGERPLFPSGSPKY-LVNLTKKCWHTNPSQRPSFSSICR 486
+ D ++ I P PSG + KC NP++R +
Sbjct: 206 PDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM- 264
Query: 487 ILRYIKKFMANNPDIA 502
+ +IK+ A D A
Sbjct: 265 VHAFIKRSDAEEVDFA 280
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 72/203 (35%), Gaps = 63/203 (31%)
Query: 281 EFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVD------IMLQIARGMEFLHAQKIY 334
E ++V+E+ DL + F P+ + I+ + G F+H I
Sbjct: 104 ELYIVLEIADSDL------------KKLFKTPIFLTEEHIKTILYNLLLGENFIHESGII 151
Query: 335 HGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYAS-----------RNTPPASPQNQT 383
H +L P+N L VKV FGL ART S N P P N+
Sbjct: 152 HRDLKPANCLLNQDC-----SVKVCDFGL--ARTINSEKDTNIVNDLEENEEPG-PHNKN 203
Query: 384 APNPYI------WY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDG 436
WY APE++ QE ++ D++S G + ELL
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQEN--------YTKSIDIWSTGCIFAELLN----MLQS 251
Query: 437 HLQGDKMTKNIRAGERPLFPSGS 459
H+ N PLFP S
Sbjct: 252 HI-------NDPTNRFPLFPGSS 267
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 33/161 (20%)
Query: 281 EFFLVMELMSKDLSCYMRETFGSRRRNS---FSLPVVVDIMLQIARGMEFLHAQK-IYHG 336
E +++ E M D E F +N + V+ I+ + ++H +K I H
Sbjct: 117 EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176
Query: 337 ELNPSNIYLKARSMEGYFHVKVSGFG----LSTARTYASRNTPPASPQNQTAPNPYIWYA 392
++ PSNI + VK+S FG + + SR T P
Sbjct: 177 DVKPSNILMDKNG-----RVKLSDFGESEYMVDKKIKGSRGTYEFMP------------- 218
Query: 393 PEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
PE S +S K D++S G+ + + VPF
Sbjct: 219 PEFF-------SNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 60/244 (24%)
Query: 250 ESLNAEISTM--LSLSHPN----IVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGS 303
E+ +EI + L+ + PN VQ L F E +V EL+ +++E
Sbjct: 56 EAARSEIQVLEHLNTTDPNSTFRCVQMLEWF--EHHGHICIVFELLGLSTYDFIKE---- 109
Query: 304 RRRNSFSLPVVVD----IMLQIARGMEFLHAQKIYHGELNPSNI-YLKARSMEGYF---- 354
N F LP +D + QI + + FLH+ K+ H +L P NI ++++ E Y
Sbjct: 110 ---NGF-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165
Query: 355 ---------HVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGST 405
+KV FG +T + T + APEV+
Sbjct: 166 RDERTLINPDIKVVDFGSATY----------DDEHHSTLVXXRHYRAPEVIL-------- 207
Query: 406 STSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVN 465
S+ DV+S G + E G F +++ ER L P PK+++
Sbjct: 208 -ALGWSQPCDVWSIGCILIEYYLGFTVF-----PTHDSKEHLAMMERILGP--LPKHMIQ 259
Query: 466 LTKK 469
T+K
Sbjct: 260 KTRK 263
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 42/179 (23%)
Query: 307 NSFSLPV--VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFH--------- 355
N P+ V + Q+ + ++FLH K+ H +L P NI E ++
Sbjct: 130 NYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERS 189
Query: 356 -----VKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKC 410
V+V FG +T + T + + APEV+ E
Sbjct: 190 VKSTAVRVVDFGSATF----------DHEHHSTIVSTRHYRAPEVILEL---------GW 230
Query: 411 SEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKK 469
S+ DV+S G + FE G F Q +++ ER L P P ++ T+K
Sbjct: 231 SQPCDVWSIGCIIFEYYVGFTLF-----QTHDNREHLAMMERILGP--IPSRMIRKTRK 282
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 278 EKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGE 337
+ K ++ME + L ++ S R S + ++ + Q+ R + F+H+ I H +
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGR--SIPMNLISIYIYQLFRAVGFIHSLGICHRD 166
Query: 338 LNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYIWYAPEVLA 397
+ P N+ + ++ +K+ FG +++ P+ P + + + APE++
Sbjct: 167 IKPQNLLVNSKDNT----LKLCDFG-------SAKKLIPSEPSVAXICSRF-YRAPELML 214
Query: 398 EQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQGDKMTKNIRAGERP 453
G+T + + D++S G + EL+ GK P G D++ + I+ P
Sbjct: 215 -----GAT---EYTPSIDLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQIMGTP 261
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 115/302 (38%), Gaps = 61/302 (20%)
Query: 235 WLGDSFVLRHFYGELES---LNAEISTMLSLSHPNIVQYLCG--FCDEEKKEFFLVMELM 289
W G+S ++ F E EI + L H NI+ ++ + +L+
Sbjct: 29 WHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYH 88
