Query 003543
Match_columns 811
No_of_seqs 297 out of 798
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 18:16:47 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003543.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1591-1594//hhsearch_pdb/003543hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hu3_A EIF4GII; heat repeat, t 1.0 1 1 438.6 21.2 242 194-478 7-260 (260)
2 2vso_E Eukaryotic initiation f 1.0 1 1 420.5 24.3 248 178-461 2-284 (284)
3 3rk6_A Polyadenylate-binding p 1.0 1 1 378.4 16.3 208 191-455 12-234 (234)
4 2i2o_A EIF4G-like protein; pro 1.0 1 1 343.1 11.6 197 208-465 10-214 (224)
5 2rg8_A Programmed cell death p 1.0 1 1 243.3 14.6 157 638-796 1-157 (165)
6 1ug3_A EIF4GI, eukaryotic prot 1.0 1 1 240.1 9.5 159 638-796 2-161 (339)
7 3eiq_C Programmed cell death p 1.0 1 1 234.3 10.3 136 642-782 212-348 (358)
8 2ion_A PDCD4, programmed cell 1.0 1 1 233.6 11.1 138 641-781 3-141 (152)
9 2zu6_B Programmed cell death p 1.0 1 1 228.3 9.8 136 641-781 160-296 (307)
10 2zu6_B Programmed cell death p 1.0 1 1 227.6 12.6 146 645-792 1-146 (307)
No 1
>1hu3_A EIF4GII; heat repeat, translation; 2.37A {Homo sapiens} SCOP: a.118.1.14
Probab=1.00 E-value=1 Score=438.60 Aligned_cols=242 Identities=40% Similarity=0.721 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 37899999999851379142899999998703886223334332210010358999999899998753224479799999
Q 003543 194 EKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKVTITHLECHNLLQVIIFLYSIFFLLKLRSLFAFQGVIELI 273 (811)
Q Consensus 194 ~~e~i~r~Vk~iLNKLTpenFd~l~~qL~~~~i~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~VI~lI 273 (811)
+.+++.|+|+||||||||+||+.|+.||++++|++.+.|+ +||.+|
T Consensus 7 ~~~~l~r~v~giLNKLT~~nf~~i~~ql~~~~i~~~~~l~----------------------------------~vi~~i 52 (260)
T 1hu3_A 7 KTQELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLK----------------------------------GVIDLV 52 (260)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHHHTTCCCCSHHHHH----------------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH----------------------------------HHHHHH
T ss_conf 7899999999998108879999999999976079999999----------------------------------999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHH-HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHCCCHHHH-
Q ss_conf 99963089853899999999863-1999999999995014899999999999841120179-------98605982799-
Q 003543 274 FDKAVLEPTFCPMYALLCSDLNE-KLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRA-------EIRQMTAPEQE- 344 (811)
Q Consensus 274 feKAi~Ep~fs~mYA~LC~~L~~-~l~~~~~~e~~gk~~~FRrlLLnrcQeeFe~~~~~~~-------ei~~l~~~e~E- 344 (811)
|+||+.||+||.|||+||..|+. .+|.+ +..+....||++||++||++|++.+.... +++....+++.