Query: 290 SKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQ--------KIYHGELNPS 341
+ +R + + + + + A G+ LH + I H +
Sbjct: 89 EHG------SLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 342 NIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASPQNQTAPNPYI----WYAPEVLA 397
N+ +K+ ++ GL+ + S NP + + APEVL
Sbjct: 143 NVLVKSN-----LQCCIADLGLAVMHSQGSDYL-------DIGNNPRVGTKRYMAPEVLD 190
Query: 398 EQEGTGSTSTSKCSEKADVYSFGMLCFEL-----LTGKV-----PFED---GHLQGDKMT 444
EQ T + K + D+++FG++ +E+ + G V PF D + M
Sbjct: 191 EQIRTDCFESYKWT---DIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMK 247
Query: 445 KNIRAGER-PLFP---SGSPKY--LVNLTKKCWHTNPSQRPSFSSICRILRYIKKFMANN 498
K + ++ P P + P L + ++CW+ NPS R + I + L+ I +N+
Sbjct: 248 KVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI----SNS 303
Query: 499 PD 500
P+
Sbjct: 304 PE 305
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 16/181 (8%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV- 313
E + L+H NIV+ + + L+ME C T N++ LP
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF----CPCGSLYTVLEEPSNAYGLPES 112
Query: 314 -VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
+ ++ + GM L I H + P NI ++ +G K++ FG + +
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-MRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ P+ Y E+ K D++S G+ + TG +P
Sbjct: 172 FVXLYGTEEYLHPDMY---------ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 433 F 433
F
Sbjct: 223 F 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 70/199 (35%), Gaps = 52/199 (26%)
Query: 281 EFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQKIYHGELNP 340
E ++V+E+ DL + ++ V I+ + G +F+H I H +L P
Sbjct: 106 ELYIVLEIADSDLKKLFKTPIFLTEQH------VKTILYNLLLGEKFIHESGIIHRDLKP 159
Query: 341 SNIYLKARSMEGYFHVKVSGFGLSTARTYAS-------------RNTPPASPQNQTAPNP 387
+N L VK+ FGL ART S P N+
Sbjct: 160 ANCLLNQDC-----SVKICDFGL--ARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQ 212
Query: 388 YI------WY-APEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGHLQG 440
WY APE++ QE ++ D++S G + ELL H+
Sbjct: 213 LTSHVVTRWYRAPELILLQENYTNS--------IDIWSTGCIFAELLN----MMKSHI-- 258
Query: 441 DKMTKNIRAGERPLFPSGS 459
N PLFP S
Sbjct: 259 -----NNPTNRFPLFPGSS 272
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+F+L V+ I +Q+ ME++H++ + + ++ P N + + + + + FGL A+
Sbjct: 93 TFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGL--AK 150
Query: 368 TY----ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
Y ++ P ++ T Y+ + EQ S + D+ + G +
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQ-----------SRRDDLEALGHMF 199
Query: 424 FELLTGKVPFE 434
L G +P++
Sbjct: 200 MYFLRGSLPWQ 210
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 16/181 (8%)
Query: 255 EISTMLSLSHPNIVQYLCGFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPV- 313
E + L+H NIV+ + + L+ME C T N++ LP
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF----CPCGSLYTVLEEPSNAYGLPES 112
Query: 314 -VVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASR 372
+ ++ + GM L I H + P NI ++ +G K++ FG + +
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-MRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 373 NTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVP 432
+ P+ Y E+ K D++S G+ + TG +P
Sbjct: 172 FVSLYGTEEYLHPDMY---------ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 433 F 433
F
Sbjct: 223 F 223
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 191 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE----------CQHLIRWCLA 240
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 241 LRPSDRPTFEEI 252
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 223 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE----------CQHLIRWCLA 272
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 273 LRPSDRPTFEEI 284
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 15/114 (13%)
Query: 320 QIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPASP 379
Q G+E+LH+++I HG++ N+ L + H + FG A +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLLSSDGS----HAALCDFG--HAVCLQPDGLGKSLL 246
Query: 380 QNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPF 433