T Consensus 53 f~kA~~ep~f~~~YA~Lc~~L~~~~~p~~---~~~~~~~~Fr~~LL~rcq~eFe~~~~~~~~~~~~~~~~~~~~~~~e~~ 129 (260)
T 1hu3_A 53 FEKAIDEPSFSVAYANMCRCLVTLKVPMA---DKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERT 129 (260)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHTTCCCC------------CHHHHHHHHHHHHHHHHTC----------------------
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99987181179999999999997007755---577500389999999999998333211246777764420257878888
Q ss_pred -H--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf -7--8878999998754224788999982288878999999999860379999993339999999999855431398312
Q 003543 345 -M--ERMDQERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAEENVEAICQFFNTIGKQLDENPKSR 421 (811)
Q Consensus 345 -~--E~~d~e~~~Krr~LGnIrFIGELfk~~lL~e~Ii~~cI~~LL~~~~~~~p~Ee~IEcLc~LL~tiGk~Ld~~~k~~ 421 (811)
+ |..+.+.+.|+|++|||+||||||+++||+++|||+||..||++ |+|++|||+|.||++||+.|+. ++++
T Consensus 130 ~~~~e~ee~~~~~k~r~lg~i~FIgeLy~~~~l~~~i~~~~l~~Ll~~-----~~e~~iE~l~~lL~tvG~~L~~-~~~~ 203 (260)
T 1hu3_A 130 RLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKN-----HDEESLECLCRLLTTIGKDLDF-EKAK 203 (260)
T ss_dssp --------CCSSHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHS-----CSHHHHHHHHHHHHHHHHHHCC-TTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHC-CCCH
T ss_conf 766689999999999987399999999723799899999999998179-----9889999999999999998817-5547
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 229999999997761999886899999999999868997643236965488999999
Q 003543 422 RVNDVYFSRLKELTTNSQLVPRLRFMIHDVLDLRANNWVPRREEMKAKTITEIHSEA 478 (811)
Q Consensus 422 ~~mD~yF~rL~~l~~~~~lSsRIRFmI~dvIdLR~nnW~~r~~~~~pkti~eIh~Ea 478 (811)
..||.||.+|+.+..+.++|+|+||||+||+|||+|||++++.+.+||||+|||+||
T Consensus 204 ~~l~~~f~~l~~~~~~~~ls~Rirfmi~~l~dLR~~~W~~~~~~~~pkti~~i~~ea 260 (260)
T 1hu3_A 204 PRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPKTIEQIHKEA 260 (260)
T ss_dssp HHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHTTTCC-----------------
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 889999999999985799988999999999999986999885236997689997409
No 2
>2vso_E Eukaryotic initiation factor 4F subunit P150; acetylation, ATP-binding, phosphoprotein, protein biosynthesis, translation regulation; HET: AMP; 2.6A {Saccharomyces cerevisiae} PDB: 2vsx_E*
Probab=1.00 E-value=1 Score=420.50 Aligned_cols=248 Identities=30% Similarity=0.510 Sum_probs=201.5
Q ss_pred CCCCCCCCCCCCC-----------C---CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-----CCHHHHHHHHHH
Q ss_conf 1014687752358-----------9---99378999999998513791428999999987038-----862233343322
Q 003543 178 LIKAEVPWSARRG-----------N---LSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGI-----TTPDILKVTITH 238 (811)
Q Consensus 178 l~~~~~~w~~~~~-----------~---~~~~e~i~r~Vk~iLNKLTpenFd~l~~qL~~~~i-----~~~~~L~~~~~~ 238 (811)
|++++|+|+|+.. . ..+.+++.|+|+||||||||+||+.|+.||+.+++ .+.++|+
T Consensus 2 l~~s~~~w~P~~~~~~~~~~~~~~~~~~~~~~e~l~r~vkgiLNKLT~~nf~~i~~ql~~~~~~~~~~~~~~~l~----- 76 (284)
T 2vso_E 2 LVPSANRWVPKFKSKKTEKKLAPDGKTELLDKDEVERKMKSLLNKLTLEMFDAISSEILAIANISVWETNGETLK----- 76 (284)
T ss_dssp -----CCCCCC---------------CCCCCHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHGGGGCSBCHHHH-----
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH-----
T ss_conf 877788878804313532235888642104599999999999710887789999999999986502568389999-----
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CC--CHHHHH
Q ss_conf 100103589999998999987532244797999999996308985389999999986319999999999-95--014899
Q 003543 239 LECHNLLQVIIFLYSIFFLLKLRSLFAFQGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPG-GK--DITFKR 315 (811)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~VI~lIfeKAi~Ep~fs~mYA~LC~~L~~~l~~~~~~e~~-gk--~~~FRr 315 (811)
+||++||+||+.||+||.|||+||..|+..++....++.. ++ ...||+
T Consensus 77 -----------------------------~vi~~If~kA~~ep~fs~~YA~Lc~~l~~~l~~~i~~e~~~~k~g~~~Fr~ 127 (284)
T 2vso_E 77 -----------------------------AVIEQIFLKACDEPHWSSMYAQLCGKVVKELNPDITDETNEGKTGPKLVLH 127 (284)
T ss_dssp -----------------------------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSCTTCCBCC---CCTHHHHHH
T ss_pred -----------------------------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf -----------------------------999999999872721389999999999985686544444434310269999
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9999999998411201--79986059827997--8878999998754224788999982288878999999999860379
Q 003543 316 ILLNHCQEAFEGADNT--RAEIRQMTAPEQEM--ERMDQERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLENDG 391 (811)
Q Consensus 316 lLLnrcQeeFe~~~~~--~~ei~~l~~~e~E~--E~~d~e~~~Krr~LGnIrFIGELfk~~lL~e~Ii~~cI~~LL~~~~ 391 (811)
+||++||++|++.+.. ....+ ....+.|+ +..+++.+.|+|++|||+||||||+++|++++|||+||..||+..
T Consensus 128 ~LL~rcq~eFe~~~~~~~~~~~~-~~~~e~e~~~~e~~~~~~~k~r~lg~i~FIgeLyk~~~l~~~i~~~ci~~LL~~~- 205 (284)
T 2vso_E 128 YLVARCHAEFDKGWTDKLPTNED-GTPLEPEMMSEEYYAAASAKRRGLGLVRFIGFLYRLNLLTGKMMFECFRRLMKDL- 205 (284)
T ss_dssp HHHHHHHHHHHHCCCSSCC-------------CCTTHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-
T ss_conf 99999999982134431000114-4501255633689999999999760999999998646876899999999996167-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCC--------CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC-CCCC
Q ss_conf 9999933399999999998554313983--------12229999999997761999886899999999999868-9976
Q 003543 392 KTCPAEENVEAICQFFNTIGKQLDENPK--------SRRVNDVYFSRLKELTTNSQLVPRLRFMIHDVLDLRAN-NWVP 461 (811)
Q Consensus 392 ~~~p~Ee~IEcLc~LL~tiGk~Ld~~~k--------~~~~mD~yF~rL~~l~~~~~lSsRIRFmI~dvIdLR~n-nW~~ 461 (811)
...|+|++|||+|+||+|||+.|++... ++..||.||.+|+.+..+.++|+||||||+||+|||+| ||++
T Consensus 206 ~~~p~e~~iE~l~~lL~tvG~~Ld~~~~~~~~~~~~~~~~md~~f~~l~~l~~~~~ls~RirFml~dlidLR~n~~W~~ 284 (284)
T 2vso_E 206 TDSPSEETLESVVELLNTVGEQFETDSFRTGQATLEGSQLLDSLFGILDNIIQTAKISSRIKFKLIDIKELRHDKNWNS 284 (284)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHHTSCC--------CHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHTSTTC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 8999889999999999999998826631011221023789999999999987478998999999999999850269999
No 3
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP, EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=378.38 Aligned_cols=208 Identities=23% Similarity=0.413 Sum_probs=182.6