P APEV+ + C K DV+S + +L G P+
Sbjct: 247 TGDYIPGTETHMAPEVVLGR---------SCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 223 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE----------CQHLIRWCLA 272
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 273 LRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 224 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE----------CQHLIRWCLA 273
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 274 LRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 224 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE----------CQHLIRWCLA 273
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 274 LRPSDRPTFEEI 285
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 308 SFSLPVVVDIMLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTAR 367
+FSL V+ I +Q+ ME++H++ + + ++ P N + + + + FGL A+
Sbjct: 101 TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGL--AK 158
Query: 368 TY----ASRNTPPASPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLC 423
Y ++ P ++ T Y+ + EQ S + D+ + G +
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQ-----------SRRDDLEALGHMF 207
Query: 424 FELLTGKVPFE 434
L G +P++
Sbjct: 208 MYFLRGSLPWQ 218
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 224 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE----------CQHLIRWCLA 273
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 274 LRPSDRPTFEEI 285
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 273 GFCDEEKKEFFLVMELMSKDLSCYMRETFGSRRRNSFSLPVVVDIMLQIARGMEFLHAQK 332
GF + K FLV+ + + L + ++ S V+ + ++ +EFLH +
Sbjct: 124 GFGVHQDKYRFLVLPSLGRSL----QSALDVSPKHVLSERSVLQVACRLLDALEFLHENE 179
Query: 333 IYHGELNPSNIYLKARSMEGYFHVKVSGFGLS 364
HG + NI++ E V ++G+G +
Sbjct: 180 YVHGNVTAENIFVDP---EDQSQVTLAGYGFA 208
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 223 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE----------CQHLIRWCLA 272
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 273 LRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 414 ADVYSFGMLCFELLTGKVPFE-DGHLQGDKMTKNIRAGERPLFPSGSPKYLVNLTKKCWH 472
A V+S G+L ++++ G +PFE D + G ++ R +L + C
Sbjct: 224 AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE----------CQHLIRWCLA 273
Query: 473 TNPSQRPSFSSI 484
PS RP+F I
Sbjct: 274 LRPSDRPTFEEI 285
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 184
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 185 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 235
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 236 DNYDQLVR 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 135 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 183
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 184 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 234
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 235 DNYDQLVR 242
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 185
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 186 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 236
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 237 DNYDQLVR 244
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 318 MLQIARGMEFLHAQKIYHGELNPSNIYLKARSMEGYFHVKVSGFGLSTARTYASRNTPPA 377
M +I + +++ H+ I H ++ P N+ M + H K+ A Y P
Sbjct: 136 MYEILKALDYCHSMGIMHRDVKPHNV------MIDHEHRKLRLIDWGLAEFYH-----PG 184
Query: 378 SPQNQTAPNPYIWYAPEVLAEQEGTGSTSTSKCSEKADVYSFGMLCFELLTGKVPFEDGH 437
N + Y + PE+L + + + D++S G + ++ K PF GH
Sbjct: 185 QEYNVRVASRY-FKGPELLVDYQMYDYS--------LDMWSLGCMLASMIFRKEPFFHGH 235
Query: 438 LQGDKMTK 445
D++ +
Sbjct: 236 DNYDQLVR 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,278,126
Number of Sequences: 62578
Number of extensions: 858362
Number of successful extensions: 3987
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 2221
Number of HSP's gapped (non-prelim): 1075
length of query: 811
length of database: 14,973,337
effective HSP length: 107
effective length of query: 704
effective length of database: 8,277,491
effective search space: 5827353664
effective search space used: 5827353664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)