Q ss_pred CCCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHC---CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99937899999999851379--14289999999870---38862233343322100103589999998999987532244
Q 003543 191 NLSEKDRVLKTVKGILNKLT--PEKFDVLKGQLIDS---GITTPDILKVTITHLECHNLLQVIIFLYSIFFLLKLRSLFA 265 (811)
Q Consensus 191 ~~~~~e~i~r~Vk~iLNKLT--penFd~l~~qL~~~---~i~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (811)
..+..+.+.|+|++|||||| |+||+.++.||+++ ++++.+.|+
T Consensus 12 ~~~~~~~l~r~v~~iLNkLT~~p~~f~~l~~~i~~~~~~~~~~~~~L~-------------------------------- 59 (234)
T 3rk6_A 12 QMGRGSTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQ-------------------------------- 59 (234)
T ss_dssp ------CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCSHHHHH--------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH--------------------------------
T ss_conf 655529999999999997468865189999999999843799899999--------------------------------
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 79799999999630898538999999998631999999999995014899999999999841120179986059827997
Q 003543 266 FQGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRAEIRQMTAPEQEM 345 (811)
Q Consensus 266 l~~VI~lIfeKAi~Ep~fs~mYA~LC~~L~~~l~~~~~~e~~gk~~~FRrlLLnrcQeeFe~~~~~~~ei~~l~~~e~E~ 345 (811)
+||++||+||++||+||+|||+||.+|+..++.++ ...+||++||++||++|++.+++.+ .+
T Consensus 60 --~vi~lIfekAi~ep~fs~~YA~LC~~l~~~l~~~~------~~~~Fr~lLL~rcQ~eFe~~~~~~~-------~d--- 121 (234)
T 3rk6_A 60 --ELVELIYQQATSIPNFSYMGARLCNYLSHHLTISP------QSGNFRQLLLQRCRTEYEVKDQAAK-------GD--- 121 (234)
T ss_dssp --HHHHHHHHHHHSSTTCHHHHHHHHHHHHHHCCCCC------TTCCHHHHHHHHHHHHHTTHHHHTS-------SC---
T ss_pred --HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHHHHHHHHH-------CC---
T ss_conf --99999999998681328999999999998668997------4317999999999999986677642-------10---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88789999987542247889999822--------8887899999999986037999999333999999999985543139
Q 003543 346 ERMDQERLVKLRTLGNIRLIGELLKQ--------KMVPEKIVHHIVQELLENDGKTCPAEENVEAICQFFNTIGKQLDEN 417 (811)
Q Consensus 346 E~~d~e~~~Krr~LGnIrFIGELfk~--------~lL~e~Ii~~cI~~LL~~~~~~~p~Ee~IEcLc~LL~tiGk~Ld~~ 417 (811)
.++|+|++|||+||||||++ +|++++|||.|+.+||.... ..|+|++|||+|+||+|||+.||+.
T Consensus 122 ------~~~k~r~lg~i~FIgELf~~l~~~~~~~~~l~e~I~~~ci~~Ll~~l~-~~p~ee~vE~l~~lL~tvG~~Ld~~ 194 (234)
T 3rk6_A 122 ------EVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALF-SNPMDDNLICAVKLLKLTGSVLEDA 194 (234)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHCCEECTTSSEECCHHHHHHHHHHHHHHH-HSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf ------999899999999999998453024552200179999999999987514-7998488999999999999998600
Q ss_pred --CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf --83122299999999977619998868999999999998
Q 003543 418 --PKSRRVNDVYFSRLKELTTNSQLVPRLRFMIHDVLDLR 455 (811)
Q Consensus 418 --~k~~~~mD~yF~rL~~l~~~~~lSsRIRFmI~dvIdLR 455 (811)
++++..||.||++|+.+..++++|+||||||+||||||
T Consensus 195 ~~~~~~~~md~~f~rl~~i~~~~~ls~Rirfml~dlieLR 234 (234)
T 3rk6_A 195 WKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELR 234 (234)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
T ss_conf 1332378899999999999857899988999999999759
No 4
>2i2o_A EIF4G-like protein; protein structure initiative, PSI, cente eukaryotic structural genomics, CESG, structural genomics, function; HET: MSE; 1.92A {Danio rerio}
Probab=1.00 E-value=1 Score=343.10 Aligned_cols=197 Identities=20% Similarity=0.361 Sum_probs=160.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 37914289999999870388622333433221001035899999989999875322447979999999963089853899
Q 003543 208 KLTPEKFDVLKGQLIDSGITTPDILKVTITHLECHNLLQVIIFLYSIFFLLKLRSLFAFQGVIELIFDKAVLEPTFCPMY 287 (811)
Q Consensus 208 KLTpenFd~l~~qL~~~~i~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~VI~lIfeKAi~Ep~fs~mY 287 (811)
..+.++|+..+.+++...+..+... .+++||++||+||++||+||.||
T Consensus 10 ~~~i~~f~~~~q~ll~~~~~~~~~~--------------------------------~l~~vi~lIfeKAi~ep~fs~~Y 57 (224)
T 2i2o_A 10 DYKIQSFDLETQKLLKTALKDPGSV--------------------------------DLEKVSSVIVDQSLKDQVFSREA 57 (224)
T ss_dssp CCCCTTSCHHHHHHHHHHHHCGGGS--------------------------------CHHHHHHHHHHHHTTCHHHHHHT
T ss_pred CCCHHCCCHHHHHHHHHHHCCCCHH--------------------------------HHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 5542006999999999987499777--------------------------------79999999999997285229999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999986319999999999950148999999999998411201799860598279978878999998754224788999
Q 003543 288 ALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRAEIRQMTAPEQEMERMDQERLVKLRTLGNIRLIGE 367 (811)
Q Consensus 288 A~LC~~L~~~l~~~~~~e~~gk~~~FRrlLLnrcQeeFe~~~~~~~ei~~l~~~e~E~E~~d~e~~~Krr~LGnIrFIGE 367 (811)
|+||.+|...... +. |+ ..||++||++||++|++.++. +...|+|++|||+||||
T Consensus 58 A~LC~~L~~~~~~----~~-g~-~~Fr~~LLn~cQ~eFe~~ee~-------------------~~~~k~r~lG~i~FIgE 112 (224)
T 2i2o_A 58 GRICYTIVQAEAK----QT-NG-SVFRRNLLNRLQQEFKAREET-------------------RKRSTQEWVCLVSFICN 112 (224)
T ss_dssp HHHHHHHHHHHHH----HH-SC-CHHHHHHHHHHHHHHHTHHHH-------------------HHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC----CC-CC-HHHHHHHHHHHHHHHHCHHHH-------------------HHHHHHHHHHHHHHHHH
T ss_conf 9999999987064----42-00-589999999999998775999-------------------99988888689999999
Q ss_pred HHHC----CC--CC-HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-HHHCCC
Q ss_conf 9822----88--87-8999999999860379999993339999999999855431398312229999999997-761999
Q 003543 368 LLKQ----KM--VP-EKIVHHIVQELLENDGKTCPAEENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKE-LTTNSQ 439 (811)
Q Consensus 368 Lfk~----~l--L~-e~Ii~~cI~~LL~~~~~~~p~Ee~IEcLc~LL~tiGk~Ld~~~k~~~~mD~yF~rL~~-l~~~~~ 439 (811)
||++ +| ++ ++|||.|+..||+.. ..|+|++|||+|+||+|||+.||...+ ..||.||.+|+. +.++++
T Consensus 113 Lf~~l~~~~~~~~~l~~i~~~cl~~Ll~~~--~~p~Ee~lEcl~~LL~tvG~~Ld~~~~--~~md~~f~~l~~~l~~~~~ 188 (224)
T 2i2o_A 113 IFDYLKVNNMPMVALVHPVYDCLFRLAQSD--ALKNEEEVDCLVLQLHRIGDQLEKMNV--QLMDELFNLLRDGFLLQED 188 (224)
T ss_dssp HHHHSCBTTBCCGGGHHHHHHHHHHHTSHH--HHTSHHHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHCCCC
T ss_conf 996752068604789999999999986467--999889999999999999899870568--9999999999999861769
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88689999999999986899764323
Q 003543 440 LVPRLRFMIHDVLDLRANNWVPRREE 465 (811)
Q Consensus 440 lSsRIRFmI~dvIdLR~nnW~~r~~~ 465 (811)
+|+|+||||+||||||+|||++++..
T Consensus 189 ls~RiRfml~dlieLR~~~W~~~~~~ 214 (224)
T 2i2o_A 189 LSSMGRLLLLEILEFRAGGWKLSDTA 214 (224)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCCHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99899999999999998799997224
No 5
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=1.00 E-value=1 Score=243.29 Aligned_cols=157 Identities=21% Similarity=0.221 Sum_probs=142.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999999999999999618999999999997079998278999999998237997758899999998848987988
Q 003543 638 VTKLNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTR 717 (811)
Q Consensus 638 ~~~ls~EEl~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~~~~rElvskLL~~L~~~~ils~~ 717 (811)
.|.+|+|+++|+++++|+|||+++|++||+.||+||++|.||+.||+.+|+++||+++.+||++++||++|+. ++++++
T Consensus 1 ~p~~s~ee~~kk~~~ii~EYf~~~D~~Ea~~~l~eL~~p~~~~~~V~~~I~~aldrk~~ere~~s~LL~~L~~-~~ls~~ 79 (165)
T 2rg8_A 1 GLPLDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCG-TVMSTT 79 (165)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTCSGGGGHHHHHHHHHHHTSCHHHHHHHHHHHHHHBT-TTBCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-CCCCHH
T ss_conf 9999999999999999999984899999999999847952189999999999975888999999999999988-799999
Q ss_pred HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 9999999983034112137895247999999999981988969899998510231589999999999973397712567
Q 003543 718 DIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSIFTAAMKSIQSSPAGQEVL 796 (811)
Q Consensus 718 ql~~Gf~~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~~~i~~~~~~i~d~~~~~~~l~~~l~~l~~~~~g~~v~ 796 (811)
||.+||..+++.+||++||+|+||+++|+|+||+|.++++|++|+.++..+.++. ..++++..+-..|+...++..|.
T Consensus 80 ~i~~Gf~~lle~ldDl~iDiP~a~~~la~fiarav~d~~l~~~~l~~~~~~~~~~-~~~~~l~~a~~ll~~~~~~~~~~ 157 (165)
T 2rg8_A 80 DVEKSFDKLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV-QARAALDKATVLLSMSKGGKRKD 157 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHTTSSCTTHHHHTTTTCCCH-HHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9999999999767563546542699999999999982899999999888455746-89999999999870542089997
No 6
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=1.00 E-value=1 Score=240.14 Aligned_cols=159 Identities=25% Similarity=0.312 Sum_probs=149.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999999999999999618999999999997079998278999999998237997758899999998848987988
Q 003543 638 VTKLNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTR 717 (811)
Q Consensus 638 ~~~ls~EEl~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~~~~rElvskLL~~L~~~~ils~~ 717 (811)
++.+|+|+++++++++|+|||+++|++||++|++||++|+|||+||+.+|+.+||+++.+|+++++||++|+.++++|.+
T Consensus 2 k~~~s~ee~~k~~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~ 81 (339)
T 1ug3_A 2 KAALSEEELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTA 81 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999999999999999858999999999997589520899999999999589889999999999999987999999
Q ss_pred HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 999999998303411213789524799999999998198896-9899998510231589999999999973397712567
Q 003543 718 DIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDF-IVLKEVLKKVEDNMFRRSIFTAAMKSIQSSPAGQEVL 796 (811)
Q Consensus 718 ql~~Gf~~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~-~~i~~~~~~i~d~~~~~~~l~~~l~~l~~~~~g~~v~ 796 (811)
||.+||.++++.++|+.+|+|+||.+||.|+++++.+|++|+ +++..+.+.+.+.|.+..|+.++++.+....+.+++.
T Consensus 82 ~~~~Gf~~~~~~l~Dl~lDiP~a~~~La~~v~~~i~~g~l~~~~l~~~~~~~l~~~g~~~~fl~~vl~~l~~~~g~~~l~ 161 (339)
T 1ug3_A 82 QYYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEGGVPMGELFREITKPLRPLGKAASLLLEILGLLCKSMGPKKVG 161 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHGGGGSTTSCCHHHHHHHHTTTHHHHTCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 99999999983473740373634999999999999879988899999998763203619999999999999972899999
No 7
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=1.00 E-value=1 Score=234.32 Aligned_cols=136 Identities=24% Similarity=0.338 Sum_probs=127.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99999999999999996189999999999970799982789999999982379-97758899999998848987988999
Q 003543 642 NLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKI-PPCVEPVIQLLEFLLNKNVLTTRDIG 720 (811)
Q Consensus 642 s~EEl~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~-~~~rElvskLL~~L~~~~ils~~ql~ 720 (811)
+.++++|+++++|+|||+++|++||++||+||++|+|||+||+.+|+++||++ +.+|+++++||.+|+.+++||.+||.
T Consensus 212 ~veelkkki~~lL~EY~~s~D~~EA~~ci~EL~~p~fhhe~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~ 291 (358)
T 3eiq_C 212 PVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMK 291 (358)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 09999999999998744489889999999980687440999999999997267647899999999999877997999999
Q ss_pred HHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999830341121378952479999999999819889698999985102315899999999
Q 003543 721 TGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSIFTAA 782 (811)
Q Consensus 721 ~Gf~~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~~~i~~~~~~i~d~~~~~~~l~~~ 782 (811)
+||.++++.++||+||+|+||++||+|+++||.+|+|++.|+... +...|++|+++-
T Consensus 292 ~Gf~~vl~~ldDl~lDiP~A~~~la~~varai~~g~l~~~f~~~~-----p~r~rkr~~se~ 348 (358)
T 3eiq_C 292 RGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLC-----PSRGRKRFVSEG 348 (358)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTSSCHHHHTTC-----CCC---------
T ss_pred HHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHC-----CCCCCCCCCCCC
T ss_conf 999999975507412654289999999999998799789999767-----666772512268
No 8
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=1.00 E-value=1 Score=233.64 Aligned_cols=138 Identities=23% Similarity=0.326 Sum_probs=131.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 999999999999999996189999999999970799982789999999982379-9775889999999884898798899
Q 003543 641 LNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKI-PPCVEPVIQLLEFLLNKNVLTTRDI 719 (811)
Q Consensus 641 ls~EEl~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~-~~~rElvskLL~~L~~~~ils~~ql 719 (811)
.+.++++++++++|+|||+++|++||++||+||++|+|||+||+.+|+++||++ +.+|+++++||.+|+.+++||.+||
T Consensus 3 ~~~eel~kki~~lL~EY~~~~D~~EA~~cl~EL~~p~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~ 82 (152)
T 2ion_A 3 QPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 82 (152)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 84999999999999999807999999999997088723699999999999857986899999999999988799699999
Q ss_pred HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999983034112137895247999999999981988969899998510231589999999
Q 003543 720 GTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSIFTA 781 (811)
Q Consensus 720 ~~Gf~~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~~~i~~~~~~i~d~~~~~~~l~~ 781 (811)
.+||.++++.|+||+||+|+||++||+|++++|.+|+|+++|+..+ ..++ .+|++|+++
T Consensus 83 ~~Gf~~vl~~ldDl~lDiP~A~~~la~~v~~ai~~g~l~~~~~~~~--p~~~-~~rk~f~s~ 141 (152)
T 2ion_A 83 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLC--PSRS-RGRKRFVSE 141 (152)
T ss_dssp HHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTCSCHHHHHTC--TTC-----------
T ss_pred HHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHC--CCCC-CCHHHHCCC
T ss_conf 9999999975817404733669999999999999799899999728--8743-003210246
No 9
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=1.00 E-value=1 Score=228.29 Aligned_cols=136 Identities=24% Similarity=0.334 Sum_probs=129.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 999999999999999996189999999999970799982789999999982379-9775889999999884898798899
Q 003543 641 LNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKI-PPCVEPVIQLLEFLLNKNVLTTRDI 719 (811)
Q Consensus 641 ls~EEl~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~-~~~rElvskLL~~L~~~~ils~~ql 719 (811)
+++++++++++++|+|||+++|++||++||+||+.|+|||+||+.+|+++||++ +.+|+++++||.+|++++++|.+||
T Consensus 160 ~~~eelkkki~~lL~EY~~~~D~~EA~~ci~EL~~p~f~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~ 239 (307)
T 2zu6_B 160 QSVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQM 239 (307)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 88999999999999999828989999999998189734699999999999746872789999999999987799799999
Q ss_pred HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999983034112137895247999999999981988969899998510231589999999
Q 003543 720 GTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSIFTA 781 (811)
Q Consensus 720 ~~Gf~~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~~~i~~~~~~i~d~~~~~~~l~~ 781 (811)
.+||.++++.++|++||+|+||+++++|+++||.+|+|+++++..+ +...+++|+++
T Consensus 240 ~~Gf~~vl~~l~Dl~lDiP~A~~~la~~v~~ai~~g~l~~~~~~~~-----~~~~rkrf~se 296 (307)
T 2zu6_B 240 KRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLC-----PSRGRKRFVSE 296 (307)
T ss_dssp HHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTSSCHHHHHTS-----CCC--------
T ss_pred HHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHC-----CCCCCCCCCCC
T ss_conf 9999999975637422622289999999999998799789999737-----76566430256
No 10
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=1.00 E-value=1 Score=227.64 Aligned_cols=146 Identities=22% Similarity=0.251 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 99999999999996189999999999970799982789999999982379977588999999988489879889999999
Q 003543 645 DLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTRDIGTGCL 724 (811)
Q Consensus 645 El~kki~sil~EY~~~~D~~EA~~cikEL~~P~~~~evV~~~I~~aLEk~~~~rElvskLL~~L~~~~ils~~ql~~Gf~ 724 (811)
|++|+++++|+|||+++|++||+.|++||++|.||+.||+.+|+++||+++.+||++++||++|+. ++++++||.+||.
T Consensus 1 e~~k~~~~ii~EYf~~~d~~Ea~~~l~el~~p~~~~~~v~~~i~~aldr~~~erE~~s~LLs~L~~-~~ls~~~i~~gf~ 79 (307)
T 2zu6_B 1 AFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCG-TVMSTTDVEKSFD 79 (307)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHTTCCGGGGGGHHHHHHHHHHTSCHHHHHHHHHHHHHHHH-HTBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-CCCCHHHHHHHHH
T ss_conf 968899999999982899999999999808950089999999999867988999999999999984-7899999999999
Q ss_pred HHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98303411213789524799999999998198896989999851023158999999999997339771
Q 003543 725 LYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSIFTAAMKSIQSSPAG 792 (811)
Q Consensus 725 ~vle~LdDl~iDiP~A~~~La~fiaraI~dg~l~~~~i~~~~~~i~d~~~~~~~l~~~l~~l~~~~~g 792 (811)
.+++.++|+++|+|+||+++|.|+||+|.|+++|++|+.+...+.++. ..++++..+...|+...++
T Consensus 80 ~ll~~ldDl~lD~P~a~~~la~flaraV~d~~l~~~~l~~~~~~~~~~-~g~~~l~~a~~~l~~~~~~ 146 (307)
T 2zu6_B 80 KLLKDLPELALDTPRAPQLVGQFIARAVGDGILCNTYIDSYKGTVDCV-QARAALDKATVLLSMSKGG 146 (307)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHTTSSCTTTTGGGTTTCCCH-HHHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH-HHHHHHHHHHHHHCCCCCH
T ss_conf 999865574314524499999999999995788889998887223535-8999999999985255307
Done!